Stabilized SARS-CoV-2 Spike Protein Fusion Mutations

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Solution Overview

Problem

Current vaccines and treatments for COVID-19 lack effectiveness due to the instability and variability of SARS-CoV-2 spike proteins, which complicates the induction of robust and neutralizing antibodies, and there is an urgent need for stabilized pre-fusion SARS-CoV-2 S proteins for improved vaccine design and immune response.

Innovation Solution

Development of recombinant SARS-CoV-2 S proteins with specific mutations and disulfide bridges that enhance thermal stability and trimer yields, maintaining the pre-fusion conformation, and nucleic acid molecules encoding these proteins for use in vaccines and immunization.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If wild-type SARS-CoV-2 spike protein is used in vaccines, then the vaccine can be produced, but the protein instability and variability reduce antibody induction effectiveness

Engineering Contradiction:
Improveprotein stabilityVSAvoidvaccine effectiveness
Core Design Contradiction:
ReliabilityVSProductivity

Solution Approach 1:

The patent introduces specific amino acid mutations (e.g., N501Y, D614G, P681H, L617F) and disulfide bridge formations to alter the structural parameters of the spike protein, thereby enhancing its thermal stability and conformational consistency while maintaining immunogenicity

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

The stabilized spike protein is constructed as a composite structure incorporating multiple stabilizing elements (mutations and disulfide bridges) within a single protein molecule, creating a hybrid structure that combines the original viral antigenicity with enhanced structural rigidity

Inventive Principle:
Principle #40Composite materials

2Stability of the object's composition

If spike protein mutations are introduced to stabilize the protein, then thermal stability and trimer yields improve, but the protein sequence deviates from the wild-type virus

Engineering Contradiction:
Improvethermal stabilityVSAvoidsequence variability
Core Design Contradiction:
Stability of the object's compositionVSAdaptability or versatility

Solution Approach 1:

The patent applies stabilizing mutations and disulfide bridges at specific localized regions of the spike protein (such as the hinge region and subunit interfaces) rather than throughout the entire sequence, thereby improving stability while preserving overall sequence similarity to the wild-type virus

Inventive Principle:
Principle #3Local quality

3Reliability

If the spike protein is stabilized in pre-fusion conformation, then antibody neutralization effectiveness increases, but the protein becomes more resistant to conformational changes needed for fusion

Engineering Contradiction:
Improveconformational stabilityVSAvoidfusion capability
Core Design Contradiction:
ReliabilityVSObject-generated harmful factors

Solution Approach 1:

The spike protein is engineered to be pre-stabilized in the pre-fusion conformation before interaction with the host cell, ensuring that the antigen presented to the immune system is in the correct immunogenic state, while the fusion function remains intact for viral entry

Inventive Principle:
Principle #10Preliminary action

Data Source

PatentUS20240189416A1Stabilized coronavirus spike protein fusion proteins
Publication Date: 2024.06.13 JANSSEN PHARMACEUTICALS INC
  • US20240189416A1 patent drawing
  • US20240189416A1 patent drawing
  • US20240189416A1 patent drawing

AI summary

The present invention provides stabilized recombinant pre-fusion SARS COV-2 S proteins, nucleic acids molecules encoding the SARS-COV-2 S proteins and uses thereof.