WRAP Peptides for siRNA Delivery via Amphipathic Self-Assembly

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Solution Overview

Problem

Current cell-penetrating peptides (CPPs) face limitations such as low stability, limited membrane permeability, inefficient gene silencing, and cytotoxicity when delivering siRNA into cells, necessitating the development of more effective and less toxic CPPs for therapeutic agent delivery.

Innovation Solution

The development of new short amphipathic peptides composed exclusively of leucine (L), arginine (R), and tryptophan (W) residues, known as WRAP peptides, which are designed to enhance solubility, secondary structure, and uptake efficiency while reducing cytotoxicity, forming nanoparticles with siRNA for efficient cellular delivery.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If conventional cell-penetrating peptides are used for siRNA delivery, then cell penetration capability is achieved, but cytotoxicity and low stability occur

Engineering Contradiction:
Improvecell penetration capabilityVSAvoidcytotoxicity
Core Design Contradiction:
ReliabilityVSObject-affected harmful factors

Solution Approach 1:

The patent modifies the amino acid composition parameters of CPPs by restricting residues to only L, R, and W, with specific ratios (4 R, 4 L, and 2-4 W residues). This parameter optimization resolves the contradiction by achieving effective cell penetration while reducing cytotoxicity through controlled residue selection and distribution.

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

The invention creates composite peptide structures combining specific amino acid residues (L, R, W) in defined patterns to form amphipathic peptides with optimized properties. This composite approach enables simultaneous achievement of membrane permeability and reduced cytotoxicity through synergistic residue interactions.

Inventive Principle:
Principle #40Composite materials

2Productivity

If conventional CPPs are used for siRNA delivery, then cellular internalization is achieved, but transfection efficiency is insufficient

Engineering Contradiction:
Improvecellular internalization rateVSAvoidtransfection efficiency
Core Design Contradiction:
ProductivityVSReliability

Solution Approach 1:

The patent optimizes transfection efficiency by adjusting critical parameters including peptide length (14-16 residues), residue composition ratios, and hydrophobicity balance. These parameter changes enable efficient cellular internalization while ensuring reliable transfection through enhanced peptide-cargo complex formation and endosomal escape.

Inventive Principle:
Principle #35Parameter changes

3Strength

If existing CPP sequences are used, then membrane permeability is achieved, but stability is low

Engineering Contradiction:
Improvemembrane permeabilityVSAvoidpeptide stability
Core Design Contradiction:
StrengthVSStability of the object's composition

Solution Approach 1:

The invention enhances peptide stability by optimizing structural parameters including the introduction of tryptophan residues that stabilize secondary structure, controlling peptide length within 14-16 residues, and establishing specific L-R-W residue patterns that resist proteolytic degradation while maintaining membrane permeability.

Inventive Principle:
Principle #35Parameter changes

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

The WRAP peptides demonstrate higher transfection efficacy and lower cytotoxicity, enabling effective delivery of cargo molecules into cells with improved stability and specificity, outperforming existing CPPs in terms of knock-down efficiency and safety.

Implementation Method 1

The formation of non-covalent nanoparticles (NPs) has been particularly efficient in the CPP-mediated delivery of oligonucleotides carrying multiple negative charges and therefore able to form electrostatic complexes with cationic peptides.

Methodology Applied
Scientific EffectElectrostatic interactions: Electrostatics

Implementation Method 2

Amphipathic CPPs contain both hydrophilic and hydrophobic domains necessary for cellular internalization and interaction with the cargo.

Methodology Applied
Scientific EffectAmphipathic interaction: Amphiphiles

Data Source

PatentUS11905338B2Peptides for use as cell-penetrating peptides
Publication Date: 2024.02.20 CENT NAT DE LA RECH SCI (C N R S)
  • US11905338B2 patent drawing
  • US11905338B2 patent drawing
  • US11905338B2 patent drawing

AI summary

The present invention relates to new peptides comprising an amino acid sequence LL-[X]n-LL, wherein X is selected from R, L and W, and n=10 to 12, and wherein [X]n comprises 4 R, 4 L and between 2 and 4 W, that may be used as cell-penetrating peptides. The present invention also relates to nanoparticles comprising a peptide of the invention and a cargo molecule and uses thereof.