Truncated Monomeric BChE Codon Optimization

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Solution Overview

Problem

Current methods for producing recombinant butyrylcholinesterase (BChE) face challenges such as low yield, complex manufacturing processes, short half-life, heterogeneous product composition, and high costs, making it difficult to develop the enzyme as a therapeutic agent for conditions like organophosphate poisoning and cocaine intoxication.

Innovation Solution

The development of a codon-optimized nucleic acid encoding a truncated monomeric form of BChE, which is more stable and easier to produce, with optimized glycosylation and sialylation sites, allowing for higher yields and longer serum half-life, thereby reducing the need for expensive post-synthetic modifications like pegylation.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Productivity

If recombinant BChE is produced using conventional methods, then the enzyme can be obtained for therapeutic use, but the production yield is low and the manufacturing process is complex

Engineering Contradiction:
Improveproduction yieldVSAvoidmanufacturing process complexity
Core Design Contradiction:
ProductivityVSDevice complexity

Solution Approach 1:

The patent divides the full-length BChE protein (590 amino acids) into a truncated version (amino acids 1-564), removing the C-terminal domain. This segmentation simplifies the protein structure, making it easier to produce recombinantly with higher yields while maintaining the essential catalytic activity for detoxifying organophosphates and cocaine

Inventive Principle:
Principle #1Segmentation

Solution Approach 2:

The patent modifies the nucleic acid sequence through codon optimization to match human cell preferences, and engineers specific glycosylation sites (N-X-S/T motifs) into the truncated BChE sequence. These parameter changes in the molecular structure enable efficient expression in mammalian cells and improve protein stability and half-life in serum

Inventive Principle:
Principle #35Parameter changes

2Manufacturing precision

If conventional recombinant BChE production methods are used, then the enzyme can be produced, but the product composition is heterogeneous and purification is difficult

Engineering Contradiction:
Improveproduct homogeneityVSAvoidpurification difficulty
Core Design Contradiction:
Manufacturing precisionVSEase of manufacture

Solution Approach 1:

The patent extracts or removes the C-terminal domain (amino acids 565-590) from the full-length BChE protein. This removal eliminates regions that contribute to heterogeneity and complex post-translational modifications, resulting in a more homogeneous product that is easier to purify and characterize for therapeutic applications

Inventive Principle:
Principle #2Taking out (Extraction)

3Duration of action of stationary object

If conventional BChE production methods are used, then the enzyme can be obtained, but the serum half-life is short requiring expensive post-synthetic modifications

Engineering Contradiction:
Improveserum half-lifeVSAvoidproduction cost
Core Design Contradiction:
Duration of action of stationary objectVSEase of manufacture

Solution Approach 1:

The patent performs preliminary engineering of glycosylation sites (N-X-S/T motifs) directly into the truncated BChE sequence during the gene design stage. This preliminary action ensures that when the protein is expressed in mammalian cells, it receives appropriate glycosylation modifications that extend serum half-life, eliminating the need for expensive post-synthetic pegylation or other stabilization modifications

Inventive Principle:
Principle #10Preliminary action

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

The truncated monomeric form of BChE is produced in higher quantities, with improved stability and homogeneity, making it a more viable therapeutic agent with extended serum half-life and reduced production costs.

Implementation Method 1

polynucleotides codon-optimized for expression in mammalian, especially human, cells

Methodology Applied
Scientific EffectCodon optimization:

Implementation Method 2

Butyrylcholinesterase (BChE)...preferentially uses butyrylcholine and benzoylcholine as in vitro substrates...in addition to preventing lethality, the pretreatment prevented behavioral incapacitation...BChE is the major detoxifying enzyme of cocaine...Cocaine is metabolized by three major routes: hydrolysis by BChE

Methodology Applied
Scientific EffectEnzymatic hydrolysis: Hydrolysis

Implementation Method 3

optimized glycosylation and sialylation sites, allowing for higher yields and longer serum half-life

Methodology Applied
Scientific EffectGlycosylation:

Implementation Method 4

optimized glycosylation and sialylation sites, allowing for higher yields and longer serum half-life

Methodology Applied
Scientific EffectSialylation:

Data Source

PatentUS8952143B2Recombinant butyrylcholinesterases and truncates thereof
Publication Date: 2015.02.10 PHARMATHENE
  • US8952143B2 patent drawing
  • US8952143B2 patent drawing
  • US8952143B2 patent drawing

AI summary

Isolated nucleic acids encoding polypeptides that exhibit butyrylcholinesterase (BChE) enzyme activity are disclosed, along with molecular criteria for preparing such nucleic acids, including codon optimization. Methods of preparing modified and/or truncated BChE molecules having selected properties, especially selective formation of monomers, are also described. Vectors and cells containing and/or expressing the nucleic acids are also disclosed.