Avitusumab for the treatment of colorectal cancer
Abituzumab, targeting αv integrins, particularly αvβ6, in combination with standard therapies, enhances treatment efficacy for colorectal cancer by improving survival rates in patients with high αvβ6 expression, addressing the limitations of current treatments.
Patent Information
- Application Number
- JP2021521247
- Authority / Receiving Office
- JP · JP
- Patent Type
- Patents
- Current Assignee / Owner
- Priority Date
- 2018-10-19
- Filing Date
- 2019-10-18
- Publication Date
- 2024-12-10
- Estimated Expiration
- 2039-10-18
AI Technical Summary
Current treatments for colorectal cancer, particularly metastatic colorectal cancer, have limited efficacy and do not adequately address the progression and metastasis of the disease, especially in patients with high expression of αvβ6 integrin, leading to poor prognosis and survival rates.
The use of the anti-α-V integrin receptor antibody, avituzumab, which targets and inhibits αv integrins, particularly αvβ6, in combination with standard therapies such as cetuximab and chemotherapy, to treat colorectal cancer, especially in patients with high αvβ6 expression, thereby inhibiting tumor growth and angiogenesis.
Abituzumab significantly improves progression-free survival and overall survival in patients with high αvβ6 expression, particularly in left-sided colorectal cancer, when combined with cetuximab and irinotecan, offering a more effective treatment approach than standard therapies alone.
Smart Images

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Abstract
Description
[Technical field]
[0001] CROSS-REFERENCE TO RELATED APPLICATIONS This application claims the benefit of Provisional Application No. 62 / 748,114, filed October 19, 2018, which is incorporated by reference in its entirety.
[0002] The present invention relates to a method for the treatment of colon cancer, said treatment comprising the administration of the anti-α-v integrin (receptor) antibody abituzumab. Preferably, the present invention relates to a method for treating colon cancer, stages II-IV colon cancer, metastatic colon cancer, left-sided colon cancer and / or left-sided metastatic colon cancer, comprising the administration of said abituzumab to a patient in need thereof. More preferably, the present invention relates to a method for treating colon cancer, preferably of the above types or stages of colon cancer, comprising the administration of the anti-α-v integrin (receptor) antibody abituzumab in addition to an existing treatment or treatment regimen for said types or stages of colon cancer. Thus, the present invention also relates to the use of abituzumab for the manufacture of a medicament for the treatment of colon cancer, preferably colon cancer as defined herein, and / or the concept of suitable targeted therapy, such as monoclonal antibodies targeting growth factors or growth factor receptors, and / or the use of abituzumab for the manufacture of a medicament for the treatment of colon cancer in combination with chemotherapy. [Background technology]
[0003] Colorectal cancer (commonly known as colon cancer, rectal cancer, and / or intestinal cancer) is cancer that begins in the colon or rectum (parts of the large intestine), typically due to the abnormal growth of cells that have the ability to invade and metastasize to other parts of the body. Currently, treatments for colorectal cancer include surgery, radiation therapy, chemotherapy, and targeted therapy. Cancer that is confined to the colon wall may be cured by surgery, but widespread cancer is usually incurable and involves management focused on improving quality of life or symptoms. The 5-year survival rate in the United States is about 65%. However, this depends on how advanced the cancer is, whether surgery can remove all of the cancer, and the person's overall health. Colorectal cancer is the third most common cancer worldwide, accounting for about 10% of all cancer cases. In 2012, there were 1.4 million new cases and 694,000 deaths. It is more prevalent in developed countries, accounting for more than 65% of cases. It affects fewer women than men.
[0004] For both colon and rectal cancer, chemotherapy may be used in addition to surgery, and in the case of rectal cancer, chemotherapy may be used in a neoadjuvant setting. If the cancer has spread to the lymph nodes, the addition of chemotherapy agents fluorouracil or capecitabine improves survival. If the lymph nodes are free of cancer, the efficacy of chemotherapy is controversial. For widespread or unresectable cancer, palliative treatment has been the focus. In general, several different chemotherapy agents may be used in this situation. Chemotherapy agents for this disease may include capecitabine, fluorouracil, irinotecan, leucovorin, oxaliplatin, and UFT. Preferably, fluorouracil may be administered as a prodrug, such as capecitabine and / or 5-fluorocytosine. Epidermal growth factor receptor inhibitors may also be used. Combining radiation and chemotherapy may be effective in rectal cancer but is not typically used in colon cancer because the bowel is sensitive to radiation. As with chemotherapy, radiation therapy can be used in neoadjuvant and adjuvant settings in some stages of rectal cancer.
[0005] However, the indication colorectal cancer (CRC) is known and widely understood in the art. Preferably, colorectal cancer is a heterogeneous disease that can be distinguished by characteristics such as, but not limited to, the location of onset, the type of tissue affected, and / or the stage of the disease at which it occurs. Staging of colorectal cancer is widely known and understood in the art. Preferably, the different stages of onset are classified into four or five categories, preferably into four categories. The earliest colorectal cancer is preferably classified as "Stage 0" (very early cancer), followed by stages I (1) through IV (4). As a general rule, a lower number means less onset, progression, and / or metastasis of the cancer. A higher number, such as stage IV, means the cancer has spread further. And within a stage, the previous letter preferably refers to the lower stage. Although everyone experiences cancer differently, cancers at similar stages often have similar outlooks and are treated in roughly the same way. The American Joint Committee on Cancer (AJCC) TNM classification is often used to stage colorectal cancer and is based on three basic pieces of information. Tumor (T) extent (size): how far the cancer has grown into the wall of the colon or rectum. These layers, shown in Figure 1, go from inner to outer and include: The inner layer (mucosa) is where almost all colon cancers begin. It contains a thin layer of muscle (muscularis mucosae). - Fibrous tissue underneath this muscle layer (submucosa) ○ Thick muscle layer (muscularis propria) The outermost layer of thin connective tissue (subserosa and serosa) that covers most of the colon but not the rectum · Nearby Lymph Node Spread (N): Has the cancer spread to nearby lymph nodes? · Spread to distant sites (metastasis) (M): Whether the cancer has spread to distant lymph nodes or distant organs such as the liver or lungs.
[0006] The system presented below is the latest AJCC system, effective as of January 2018. It uses a pathological stage (also called surgical stage) that is determined by examining tissue removed during surgery. This system is also called surgical staging. It is likely to be more accurate than clinical staging, which considers the results of physical exams, biopsies, and imaging studies, and is preferably performed before surgery. The numbers or letters after T, N, and M provide more detail about each component. The higher the number, the more advanced the cancer. Once the T, N, and M categories have been determined, this information is combined in a process called stage grouping to assign an overall stage. [Table 1] TIFF0007597450000002.tif192146 TIFF0007597450000003.tif67150 *The following additional categories are not listed in Table 1 above: · TX: Primary tumor cannot be assessed due to lack of information. · T0: No evidence of primary tumor. · NX: Regional lymph nodes cannot be assessed due to insufficient information.
[0007] Colon cancer is more commonly classified into four stages: Stage I, Stage II, Stage III, and Stage IV. The higher the stage, the more advanced the colon cancer. Preferably, Stage I means that cancer can be diagnosed in a particular location in the colon, but has not yet actually started to grow. Stage II colon cancer means that the tumor has grown in its original colon location but has not spread beyond it, whereas Stage III means that the cancer has spread outside of its original colon location, for example via metastasis, but only to a minimal extent. Often, Stage III colon cancer has only metastasized to nearby tissues, such as adjacent tissues and nearby lymph nodes. Finally, Stage IV means that the cancer has spread outside of its original location in the colon area to other tissues, such as distant lymph nodes, bone, liver, lungs, and / or brain. See, for example, Matias Riihimaki, Akseli Hemminki, Jan Sundquist, Kari Hemminki, Scientific Reports|6:29765|DOI:10.1038 / srep29765, the disclosure of which is preferably incorporated herein by reference in its entirety.
[0008] Since 1996, the treatment options for CRC and / or mCRC have expanded with the introduction of chemotherapy such as irinotecan and oxaliplatin, and molecular targeted drugs such as cetuximab, panitumumab, aflibercept, regorafenib, and bevacizumab. Currently, combination chemotherapy regimens including 5-FU and irinotecan are established as treatments for colorectal cancer, especially advanced colorectal cancer. These have improved the prognosis of patients, but most patients still die from the disease. With the advancement of molecular biology understanding of CRC and the emerging knowledge that laterality influences treatment outcome, it is expected that new combination therapies targeting factors essential for tumor growth and progression will lead to improved patient outcomes. Essentially, existing mCRC treatments are based on five different mechanisms of action to destroy tumor cells: inhibition of thymidylate synthase, DNA intercalation (platinum compounds), targeting topoisomerase I (irinotecan), and therapies targeting growth factors or growth factor receptors, including but not limited to EGF (epidermal growth factor), EGFR (epidermal growth factor receptor), VEGF (vascular endothelial growth factor), and / or VEGFR (vascular endothelial growth factor receptor).
[0009] The use of integrin inhibitors is believed to affect both cancer cell survival and angiogenesis, since integrins are expressed on tumor cells as well as endothelial cells. Although it is difficult to distinguish between effects on tumor growth and effects on angiogenesis, the greatest response of these inhibitors is predicted when the targeted integrin is expressed on both tumor cells and endothelial cells. Bone is one of the frequent metastatic sites for various cancers, including but not limited to CRC. Bisanz et al. (Molecular Therapy 2005; 12, 634-643) have shown that α-v integrin plays a positive role in, for example, prostate tumor survival in bone. Furthermore, studies (McCabe et al., Oncogene 2007; 26, 6238-6243) have shown that activation of αvβ3 integrin in tumor cells is essential for the recognition of key bone-specific matrix proteins. These data suggest that αvβ3 integrin regulates cancer growth in distant metastases. It is hypothesized that integrins mediate the interaction between tumor cells and the bone microenvironment and promote their growth in bone, so that the use of integrin inhibitors makes it possible to prevent bone lesions in CRC cancer. These lesions, preferably osteoblastic and / or osteolytic, are frequently detected in cancer patients. In some cancers, bone metastases are found in more than 80% of patients at autopsy. Furthermore, immunohistochemical analysis has demonstrated the presence of αv integrins in the majority of human CRC cancer tissues. Thus, there is a growing need to provide new highly active therapeutic agents and / or highly efficient therapeutic methods for the treatment of colorectal cancer.A preferred object of the present invention is therefore to provide humans, in particular human patients suffering from colorectal cancer (CRC) and / or their metastases, in particular metastatic colorectal cancer (mCRC), with more effective and better tolerated treatment regimens, preferably independent of the location of metastases, thus preferably resulting in an increase in overall survival (OS), progression-free survival (PFS), quality of life (QOL), and / or median survival. Summary of the Invention
[0010] According to the present invention, the high need to provide new highly potent therapeutic agents for the treatment of colon cancer is met by the use of the anti-α-v integrin (receptor) antibody abituzumab in a method for the treatment of colon cancer in patients with tumors and / or metastases with high integrin expression, in particular with high expression of αvβ6 integrin. More preferably, the high need to provide new highly potent therapeutic agents for the treatment of colon cancer is met by the provision of the anti-α-v integrin (receptor) antibody abituzumab, preferably suitable for left-sided colon cancer, more preferably left-sided metastatic colon cancer, in particular for patients with tumors and / or metastases with high integrin expression, in particular with high expression of αvβ6 integrin. Preferably, the high, hitherto unmet need to provide new highly efficient therapeutic methods for the treatment of colon cancer is also met by the present invention. In this regard, avituzumab has been shown to have favorable direct and indirect antitumor effects in colon cancer.
