NPY Gene Marker for Duck Feed Efficiency Selection

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Solution Overview

Problem

Current breeding methods for white feather ducks lack efficient tools for identifying traits related to feed utilization, leading to slow progress in phenotypic breeding and a need for early selection of genotypes with high feed efficiency.

Innovation Solution

A molecular marker based on the neuropeptide gene NPY is developed, allowing for the identification of duck feed utilization efficiency through SNP loci, using PCR-SSCP method and specific primers, enabling early genotyping and selection of ducks with high or fair feed conversion traits.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Productivity

If conventional phenotypic breeding methods are used for white feather ducks, then breeding can proceed without molecular tools, but the progress in identifying feed utilization traits is slow and early selection cannot be achieved

Engineering Contradiction:
Improvebreeding progressVSAvoidtime for phenotypic breeding
Core Design Contradiction:
ProductivityVSLoss of time

Solution Approach 1:

The patent applies preliminary action by developing and establishing SNP molecular markers (specifically the T/C polymorphism at position 577 of the NPY gene) before breeding operations. This allows feed efficiency traits to be identified and selected at the molecular level in early stages, rather than waiting for phenotypic expression later. The marker-assisted selection system enables breeders to make informed decisions about which ducks to propagate based on their genetic potential for feed utilization, significantly accelerating breeding progress and eliminating the time loss associated with conventional slow phenotypic evaluation methods.

Inventive Principle:
Principle #10Preliminary action

2Measurement precision

If molecular marker analysis is implemented for feed efficiency traits, then early selection of genotypes becomes possible, but the complexity of detection methods increases

Engineering Contradiction:
Improveidentification accuracy of feed efficiency traitsVSAvoidcomplexity of molecular detection system
Core Design Contradiction:
Measurement precisionVSDevice complexity

Solution Approach 1:

The patent applies the extraction principle by isolating and focusing on a specific, simple molecular marker (the T/C SNP at position 577 of the NPY gene) that is directly associated with feed efficiency traits. Rather than implementing complex whole-genome analysis or multiple marker systems, the invention extracts the critical genetic variation from the NPY gene that correlates with feed conversion ratio. This targeted approach achieves high measurement precision in identifying feed-efficient genotypes while maintaining simple, cost-effective detection methodology using standard PCR and sequencing techniques, thus avoiding unnecessary device complexity.

Inventive Principle:
Principle #2Taking out (Extraction)

3Measurement precision

If SNP loci screening is performed on the NPY gene to identify feed efficiency traits, then accurate genotyping can be achieved, but the cost and time of analysis increase

Engineering Contradiction:
Improvegenotyping accuracyVSAvoidtime for SNP analysis
Core Design Contradiction:
Measurement precisionVSLoss of time

Solution Approach 1:

The patent applies the principle of using simple, inexpensive, and rapid detection methods rather than complex, expensive, and time-consuming molecular analysis systems. The invention utilizes standard PCR amplification followed by Sanger sequencing to genotype the T/C polymorphism at position 577 of the NPY gene. These are conventional, widely-available techniques that provide accurate genotyping results without requiring specialized equipment or expensive reagents. The method enables high-throughput genotyping of multiple ducks efficiently, achieving both accurate measurement precision and rapid analysis, thereby minimizing time loss while maintaining cost-effectiveness in breeding programs.

Inventive Principle:
Principle #27Cheap short-living objects (Disposable)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

The method provides a simple, rapid, and cost-effective means to detect NPY gene mutations, enabling early selection of ducks with high or fair feed efficiency traits, improving breeding efficiency and reducing the need for specialized instruments.

Implementation Method 1

The SNP loci of Q1 line ducks were screened by using the NPY gene as a candidate gene

Methodology Applied
Scientific EffectPCR (Polymerase Chain Reaction):

Implementation Method 2

PCR-SSCP method

Methodology Applied
Scientific EffectSSCP (Single-Strand Conformational Polymorphism):

Data Source

PatentUS11879160B2Molecular marker for identifying trait of efficiency of duck feed utilization based on neuropeptide gene <i>NPY</i>, method and use thereof
Publication Date: 2024.01.23 ANHUI AGRICULTURAL UNIVERSITY
  • US11879160B2 patent drawing
  • US11879160B2 patent drawing

AI summary

The present disclosure provides a molecular marker for identifying traits of efficiency of duck feed utilization based on a neuropeptide gene NPY, a method and use thereof. The NPY gene has a nucleotide sequence shown in SEQ ID NO: 1, the molecular marker is T or C, and the molecular marker is located at position 577 of the nucleotide sequence. In the present disclosure, mutation of the NPY gene is detected using a polymerase chain reaction-single strand conformation polymorphism (PCR-SSCP) method, the traits of efficiency of duck feed utilization are selected based on genotypes, and a breeding method for early selection of efficiency of poultry feed utilization is established. The method is simple, rapid, and low-cost, does not need special instrument, and satisfies experimental needs.