Engineered Microbial Pathways for 1,4-Butanediol Production

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Solution Overview

Problem

Current methods for producing 1,4-butanediol and its precursors are energy- and capital-intensive, relying on petroleum-based feedstocks, and alternative biologically-produced intermediates like succinic acid are costly and require high temperatures and pressures.

Innovation Solution

Design and production of non-naturally occurring microbial organisms with engineered pathways for 4-hydroxybutanoic acid, 4-hydroxybutanal, 4-hydroxybutyryl-CoA, and putrescine biosynthesis, using exogenous nucleic acids to express enzymes that enable efficient production of these compounds.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Productivity

If petroleum-based feedstocks are used for 1,4-butanediol production, then production scale and market supply are maintained, but energy consumption and capital investment increase

Engineering Contradiction:
Improveproduction scaleVSAvoidenergy consumption
Core Design Contradiction:
ProductivityVSUse of energy by moving object

Solution Approach 1:

The patent replaces conventional petrochemical mechanical/thermal processes with biological fermentation processes. Microorganisms are engineered to metabolize renewable feedstocks and produce 1,4-butanediol through biochemical pathways, substituting high-energy petrochemical synthesis with lower-energy biological conversion

Inventive Principle:
Principle #28Mechanics substitution (Replace mechanical system)

Solution Approach 2:

The patent changes the fundamental production parameters by shifting from petrochemical feedstocks to renewable biomass feedstocks. This parameter change enables production under milder conditions (ambient temperature and pressure) compared to high-temperature petrochemical processes, thereby reducing energy consumption

Inventive Principle:
Principle #35Parameter changes

2Adaptability or versatility

If succinic acid is used as biologically-produced intermediate, then renewable feedstock substitution is achieved, but production cost increases due to isolation and purification requirements

Engineering Contradiction:
Improverenewable feedstock substitutionVSAvoidproduction cost
Core Design Contradiction:
Adaptability or versatilityVSEase of manufacture

Solution Approach 1:

The patent extracts the desired product (1,4-butanediol) directly from the fermentation broth through engineered microbial pathways, eliminating the need for complex isolation and purification of intermediate compounds like succinic acid. The metabolic pathway is designed to produce the final product directly, simplifying downstream processing

Inventive Principle:
Principle #2Taking out (Extraction)

Solution Approach 2:

The patent uses engineered microbial cells as living factories that serve as intermediaries between renewable feedstocks and the target product. These microorganisms contain optimized metabolic pathways that directly convert feedstock to 1,4-butanediol, eliminating the need for separate isolation and chemical conversion steps required when using succinic acid as an intermediate

Inventive Principle:
Principle #24Intermediary (Mediator)

3Adaptability or versatility

If succinic acid is used as intermediate, then biological production pathway is established, but high temperatures and pressures are required for catalytic reduction

Engineering Contradiction:
Improvebiological production pathwayVSAvoidprocessing temperature
Core Design Contradiction:
Adaptability or versatilityVSTemperature

Solution Approach 1:

The patent replaces high-temperature catalytic reduction with biological reduction pathways. Engineered microorganisms use enzymatic systems to reduce intermediates to 1,4-butanediol under mild physiological conditions, substituting high-temperature chemical processes with low-temperature biological processes

Inventive Principle:
Principle #28Mechanics substitution (Replace mechanical system)

Solution Approach 2:

The patent changes the processing temperature parameter by utilizing biological systems that operate at ambient or physiological temperatures. The engineered metabolic pathways enable product formation under mild conditions, eliminating the need for high-temperature catalytic reduction required by conventional chemical methods

Inventive Principle:
Principle #35Parameter changes

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

The microbial organisms produce 1,4-butanediol and its precursors with reduced energy and capital requirements, offering a sustainable alternative to petroleum-based methods and improving production efficiency.

Implementation Method 1

comprising at least one exogenous nucleic acid encoding a BDO, 4-HBal and/or putrescine pathway enzyme expressed in a sufficient amount to produce BDO, 4-HBal, 4-HBCoA and/or putrescine

Methodology Applied
Scientific EffectEnzyme catalysis: Enzyme

Data Source

PatentUS8377667B2Microorganisms for the production of 1,4-butanediol, 4-hydroxybutanal, 4-hydroxybutyryl-CoA, putrescine and related compounds, and methods related thereto
Publication Date: 2013.02.19 GENOMATICA INC
  • US8377667B2 patent drawing
  • US8377667B2 patent drawing
  • US8377667B2 patent drawing

AI summary

The invention provides non-naturally occurring microbial organisms comprising a 1,4-butanediol (BDO), 4-hydroxybutyryl-CoA, 4-hydroxybutanal or putrescine pathway comprising at least one exogenous nucleic acid encoding a BDO, 4-hydroxybutyryl-CoA, 4-hydroxybutanal or putrescine pathway enzyme expressed in a sufficient amount to produce BDO, 4-hydroxybutyryl-CoA, 4-hydroxybutanal or putrescine and further optimized for expression of BDO. The invention additionally provides methods of using such microbial organisms to produce BDO, 4-hydroxybutyryl-CoA, 4-hydroxybutanal or putrescine.