[0011] Avitusumab is a recombinant humanized monoclonal IgG2 antibody antagonist directed against the α-β subunits of human integrin receptors. Avitusumab is a pan-integrin inhibitor specific for αv integrins and inhibits all αv heterodimers (αvβ1, β3, β5, β6, and β8). In particular, avituzumab inhibits αvβ6, which is highly active in metastatic colorectal cancer and has been discussed as a negative prognostic factor for this disease (Bates RC, Bellovin DI, Brown C, et al. “Transcriptional activation of integrin β6 during the epithelial-mesenchymal transition defines a novel prognostic indicator of aggressive colon carcinoma”. The Journal of Clinical Investigation.2005 115 (2):339-347; Niu Z, Wang J, Muhammad S, et al. “Protein expression of eIF4E and integrin αvβ6 in colon cancer can predict clinical significance, reveal their correlation and imply possible mechanism of interaction” Cell & Bioscience.2014 ; Yang GY, Guo S, Dong CY, et al. “Integrin αvβ6 sustains and promotes tumor invasive growth in colon cancer progression”. World Journal of Gastroenterol.2015; 21(24):7457-7467), the disclosures of which are preferably incorporated herein by reference in their entireties.Integrins are a type of cell adhesion molecule that play a role in a wide range of cell-extracellular matrix (ECM) and cell-cell interactions (Arnaout MA, Goodman SL, Xiong JP Structure and mechanics of integrin-based cell adhesion. Curr Opin Cell Biol. 2007;19(5):495-507), the disclosures of which are preferably incorporated herein by reference in their entirety. Integrins are heterodimeric transmembrane receptors of ECM proteins consisting of alpha (α) and beta (β) subunits. They are activated upon binding to their respective ECM ligands. Following this interaction, integrins trigger intracellular kinase cascades to regulate cell proliferation and survival, and to associate with the actin cytoskeleton to promote cell adhesion and motility (Goel HL, Languino LR. Integrin signaling in cancer. Cancer Treat Res. 2004;119:15 31, the disclosures of which are preferably incorporated herein by reference in their entirety). α-v-integrins are highly expressed on angiogenic and proliferating tumor blood vessels and on certain tumor cells. Members of the αvβ6 integrin family have been demonstrated to play a direct role in tumor progression, tumor angiogenesis, and metastasis (Nemeth JA, Nakada MT, Trikha M, et al. α-v integrins as therapeutic targets in oncology. Cancer Invest. 2007;25(7):632-646, the disclosures of which are preferably incorporated herein by reference in their entirety).
[0012] In accordance with the present invention, targeting integrins, including but not limited to αvβ6, with avituzumab in CRC patients with high integrin expression, preferably CRC patients with high αvβ6 integrin expression, is believed to be a surprisingly advantageous novel approach for the treatment of CRC and / or mCRC, particularly when combined with other targeted therapeutics and / or chemotherapies that have shown efficacy in CRC and / or mCRC. Thus, preferred subject matter of the invention includes one or more of the following: Preferably, the method of treating colon cancer in a human or humans comprises administering avituzumab to a human (or humans), wherein the colon cancer is characterized by high αvβ6 integrin expression or has high αvβ6 integrin expression, in a manner described above and / or below. Preferably, a method for treating colorectal cancer in a human or human population as described above and / or below, comprising administering avituzumab to a human(s), wherein said colorectal cancer is left-sided colorectal cancer. Preferably, a method for treating left-sided colon cancer as described above and / or below, comprising administering avituzumab to a human(s), wherein the left-sided colon cancer is characterized by or has high αvβ6 integrin expression. The method according to any of the above and / or below, wherein the colon cancer is metastatic colon cancer. The method described above and / or below, wherein avituzumab is administered to a human(s) in an amount of about 1000 milligrams every two weeks or in an amount of about 2000 milligrams per month. A method as described above and / or below, wherein the human(s) also receive a monoclonal antibody targeting at least one growth factor or growth factor receptor, and / or chemotherapy. The method as described above and / or below, wherein the human(s) also receives one or more of the therapeutic options that are the current standard of care (SoC) in the treatment of colorectal cancer as described above and / or below. The method according to any one of the above and / or below, a) the colorectal cancer is RAS wild-type and / or KRAS wild-type left-sided colorectal cancer or RAS wild-type and / or KRAS wild-type left-sided metastatic colorectal cancer; b) the human is also provided with a monoclonal antibody, preferably cetuximab, that targets at least one growth factor or growth factor receptor; and c) The human may optionally be treated with chemotherapy according to the FOLFIRI or FOLFOX protocol, preferably with chemotherapy according to the FOLFIRI protocol; The method. Further aspects of the invention are described in more detail below. [Brief description of the drawings]
[0013] [Figure 1] 1 shows the general structure of human intestinal tissue and the layers of the large intestine wall. [Diagram 2] This is the OS curve (POSEIDON) based on the expression level of αvβ6 in the cetuximab + irinotecan alone group, with the lower curve representing αvβ6>median and the upper curve representing αvβ6<median at 24 months. [Diagram 3] OS curves based on high expression of αvβ6 for patients with tumors on both the right and left sides treated with avituzumab + cetuximab + irinotecan and cetuximab + irinotecan alone (SOC) (POSEIDON), where SoC is the lowest curve after 24 months; avituzumab 500 mg is the median curve after 24 months; and avituzumab 1000 mg is the highest curve after 24 months. [Figure 4] FIG. 1 is a CONSORT diagram for the phase 2 portion of the study. [Figure 5A] The Kaplan-Meier curves for PFS in the ITT population are shown, with SoC, avituzumab 500 mg, and avituzumab 1,000 mg all showing the same curve at 16 months. [Figure 5B]Kaplan-Meier curves for OS in the ITT population are shown, with SoC representing the median of the curve at 24 months; avituzumab 500 mg representing the lowest value of the curve at 24 months; and avituzumab 1000 mg representing the highest value of the curve at 24 months. [Figure 6] Histogram showing αvβ6 histoscores for all patients with available tumor blocks (n=197) and the median histoscore for this population (70). For each patient, data on the intensity and frequency of αvβ6 staining were pooled to generate a histoscore using the following formula: 1×(percentage of weakly stained cells [1+]) + 2×(percentage of moderately stained cells [2+]) + 3×(percentage of strongly stained cells [3+])
[12] . [Figure 7] In the OS curves for patients with high and low αvβ6 expression who received cetuximab and irinotecan alone (POSEIDON trial), αvβ6>median is the lower curve at 24 months; αvβ6<median is the upper curve at 24 months; CI is confidence interval; HR is hazard ratio. [Figure 8] In patients with both right-sided and left-sided tumors, OS curves (POSEIDON trial) for patients with high αvβ6 expression treated with avituzumab + cetuximab + irinotecan and cetuximab + irinotecan alone (SOC) showed that SoC was the lowest curve at 24 months; avituzumab 500 mg was the median of the curve at 24 months; avituzumab 1000 mg was the highest of the curve at 24 months; CI is confidence interval; HR is hazard ratio; SoC indicates standard of care. [Figure 9A] The results of a retrospective analysis of OS in left-sided patients with high expression of αvβ6 (POSEIDON trial) showed that SoC was at the lowest point of the curve at 24 months; avituzumab 500 mg was at the median point of the curve at 24 months; avituzumab 1000 mg was at the highest point of the curve at 24 months. [Figure 9B]Showing the results of a retrospective analysis of OS in right-sided patients with high αvβ6 expression (POSEIDON trial), SoC was at the lowest point of the curve at 18 months; avituzumab 500 mg was at the median point of the curve at 18 months; and avituzumab 1000 mg was at the highest point of the curve at 18 months. DETAILED DESCRIPTION OF THE PREFERRED EMBODIMENTS
[0014] Histochemical data show that αv integrin targets are expressed on tumor vasculature and tumor cells in CRC and / or mCRC. In particular, the expression of αvβ6 integrin has been analyzed in more than 700 mCRC patients and has attracted attention as a prognostic factor for CRC (Bates RC, Bellovin DI, Brown C, et al. “Transcriptional activation of integrin β6 during the epithelial-mesenchymal transition defines a novel prognostic indicator of aggressive colon carcinoma”. The Journal of Clinical Investigation. 2005; 115 (2):339-347; Niu Z, Wang J, Muhammad S, et al. “Protein expression of eIF4E and integrin αvβ6 in colon cancer can predict clinical significance, reveal their correlation and imply possible mechanism of interaction” Cell & Bioscience. 2014; Yang GY, Guo S, Dong CY, et al. “Integrin αvβ6 sustains and promotes tumor invasive growth in colon cancer progression”. World Journal of Gastroenterol. 2015; 21(24):7457-7467), the disclosures of which are preferably incorporated herein by reference in their entireties. Thus, according to the present invention, high expression of αvβ6 in colon and / or rectal cancer tumors is believed to be indicative of tumor progression and poor survival in these patients.
[0015] Recently, data from the POSEIDON trial were re-evaluated (Elez E, Kocakova I, Hohler T, et al. Abituzumab combined with cetuximab plus irinotecan versus cetuximab plus irinotecan alone for patients with KRAS wild-type metastatic colorectal cancer: the randomised phase I / II POSEIDON trial. Annals of Oncology. 2015;26: 132-140, the disclosures of which are preferably incorporated herein by reference in their entirety) to explore the activity of abiutuzumab combined with cetuximab and irinotecan in second-line KRAS WT mCRC, and analysis of the cetuximab + irinotecan alone group showed that high expression of αvβ6 was associated with a poorer prognosis, and preferably high expression of αvβ6 was responsible for the poorer prognosis (Figure 2). Furthermore, a recent re-evaluation of data from the POSEIDON trial showed that patients with high αvβ6 expression had a higher PFS when treated with avituzumab, indicating that high αvβ6 expression is favorably predictive of response to avituzumab.
[0016] Furthermore, with regard to avituzumab treatment, it was found that there is growing evidence that CRC, especially mCRC, is a genetically heterogeneous disease and that tumors arising from different sides of the colon (left and right) have different clinical outcomes (Bever KM, Le DT. An Expanding Role for Immunotherapy in Colorectal Cancers. Journal of the National Comprehensive Cancer Network. 2017;15(3):401-410; Lee MS, Menter DG, Kopets S. Right Versus Left Colon Cancer Biology: Integrating the Consensus Molecular Subtypes. Journal of the National Comprehensive Cancer Network. 2017;15(3):411-419, Lee B, et al. Left versus right sided colorectal cancer: Teasing out drivers of disparity in outcomes in metastatic disease. Journal of Clinical Oncology. 2017;35:4_suppl, (682-682, the disclosures of which are preferably incorporated herein by reference in their entireties.) Comparative analysis of the activity of different classes of targeted agents in KRAS wild-type (WT) or RAS wild-type mCRC patients may suggest that primary tumor location (side) may indicate both prognostic and predictive clinical outcomes in mCRC.
