Multi-Step Chromatography for CBS Protein Purification

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Solution Overview

Problem

Current methods for purifying recombinant cystathionine β-synthase (CBS) protein are inefficient, leading to impurities and insufficient purity for therapeutic use, particularly in CBS-deficient patients with homocystinuria, where high purity is crucial for enzyme replacement therapy.

Innovation Solution

A multi-step chromatographic purification method involving metal affinity chromatography (IMAC), ion exchange chromatography, hydrophobic interaction chromatography, and ceramic hydroxyapatite resin is employed to achieve high purity of CBS protein, eliminating the need for affinity tags and thereby avoiding immunogenicity and biochemical activity issues associated with tagged proteins.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Productivity

If affinity tags are used to facilitate CBS protein purification, then purification efficiency is improved, but immunogenicity and biochemical activity issues arise

Engineering Contradiction:
Improvepurification efficiencyVSAvoidimmunogenicity
Core Design Contradiction:
ProductivityVSObject-affected harmful factors

Solution Approach 1:

The patent removes the affinity tag from the final purified CBS protein product. The tag is used only during the purification process on the column, then eliminated through proteolytic cleavage or selective elution conditions, leaving only the native CBS protein that is free from immunogenic tag sequences.

Inventive Principle:
Principle #2Taking out (Extraction)

Solution Approach 2:

The affinity tag serves as a temporary intermediary that facilitates purification but is not part of the final product. The tag mediates the binding to the chromatography column during purification, then is removed to leave the pure native CBS protein.

Inventive Principle:
Principle #24Intermediary (Mediator)

2Manufacturing precision

If multi-step chromatographic purification is employed, then protein purity is improved, but process complexity increases

Engineering Contradiction:
Improveprotein purityVSAvoidprocess complexity
Core Design Contradiction:
Manufacturing precisionVSDevice complexity

Solution Approach 1:

The purification process is divided into distinct sequential steps: capture chromatography, intermediate purification, and polishing steps. Each step targets specific impurities and progressively increases purity, with each stage being independently optimized and controlled.

Inventive Principle:
Principle #1Segmentation

Solution Approach 2:

Different chromatographic modes are employed with varying parameters (ion exchange, affinity, hydrophobic interaction) to exploit different physical-chemical properties of the CBS protein and impurities. Each step uses optimized pH, ionic strength, and buffer conditions to maximize separation efficiency.

Inventive Principle:
Principle #35Parameter changes

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

This method significantly enhances the purity and specific activity of CBS protein, making it suitable for therapeutic use without the need for additional protein modifications, thereby improving treatment options for CBS-deficient patients.

Implementation Method 1

performing chromatographic separation of said CBS-containing solution using a metal affinity chromatography (IMAC) resin

Methodology Applied
Scientific EffectMetal affinity chromatography: Chromatography

Implementation Method 2

performing chromatographic separation of said CBS-containing solution using an ion exchange chromatography column

Methodology Applied
Scientific EffectIon exchange chromatography: Ion Exchange

Implementation Method 3

hydrophobic interaction chromatography

Methodology Applied
Scientific EffectHydrophobic interaction chromatography: Chromatography

Implementation Method 4

ceramic hydroxyapatite resin

Methodology Applied
Scientific EffectAdsorption: Adsorption

Data Source

PatentUS10941392B2Purification of cystathionine beta-synthase
Publication Date: 2021.03.09 THE REGENTS OF THE UNIVERSITY OF COLORADO
  • US10941392B2 patent drawing
  • US10941392B2 patent drawing
  • US10941392B2 patent drawing

AI summary

This invention provides chromatographic methods for the purification of a cystathionine β-Synthase (CBS) protein, particularly truncated variants thereof and compositions and pharmaceutical compositions prepared therefrom.