Recombinant Yeast Strain for Bioethanol Production

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Solution Overview

Problem

Current yeast strains used for bioethanol production face challenges in efficiently propagating on low nutritional media and resisting fermentation inhibitors, leading to suboptimal biomass production and ethanol yield.

Innovation Solution

A recombinant yeast strain is developed by crossing a genetically modified strain with a wild strain, incorporating additional copies of the xylose isomerase and D-xylulokinase genes, followed by genome shuffling and selection for improved xylose metabolism and growth on low nutritional media, along with overexpression of the GAL2 gene for enhanced xylose uptake.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If conventional yeast strains are used for bioethanol production, then the fermentation process can be maintained with standard procedures, but the propagation efficiency on low nutritional media is insufficient and resistance to fermentation inhibitors is poor

Engineering Contradiction:
Improveresistance to fermentation inhibitorsVSAvoidpropagation efficiency on low nutritional media
Core Design Contradiction:
ReliabilityVSProductivity

Solution Approach 1:

The patent modifies the yeast strain's genetic parameters by introducing additional copies of xylose metabolism genes (XYL1, XYL2, XKS1) and overexpressing the GAL2 transporter gene. This genetic parameter change enables the yeast to efficiently metabolize xylose and propagate on low nutritional media while maintaining resistance to fermentation inhibitors present in lignocellulosic hydrolysates

Inventive Principle:
Principle #35Parameter changes

Solution Approach 2:

The patent creates a composite genetic structure by combining multiple gene copies and overexpression systems within the yeast genome. The strain integrates xylose isomerase genes, xylulokinase genes, and enhanced xylose transporters into a unified genetic system that works synergistically to improve both propagation efficiency and inhibitor resistance

Inventive Principle:
Principle #40Composite materials

2Productivity

If genetically modified strains with enhanced xylose metabolism are developed, then xylose fermentation capability is improved, but the complexity of strain development and optimization increases

Engineering Contradiction:
Improvexylose fermentation capabilityVSAvoidstrain development complexity
Core Design Contradiction:
ProductivityVSDevice complexity

Solution Approach 1:

The patent segments the xylose metabolism enhancement into distinct functional modules: xylose transport (GAL2 overexpression), xylose isomerization (XYL1 gene), and xylulokinase activity (XYL2 and XKS1 genes). Each module can be independently optimized and combined, simplifying the overall strain development process while achieving comprehensive xylose fermentation capability

Inventive Principle:
Principle #1Segmentation

Solution Approach 2:

The patent uses the GAL2 gene, which originally functions in glucose transport, and repurposes it for xylose transport through overexpression. This multi-functional approach leverages existing yeast genetic resources to achieve xylose metabolism enhancement without requiring entirely new gene discoveries, thereby reducing development complexity

Inventive Principle:
Principle #6Universality (Multi-functionality)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

The resulting strain effectively propagates on low nutritional media, maintains high xylose metabolism, and exhibits improved resistance to fermentation inhibitors, resulting in enhanced ethanol production and biomass yield.

Implementation Method 1

overexpression of the GAL2 gene for enhanced xylose uptake

Methodology Applied
Scientific EffectActive transport:

Implementation Method 2

incorporating additional copies of the xylose isomerase and D-xylulokinase genes

Methodology Applied
Scientific EffectCatalysis: Catalysis

Implementation Method 3

incorporating additional copies of the xylose isomerase and D-xylulokinase genes

Methodology Applied
Scientific EffectCatalysis: Catalysis

Implementation Method 4

the fermentation of fermentable sugars which must be robust, fast, and use all of the available sugars

Methodology Applied
Scientific EffectFermentation: Fermentation

Data Source

PatentUS10273447B2Pentose-fermenting strain with optimized propagation
Publication Date: 2019.04.30 LESAFFRE & CIE
  • US10273447B2 patent drawing
  • US10273447B2 patent drawing
  • US10273447B2 patent drawing

AI summary

The present invention relates to a method for obtaining a strain capable of efficiently propagating in a low nutritive potential medium, capable of metabolizing pentoses and of resisting fermentation inhibitors, comprising the following steps; a) growth of a strain of recombinant yeast with a strain of wild yeast lacking any impairments, the recombinant yeast strain comprising at least one copy of an exogenous gene of xylose isomerase and at least one additional copy of a gene of D-xylulokinase included in the genome and linked to a single sexual characteristic of the strain, b) at least two cycles of genome shuffling by sporulation and or random hybridization, c) selection of the population obtained in step b) according to a suitability criterion of the strains to metabolize xylose, d) selection of the population obtained in step c) according to a suitability criterion of the strains to grow in a Pref type medium, a medium with low nutritive value. The invention also relates to a cell, a yeast or a strain of recombinant yeast obtained according to the method, and to the use of such a cell for the production of bioethanol.