[0017] A retrospective analysis was conducted to determine the prognostic and predictive impact of primary tumour location in patients with unresectable RAS WT and / or KRAS WT mCRC enrolled in six randomised trials (CRYSTAL, FIRE-3, CALGB 80405, PRIME, PEAK, 20050181) comparing chemotherapy plus EGFR antibody therapy (experimental arm) with chemotherapy or chemotherapy plus bevacizumab (control arm). Hazard ratios (HRs) and 95% confidence intervals (CIs) for overall survival (OS) and progression-free survival (PFS) and odds ratios (ORs) for objective response rate (ORR) were estimated by pooling HR / ORs from individual studies. 10 . The correlation between treatment response and tumor side was retrospectively evaluated to assess predictability.The results showed that, among 5,760 patients randomized across six trials, 2,159 patients (37.5%) were examined for primary tumor location and RAS gene mutation status, and patients with right-sided tumors had a significantly worse prognosis than those with left-sided tumors in both the pooled control and experimental groups (OS (HR 2.03 (95% CI: 1.69-2.42) and 1.38 (1.17-1.63)), PFS (HR 1.59 (1.34-1.88) and 1.25 (1.06-1.47)), and ORR (OR 0.38 (0.28-0.50) and 0.56 (0.43-0.73)). In terms of predictive efficacy, chemotherapy plus EGFR antibody therapy was associated with a significant benefit in OS and PFS in patients with left-sided tumors (HR 0.75 (0.67-0.84) and 0.78 (0.70-0.87), respectively), whereas it was not associated with a significant benefit in OS and PFS in patients with right-sided tumors (HR 1.12 (0.87-1.45) and 1.12 (0.87-1.44), respectively, P values <0.001 and 0.002, respectively. Regarding ORR, there was a trend (P value 0.07) towards a greater benefit of chemotherapy plus EGFR antibody therapy in patients with left-sided tumors (HR 2.12 (1.77-2.55)) compared with patients with right-sided tumors (HR 1.47 (0.94-2.29)). This analysis shows that in patients with RAS WT and / or KRAS WT mCRC, patients with right-sided tumors had a worse prognosis for OS, PFS, and ORR compared with patients with left-sided tumors, there is a predictive effect of tumor side, and chemotherapy plus cetuximab is more effective than chemotherapy or chemotherapy plus bevacizumab, with the benefit being greatest in patients with left-sided tumors, although the results are based on a subpopulation of patients from these studies and the analysis was performed retrospectively.
[0018] Non-clinical trial data αv-integrin is expressed on a variety of tumor cells in primary and metastatic tumors across many tumor indications, tumor-infiltrating vasculature, and tumor stromal cells. Preferably, Avituzumab has the ability to inhibit tumor progression by inhibiting angiogenesis, by modifying the stroma, and / or by directly targeting tumor cells. In vitro, Avituzumab has been shown to favorably inhibit multiple aspects of tumor angiogenesis, including endothelial cell adhesion to EMC, focal contact destabilization, endothelial cell migration, angiogenic growth factor signal transduction, and / or endothelial cell viability. In vivo, the angiogenesis inhibitory effect of Avituzumab has been favorably demonstrated in various animal models. Avitusumab also preferably acts directly on tumor cells. Avitusumab preferably reduces the adhesion of tumor cells to αv integrin ligands. Avitusumab preferably inhibits tumor growth in multiple tumor xenograft models of different indications with different expression levels of αv-integrin heterodimer. Avitusumab can be shown to enhance the effect of multiple chemotherapeutic agents and cetuximab in various models, in addition to monotherapy. A safety pharmacology evaluation in a repeated-dose toxicity study of avituzumab in cynomolgus monkeys revealed no findings related to major body systems, such as the circulatory or respiratory systems, or clinical behavior. A 6-month chronic intravenous toxicity study revealed no treatment-related disturbances in electrocardiogram parameters, including heart rate and QTc interval. In summary, the scientific evidence provided herein supports the use of avituzumab as an agent with anti-angiogenic and direct anti-tumor activity, which, when administered alone or in combination with standard of care (SoC) treatment options, or preferably in combination with growth factor targeting monoclonal antibodies, including but not limited to cetuximab, or growth factor receptor targeting monoclonal antibodies and / or chemotherapy, preferably as described herein, can provide a surprisingly advantageous therapeutic concept for the treatment of colorectal cancer, in particular metastatic colorectal cancer.
[0019] Clinical Trial Data Phase I / II study in patients with KRAS WT mCRC EMR 62242-004 "POSEIDON Test 7 " is an open-label, multicenter, randomized, controlled Phase I / II study investigating avituzumab in two doses (500 mg and 1,000 mg IV) in combination with cetuximab plus irinotecan, or cetuximab plus irinotecan alone, as second-line treatment of patients with KRAS mutated mCRC. Patients with KRAS WT mCRC were eligible to enroll if their disease was refractory or progressive to first-line chemotherapy with an oxaliplatin-containing regimen. This is a Phase I / II dose-finding / safety study to determine the safety and tolerability profile of repeated administration of different dose levels of avituzumab in combination with cetuximab plus irinotecan. The primary objective of this study was to evaluate the anticancer activity of two doses of avituzumab in terms of PFS. Secondary objectives were to evaluate the efficacy of the two doses of avituzumab with respect to overall survival (OS), time to tumor progression (TTP), tumor response (Response Evaluation Criteria in Solid Tumors [RECIST], version 1.0), and time to treatment failure (TTF). Other objectives include identifying potential markers that may predict response to investigational therapies by examining candidate proteins circulating in the blood and / or expressed in tumors and their relationship to efficacy and safety endpoints. A total of 232 patients were enrolled, 16 in the phase I portion of the study and 216 in the randomized phase II portion. In the phase II portion of the study, 73 patients were randomly assigned to receive 500 mg IV avituzumab plus cetuximab and irinotecan, 71 to receive 1000 mg IV avituzumab plus cetuximab and irinotecan, and 72 to receive cetuximab plus irinotecan alone. The per-protocol (PP) analysis set included 197 patients (66 in the 500 mg avituzumab plus cetuximab and irinotecan group, 65 in the 1000 mg avituzumab plus cetuximab and irinotecan group, and 66 in the cetuximab plus irinotecan group). The incidence of major protocol deviations was low and generally similar across treatment groups.
[0020] Efficacy results in the ITT population The primary efficacy outcome was investigator-assessed PFS.As of the data cutoff date, the estimated hazard ratios (HRs) for the 500 mg avituzumab plus cetuximab and irinotecan group and the 1000 mg avituzumab plus cetuximab and irinotecan group compared with the cetuximab plus irinotecan group, using a Cox proportional hazards model, were 1.13 (95% CI: 0.78, 1.64) and 1.11 (95% CI: 0.77, 1.61), respectively, with no difference between the two groups. Median PFS was similar in the 500 mg abitec plus cetuximab and irinotecan group, the 1000 mg abitec plus cetuximab and irinotecan group, and the cetuximab plus irinotecan group (5.4 months [95% CI: 4.1, 6.0], 5.6 months [95% CI: 4.1, 6.9], and 5.6 months [95% CI: 4.2, 6.9], respectively). The OS analysis results showed that avituzumab may show favorable results. The number and percentage of patients who experienced events (death from any cause) were lower in the avituzumab + cetuximab + irinotecan combination group than in the cetuximab + irinotecan alone group: 39 (53.4%) in the avituzumab 500 mg + cetuximab + irinotecan combination group, 35 (49.3%) in the avituzumab 1000 mg + cetuximab + irinotecan combination group, and 45 (62.5%) in the cetuximab + irinotecan alone group. The hazard ratios (HRs) for 500 mg and 1000 mg avituzumab plus cetuximab and irinotecan versus cetuximab and irinotecan alone were 0.83 (95% CI: 0.54, 1.28) and 0.80 (95% CI: 0.52, 1.25), respectively, favoring avituzumab. Median OS was 15.0 months (95% CI: 10.9, 19.2) for 500 mg avituzumab plus cetuximab and irinotecan, 14.4 months (95% CI: 9.8, 19.3) for 1000 mg avituzumab plus cetuximab and irinotecan, and 11.6 months (95% CI: 9.8, 15.7) for cetuximab and irinotecan alone.
[0021] Exploratory biomarker results The following high-level overview summarizes key biomarker findings: Immunohistochemistry-based expression analysis of targets (αvβ3, αvβ5, αvβ6, αvβ8, pan-αvβ) and target ligands (osteopontin, vitronectin) was performed. High expression of integrin αvβ6 was identified as negative prognostic (predicting shorter survival in the cetuximab + irinotecan alone group) and as predictive of prolonged OS with avituzumab treatment. The αvβ6 biomarker subset consisted of 197 patients, representing 91% of the ITT population from the randomized part of the POSEIDON trial. Furthermore, immunohistochemistry for candidate markers such as integrins αvβ3, αvβ5, αvβ8, pan αvβ, and osteopontin was performed, but none of the additional markers tested showed any correlation with prognosis or prediction. When analyzing the impact of first-line VEGF-containing therapy on OS in patients with high αvβ6 histoscore, there was no difference between the two groups in terms of HR.
[0022] Immunogenicity results The immunogenic properties of avituzumab are favorably positive, as no patients tested positive for neutralizing antibodies to avituzumab.
[0023] Safety Results In this study, all patients except one in the cetuximab plus irinotecan group experienced at least one treatment-emergent AE. The numbers and percentages of patients with TEAEs considered to be related to at least one of the three study drugs were similar across the three groups, with 35 (48.6%) and 39 (56.5%) patients in the 500 mg and 1000 mg groups experiencing TEAEs considered to be related to avituzumab. Grade ≥3 TEAEs were reported slightly more frequently in the avituzumab 500 mg and 1000 mg groups compared with the cetuximab plus irinotecan group (52 [72.2%], 54 [78.3%], and 49 [67.1%] patients, respectively). TEAEs leading to discontinuation of avituzumab were reported in 16 (22.2%) and 12 (17.4%) patients in the avituzumab 500 mg and 1000 mg groups, respectively, with no apparent relationship to dose. The incidence of serious TEAEs was highest in the avituzumab 1000 mg group compared with the other treatment groups, with 26 (36.1%), 34 (49.3%), and 29 (39.7%) patients in the avituzumab 500 mg group, the avituzumab 1000 mg group, and the cetuximab plus irinotecan alone group, respectively. TEAEs with fatal outcomes occurred in 9 (12.5%), 7 (10.1%), and 6 (8.2%) patients, respectively. In conclusion, the increase in dose of avituzumab from 250 mg to 1,000 mg in the POSEIDON trial was well tolerated and no significant safety concerns were identified.
