TALE-nuclease T-cell Gene Editing for Immunotherapy

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Solution Overview

Problem

Current immunotherapy approaches face challenges in effectively activating T-cells for cancer treatment due to immune checkpoint proteins, which limit T-cell activity and are associated with adverse events when using antibody treatments, and there is a need for more efficient methods to inactivate multiple immune checkpoint genes in T-cells for enhanced therapeutic efficacy.

Innovation Solution

The use of specific TALE-nucleases to precisely target and inactivate multiple immune checkpoint genes, such as PD1 and CTLA-4, in T-cells, allowing for the generation of highly active T-cells that can be used for immunotherapy by introducing rare-cutting endonucleases to create double mutants, thereby enhancing T-cell activity and reducing adverse events.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If antibody treatments are used to block immune checkpoints, then T-cell activity is improved, but adverse events increase

Engineering Contradiction:
ImproveT-cell activityVSAvoidadverse events
Core Design Contradiction:
ReliabilityVSObject-affected harmful factors

Solution Approach 1:

The patent extracts the immune checkpoint proteins (PD-1, CTLA-4) from the T-cell surface by using TALE-nucleases to create double-strand breaks in their encoding genes. This permanent genetic modification removes the harmful inhibitory molecules from the T-cell, eliminating the need for external antibody treatments and their associated adverse events while maintaining enhanced T-cell activity.

Inventive Principle:
Principle #2Taking out (Extraction)

Solution Approach 2:

The patent performs preliminary genetic modification of T-cells ex vivo by introducing TALE-nucleases that target and inactivate immune checkpoint genes before the T-cells are deployed for therapy. This preliminary action of gene inactivation prevents the harmful effects of immune checkpoints from manifesting during therapy, avoiding adverse events while preserving T-cell functionality.

Inventive Principle:
Principle #10Preliminary action

2Reliability

If multiple immune checkpoint genes are inactivated in T-cells, then T-cell activity is enhanced, but the complexity of genetic modification increases

Engineering Contradiction:
ImproveT-cell activityVSAvoidgenetic modification complexity
Core Design Contradiction:
ReliabilityVSDevice complexity

Solution Approach 1:

The patent merges the functions of multiple TALE-nucleases into a single delivery system using lentiviral vectors. Each vector construct contains the TALE-nuclease protein and its corresponding guide RNA, allowing simultaneous targeting of multiple genes (PD-1 and CTLA-4) through a unified genetic modification approach rather than separate procedures.

Inventive Principle:
Principle #5Merging (Combining)

Solution Approach 2:

The patent uses lentiviral vectors as intermediaries to deliver TALE-nucleases and guide RNAs into T-cells. This intermediary system simplifies the genetic modification process by providing a standardized, efficient method for introducing multiple gene-targeting components simultaneously, reducing the overall complexity compared to direct gene editing approaches.

Inventive Principle:
Principle #24Intermediary (Mediator)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

This method enables the production of highly active T-cells that can effectively target tumor cells or infected cells, potentially leading to improved cancer treatment outcomes with reduced adverse effects by specifically modifying T-cells to inactivate immune checkpoint genes, enhancing their therapeutic potential for immunotherapy.

Implementation Method 1

The use of specific rare cutting endonucleases, in particular TALE-nucleases (TAL effector endonuclease), to precisely target a selection of key genes in T-cells

Methodology Applied
Scientific EffectEndonuclease cleavage: Enzyme

Data Source

PatentUS11311575B2Methods for engineering highly active T cell for immunotherapy
Publication Date: 2022.04.26 CELLECTIS SA
  • US11311575B2 patent drawing
  • US11311575B2 patent drawing
  • US11311575B2 patent drawing

AI summary

The present invention relates to methods for developing engineered T-cells for immunotherapy and more specifically to methods for modifying T-cells by inactivating at immune checkpoint genes, preferably at least two selected from different pathways, to increase T-cell immune activity. This method involves the use of specific rare cutting endonucleases, in particular TALE-nucleases (TAL effector endonuclease) and polynucleotides encoding such polypeptides, to precisely target a selection of key genes in T-cells, which are available from donors or from culture of primary cells. The invention opens the way to highly efficient adoptive immunotherapy strategies for treating cancer and viral infections.