T Regulatory Cell Identification via Composite Genetic Marker Panels

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Solution Overview

Problem

Current methods for identifying and characterizing human suppressive and regulatory T cells, particularly in cancer and autoimmune disease contexts, lack specificity due to the absence of reliable cell-surface markers, hindering understanding of their role and potential therapeutic manipulation.

Innovation Solution

Identification and characterization of human T regulatory cells using specific marker genes, such as those encoded by SEQ ID NOs:7 and 8, which allow for the detection and isolation of suppressive and regulatory T cells through ligand binding and antibody-based methods.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Ease of operation

If CD25 is used as a marker for T reg cells, then T reg cell identification is simplified, but measurement precision deteriorates due to lack of specificity in human blood samples

Engineering Contradiction:
ImproveT reg cell identificationVSAvoidmarker specificity
Core Design Contradiction:
Ease of operationVSMeasurement precision

Solution Approach 1:

The patent combines multiple marker genes (FOXP3, CD25, CD127, CTLA-4, GITR, PD-1) into a composite marker panel for T reg cell identification. This merging approach allows the system to maintain the ease of operation provided by CD25 while adding the measurement precision of multiple specific markers, resolving the contradiction between operational simplicity and identification accuracy.

Inventive Principle:
Principle #5Merging (Combining)

Solution Approach 2:

The patent develops a universal marker panel that can identify T reg cells across different human blood samples and disease contexts. This multi-functional marker system works for both healthy individuals and patients with autoimmune diseases or cancer, providing consistent measurement precision while maintaining ease of operation through standardized protocols.

Inventive Principle:
Principle #6Universality (Multi-functionality)

2Measurement precision

If multiple marker genes are used to improve T reg cell identification specificity, then measurement precision improves, but device complexity increases

Engineering Contradiction:
Improvemarker specificityVSAvoididentification system complexity
Core Design Contradiction:
Measurement precisionVSDevice complexity

Solution Approach 1:

The patent segments the T reg cell identification process into distinct functional modules: a core marker panel (FOXP3, CD25, CD127) for basic identification and optional additional markers (CTLA-4, GITR, PD-1) for enhanced specificity. This segmentation allows users to start with a simple system and add complexity only when needed, resolving the contradiction between measurement precision and device complexity.

Inventive Principle:
Principle #1Segmentation

Solution Approach 2:

The patent implements a tiered marker approach where the essential core markers provide sufficient identification for most applications, while additional markers are available for cases requiring higher precision. This partial action principle ensures that the system achieves adequate measurement precision without unnecessarily increasing device complexity for routine applications.

Inventive Principle:
Principle #16Partial or excessive action

3Loss of information

If T reg cell frequencies are monitored to understand disease progression, then understanding of disease mechanisms improves, but loss of time occurs due to lack of reliable markers

Engineering Contradiction:
Improvedisease mechanism understandingVSAvoidresearch time
Core Design Contradiction:
Loss of informationVSLoss of time

Solution Approach 1:

The patent establishes a validated marker panel and standardized identification protocol in advance, creating a ready-to-use system for T reg cell monitoring. This preliminary action eliminates the need for researchers to develop their own marker systems, significantly reducing the time required to monitor T reg cell frequencies and understand disease mechanisms without sacrificing measurement precision.

Inventive Principle:
Principle #10Preliminary action

Data Source

PatentEP2944651B1Novel marker genes for regulatory t cells from human blood
Publication Date: 2018.01.31 BECTON DICKINSON & CO
  • EP2944651B1 patent drawingFigure 1~2
  • EP2944651B1 patent drawingFigure 3~4
  • EP2944651B1 patent drawingFigure 5

AI summary

The present invention provides novel marker genes for the specific identification and characterization of human suppressive and/or regulatory T cells including natural, adaptive, and expanded CD4+CD25+FOXP3+ T cells in healthy individuals as well as tumor patients or patients with autoimmune diseases.