[0024] Biomarker results The POSEIDON trial was planned to prospectively examine the expression of αvβ6 by immunohistochemistry, as high and low levels of αvβ6 expression were thought to be prognostic markers for the survival of these patients, and patients with high αvβ6 expression were thought to benefit from treatment with avituzumab (Figure 3). Further analysis was performed to identify the patient population in which the addition of avituzumab would be most effective. High expression of αvβ6 has been suggested to be a negative prognostic factor for survival when expressed in tumors, so the therapeutic effect of cetuximab + irinotecan alone appears to be limited. Furthermore, since high expression of αvβ6 has been found to be a predictor of response to avituzumab, avituzumab, as an αvβ6 integrin inhibitor, is speculated to prolong PFS and OS in a subset of these patients.
[0025] Efficacy results in the left-sided population with high αvβ6 expression (POSEIDON) A reevaluation of the POSEIDON data revealed that in approximately 73% of patients, the tumor was located on the left side of the colon, evenly distributed between the avituzumab and cetuximab + irinotecan combination group and the cetuximab + irinotecan alone group. Based on the recommendation of left-sided tumors in RAS WT and / or KRAS WT mCRC by international guidelines (NCCN, ESMO2017), a further exploratory analysis was performed using the POSEIDON data to investigate the effect of avituzumab treatment in left-sided patients with high αvβ6 expression compared to right-sided CRC. Surprisingly, a very favorable treatment effect was observed in the left-sided CRC patient population. [Table 2] TIFF0007597450000005.tif88149 TIFF0007597450000006.tif88149 TIFF0007597450000007.tif57147
[0026] left side colon cancer The terms left-sided colorectal cancer and left-sided colon cancer, including the respective localization of the cancer or tumor, are known and understood in the art and are distinct from "right-sided colorectal cancer" or "right-sided colon cancer." According to the present invention, methods of treating "left-sided colorectal cancer" and "left-sided colon cancer" are preferred. More specifically, the proximal and distal portions of the colon are preferably considered to have distinct embryological origins. The portion from the cecum to the proximal two-thirds of the transverse colon is preferably considered to originate from the midgut. The portion from the distal one-third of the transverse colon up to the upper anal canal is preferably considered to originate from the hindgut. When the distal transverse colon is considered to be the border between the right and left colon, the right colon preferably includes the cecum, ascending colon, hepatic flexure, and transverse colon, and the left colon preferably includes the splenic flexure, descending colon, and sigmoid colon. Based on these findings, it has been suggested that colorectal cancer be divided into three distinct diseases: right colon cancer, left colon cancer, and rectal cancer; see, e.g., Michal Mik, Maciej Berut, Lukasz Dziki, Radzislaw Trzcinski, Adam Dziki; Arch Med Sci 2017; 13, 1: 157-162, the disclosures of which are preferably incorporated herein by reference in their entirety. More specifically, in the context of the present invention, "left-sided colorectal cancer" and "left-sided colon cancer" are those parts of the colon that preferably include, and more preferably exclude, the rectum, and are defined by the natural anatomical flexure, the colonic flexure. In the context of the present invention, left-sided colorectal cancer or left-sided colon cancer is defined as cancer located in tissues to the left of the colonic flexure. Thus, in the context of the present invention, cancers located to the right of the colonic flexure, preferably including the transverse portion, are considered as "right-sided colorectal cancer" or "right-sided colon cancer". Methods for actually diagnosing a cancer or tumor and / or localizing it as left-sided are known and understood in the art. Preferably, the left-sidedness is determined anatomically, optically, or sensor-wise, preferably optically, for example, exploratory during surgery or by colonoscopy. However, imaging methods including, but not limited to, CT, MRT, MRI, X-ray, ultrasound, and medical ultrasound are equally suitable for determining whether a human, human patient, or patient has left-sided CRC and / or mCRC. For more information, see also the American Cancer Society's "Colon Cancer Screening Guidelines."
[0027] High expression of αvβ6 integrin Methods for determining high expression of αvβ6 integrin in the context of CRC and / or mCRC are known and understood in the art. Known procedures include measuring the expression of αvβ6 integrin by histological techniques such as immunohistochemistry, preferably using tumor tissue. Suitable methods are known in the art and are described, for example, in Simon L. Goodman, Hans Juergen Grote and Claudia Wilm; Biology Open 1, 329-340 (2012), the disclosure of which is preferably incorporated herein by reference. Expression of integrins αvβ3, αvβ5, αvβ6, αvβ8, and pan-αv, particularly expression of αvβ6 integrin, is preferably assessed using immunohistochemistry of formalin-fixed, paraffin-embedded tumor tissue, as described supra in Goodman SL, Grote HJ, Wilm C. “Matched rabbit monoclonal antibodies against αv-series integrins reveal a novel αvβ3-LIBS epitope, and permit routine staining of archival paraffin samples of human tumors”. Biol Open 2012; 1: 329-340, the disclosures of which are preferably incorporated herein by reference in their entireties. The staining intensity and frequency data were used to calculate a histoscore on a continuous scale of 0 to 300, as described above in Pirker R, Pereira JR, von Pawel J et al. “EGFR expression as a predictor of survival for first-line chemotherapy plus cetuximab in patients with advanced non-small cell lung cancer: analysis of data from the phase 3 FLEX study”. Lancet Oncol 2012; 13: 33-42, the disclosures of which are preferably incorporated herein by reference in their entirety. Preferably, the immunohistochemically stained FFPE samples thus obtained are pathologically evaluated. Typically, a pathologist quantifies the predominant staining intensity, identifies the staining pattern, and estimates the percentage of positively stained tumor tissue. Preferably, an H-score classification, which is a semi-quantitative evaluation of immunohistochemically stained tumor tissue, is applied, preferably following the procedure described by McCarty KS Jr et al., 1985, cited above. Thus, the negative (0), weakly stained (1), moderately stained (2), and strongly stained (3) areas are preferably estimated as a percentage of tumor tissue. Then, the respective histoscores (H-scores) are preferably calculated as follows: H score = (weak)% + (medium)% x 2 + (strong)% x 3 The resulting histoscores are preferably classified as follows:
[0028] [Table 3]
[0029] In the context of the present invention, expression of αvβ6 integrin is classified as high if the section is at least weakly positive, preferably moderately positive, and more particularly strongly positive. Furthermore, expression of αvβ6 integrin equal to or higher than the median value can also be said to be preferably high expression of αvβ6 integrin. More preferably, in the use according to the invention, high αvβ6 integrin expression is characterized by a histoscore, preferably obtained as described herein and / or in the documents cited herein in this respect, or obtained analogously to the methods described and / or cited herein, being higher than 60 (>60), preferably higher than 70 (>70), more preferably higher than 80 (>70), even more preferably higher than 90 (>90), in particular higher than 100 (>100). However, even higher hisscores, such as >110, >120, >130, >140, >150, >160, >170, >180, >190, >200, etc. are likewise preferred. However, the POSEIDON study revealed that a Histoscore of 70 or higher was an appropriate threshold for meeting the criterion of "high αvβ6 integrin expression" for avituzumab treatment.
[0030] RAS wild-type and / or KRAS wild-type status The importance of RAS testing in colorectal cancer and / or metastatic colorectal cancer, and methods for its determination, preferably including but not limited to for determining RAS wild-type and / or KRAS wild-type status, are known and understood in the art and are described, for example, in J Han JM Van Krieken, Etienne Rouleau, Marjolijn JL Ligtenberg, Nicola Normanno,Scott D. Patterson, Andreas Jung, Virchows Arch (2016) 468:383-396. Suitable tests for determining RAS WT, KRAS WT and / or NRAS WT status in CRC and / or mCRC patients are commercially available worldwide, performed in hospitals worldwide, and preferably EMA and / or FDA approved. Suitable tests and testing procedures for determining RAS WT, KRAS WT and / or NRAS WT status are described in the Experimental Section herein. Additionally, N. Normanno, R. Esposito Abate, M. Lambiase, L. Forgione, C. Cardone, A. Iannaccone, A. Sacco, AMRachiglio, E. Martinelli, D. Rizzi, S. Pisconti, M. Biglietto, R. Bordonaro, T. Troiani, TPLatiano, F. Giuliani, S. Leo, A. Rinaldi, E. Maiello, F. Ciardiello; Annals of Oncology 29: 112-118, 2018, J. Vidal et al, Annals of Oncology 28: 1325-1332, 2017, J. Grasselli et al., Annals of Oncology 28: 1294-1301, 2017, the disclosures of which are preferably incorporated herein by reference in their entirety, and RAS Preferred alternative methods for determining WT, KRAS WT and / or NRAS WT status are described.
[0031] In the context of the present invention, RAS preferably comprises KRAS and / or NRAS, preferably both KRAS and NRAS. Particularly preferably, in the case of a treatment method according to the present invention comprising cetuximab, RAS preferably consists of KRAS and NRAS. The respective wild type status has been found to be an important biomarker for at least some growth factors or monoclonal antibodies targeting growth factor receptors, including but not limited to cetuximab and panitumumab. For some time, the efficacy of cetuximab has been mainly associated with the KRAS wild type status, but it is now preferred that it is also associated with the RAS wild type status. In contrast, the efficacy of panitumumab is mainly associated with the NRAS wild type status. However, the efficacy of panitumumab can also be preferably assessed by RAS and / or wild-type testing, see, e.g., Rafael G. Amado, Michael Wolf, Marc Peeters, Eric Van Cutsem, Salvatore Siena, Daniel J. Freeman, Todd Juan, Robert Sikorski, Sid Suggs, Robert Radinsky, Scott D. Patterson, and David D. Chang, Clin Oncol 26:1626-1634 (2008), the disclosure of which is incorporated herein by reference in its entirety. Additionally, major guidelines recommend cetuximab for first-line treatment of left-sided RAS WT mCRC (NCCN Guidelines for Colon Cancer, 2nd Edition, 2017 Update; Arnold D, Cutsem E. V, Cervantes A, et al. Metastatic Colorectal Cancer: ESMO Clinical Practice Guidelines. Annals of Oncology. 2014;25 (suppl 3): iii1-iii9.).
