A computer-based method maps spatial relationships between query ligand substructures and target macromolecules to generate 3-D structural models.
Computational method predicts ligand modifications by mapping non-bonding atom contacts to protein binding sites.
Computational protocol identifies cryptic binding pockets in tau protein fragments to stabilize specific conformations and prevent aggregation.
A binding assay method utilizes saturated receptor measurement in n-curve analysis to determine Kd and Rt values without completing the full concentration range.
Computational method partitions lead compounds into core and non-core regions to identify alternative cores.
A method segments organic molecules into standardized fragments to automatically generate all possible stereoisomer combinations.
Target neural network processes molecular representations via distributed parallel computing to accelerate retrosynthesis route generation.
A computational drug discovery system performs pose and free energy calculations to determine ligand-receptor interactions.
Multi-level graph prompt learning integrates entity and interaction graphs to resolve the accuracy-complexity trade-off in drug reaction prediction.
Continuous latent space optimization via variational autoencoders enables gradient-based scaffold decoration for specific protein targets.
A reinforcement learning model infers molecular structures using a tree representation with site information to maintain connection data.
Transition state analogs mimic DNMT1 geometry to inhibit enzyme activity, avoiding mutagenic DNA incorporation found in current cancer therapies.
Computational docking predicts drug efficacy against individual mutations, reducing development time and side effects.