Suppressor tRNA Anticodon Mutation for Premature Stop Codon Readthrough

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Solution Overview

Problem

Current methods are inadequate for effectively addressing premature stop codons in genes, which lead to truncated and nonfunctional proteins, causing various genetic disorders such as Dravet Syndrome.

Innovation Solution

Introducing an expression vector capable of expressing a tRNA with an anticodon that hybridizes to premature stop codons, allowing amino acid incorporation and extension of the protein sequence, thereby producing a functional gene product.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If a premature stop codon is present in a gene, then protein synthesis terminates early producing a truncated protein, but the protein becomes nonfunctional or less functional

Engineering Contradiction:
Improveprotein functionalityVSAvoidprotein length
Core Design Contradiction:
ReliabilityVSLength of moving object

Solution Approach 1:

The patent introduces a suppressor tRNA as an intermediary molecule that mediates between the premature stop codon and the amino acid incorporation machinery. This tRNA contains a mutated anticodon that specifically recognizes and binds to the premature stop codon sequence, allowing the ribosome to continue translation and incorporate amino acids beyond the premature stop site, thereby restoring full-length functional protein production

Inventive Principle:
Principle #24Intermediary (Mediator)

Solution Approach 2:

The patent applies parameter changes by mutating the anticodon sequence of the tRNA to match the specific premature stop codon sequence. This parameter modification allows the tRNA to recognize and bind to the premature stop codon instead of causing termination, enabling readthrough and production of full-length protein

Inventive Principle:
Principle #35Parameter changes

2Reliability

If current methods are used to address premature stop codons, then treatment options are limited, but effective treatment outcomes cannot be achieved

Engineering Contradiction:
Improvetreatment effectivenessVSAvoidmethod availability
Core Design Contradiction:
ReliabilityVSAdaptability or versatility

Solution Approach 1:

The patent segments the treatment approach by designing specific suppressor tRNAs tailored to individual premature stop codon mutations. Each tRNA is customized with an anticodon matching the specific mutant stop codon sequence, allowing targeted treatment of different nonsense mutations causing various genetic disorders including Dravet Syndrome

Inventive Principle:
Principle #1Segmentation

Solution Approach 2:

The patent establishes a universal therapeutic platform where suppressor tRNAs can be applied to treat multiple different genetic disorders caused by various premature stop codon mutations. The same general mechanism (suppressor tRNA delivery) can address different diseases such as Dravet Syndrome, cystic fibrosis, and other nonsense mutation-related disorders

Inventive Principle:
Principle #6Universality (Multi-functionality)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

This approach increases the production of functional gene products, enhancing protein activity and improving treatment outcomes for disorders mediated by premature stop codons, including Dravet Syndrome.

Implementation Method 1

comprises an anticodon that hybridizes to the premature stop codon

Methodology Applied
Scientific EffectHybridization:

Data Source

PatentUS11617802B2Methods and compositions for treating a premature stop codon-mediated disorder
Publication Date: 2023.04.04 CASE WESTERN RESERVE UNIV
  • US11617802B2 patent drawing
  • US11617802B2 patent drawing
  • US11617802B2 patent drawing

AI summary

Modified tRNAs can be used to express in a mammalian cell a functional gene product encoded by a gene containing a premature stop codon and/or to treat a disease mediated by a premature stop codon.