[0032] The determination of the RAS WT status preferably used according to the invention is preferably different from the determination of the KRAS WT status performed, for example, when performing the POSEIDON test (only KRAS exon 2 mutations were excluded, but not mutations in exon 4 and NRAS exons 2-4 (=RAS mutations)). Therefore, in the treatment method according to the invention, the patients to be treated are preferably RAS WT CRC / MCRC patients, and not KRAS WT CRC / MCRC patients. Patients who, as a result of said RAS test, have mutations in both KRAS exons 2-4 and NRAS exons 2-4 (=RAS mutations) are preferably excluded from the preferred patient subgroup to be treated according to the method of the invention. Therefore, testing for RAS wild-type will preferably exclude patients with both RAS and NRAS mutants. Consequently, the RAS wild-type state preferably includes the KRAS wild-type state and the NRAS wild-type state, and more preferably includes the KRAS wild-type state and the NRAS wild-type state. Thus, in the context of the present invention, the RAS WT test preferably comprises a KRAS WT test and / or a NRAS WT test, preferably both a KRAS WT test and a NRAS WT test. Particularly preferably, in the case of a treatment according to the present invention comprising cetuximab, the RAS WT test preferably consists of a KRAS WT test and a NRAS WT test. Thus, preferred objects of the present invention are:
[0033] [1] A method of treating human colon cancer, comprising administering avituzumab to a human in need thereof, wherein the colon cancer has high αvβ6 integrin expression. [2] A method for treating human colon cancer, comprising administering avituzumab to a human in need thereof, wherein the colon cancer is left-sided colon cancer. [3] A method of treating left-sided colon cancer as described herein, preferably as described above and / or below, comprising administering avituzumab to a human being in need thereof, wherein said left-sided colon cancer has high αvβ6 integrin expression. [4] A method as described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular in one or more of sections numbered [1], [2] or [3], wherein a human in need thereof also receives a monoclonal antibody targeting at least one growth factor or growth factor receptor, and / or chemotherapy. [5] A method as described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular in one or more of sections numbered [1], [2], [3], and / or [4], wherein the colorectal cancer is stage II, stage III, or stage IV colorectal cancer. [6] A method as described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular in one or more of sections numbered [1], [2], [3], [4] and / or [5], wherein the colorectal cancer is metastatic colorectal cancer or left-sided metastatic colorectal cancer. [7] A method as described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular in one or more of sections numbered [1], [2], [3], [4], [5] and / or [6], wherein the colorectal cancer is left-sided colorectal cancer or left-sided metastatic colorectal cancer and αvβ6 integrin is highly expressed. [8] A method as described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular in one or more of sections numbered [1] to [7], wherein the colorectal cancer is RAS wild-type and / or KRAS wild-type colorectal cancer. [9] A method as described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular in one or more of sections numbered [1] to [8], wherein the colorectal cancer is RAS wild-type and / or KRAS wild-type left-sided colorectal cancer, or RAS wild-type and / or KRAS wild-type left-sided metastatic colorectal cancer.
[10] A method as described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular in one or more of sections numbered [1] to [9], wherein the colorectal cancer is stage II, stage III, or stage IV RAS wild-type and / or KRAS wild-type left-sided colorectal cancer, or RAS wild-type and / or KRAS wild-type left-sided metastatic colorectal cancer, and αvβ6 integrin is highly expressed.
[0034]
[11] A method as described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular in one or more of sections numbered [1] to
[10] , wherein the colorectal cancer is RAS wild-type and / or KRAS wild-type left-sided metastatic colorectal cancer and has high expression of αvβ6 integrin.
[12] A method as described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular in one or more of sections numbered [1] to
[11] , wherein the left-sided colorectal cancer is newly diagnosed colorectal cancer.
[13] A method as described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular in one or more of sections numbered [1] to
[12] , wherein the method is applied in first line treatment.
[14] A method as described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular in one or more of sections numbered [4] to
[13] , wherein the method is applied in a combination therapy setting.
[15] A method as described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular in one or more of sections numbered [4] to
[14] , wherein the method is applied in an adjuvant therapy setting.
[16] A method as described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular in one or more of sections numbered [4] to
[15] , wherein the method is applied in the context of neoadjuvant therapy.
[17] A method as described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular in one or more of sections numbered [4] to
[15] , characterized in that the human receives, concomitantly with the avituzumab, a monoclonal antibody targeting the at least one growth factor or growth factor receptor and / or any of the chemotherapy.
[18] A method as described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular in one or more of sections numbered [4] to
[16] , wherein the monoclonal antibody targeting at least one growth factor or growth factor receptor comprises cetuximab, bevacizumab and / or panitumumab.
[19] A method as described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular as described in one or more of sections numbered [4] to
[18] , wherein the monoclonal antibody targeting at least one growth factor or growth factor receptor is selected from the group consisting of cetuximab and bevacizumab.
[20] A method as described herein, preferably as described above and / or below, more preferably as described in the above and / or below numbered sections, in particular as described in one or more of sections numbered [5] to
[18] , wherein the chemotherapy comprises one or more compounds selected from the group consisting of irinotecan, fluorouracil (5-FU), or a prodrug thereof, preferably capecitabine and / or 5-fluorocytosine, tegafur / uracil (UFT), folinic acid (leucovorin), oxaliplatin (eloxatin), aflibercept, regorafenib, capecitabine, and prodrugs thereof, and salts and solvates thereof.
[0035]
[21] The method described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular in one or more of sections numbered [4] to
[20] , wherein chemotherapy is administered according to the FOLFIRI protocol.
[22] A method as described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular in one or more of sections numbered [4] to
[20] , wherein chemotherapy is administered according to a FOLFOX protocol.
[23] The methods described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular in one or more of the sections numbered [4] to
[22] , wherein chemotherapy is a) one or more compounds selected from irinotecan, fluorouracil (5-FU), and folinic acid (leucovorin), and prodrugs thereof; or b) one or more compounds selected from oxaliplatin (e.g., Eloxatin), fluorouracil (5-FU), and folinic acid (e.g., leucovorin), and prodrugs thereof; and salts and solvents thereof.
[24] A method as described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular in one or more of sections numbered [1] to
[23] , wherein avituzumab is administered to a human in an amount of 375 milligrams to 750 milligrams per week, in an amount of 750 milligrams to 1500 milligrams every two weeks, or in an amount of 1500 milligrams to 3000 milligrams per month.
[25] A method as described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular in one or more of sections numbered [1] to
[24] , characterized in that avituzumab is administered to a human in an amount of about 500 milligrams per week, in an amount of about 1000 milligrams every two weeks, or in an amount of about 2000 milligrams per month.
[26] A method as described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular in one or more of sections numbered [1] to
[25] , wherein avituzumab is administered to a human for at least 6 cycles, preferably at least 8 cycles, more preferably at least 10 cycles, in particular at least 12 cycles, each cycle having a duration of about 1 week, about 2 weeks, about 4 weeks, or about 1 month.
[27] A method as described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular in one or more of sections numbered [1] to
[26] , wherein avituzumab is administered to a human for at least 6 cycles, preferably at least 8 cycles, more preferably at least 10 cycles, in particular at least 12 cycles, each cycle having a duration of about 2 weeks.
[28] A method as described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular as described in one or more of sections numbered [4] to
[27] , wherein a monoclonal antibody targeting at least one growth factor or growth factor receptor is administered to a human in an amount of 75 milligrams to 1000 milligrams per week, 150 milligrams to 2000 milligrams every two weeks, or 300 milligrams to 4000 milligrams per month.
[29] The methods described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular in one or more sections numbered
[18] to
[28] , wherein cetuximab is administered to a human in an amount of about 150 mg / m2 to 550 mg / m2 per week, about 300 mg / m2 to 1100 mg / m2 every two weeks, or about 600 mg / m2 to 2200 mg / m2 per month.
[30] A method as described herein, preferably as described above and / or below, more preferably as described in the above and / or below numbered sections, in particular one or more of sections numbered
[18] to
[29] , wherein cetuximab is administered to a human for at least 6 cycles, preferably at least 8 cycles, more preferably at least 10 cycles, in particular at least 12 cycles, each cycle having a duration of about 1 week, about 2 weeks, about 4 weeks, or about 1 month.
[0036]
[31] A method as described herein, preferably as described above and / or below, more preferably as described in the above and / or below numbered sections, in particular one or more of sections numbered
[18] to
[30] , wherein cetuximab is administered to the human being for at least 6 cycles, preferably at least 8 cycles, more preferably at least 10 cycles, in particular at least 12 cycles, each cycle having a duration of about 2 weeks, and wherein the cetuximab is administered to the human being weekly or every other week.
[32] The method according to any one or more of the methods described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular as described in one or more of the sections numbered
[18] to
[31] , wherein cetuximab is administered to a human for at least 6 cycles, preferably at least 8 cycles, more preferably at least 10 cycles, particularly preferably at least 12 cycles, each cycle having a duration of about 2 weeks, and wherein cetuximab a) in an amount of about 500 milligrams per square meter during each cycle, preferably at the beginning of each cycle; or b) Approximately 400 milligrams per square meter at the beginning of week 1 of each cycle and approximately 250 milligrams per square meter at the beginning of week 2 of each cycle. The method according to any one of the preceding claims,
[33] The method according to any of the preceding claims, preferably as described above and / or below, more preferably as described in any of the numbered sections above and / or below, in particular in one or more of sections numbered
[18] to
[28] , wherein bevacizumab is administered to a human in an amount of about 1 milligram / kilogram to 10 milligram / kilogram per week, 3 milligram / kilogram to 15 milligram / kilogram every other week, or about 6 milligram / kilogram to 30 milligram / kilogram per month.
[34] A method as described herein, preferably as described above and / or below, more preferably as described in the above and / or below numbered sections, in particular as described in one or more of sections numbered
[18] to
[28] and
[33] , wherein bevacizumab is administered to a human for at least 6 cycles, preferably at least 8 cycles, more preferably at least 10 cycles, in particular at least 12 cycles, each cycle having a duration of about 1 week, about 2 weeks, about 4 weeks, or about 1 month.
[35] A method as described herein, preferably as described above and / or below, more preferably as described in the above and / or below numbered sections, in particular as described in one or more of sections numbered
[18] to
[28] and
[33] to
[34] , wherein bevacizumab is administered to the human being for at least 6 cycles, preferably at least 8 cycles, more preferably at least 10 cycles, in particular at least 12 cycles, each cycle having a duration of about 2 weeks, and wherein the bevacizumab is administered to the human being weekly or every other week.
[36] A method as described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular in one or more of sections numbered
[18] to
[28] and
[33] to
[35] , wherein bevacizumab is administered to a human for at least 6 cycles, preferably at least 8 cycles, more preferably at least 10 cycles, particularly preferably at least 12 cycles, each cycle having a duration of about 2 weeks, and wherein the bevacizumab a) during each cycle, preferably at the beginning of each cycle, in an amount of 3 milligrams / kilograms to 15 milligrams / kilograms, or in an amount of 5 milligrams / kilograms to 10 milligrams / kilograms; or b) in an amount of about 7.5 milligrams per kilogram during each cycle, preferably at the beginning of each cycle The method according to any one of the preceding claims,
[37] The method described herein, preferably as described above and / or below, more preferably as described in one or more of the numbered sections above and / or below, in particular numbered
[18] to
[28] , wherein panitumumab is administered to a human in an amount of about 1 milligram / kilogram to 10 milligram / kilogram per week, 3 milligram / kilogram to 15 milligram / kilogram every two weeks, or about 6 milligram / kilogram to 30 milligram / kilogram per month.
[38] A method as described herein, preferably as described above and / or below, more preferably as described in the above and / or below numbered sections, in particular as described in one or more of sections numbered
[18] to
[28] and
[37] , wherein panitumumab is administered to a human being for at least 6 cycles, preferably at least 8 cycles, more preferably at least 10 cycles, particularly preferably at least 12 cycles, each cycle having a duration of about 1 week, about 2 weeks, about 4 weeks, or about 1 month.
[39] A method according to any one of the preceding claims, preferably as described above and / or below, more preferably as described in any one of the preceding and / or below numbered sections, in particular as described in two or more of sections numbered
[18] to
[28] and
[37] to
[38] , wherein panitumumab is administered to the human being for at least 6 cycles, preferably at least 8 cycles, more preferably at least 10 cycles, in particular at least 12 cycles, each cycle having a duration of about 2 weeks, and wherein the panitumumab is administered to the human being every week or every other week.
