Transgenic Plant Biomass Modulation Using Exogenous Nucleic Acids

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Solution Overview

Problem

There is a need for molecular genetic approaches to rapidly produce plants with increased biomass, particularly for dedicated energy crops, and to identify specific genes and sequences that can effectively enhance biomass production in various geographic and climatic environments.

Innovation Solution

Introducing exogenous nucleic acids with regulatory regions operably linked to nucleotide sequences encoding polypeptides or having specific sequence identities, using Hidden Markov Model (HMM) scores to modulate biomass levels in plants, resulting in increased biomass production.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Quantity of substance

If traditional breeding methods are used to increase plant biomass, then biomass levels can be improved over time, but the process is time-consuming and slow

Engineering Contradiction:
Improvebiomass levelVSAvoidtime required for biomass improvement
Core Design Contradiction:
Quantity of substanceVSLoss of time

Solution Approach 1:

The patent replaces traditional mechanical breeding methods with molecular genetic approaches. Specifically, it uses PCR-based marker systems and DNA sequencing to identify and manipulate genes controlling biomass, substituting the slow mechanical process of selective breeding with accelerated molecular selection and transformation techniques.

Inventive Principle:
Principle #28Mechanics substitution (Replace mechanical system)

Solution Approach 2:

The patent changes the parameter of selection precision by moving from phenotypic selection to genotypic selection using molecular markers. By identifying specific DNA sequences associated with biomass traits, the method enables direct selection of desired genetic parameters, dramatically reducing the time required to achieve biomass improvement.

Inventive Principle:
Principle #35Parameter changes

2Productivity

If molecular genetic approaches are used to rapidly produce plants with increased biomass, then biomass production can be enhanced quickly, but the complexity of the methodology increases

Engineering Contradiction:
Improvebiomass production rateVSAvoidmethodological complexity
Core Design Contradiction:
ProductivityVSDevice complexity

Solution Approach 1:

The patent segments the complex task of biomass improvement into distinct molecular steps: (1) developing PCR markers for biomass-associated genes, (2) screening plants using these markers, (3) selecting individuals with desired genotypes, and (4) propagating selected plants. This segmentation makes the complex molecular process more manageable and systematic.

Inventive Principle:
Principle #1Segmentation

Solution Approach 2:

The patent introduces molecular markers as intermediaries between the target biomass trait and the selection process. These DNA markers serve as detectable proxies for the actual biomass phenotype, allowing indirect but rapid selection without requiring complex phenotypic measurements or lengthy growth trials.

Inventive Principle:
Principle #24Intermediary (Mediator)

3Manufacturing precision

If specific genes and sequences are identified to enhance biomass, then precision of biomass enhancement improves, but the difficulty of detecting and measuring these genetic elements increases

Engineering Contradiction:
Improveprecision of biomass enhancementVSAvoiddifficulty of detecting genetic elements
Core Design Contradiction:
Manufacturing precisionVSDifficulty of detecting and measuring

Solution Approach 1:

The patent creates simplified copies of complex genetic information through PCR amplification of specific DNA regions. By copying and amplifying marker sequences associated with biomass traits, the method makes these previously undetectable genetic elements easily measurable and selectable using standard molecular biology techniques.

Inventive Principle:
Principle #26Copying

Data Source

PatentUS12516339B2Transgenic plants having increased biomass
Publication Date: 2026.01.06 CERES INC
  • US12516339B2 patent drawing
  • US12516339B2 patent drawing
  • US12516339B2 patent drawing

AI summary

Methods and materials for modulating biomass levels in plants are disclosed. For example, nucleic acids encoding biomass-modulating polypeptides are disclosed as well as methods for using such nucleic acids to transform plant cells. Also disclosed are plants having increased biomass levels and plant products produced from plants having increased biomass levels.