Trimeric Peptide-Oligonucleotide Conjugates for Antisense Delivery

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Solution Overview

Problem

Current antisense technology oligonucleotides and peptide-oligonucleotide-conjugates have limitations in terms of antisense or antigene performance, necessitating the development of improved compounds for therapeutic, diagnostic, and research applications.

Innovation Solution

The development of trimeric peptide-oligonucleotide-conjugates, where an oligonucleotide is covalently bound to a trimeric peptide, enhancing the delivery and efficacy of oligonucleotides into cells.

Engineering Contradictions & Design Principles

VSEngineering Contradiction Analysis

1Reliability

If oligonucleotides are used for antisense therapy, then gene expression can be modulated, but cellular uptake and delivery efficiency are limited

Engineering Contradiction:
Improveantisense performanceVSAvoidcellular uptake
Core Design Contradiction:
ReliabilityVSProductivity

Solution Approach 1:

The invention creates a composite material by covalently conjugating oligonucleotides with trimeric cell-penetrating peptides. This composite structure combines the gene-modulating capability of oligonucleotides with the cell-penetration ability of peptides, achieving both reliable antisense performance and improved cellular uptake efficiency

Inventive Principle:
Principle #40Composite materials

Solution Approach 2:

The trimeric cell-penetrating peptide acts as an intermediary that facilitates the delivery of oligonucleotides into cells. The peptide conjugate serves as a mediator that enables efficient cellular uptake while maintaining the oligonucleotide's antisense function

Inventive Principle:
Principle #24Intermediary (Mediator)

2Productivity

If single CPP-oligonucleotide conjugates are used, then delivery is improved, but efficacy is still limited compared to trimeric conjugates

Engineering Contradiction:
Improvedelivery efficiencyVSAvoidefficacy
Core Design Contradiction:
ProductivityVSReliability

Solution Approach 1:

The invention merges three cell-penetrating peptide units with the oligonucleotide to form a trimeric conjugate. This combination enhances both delivery efficiency and therapeutic efficacy by providing multiple cell-penetration domains that work synergistically to improve cellular internalization and functional performance

Inventive Principle:
Principle #5Merging (Combining)

Applied Scientific Principles

This section explains which scientific principles are used to turn an abstract innovation direction into a practical engineering solution.

Function Achieved in This Case

The trimeric peptide-oligonucleotide-conjugates demonstrate improved cellular uptake and efficacy compared to unconjugated oligonucleotides and single CPP-oligonucleotide conjugates, potentially leading to more effective therapeutic outcomes.

Implementation Method 1

an antisense compound, e.g., an oligonucleotide, which hybridizes to a target nucleic acid, modulates gene expression activities

Methodology Applied
Scientific EffectHybridization:

Implementation Method 2

trimeric peptide-oligonucleotide-conjugates comprising an oligonucleotide covalently bound to a trimeric peptide

Methodology Applied
Scientific EffectCovalent binding: Chemical Bonding

Data Source

PatentUS20250161469A1Trimeric peptides for antisense delivery
Publication Date: 2025.05.22 SAREPTA THERAPEUTICS INC
  • US20250161469A1 patent drawing
  • US20250161469A1 patent drawing
  • US20250161469A1 patent drawing

AI summary

Provided herein are oligonucleotides, trimeric peptides, and peptide-oligonucleotide-conjugates. Also provided herein are methods of treating a muscle disease in a subject in need thereof, comprising administrating to the subject oligonucleotides, trimeric peptides, and peptide-oligonucleotide-conjugates described herein.