Temperature-Controlled Insect Suppression Using Cpf1 Nuclease

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Solution Overview

Problem

Current methods for generating sterile insect populations for control and modification are labor-intensive and face scalability issues during commercialization, relying on labor-intensive selection of transgenic males and females for genetic crosses.

Innovation Solution

The use of a temperature-dependent RNA-guided nuclease, Cpf1 (Cas12a), which allows for the generation of single insect lines containing both a nuclease and gRNA-expressing transgenes that are inactive at lower temperatures, enabling the production of sterile males when switched to higher temperatures, thus simplifying the scale-up process.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If labor-intensive selection of transgenic males and females is used to generate genetic crosses, then sterile male insects can be produced, but the process becomes unsuitable for scale-up during commercialization

Engineering Contradiction:
Improveproduction of sterile malesVSAvoidscale-up capability
Core Design Contradiction:
ReliabilityVSProductivity

Solution Approach 1:

The patent applies parameter changes by utilizing temperature as a control parameter to regulate nuclease activity. At permissive temperatures, the nuclease is inactive and allows normal insect development. At non-permissive temperatures, the nuclease becomes active and produces sterile males. This temperature-dependent parameter change enables automatic differentiation without labor-intensive selection processes, making the system scalable for commercialization.

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

The patent replaces the mechanical/labor-intensive selection system with a temperature-based biological control system. Instead of manually selecting and crossing specific transgenic individuals, the system uses temperature-induced nuclease activation to automatically generate sterile males, eliminating the need for labor-intensive genetic crossing operations while maintaining reliable production.

Inventive Principle:
Principle #28Mechanics substitution (Replace mechanical system)

2Stability of the object's composition

If transgenic lines are maintained at lower temperatures, then the lines remain stable and fertile, but sterile male production is prevented

Engineering Contradiction:
Improvetransgenic line stabilityVSAvoidsterile male generation
Core Design Contradiction:
Stability of the object's compositionVSProductivity

Solution Approach 1:

The patent applies dynamics by making the nuclease activity temperature-dependent rather than static. The same transgenic line can dynamically switch between two states: at permissive temperatures, the nuclease is inactive and the line remains stable and fertile for maintenance; at non-permissive temperatures, the nuclease becomes active and generates sterile males. This dynamic response to temperature changes allows the system to adapt between line maintenance and sterile male production modes.

Inventive Principle:
Principle #15Dynamics

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

This approach allows for efficient generation of sterile males without the need for labor-intensive selection, enabling temperature-controlled insect population engineering and suppression systems, and can be used to time gene drive activity for optimal effectiveness in the wild.

Implementation Method 1

the use of an RNA-guided nuclease, such as Cpf1 (aka Cas12a) which has a temperature-dependent activity

Methodology Applied
Scientific EffectTemperature-dependent activity:

Data Source

PatentUS20240389565A1Method and composition for temperature controlled insect suppression or modification
Publication Date: 2024.11.28 RGT UNIV OF CALIFORNIA
  • US20240389565A1 patent drawing
  • US20240389565A1 patent drawing

AI summary

The present disclosure provides methods for generating insect strains that can be used for genetic suppression or modification of insect populations. The method of the present disclosure covers both gene drive (GD) approaches and genetic sterile insect technique (gSIT, aka pgSIT), and uses an RNA-guided nuclease, such as Cpf1 (aka Cas12a), which has a temperature-dependent activity and turns genetic approaches for insect control to temperature-controllable systems.