[40] A method as described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular in two or more of sections numbered
[18] to
[28] and
[37] to
[39] , wherein panitumumab is administered to a human for at least 6 cycles, preferably at least 8 cycles, more preferably at least 10 cycles, in particular at least 12 cycles, each cycle having a duration of about 2 weeks, and wherein the panitumumab is a) during each cycle, preferably at the beginning of each cycle, in an amount of 3 milligrams / kilograms to 15 milligrams / kilograms, or in an amount of 4 milligrams / kilograms to 10 milligrams / kilograms; or b) in an amount of about 6 milligrams per kilogram during each cycle, preferably at the beginning of each cycle. The method according to any one of the preceding claims, wherein the compound is administered by any one of the following methods.
[0037]
[41] A method according to one or more of the sections described herein, preferably described above and / or below, more preferably described in the above and / or below numbered sections, in particular sections numbered
[29] to
[32] and / or sections numbered
[37] to
[40] , wherein the colorectal cancer is RAS wild-type and / or KRAS wild-type colorectal cancer.
[42] A method as described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular in one or more of sections
[29] to
[32] and / or
[37] to
[40] , characterized in that the colorectal cancer is RAS wild-type and / or KRAS wild-type left-sided colorectal cancer, or RAS wild-type and / or KRAS wild-type left-sided metastatic colorectal cancer.
[43] A method as described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular in one or more of sections numbered [4] to
[42] , wherein the chemotherapy is administered to a human for at least 6 cycles, preferably at least 8 cycles, more preferably at least 10 cycles, in particular at least 12 cycles, each cycle having a duration of about 2 weeks; a) the irinotecan, and / or its prodrugs, salts and / or solvates, b) folinic acid, and / or its prodrugs, salts and / or solvates; and / or c) the fluorouracil (5-FU), and / or its prodrugs, salts and / or solvates, The method, wherein the human is administered a dose during each cycle, preferably at the start of each cycle and / or at the start of each week of each cycle.
[44] A method as described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular in one or more of sections numbered [4] to
[43] , wherein the human is also receiving chemotherapy, the chemotherapy comprising: a) irinotecan and / or its prodrugs, salts and / or solvates in an amount of 50 milligrams / meter to 150 milligrams / meter per week, 100 milligrams / meter to 300 milligrams / meter every other week, or 200 milligrams / meter to 600 milligrams / meter per month; b) folinic acid (racemic), and / or its prodrugs, salts and / or solvates, in an amount of 150 milligrams / meter to 250 milligrams / meter per week, 300 milligrams / meter to 500 milligrams / meter every two weeks, or 600 milligrams / meter to 1000 milligrams / meter per month; and / or c) Fluorouracil (5-FU) and / or its prodrugs, salts and / or solvates in an amount of 150 milligrams / m² to 250 milligrams / m² per week, 300 milligrams / m² to 500 milligrams / m² every other week, or 600 milligrams / m² to 1000 milligrams / m² per month. The method comprising:
[45] A method as described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular in one or more of sections numbered [4] to
[44] , wherein the human is also receiving chemotherapy, the chemotherapy comprising: a) irinotecan and its prodrugs, salts and / or solvates in an amount of 50 milligrams / m² to 150 milligrams / m² per week, 100 milligrams / m² to 300 milligrams / m² every other week, or 200 milligrams / m² to 600 milligrams / m² per month; b) folinic acid (racemic), and its prodrugs, salts and / or solvates, in an amount of 150 milligrams / meter to 250 milligrams / meter per week, 300 milligrams / meter to 500 milligrams / meter every other week, or 600 milligrams / meter to 1000 milligrams / meter per month; and / or c) Fluorouracil (5-FU), as well as its prodrugs, salts and / or solvates, in an amount of 1000 milligrams / m² to 3000 milligrams / m² per week, 2000 milligrams / m² to 6000 milligrams / m² every two weeks, or 4000 milligrams / m² to 12000 milligrams / m² per month, preferably in an amount of 2000 milligrams / m² to 3200 milligrams / m² every two weeks. The method comprising:
[46] A method as described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular as described in one or more of sections numbered [4] to
[45] , wherein the chemotherapy is administered to a human for at least 6 cycles, preferably at least 8 cycles, more preferably at least 10 cycles, in particular at least 12 cycles, each cycle having a duration of about 1 week, about 2 weeks, about 4 weeks, or about 1 month.
[47] A method as described herein, preferably as described above and / or below, more preferably as described in the above and / or below numbered sections, in particular in one or more of sections numbered [4] to
[42] , wherein the chemotherapy is administered to a human for at least 6 cycles, preferably at least 8 cycles, more preferably at least 10 cycles, in particular at least 12 cycles, each cycle having a duration of about 2 weeks; a) the oxaliplatin and / or its prodrugs, salts and / or solvates, b) folinic acid, and / or its prodrugs, salts and / or solvates; and / or c) the fluorouracil (5-FU), and / or its prodrugs, salts and / or solvates, The method is administered to a human during each cycle, preferably at the start of each cycle.
[48] A method as described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular in one or more of sections numbered [4] to
[42] and
[47] , wherein the human is also receiving chemotherapy, the chemotherapy comprising: a) oxaliplatin and / or its prodrugs, salts and / or solvates in an amount of 20 milligrams / m² to 120 milligrams / m² per week, 40 milligrams / m² to 240 milligrams / m² every two weeks, or 80 milligrams / m² to 480 milligrams / m² per month; b) folinic acid (racemic), and / or its prodrugs, salts and / or solvates, in an amount of 150 milligrams / meter to 250 milligrams / meter per week, 300 milligrams / meter to 500 milligrams / meter every two weeks, or 600 milligrams / meter to 1000 milligrams / meter per month; and / or c) 5-FU and / or its prodrugs, salts and / or solvates in an amount of 150 milligrams / m² to 250 milligrams / m² per week, 300 milligrams / m² to 500 milligrams / m² every other week, or 600 milligrams / m² to 1000 milligrams / m² per month. The method comprising:
[49] A method as described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular in one or more of sections numbered [4] to
[42] and
[47] to
[48] , wherein the human is also receiving chemotherapy, the chemotherapy comprising: a) oxaliplatin and / or its prodrugs, salts and / or solvates in an amount of 20 milligrams / m² to 120 milligrams / m² per week, 40 milligrams / m² to 240 milligrams / m² every two weeks, or 80 milligrams / m² to 480 milligrams / m² per month; b) folinic acid (racemic), and / or its prodrugs, salts and / or solvates, in an amount of 150 milligrams / meter to 250 milligrams / meter per week, 300 milligrams / meter to 500 milligrams / meter every two weeks, or 600 milligrams / meter to 1000 milligrams / meter per month; and / or c) 5-FU and / or its prodrugs, salts and / or solvates in an amount of 1000 milligrams / m² to 3000 milligrams / m² per week, 2000 milligrams / m² to 6000 milligrams / m² every two weeks, or 4000 milligrams / m² to 12000 milligrams / m² per month, preferably in an amount of 2000 milligrams / m² to 3200 milligrams / m² every two weeks. The method comprising:
[50] A method as described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular one or more of sections numbered [4] to
[42] and
[47] to
[49] , wherein the chemotherapy is administered to a human for at least 6 cycles, preferably at least 8 cycles, more preferably at least 10 cycles, in particular at least 12 cycles, each cycle having a duration of about 1 week, about 2 weeks, about 4 weeks, or about 1 month.
[0038]
[51] A method as described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular in one or more of sections numbered [4] to
[42] and
[47] to
[50] , wherein the chemotherapy is administered to a human for at least 6 cycles, preferably at least 8 cycles, more preferably at least 10 cycles, in particular at least 12 cycles, each cycle having a duration of about 2 weeks, a) oxaliplatin, and / or its prodrugs, salts and / or solvates, b) folinic acid, and / or its prodrugs, salts and / or solvates, and / or c) 5-FU and / or its prodrugs, salts and / or solvates, The method is administered to a human during each cycle, preferably at the start of each cycle.
[52] A method as described herein, preferably as described above and / or below, more preferably as described in the above and / or below numbered sections, in particular in one or more of sections numbered [1] to
[51] , wherein the primary tumor is located in the colon.
[53] A method as described herein, preferably as described above and / or below, more preferably as described in the numbered sections above and / or below, in particular in one or more of sections numbered [1] to
[52] , characterized in that the primary tumor is located on the left side of the colon.
[54] A method for treating RAS wild-type and / or KRAS wild-type left-sided metastatic colorectal cancer (mCRC) in patients with high expression of αvβ6 integrin, comprising administering to the patient avituzumab in combination with cetuximab and / or FOLFIRI.
[55] A method for treating RAS wild-type left-sided metastatic colorectal cancer (mCRC) in a patient with high expression of αvβ6 integrin, comprising administering to the patient avituzumab in combination with cetuximab and FOLFIRI.
[56] A method for treating RAS wild-type and / or KRAS wild-type left-sided metastatic colon cancer in patients with high expression of αvβ6 integrin, comprising administering to the patient avituzumab in combination with cetuximab and / or FOLFIRI.
[57] A method for treating RAS wild-type and / or KRAS wild-type left-sided metastatic colon cancer or metastatic colorectal cancer in a patient with high expression of αvβ6 integrin, comprising administering to the patient avituzumab in combination with cetuximab and / or irinotecan.
[58] A method for treating RAS wild-type left-sided metastatic colon cancer or metastatic colorectal cancer in a patient with high expression of αvβ6 integrin, comprising administering to the patient avituzumab in combination with cetuximab and irinotecan, preferably in combination with folinic acid and / or 5-FU.
[59] The method described in one or more of sections
[54] to
[58] , wherein the treatment is a first-line treatment.
[60] A method according to one or more of sections
[54] to
[59] , wherein the metastatic colon cancer and / or metastatic colorectal cancer to be treated is stage III and / or stage IV cancer.
[0039]
[61] The method according to one or more of Sections
[54] to
[60] , wherein the pharmaceutical agent is administered to the patient such that the amount of avituzumab administered is about 1,000 milligrams every two weeks or about 2,000 milligrams per month.
[62] The method according to one or more of sections
[54] to
[61] , wherein the patient with high αvβ6 integrin expression has an αvβ6 integrin histoscore of higher than 70, preferably higher than 80, more preferably higher than 90, and particularly higher than 100, higher than 120, or higher than 150.
[63] A method according to one or more of sections
[54] to
[62] , wherein the treatment is administered for at least 6 cycles, at least 8 cycles, at least 10 cycles, or at least 12 cycles, each cycle consisting of 2 weeks or about 2 weeks.
[64] The method described in one or more of sections
[54] to
[63] , wherein the avituzumab, the cetuximab, and / or the FOLFIRI are administered to the patient every other week, preferably in a cycle of 2 weeks or about 2 weeks.
[65] A method described in one or more of Sections
[54] to
[64] , wherein the method is further defined as described in one or more of Sections [1] to
[53] .
