Synthetic-Backbone Oligonucleotides for Targeted Cellular Delivery

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Solution Overview

Problem

Existing delivery methods for therapeutic, prophylactic, or diagnostic compounds often result in unintended consequences due to off-target effects, necessitating improved localization and efficiency of compound delivery to specific cellular targets.

Innovation Solution

Development of modified oligonucleotides with specific backbones and chemical modifications, such as those represented by Formulas (I) to (XVIII), which can be administered with targeting ligands to enhance localization and modulate target nucleic acids or proteins, thereby treating diseases and disorders.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If conventional delivery methods are used for therapeutic compounds, then the compounds can be administered to subjects, but off-target effects occur and localization to specific locations is poor

Engineering Contradiction:
Improvedelivery specificityVSAvoidoff-target effects
Core Design Contradiction:
ReliabilityVSObject-affected harmful factors

Solution Approach 1:

The patent employs targeting ligands as intermediary molecules that mediate between the therapeutic oligonucleotide and the target cell. These ligands bind to specific receptors on the cell surface, facilitating selective delivery of the oligonucleotide to the desired location while preventing off-target effects through receptor specificity.

Inventive Principle:
Principle #24Intermediary (Mediator)

Solution Approach 2:

The patent applies local quality by modifying the oligonucleotide with location-specific targeting ligands that confer different localization properties to different oligonucleotide molecules. This allows specific regions of the body (such as the brain) to be targeted preferentially, improving delivery specificity to the intended target location.

Inventive Principle:
Principle #3Local quality

2Productivity

If oligonucleotides are delivered to modulate target nucleic acids, then gene expression can be changed, but the delivery efficiency to specific cellular targets is insufficient

Engineering Contradiction:
Improvedelivery efficiencyVSAvoidtarget localization
Core Design Contradiction:
ProductivityVSReliability

Solution Approach 1:

Targeting ligands serve as intermediaries that enhance delivery efficiency by mediating the interaction between the oligonucleotide and target cells. The ligands bind to cell surface receptors, facilitating efficient uptake of the oligonucleotide into the target cell while maintaining high target localization specificity.

Inventive Principle:
Principle #24Intermediary (Mediator)

Solution Approach 2:

The patent modifies the chemical parameters of the oligonucleotide by incorporating different targeting ligands that change the delivery characteristics. These parameter changes in the oligonucleotide structure enable optimized delivery efficiency to specific cellular targets while maintaining localization accuracy.

Inventive Principle:
Principle #35Parameter changes

3Reliability

If chemical modifications are made to oligonucleotides to improve delivery, then therapeutic outcomes can be enhanced, but the synthesis complexity increases

Engineering Contradiction:
Improvetherapeutic efficacyVSAvoidsynthesis complexity
Core Design Contradiction:
ReliabilityVSDevice complexity

Solution Approach 1:

The patent applies segmentation by dividing the oligonucleotide modification process into separate steps: first synthesizing the core oligonucleotide sequence, then separately incorporating targeting ligands at specific positions. This segmentation allows for modular assembly, reducing overall synthesis complexity while maintaining therapeutic efficacy through precise chemical modifications.

Inventive Principle:
Principle #1Segmentation

Solution Approach 2:

The patent creates composite oligonucleotide structures by combining the core nucleic acid sequence with chemically modified regions and attached targeting ligands. These composite materials integrate multiple functional elements (therapeutic sequence + delivery moieties) into a single molecule, enhancing therapeutic outcomes while managing synthesis complexity through standardized conjugation methods.

Inventive Principle:
Principle #40Composite materials

Data Source

PatentUS20250312367A1Oligonucleotides having a synthetic backbone and synthesis thereof
Publication Date: 2025.10.09 ADARX PHARMACEUTICALS INC
  • US20250312367A1 patent drawing
  • US20250312367A1 patent drawing
  • US20250312367A1 patent drawing

AI summary

Provided herein are oligonucleotide-containing compounds, methods of delivering the compounds, and methods of treating diseases, disorders, and symptoms (e.g., central nervous system diseases, disorders, and symptoms) in a subject using the compounds.