Cancer subtype identifier and method for classifying tumors

A cancer subtype identifier using PSI values from exon usage events and RNA expression classifies tumors into MXE1 and MXE2 subtypes, addressing the limitations of existing methods by providing accurate prognosis and enabling personalized treatment strategies.

WO2026132084A2PCT designated stage Publication Date: 2026-06-25INDIVUMED GMBH

Patent Information

Authority / Receiving Office
WO · WO
Patent Type
Applications
Current Assignee / Owner
INDIVUMED GMBH
Filing Date
2025-12-17
Publication Date
2026-06-25

AI Technical Summary

Technical Problem

Existing methods for classifying cancer subtypes and predicting prognosis are inadequate, particularly for colorectal cancer, due to limitations in molecular subtyping methods that lack precision and dynamic range, and do not account for patient variability within the same stage, leading to potential over-treatment and ineffective treatment regimens.

Method used

A cancer subtype identifier utilizing percent spliced-in (PSI) values derived from mutually exclusive exon usage events, expression of small nuclear RNAs, and protein-coding genes to classify tumors into MXE1 and MXE2 subtypes, which are associated with distinct prognoses, enabling more accurate patient stratification and treatment selection.

Benefits of technology

The method provides a reliable and cost-effective way to classify tumors into MXE1 and MXE2 subtypes, independent of conventional models, refining patient prognosis and enabling tailored treatment options based on the underlying biology of splicing and expression patterns, improving treatment efficacy and reducing over-treatment.

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Abstract

The present invention relates to a cancer subtype identifier, which classifies tumors and a method based thereon. Further it relates to a method and a kit for predicting the prognosis for a subject suffering from cancer. Moreover, it relates to a method for treating a subject suffering from cancer. Further, the invention relates to the use of the cancer subtype identifier.
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