TIGIT-TGF-β Fusion Protein Variants for Cleavage-Stable Binding

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Solution Overview

Problem

Current fusion proteins containing TGF-βRII extracellular region fragments are unstable due to cleavage and degradation issues, affecting their purity and quality uniformity, which poses challenges in drug safety and effectiveness.

Innovation Solution

A fusion protein is developed comprising an anti-TIGIT antibody and a variant TGF-βRII extracellular region fragment, where the first serine at the N-terminus is replaced with alanine, glycine, or threonine, and/or a specific amino acid sequence is deleted, enhancing stability and binding capabilities.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If a fusion protein is constructed using TGF-βRII extracellular region fragment, then binding activity to TGF-β is achieved, but the protein is unstable due to cleavage and degradation

Engineering Contradiction:
Improvebinding activityVSAvoidprotein stability
Core Design Contradiction:
ReliabilityVSStability of the object's composition

Solution Approach 1:

The patent extracts and removes the unstable N-terminal region (residues 1-20) containing the serine that is prone to cleavage and degradation. By taking out this problematic segment, the fusion protein maintains its binding activity while eliminating the source of instability, thus resolving the contradiction between binding activity and protein stability.

Inventive Principle:
Principle #2Taking out (Extraction)

Solution Approach 2:

The patent changes the amino acid sequence parameters by deleting the N-terminal region and potentially introducing linkers or stabilizing mutations. This parameter change in the protein structure eliminates cleavage sites and improves folding stability, allowing the fusion protein to maintain its functional properties while gaining structural stability.

Inventive Principle:
Principle #35Parameter changes

2Ease of manufacture

If the N-terminal serine is present in TGF-βRII extracellular region fragment, then the fragment can be expressed, but it undergoes easy cleavage and degradation

Engineering Contradiction:
Improveexpression capabilityVSAvoidresistance to cleavage
Core Design Contradiction:
Ease of manufactureVSReliability

Solution Approach 1:

The patent removes the N-terminal serine and its surrounding region (residues 1-20) that are susceptible to cleavage and degradation. This extraction eliminates the harmful cleavage sites while preserving the essential binding function, thus improving reliability without significantly affecting expressibility.

Inventive Principle:
Principle #2Taking out (Extraction)

Solution Approach 2:

The patent segments the TGF-βRII extracellular region into functional domains, retaining only the stable and functional portions (residues 21-...) while discarding the unstable N-terminal segment. This segmentation allows the protein to be expressed while resisting cleavage, as the remaining segment is structurally stable.

Inventive Principle:
Principle #1Segmentation

3Ease of manufacture

If fusion protein structure is simplified, then manufacturing is easier, but quality uniformity and purity are affected

Engineering Contradiction:
Improveproduction simplicityVSAvoidquality uniformity
Core Design Contradiction:
Ease of manufactureVSManufacturing precision

Solution Approach 1:

The patent extracts and removes the problematic N-terminal region that causes cleavage and degradation, simplifying the overall protein structure. This extraction improves manufacturing simplicity while enhancing quality uniformity and purity by eliminating the source of heterogeneity and degradation products.

Inventive Principle:
Principle #2Taking out (Extraction)

Solution Approach 2:

The patent changes the protein structure parameters by deleting the unstable N-terminal segment and optimizing the remaining sequence. This parameter change simplifies manufacturing while improving quality uniformity, as the modified structure is more resistant to degradation and more consistent in its functional properties.

Inventive Principle:
Principle #35Parameter changes

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

The fusion protein effectively binds to TIGIT and TGF-β, overcoming stability issues and demonstrating potential for anti-tumor drug applications by inhibiting immune checkpoints, thereby enhancing tumor treatment efficacy.

Implementation Method 1

the fusion protein can effectively bind to TIGIT and TGF-β at the same time

Methodology Applied
Scientific EffectProtein-protein interaction:

Data Source

PatentEP4671269A1Fusion protein comprising TGF-?RII extracellular region fragment, pharmaceutical composition thereof and use thereof
Publication Date: 2025.12.31 AKESO BIOPHARMA INC
  • EP4671269A1 patent drawingFigure 1
  • EP4671269A1 patent drawingFigure 2~3
  • EP4671269A1 patent drawingFigure 4

AI summary

The present disclosure pertains to the fields of biology and pharmaceutics and relates to a fusion protein comprising a TGF-βRII extracellular region fragment, a pharmaceutical composition thereof, and use thereof. Specifically, the fusion protein of the present disclosure comprises: a first protein functional region targeting an immune checkpoint and a second protein functional region with TGF-β binding activity, wherein the second protein functional region is a variant of a TGF-βRII extracellular region fragment, and the variant of the TGF-βRII extracellular region fragment is: the first serine at the N-terminus of the TGF-βRII extracellular region fragment is replaced with alanine, glycine, or threonine, and/or a fragment comprising the amino acid sequence set forth in SEQ ID NO: 59 is deleted from the TGF-βRII extracellular region fragment. The fusion protein of the present disclosure can simultaneously inhibit TIGIT and reduce TGF-β levels, demonstrating good potential for preparing anti-tumor drugs.