Peptide Thioester Synthesis via TCFH Coupling and Alkali Cyclization

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Solution Overview

Problem

Current methods for synthesizing peptide thioesters and head-to-tail amide cyclic peptides are complex, expensive, and have low yields, making them unsuitable for mass production.

Innovation Solution

A method involving solid-phase synthesis using TCFH as a coupling reagent for esterification with p-chlorothiophenol and subsequent alkali-catalyzed cyclization to produce high-yield, high-purity peptide thioesters and head-to-tail amide cyclic peptides.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If traditional solid-phase synthesis methods using benzyl bromide or Ellman's reagent are used to synthesize peptide thioesters, then the peptide thioester can be obtained, but the reaction steps increase and reagent costs increase, making the method unsuitable for mass production

Engineering Contradiction:
Improvepeptide thioester synthesis successVSAvoidmass production suitability
Core Design Contradiction:
ReliabilityVSProductivity

Solution Approach 1:

The patent extracts and removes the expensive and complex reagents (benzyl bromide, Ellman's reagent) from the synthesis pathway, replacing them with a simpler, more cost-effective thiol-based cleavage method that directly generates the peptide thioester during the TFA cleavage step, thereby reducing both step count and reagent cost while maintaining synthesis reliability

Inventive Principle:
Principle #2Taking out (Extraction)

Solution Approach 2:

The patent incorporates the thioester formation into the preliminary TFA cleavage step from the resin, so that the peptide thioester is generated in advance during the cleavage process rather than requiring a separate post-cleavage thioesterification step, thus streamlining the overall synthesis pathway for mass production

Inventive Principle:
Principle #10Preliminary action

2Reliability

If carboxypropyl sulfonamide is used as a linking molecule with TMS2CHN2 alkylation and LiBr/THF thioesterification, then peptide thioester can be synthesized, but the synthesis has many steps, complicated operation, harsh reaction conditions, and low yield

Engineering Contradiction:
Improvepeptide thioester synthesis successVSAvoidsynthesis procedure complexity
Core Design Contradiction:
ReliabilityVSDevice complexity

Solution Approach 1:

The patent removes the complex carboxypropyl sulfonamide linking molecule and TMS2CHN2 alkylation step from the synthesis pathway, replacing them with a direct thiol-based cleavage approach that simplifies the overall procedure while maintaining reliable peptide thioester formation

Inventive Principle:
Principle #2Taking out (Extraction)

Solution Approach 2:

The patent changes the reaction conditions from harsh LiBr/THF thioesterification to milder TFA-based cleavage with in-situ thioester formation, and uses TCFH as a coupling reagent instead of PyBop, thereby reducing operational complexity and improving yield while maintaining synthesis reliability

Inventive Principle:
Principle #35Parameter changes

3Reliability

If PyBop is used as a coupling reagent to synthesize peptide thioester, then the reaction can proceed, but the synthesis yield is relatively low and the peptide thioester is not easy to purify

Engineering Contradiction:
Improvepeptide thioester synthesis successVSAvoidsynthesis yield and purification ease
Core Design Contradiction:
ReliabilityVSProductivity

Solution Approach 1:

The patent changes the coupling reagent from PyBop to TCFH (2,4,6-trichloro-1,3,5-triazinyl fluorosulfonate), which provides higher reaction efficiency and better purification characteristics, thereby improving both synthesis yield and ease of purification while maintaining reliable peptide thioester formation

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

The patent employs TCFH as a disposable coupling reagent that is used in stoichiometric amounts and can be easily removed during workup, providing a cost-effective and purification-friendly approach compared to PyBop, which requires more complex purification procedures

Inventive Principle:
Principle #27Cheap short-living objects (Disposable)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

This method provides a simple, efficient, and cost-effective route to synthesizing peptide thioesters and head-to-tail amide cyclic peptides with high yields and wide applicability, overcoming the limitations of previous techniques.

Implementation Method 1

p-chlorothiophenol and C-terminal Boc-protected fully protected peptide are subjected to an esterification reaction under the catalysis of a coupling reagent of TCFH

Methodology Applied
Scientific EffectEsterification reaction: Chemical Bonding

Implementation Method 2

under the action of an alkali, a head-to-tail amide cyclic peptide is obtained

Methodology Applied
Scientific EffectCyclization reaction: Chemical Bonding

Data Source

PatentUS20240076311A1Method for synthesizing peptide thioesters and head-to-tail amide cyclic peptide thereof
Publication Date: 2024.03.07 JIANGSU GENSCRIPT BIOTECH CO LTD
  • US20240076311A1 patent drawing
  • US20240076311A1 patent drawing
  • US20240076311A1 patent drawing

AI summary

A method for synthesizing peptide thioesters and a head-to-tail amide cyclic peptide thereof, which belongs to the technical field of chemical pharmaceuticals and fine chemical preparation. The method comprises the following steps: (1) using resin A as a carrier and using a solid-phase synthesis strategy to obtain a resin peptide; (2) cutting the resin to obtain a fully protected peptide; (3) performing an esterification reaction with p-chlorophenyl thiophenol in a TCFH/alkali condensation system to generate p-chlorophenyl thioester; (4) removing the protecting group to obtain a peptide thioester; and (5) further cyclizing to obtain a head-to-tail cyclic peptide. The preparation of the thioester peptide and the head-to-tail amide cyclic peptide provides a simple technical route with wide universality and a high yield, and has a wide range of applications in the technology of chemical pharmaceuticals and fine chemical preparation.