[65] A method according to one or more of Sections [1] to
[64] , wherein the human(s) or patient(s) treated with avituzumab have high αvβ6 integrin expression, as quantified by an αvβ6 integrin histoscore preferably higher than 70, preferably higher than 80, more preferably higher than 90, and particularly higher than 100, higher than 120, or higher than 150, wherein the histoscore is determined by immunohistochemistry performed according to Simon L. Goodman, Biology Open 1, 329-340 (2012), and Histoscore classification performed according to McCarty Jr KS, Arch Pathol Lab Med 109: 716-721 (1985).
[0040] Thus, a preferred subject of the present invention is the use of avituzumab in the treatment of colorectal cancer, preferably in patients with left-sided CRC and / or mCRC with high αvβ6 expression, preferably in patients undergoing first-line treatment. Particularly preferred is the use of avituzumab in the treatment of colorectal cancer in patients with RAS wild-type (WT) and / or KRAS wild-type CRC and / or mCRC, in combination with a monoclonal antibody targeting at least one growth factor or growth factor receptor, preferably a monoclonal antibody selected from the group consisting of cetuximab and panitumumab.
[0041] Also particularly preferred is the use of avituzumab, preferably as described above and / or below, in combination with a recommended standard of care (SOC) for colorectal cancer, in particular a recommended standard of care (SOC) treatment regimen, preferably a recommended standard of care (SOC) treatment regimen, i) SOC treatment regimens for the treatment of RAS WT CRC and / or mCRC; ii) SOC treatment regimens for the treatment of KRAS WT CRC and / or mCRC; iii) SOC treatment regimens for the treatment of left-sided RAS WT CRC and / or mCRC; iv) SOC treatment regimens for the treatment of left-sided KRAS WT CRC and / or mCRC; v) SOC treatment regimens for first-line treatment of left-sided RAS WT CRC and / or mCRC; vi) SOC treatment regimens for first-line treatment of left-sided KRAS WT CRC and / or mCRC; SOC treatment regimens selected from the group consisting of: preferably comprising cetuximab or panitumumab, more preferably cetuximab, optionally in combination with FOLFIRI or FOLFOX, preferably in combination with FOLFIRI. These treatments are well established, especially in first-line RAS WT and / or KRAS WT CRC and / or mCRC, preferably in first-line RAS WT and / or KRAS WT mCRC, and according to the latest analyses, especially preferred in left-sided CRC and / or mCRC, even more preferably in left-sided CRC and / or mCRC. Furthermore, major guidelines recommend this treatment in first-line left-sided RAS WT and / or KRAS WT mCRC (References: NCCN Guidelines 11, ESMO Guidelines 12).
[0042] The above and / or below described uses of Avituzumab as well as the treatment methods according to the invention are particularly preferred with respect to a human, human beings or human patients with a confirmed RAS WT status. This patient group preferably differs from humans or human patients with a confirmed KRAS WT status, for example humans or human patients treated in the POSEIDON study, in that only KRAS exon 2, but not exon 4, and NRAS exon 2-4 mutations (=RAS mutations) have been excluded. RAS WT CRC patients are therefore more preferably treated according to the invention than KRAS WT CRC patients. Patients with KRAS exons 2-4 and NRAS exons 2-4 mutations (=RAS mutations) are therefore not part of the most preferred population of humans or human patients to be treated according to the invention. Furthermore, humans or human patients exhibiting BRAF gene mutations in CRC can be considered as a subset of CRC patients with poor prognosis, preferably requiring a different treatment method. However, BRAF mutations are believed to occur in right-sided CRC. Thus, a synergistic effect of the methods according to the invention is considered to be preferably established, particularly with respect to methods according to the invention comprising avituzumab + cetuximab + irinotecan, particularly in a human, multiple humans or human patient with high expression of αvβ6 integrin.
[0043] Therefore, particularly preferred according to the present invention is a method for treating CRC and / or mCRC, preferably mCRC, preferably as described herein, in which the choice of backbone treatment is an irinotecan-based chemotherapy, preferably FOLFIRI, especially for first-line treatment. Furthermore, cetuximab+FOLFIRI is recommended as SOC in the international guidelines for CRC and / or mCRC, especially for the treatment of left-sided RAS WT mCRC. Preferably, the choice of backbone treatment is made based on tumor biology, especially in these first-line patients. Particularly preferred according to the present invention is a method for treating CRC and / or mCRC, preferably mCRC, as described herein, comprising the addition of 5-FU to the treatment regimen. Particularly preferred in the context of the present invention is therefore a treatment regimen comprising the addition of avituzumab to cetuximab and FOLFIRI (preferably with 5-FU). Also preferred is a backbone therapy comprising cetuximab and / or FOLFOX, or a backbone therapy comprising bevacizumab, optionally in combination with FOLFIRI or FOLFOX.
[0044] In the methods of treatment or uses in treatment described herein, avituzumab is preferably administered to the human(s), human patient, or patient in an amount of at least 250 milligrams per week, at least 500 milligrams every other week, or at least 1000 milligrams per month. Avituzumab is preferably administered to the human(s), human patient, or patient in an amount of up to 1000 milligrams per week, up to 2000 milligrams every other week, or up to 4000 milligrams per month. Preferably, avituzumab is administered in a so-called "flat dosing" manner, meaning that all humans, human patients, or simply patients receive a defined amount or dose of avituzumab, regardless of body weight or body surface area, etc. If not otherwise clearly defined, administration of abituzumab preferably means administration of abituzumab to a human / humans, human patient or simply a patient, and the amounts given therein are preferably amounts per human, per human patient or simply a patient. The same preferably applies to all active ingredients, active principles or medicinal products in the context of the methods of treatment, medical uses and / or treatment regimens according to the invention described herein. More preferably, avituzumab is administered in an amount of 375 milligrams to 750 milligrams per week, in an amount of 750 milligrams to 1500 milligrams every two weeks, or in an amount of 1500 milligrams to 3000 milligrams per month. More preferably, avituzumab is administered in an amount of 450 milligrams to 550 milligrams per week, in an amount of 900 milligrams to 1100 milligrams every other week, or in an amount of 1800 milligrams to 2200 milligrams per month.
[0045] Typically, tumor treatment is repeated at defined time intervals, which are preferably called "cycles". The term "cycle" is known and understood in the art. In general, a cycle is an interval of one or more weeks, preferably one, two, three or four weeks, after which essentially the same treatment is repeated for a particular human, human patient or simply a patient. According to the present invention, a cycle preferably has a duration of two weeks or about two weeks, particularly for the administration of avituzumab. More preferably, avituzumab is administered in an amount of 900 milligrams to 1100 milligrams per cycle, each cycle preferably consisting of 2 weeks or about 2 weeks. Preferably, said avituzumab is administered at the beginning of each cycle, preferably on day 1 or 2 of each cycle, more preferably on day 1 of each cycle. Particularly preferably, avituzumab is administered in an amount of about 1000 milligrams per cycle, each cycle preferably consisting of 2 weeks or about 2 weeks. Preferably, said avituzumab is administered at the beginning of each cycle, preferably on day 1 or 2 of each cycle, more preferably on day 1 of each cycle. Particularly preferably, avituzumab is administered to the patient in an amount of about 1000 milligrams per cycle (flat dose), each cycle preferably consisting of 2 weeks or about 2 weeks. Preferably, said avituzumab is administered at the beginning of each cycle, preferably on day 1 or 2 of each cycle, more preferably on day 1 of each cycle.
[0046] Preferably, avituzumab is administered in combination with at least one monoclonal antibody targeting growth factor or growth factor receptor, and / or chemotherapy. Monoclonal antibodies targeting growth factor or growth factor receptor are known in the art. Preferred growth factor or growth factor receptor targeting monoclonal antibodies consist of cetuximab, bevacizumab, and / or panitumumab, preferably said growth factor or growth factor receptor targeting monoclonal antibodies are selected from the group of cetuximab, bevacizumab, and / or panitumumab, among which cetuximab is particularly preferred. Cetuximab itself and suitable methods for administering cetuximab are known in the art. Preferably, cetuximab is administered in an amount of about 150 mg / m2 to 550 mg / m2 weekly, 300 mg / m2 to 1100 mg / m2 biweekly, and 600 mg / m2 to 2200 mg / m2 monthly. More preferably, cetuximab is administered in an amount of about 200 milligrams / m2 to 350 milligrams / m2 per week, 400 milligrams / m2 to 700 milligrams / m2 per two weeks, and 800 milligrams / m2 to 1,400 milligrams / m2 per month. More preferably, cetuximab is administered in an amount of 450 milligrams to 750 milligrams per cycle, each cycle preferably consisting of 2 weeks or about 2 weeks. Preferably, said cetuximab is administered at the beginning of each 2 week cycle, preferably on day 1 or 2 of each cycle, more preferably on day 1 of each cycle (consisting of 2 weeks or about 2 weeks), or alternatively, the amount of cetuximab administered is split into two, with one part being administered at the beginning of week 1 of each cycle and the second part being administered at the beginning of week 2 of each cycle. Preferably, it is split in a ratio of about 1:1, or between 2:1 and 4:1, and particularly preferably in a ratio of about 3:2. Particularly preferably, the cetuximab is administered in an amount of about 500 milligrams per square meter per cycle (consisting of two weeks or about two weeks), preferably on the first or second day of each cycle, more preferably on the first day of each cycle, or in an amount of about 650 milligrams per square meter per cycle, with the first about 400 milligrams per square meter being administered at the beginning of the first week of each cycle and the remaining about 250 milligrams per square meter being administered at the beginning of the second (and final) week of each cycle.
