Capsular Saccharide Glycoconjugates With Click-Chemistry Conjugation

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Solution Overview

Problem

Existing methods for generating glycoconjugates, particularly those involving Streptococcus pneumoniae serotypes 35B and 29 polysaccharides, face challenges such as low yield and high free saccharide due to cleavage during activation, and there is a need for improved conjugation processes that preserve functionality and stability.

Innovation Solution

A method involving reacting capsular saccharides with a carbonic acid derivative and an azido linker in an aprotic solvent, followed by Cu+1 mediated azide-alkyne cycloaddition with an alkyne-functionalized carrier protein, and capping unreacted groups to form stable glycoconjugates.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Ease of manufacture

If conventional cross-linking or coupling reagents are used to generate glycoconjugates, then conjugation can be achieved, but free reactive sites remain that can react with unwanted molecules in vitro or in vivo, potentially affecting functionality, stability, or causing adverse events

Engineering Contradiction:
Improveconjugation processVSAvoidfunctionality and stability of conjugates
Core Design Contradiction:
Ease of manufactureVSReliability

Solution Approach 1:

The patent removes harmful reactive sites from the conjugation process by using copper-catalyzed azide-alkyne cycloaddition, which creates stable triazole linkages without leaving excess reactive groups. The method specifically extracts the problem of free reactive sites by choosing a coupling chemistry (click chemistry) that inherently produces stable, non-reactive conjugates.

Inventive Principle:
Principle #2Taking out (Extraction)

Solution Approach 2:

The patent converts the potential harm of reactive sites into a benefit by using azide and alkyne functional groups that are inert under physiological conditions but can be selectively coupled through copper-catalyzed cycloaddition. The resulting triazole linkage is stable and non-reactive, turning what could have been harmful reactive sites into stable conjugation bonds.

Inventive Principle:
Principle #22Blessing in disguise (Convert harm into benefit)

2Ease of manufacture

If periodate oxidation is used to activate Streptococcus pneumoniae serotypes 35B and 29 polysaccharides for conjugation, then conjugation can proceed, but the polysaccharides undergo cleavage resulting in low yield and high free saccharide

Engineering Contradiction:
Improveconjugation processVSAvoidyield of glycoconjugate
Core Design Contradiction:
Ease of manufactureVSProductivity

Solution Approach 1:

The patent changes the chemical parameters of the activation process by replacing periodate oxidation with alternative activation methods such as N-hydroxysuccinimide ester formation or other copper-catalyzed click chemistry approaches. This parameter change avoids the cleavage issue inherent to periodate oxidation while maintaining conjugation efficiency.

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

The patent introduces copper catalyst as an intermediary that enables selective coupling of azide-functionalized polysaccharides with alkyne-functionalized carriers without requiring periodate oxidation. This intermediary approach allows conjugation to proceed through a different mechanism that preserves polysaccharide integrity and increases yield.

Inventive Principle:
Principle #24Intermediary (Mediator)

3Reliability

If excess reactive sites are capped to inactivate them, then safety and stability improve, but the capping reactions may be disruptive to the functionality of the conjugates

Engineering Contradiction:
Improvesafety and stabilityVSAvoidconjugate functionality
Core Design Contradiction:
ReliabilityVSEase of manufacture

Solution Approach 1:

The patent eliminates the need for capping reactions by using click chemistry that inherently produces stable, non-reactive triazole linkages. The method converts the potential harm of reactive sites into a benefit by designing a conjugation system where the coupling reaction itself creates stable bonds without leaving excess reactive groups that would require capping.

Inventive Principle:
Principle #22Blessing in disguise (Convert harm into benefit)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

The method allows for the production of glycoconjugates with very low free saccharide and high yield, effectively addressing the challenges posed by Streptococcus pneumoniae serotypes 35B and 29 polysaccharides.

Implementation Method 1

reacting an isolated capsular saccharide with a carbonic acid derivative and an azido linker in an aprotic solvent to produce an activated azido saccharide

Methodology Applied
Scientific EffectChemical Bonding: Chemical Bonding

Implementation Method 2

reacting a carrier protein with an agent bearing an N-Hydroxysuccinimide (NHS) moiety and an alkyne group where the NHS moiety reacts with the amino groups to form an amide linkage

Methodology Applied
Scientific EffectChemical Bonding: Chemical Bonding

Implementation Method 3

reacting the activated azido saccharide of step (a) with the activated alkyne-carrier protein of step (b) by Cu+1 mediated azide-alkyne cycloaddition reaction to form a glycoconjugate

Methodology Applied
Scientific EffectCatalysis: Catalysis

Data Source

PatentUS20250381259A1Immunogenic Compositions Comprising Conjugated Capsular Saccharide Antigens and Uses Thereof
Publication Date: 2025.12.18 PFIZER INC
  • US20250381259A1 patent drawing
  • US20250381259A1 patent drawing
  • US20250381259A1 patent drawing

AI summary

The present invention relates to new conjugated capsular saccharide antigens (glycoconjugates), immunogenic compositions comprising said glycoconjugates and uses thereof.