Cryogenically Arrayable Stable Transfection Workflow

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Solution Overview

Problem

Current methods for gene editing in cells are time-consuming and require extensive preparation, including cell expansion and centrifugation, which slows down the process of editing multiple cells and cell lines simultaneously while maintaining efficiency and safety.

Innovation Solution

The Cryogenically Arrayable Stable Transfection (CAST) method involves thawing cryopreserved cells directly into a transfection workflow without the need for expansion or centrifugation, allowing for immediate contact with genetic material and a cell manipulation solution to introduce the genetic material into the cells.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Loss of time

If traditional transfection methods are used with cell expansion and centrifugation steps, then cell viability and transfection efficiency are maintained, but processing time increases significantly

Engineering Contradiction:
Improveprocessing timeVSAvoidediting throughput
Core Design Contradiction:
Loss of timeVSProductivity

Solution Approach 1:

Cells are cryopreserved in a ready-to-use state with freezing media already in place, eliminating the need for post-thaw expansion. The cells are prepared in advance through cryopreservation, allowing immediate transfection upon thawing without requiring time-consuming expansion steps.

Inventive Principle:
Principle #10Preliminary action

Solution Approach 2:

The invention extracts and removes the time-consuming cell expansion step from the traditional transfection workflow. By using cryopreserved cells that can be directly transfected after thawing, the expansion phase is completely eliminated, reducing processing time while maintaining transfection efficiency.

Inventive Principle:
Principle #2Taking out (Extraction)

2Loss of time

If cells are cryopreserved and thawed without centrifugation, then processing time is reduced, but cell viability may be compromised

Engineering Contradiction:
Improveprocessing timeVSAvoidcell viability
Core Design Contradiction:
Loss of timeVSReliability

Solution Approach 1:

The freezing media serves dual purposes: it maintains cells in a viable state during cryopreservation and enables direct transfection after thawing without requiring centrifugation or expansion steps. The media itself facilitates the transfection process, eliminating the need for additional cell handling steps.

Inventive Principle:
Principle #25Self-service

Solution Approach 2:

The invention changes the physical state and composition parameters of the cell suspension by using freezing media that allows direct transfection. The media's chemical composition and physical properties are optimized to enable immediate transfection upon thawing, maintaining cell viability without centrifugation.

Inventive Principle:
Principle #35Parameter changes

3Productivity

If multiple cell lines are processed simultaneously, then productivity increases, but maintaining consistent transfection efficiency becomes more difficult

Engineering Contradiction:
Improveediting throughputVSAvoidtransfection efficiency consistency
Core Design Contradiction:
ProductivityVSManufacturing precision

Solution Approach 1:

The cryopreservation and transfection protocol is designed to be universally applicable across multiple cell lines and types. The same freezing media composition and transfection protocol can be used for different cell lines, enabling simultaneous processing while maintaining consistent transfection efficiency through standardized procedures.

Inventive Principle:
Principle #6Universality (Multi-functionality)

Solution Approach 2:

The invention segments the transfection process into discrete, standardized steps that can be applied to multiple cell lines simultaneously. By using arrayed formats and standardized protocols for each cell line, consistent transfection efficiency is maintained across parallel processing of multiple cell types.

Inventive Principle:
Principle #1Segmentation

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

CAST enables accelerated gene editing by eliminating the need for cell expansion and centrifugation, thereby reducing processing time and maintaining high editing efficiency across multiple cell types and cell lines.

Implementation Method 1

cells are cryopreserved within a freezing media in a cell container

Methodology Applied
Scientific EffectCryopreservation: Freezing

Implementation Method 2

thawing the cells in the cell container

Methodology Applied
Scientific EffectThawing: Melting

Data Source

PatentUS20250113820A1Cryogenically arrayable stable transfection
Publication Date: 2025.04.10 EDITCO BIO INC
  • US20250113820A1 patent drawing
  • US20250113820A1 patent drawing
  • US20250113820A1 patent drawing

AI summary

Provided herein systems and methods for processing cryopreserved cells without an expansion phase after thawing, including transfecting cells for gene editing purposes and cryopreserving transfected cells. Systems and methods for high-throughput processing of frozen cells are also provided. The systems and methods provided can be used to modify cells, including gene editing, in cell arrays.