Vancomycin Derivatives with Lipophilic Linkers for Antibacterial Stability

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Solution Overview

Problem

Existing antibacterial agents, such as glycopeptide antibiotics, face challenges with physiological stability and resistance from Gram-positive bacteria, leading to the need for new agents with improved stability and efficacy against bacterial infections.

Innovation Solution

Development of novel glycopeptide derivatives with specific linking groups and lipophilic elements that enhance stability and reduce proteolysis, while maintaining antimicrobial activity, including compounds of the formula X—W-L-V, where X is a lipophilic group, W is a basic amino acid or peptide, and L is a linking group, attached to a glycopeptide moiety that inhibits peptidoglycan biosynthesis in bacteria.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If glycopeptide antibiotics are used to treat bacterial infections, then antibacterial activity is achieved, but physiological stability deteriorates and resistance develops

Engineering Contradiction:
Improveantibacterial activityVSAvoidphysiological stability
Core Design Contradiction:
ReliabilityVSStability of the object's composition

Solution Approach 1:

The patent modifies the chemical structure of glycopeptide antibiotics by changing parameters such as adding lipophilic groups, modifying amino acid sequences, and altering sugar moieties. These parameter changes enhance physiological stability while preserving antibacterial activity against resistant strains including MRSA and VRE.

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

The invention creates composite structures by combining glycopeptide cores with additional functional elements such as lipophilic side chains, modified sugar residues, and peptide extensions. These composite molecules exhibit both improved stability in physiological conditions and maintained or enhanced antibacterial efficacy.

Inventive Principle:
Principle #40Composite materials

2Reliability

If existing glycopeptide derivatives are developed to combat resistant strains, then activity against resistant bacteria improves, but complexity of the compound structure increases

Engineering Contradiction:
Improveactivity against resistant bacteriaVSAvoidcompound structure complexity
Core Design Contradiction:
ReliabilityVSDevice complexity

Solution Approach 1:

The patent applies local quality modifications by making specific targeted changes to particular regions of the glycopeptide molecule rather than comprehensive restructuring. Examples include modifying specific sugar moieties, adding functional groups at specific positions, or altering particular amino acid residues while keeping the core structure relatively simple and recognizable.

Inventive Principle:
Principle #3Local quality

3Stability of the object's composition

If novel glycopeptide derivatives with enhanced stability are created, then physiological stability improves, but difficulty of synthesis increases

Engineering Contradiction:
Improvephysiological stabilityVSAvoidsynthesis difficulty
Core Design Contradiction:
Stability of the object's compositionVSEase of manufacture

Solution Approach 1:

The patent employs segmentation by dividing the complex glycopeptide synthesis into separate modular stages: core glycopeptide assembly, subsequent attachment of lipophilic groups, and final modifications of sugar or peptide moieties. This segmented approach allows each stage to be optimized independently, improving overall manufacturability despite the complexity of the final stable compound.

Inventive Principle:
Principle #1Segmentation

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

The new compounds demonstrate improved stability and antibacterial activity against resistant strains, including MRSA, with enhanced pharmacokinetic profiles and reduced potential for degradation, making them effective for treating bacterial infections.

Implementation Method 1

The D-Ala-D-Ala dipeptide forms complementary hydrogen bonds with the peptide backbone of vancomycin

Methodology Applied
Scientific EffectHydrogen bonding:

Implementation Method 2

X is a lipophilic group attached to the N-terminus of W

Methodology Applied
Scientific EffectLipophilicity:

Implementation Method 3

W is a basic amino acid or a basic peptide consisting of from 2 to 10 amino acids

Methodology Applied
Scientific EffectElectrostatic interaction:

Data Source

PatentUS10947271B2Antibacterial agents
Publication Date: 2021.03.16 THE UNIVERSITY OF QUEENSLAND
  • US10947271B2 patent drawing
  • US10947271B2 patent drawing
  • US10947271B2 patent drawing

AI summary

The invention concerns agents with antibacterial activity, their production and use in the treatment of bacterial infections in animals, including man. The agents are derivatives of vancomycin-type antibiotics, of structure X—W-L-V, wherein X is hydrogen, acetyl or a lipophilic membrane-insertive element, W is a basic peptide or basic amino acid; L is a linking group and V is a glycopeptide moiety which inhibits peptidoglycan biosynthesis in bacteria.