[0047] Preferably, the avituzumab is administered in combination with FOLFIRI. More preferably, the avituzumab is administered in combination with the cetuximab and FOLFIRI. FOLFIRI comprises folinic acid (leucovorin), fluorouracil (5-FU), and irinotecan, and / or prodrugs, salts, and / or solvates thereof, and more preferably consists of folinic acid (leucovorin), fluorouracil (5-FU), and irinotecan, and / or prodrugs, salts, and / or solvates thereof. FOLFIRI itself and its method of administration are known and understood in the art. Preferably, FOLFIRI is administered according to a FOLFIRI protocol. More preferably, FOLFIRI is administered as follows:
[0048] Folinic acid (preferably racemic folinic acid) and / or its prodrugs, salts, and / or solvates are known in the art as such and suitable dosage regimens therefor. Preferably, it is administered in an amount of 150 milligrams / m² to 250 milligrams / m² per week, in an amount of 300 milligrams / m² to 500 milligrams / m² every other week, or in an amount of 600 milligrams / m² to 1000 milligrams / m² per month. More preferably, it is administered in an amount of 300 milligrams / m² to 500 milligrams / m² per cycle, each cycle preferably consisting of 2 weeks or about 2 weeks. Even more preferably, it is administered in an amount of about 400 milligrams / m² per cycle, each cycle preferably consisting of 2 weeks or about 2 weeks. Preferably, it is administered at the beginning of each cycle, preferably on the first or second day of each cycle, more preferably on the first day of each cycle, said cycle consisting of 2 weeks or about 2 weeks. Fluorouracil (5-FU), and / or its prodrugs, salts, and solvates, as such, and suitable dosage regimens therefor, are known in the art. Preferably, it is administered in an amount of 1000 milligrams / m² to 3000 milligrams / m² per week, 2000 milligrams / m² to 6000 milligrams / m² every two weeks, or 4000 milligrams / m² to 12000 milligrams / m² per month, more preferably 2000 milligrams / m² to 3200 milligrams / m² every two weeks. More preferably, it is administered in an amount of 1200 mg / m2 to 1500 mg / m2 per week, 2400 mg / m2 to 3000 mg / m2 every other week, or 4800 mg / m2 to 6000 mg / m2 per month, more preferably in an amount of 2000 mg / m2 or 3000 mg / m2 every other week. More preferably, it is administered in an amount of 2000 mg / m2 or 2800 mg / m2 per cycle, each cycle preferably consisting of 2 weeks or about 2 weeks. It is preferably administered at the beginning of each 2-week cycle, preferably on the first and / or second day of each cycle. More preferably, about 400 milligrams per square meter is administered as an intravenous bolus on day 1, followed by one or more additional intravenous doses on days 1 and / or 2 totaling about 2400 milligrams per square meter, or a continuous dose of 2400 milligrams per square meter on days 1 and 2. Irinotecan, and / or prodrugs, salts, and solvates, as well as suitable dosage regimens for administration thereof, are known in the art. Preferably, it is administered in an amount of 50 milligrams / m² to 150 milligrams / m² per week, 100 milligrams / m² to 300 milligrams / m² every other week, or 200 milligrams / m² to 600 milligrams / m² per month, more preferably in an amount of 80 milligrams / m² to 100 milligrams / m² per week, 160 milligrams / m² to 200 milligrams / m² every other week, or 320 milligrams / m² to 400 milligrams / m² per month. More preferably, it is administered in an amount of 160 milligrams / m² to 200 milligrams / m² per cycle, each cycle preferably consisting of 2 weeks or about 2 weeks. Preferably it is administered at the beginning of each cycle, preferably on day 1 or 2 of each cycle, more preferably on day 1 of each cycle, said cycle consisting of 2 weeks or about 2 weeks.
[0049] The 1000 milligram dose of avituzumab, preferably at two week dosing intervals and also preferably referred to as a two week or about two week cycle, is most preferred due to the newly confirmed efficacy without significant increase in toxicity in the largest number of patients studied, and the 1000 milligram dose at steady state consistently results in avituzumab serum trough concentrations above the IC99 of the nonlinear clearance pathway at two week dosing intervals. Preferably, said 1000 milligram dose of avituzumab, preferably administered intravenously, is administered in combination with cetuximab+FOLFIRI, also preferably administered intravenously, to patients with RAS WT, left-sided, mCRC with high expression of αvβ6 integrin, more preferably to newly diagnosed patients with RAS WT, left-sided, mCRC with high expression of αvβ6 integrin, especially those patients who are candidates for first line treatment.
[0050] It is strongly recommended that patients have RAS WT or KRAS WT mCRC confirmed by a local laboratory before administering cetuximab. High expression of αvβ6 integrin by a central laboratory is particularly preferred, preferably at the time of screening. Preferably, patients with confirmed high expression of αvβ6 integrin and RAS WT or KRAS WT status are treated with cetuximab + FOLFIRI in addition to avituzumab 1000 milligrams (every 2 weeks = 1 cycle) based on standard of care protocols in this regard. Preferably, the treatment continues for at least 6 cycles, more preferably at least 8 cycles, especially at least 10 cycles. Typically, 6 or more cycles are administered. Typically, up to about 20 cycles are administered, preferably about 18, about 16, about 14, or about 12 cycles. However, the number of cycles administered to each patient is determined independently by the attending oncologist. Preferably, abituzumab treatment according to the invention added to SoC, more preferably added to cetuximab + FOLFIRI, is superior to SoC, more preferably to cetuximab + FOLFIRI alone, in terms of progression-free survival (PFS), preferably in terms of investigator-based progression-free survival (PFS).
[0051] Preferably, the treatment method according to the present invention is superior to prior art treatment regimens with respect to one or more criteria selected from the group consisting of the following criteria: investigator-performed overall survival (OS), objective response rate (ORR), depth of response (DPR), and early tumor shrinkage (ETS). More preferably, the treatment methods according to the present invention are comparable in terms of safety and tolerability to prior art treatment regimens, and preferably also in light of greater efficacy. Thus, a method treatment according to the present invention preferably exhibits favorable results in one or more of the following given characteristics: High overall survival (OS), High objective response rate (ORR), High depth of response (DPR), and Early tumor shrinkage (ETS). Potential for higher rates of secondary resections with curative intent. A favourable overall safety profile, including at least adequate outcomes in one or more of the following: frequency, severity and severity of AEs (including AEs with serious consequences), frequency and nature of AEs leading to discontinuation, frequency and nature of clinically significant laboratory and vital sign abnormalities, frequency of anti-drug antibodies (binding and / or neutralising).
[0052] In order to benefit from the treatment according to the invention, in particular the preferred treatment according to the invention, a human being, human patient or patient must preferably fulfil one or more, preferably two or more, in particular three or more of the following criteria: evidence of metastatic colorectal cancer, preferably stage IV metastatic colorectal cancer, more preferably newly diagnosed metastatic colorectal cancer or newly diagnosed stage IV metastatic colorectal cancer; Primary tumor in the left side of the colon (including the left splenic flexure) or rectum, or preferably in the left side of the colon (including the left splenic flexure) but excluding the rectum; - local assessment has revealed wild-type RAS gene mutation status in the tumor (primary or metastatic); or, preferably, local assessment has revealed wild-type KRAS gene mutation status in the tumor (primary or metastatic); Tumor tissue specimens demonstrating high αvβ6 integrin expression as assessed by a central laboratory; or, preferably, tumor tissue specimens (formalin-fixed, paraffin-embedded blocks), preferably from primary resection and / or surgical samples from metastatic sites, if available. To benefit from the treatment according to the invention, in particular the preferred treatment according to the invention, the human, human patient or patient preferably does not have a RAS or BRAF mutation, in particular does not have a documented RAS or BRAF mutation.
[0053] Particularly preferred dosing regimens according to the invention are described directly below and comprise or preferably consist of the following: Treatment is administered intravenously in two-week cycles, with each cycle (2 weeks) consisting of the following: Cetuximab: 400 milligrams per square meter (preferably intravenously over 120 minutes), followed by 250 milligrams per square meter per week (preferably intravenously over 60 minutes) or 500 mg / m2 every 2 weeks (preferably by infusion, given over 120 minutes initially, then 60-90 minutes thereafter) + (60 minutes [± 5 minutes] after completion of cetuximab infusion) Avitusumab: 1,000 milligrams every 2 weeks (preferably intravenously over 60 minutes) + (60 minutes [± 5 minutes] after completion of avituzumab infusion) FOLFIRI: Every 2 weeks Irinotecan 180 mg / m2 given intravenously over 30-90 minutes on day 1 Folinic acid (preferably racemic) 400 mg / m2 intravenously over 120 minutes on day 1 5-FU 400 mg / m2 bolus on day 1 5-FU2, 400 milligrams per square meter, is given intravenously over 46 hours, preferably on days 1 and 2.
[0054] However, cetuximab and FOLFIRI will preferably be administered in accordance with local standards and in line with recommendations of international guidelines (NCCN, ESMO, etc.) Adjustments in the dose of cetuximab and FOLFIRI will be performed at the discretion of the investigator, preferably according to the package insert or locally accepted practice. Typically, the schedule would be cetuximab, followed by avituzumab (or other growth factor or monoclonal antibody targeting a growth factor receptor) and FOLFIRI (or other chemotherapy, preferably FOLFOX), respectively. Preferably, there should always be a 1 hour gap between the end of the cetuximab (or other growth factor or monoclonal antibody targeting growth factor receptor) infusion and the start of the avituzumab infusion. Preferably, there should always be a 1 hour gap between the end of the avituzumab infusion and the start of the FOLFIRI (or other chemotherapy, preferably FOLFOX) infusion, respectively, to allow for the evaluation of drug-related side effects. The therapeutic regimen according to the invention should preferably be applied for at least 6 cycles, more preferably at least 8 cycles, especially at least 10 cycles. The therapeutic regimen according to the invention is preferably continued until disease regression or disease progression, unless unacceptable toxicity occurs.
[0055] Avituzumab (EMD 525797) (mAb DI 17E6) is currently available as a sterile solution for intravenous infusion. Avituzumab is preferably formulated as a 25 milligram / milliliter solution in buffered saline containing sodium chloride as a stabilizer and isotonicity agent. Typically, 1000 milligrams of avituzumab is infused intravenously over a period of 1 hour (± 5 minutes), preferably using a microprocessor-controlled infusion pump to obtain a constant infusion rate. Typically, administration of avituzumab is performed on day 1 (preferably 60 minutes [± 5 minutes] after completion of infusion of cetuximab (or other growth factor or monoclonal antibody targeting a growth factor receptor)) and then every 2 weeks, i.e., preferably on day 1 of each 2-week or about 2-week cycle.
[0056] Confirmation of RAS WT mCRC by local laboratories is recommended prior to treatment or screening, and high expression of αvβ6 integrin is preferably determined by a central laboratory prior to treatment and / or screening. Preferably, screening consists of one or more of the following: [Table 4]
[0057] Preferred objectives to be addressed with the treatment methods according to the invention preferably include progression-free survival (PFS), overall survival (OS), objective response rate (ORR), depth of response (DPR), early tumor shrinkage (ETS), and / or rate of secondary resection with potentially curative intent. Depth of response (DPR) is preferably determined as the maximum rate of tumor shrinkage during treatment. Early tumor shrinkage (ETS) is preferably determined as the percentage of patients who achieve a reduction in the sum of the longest tumor diameters of ≥20% from baseline. The potentially curative secondary resection rate is preferably determined as follows. Patients in whom resectability of metastatic disease is identified during study treatment should undergo surgical resection of the metastatic disease. Within the scope of this clinical trial protocol, if secondary resection of metastatic tumors is to be performed with curative intent, an objective response (CR or PR) must be demonstrated beforehand.
[0058] The known monoclonal anti-αv antibody with the registered and recommended international nonproprietary name (INN) “avituzumab” may also be referred to as DI-17E6, DI17E6, EMR62242, or EMD 525797. Avitusumab is a specifically tailored IgG2 hybrid monoclonal antibody against alpha-v integrin (receptor). Details of this antibody are described in WO 2009 / 010290, the disclosures of which are preferably incorporated herein by reference in their entirety.
[0059] The hypervariable regions (CDRs) of Avitusumab are derived from murine mAb 17E6 (EMD 73034). This parent murine IgG1 antibody is described, for example, in Mitjans et al. (1995; J. Cell Sci. 108, 2825), and in U.S. Pat. No. 5,985,278 and European Patent No. 719,859. Murine mAb 17E6 is produced by hybridoma cell line 272-17E6 and is deposited under the accession number DSM ACC2160. The light chain domain of Avitusumab is derived from the humanized monoclonal anti-EGFR antibody 425 (Matuzumab). This antibody is described in detail, for example, in European Patent No. 0531472B1 and is derived from the murine counterpart 425 (murine MAb425, ATCC HB9629). This antibody was expressed against the human A431 cancer cell line and found to bind to a polypeptide epitope on the ectodomain of the human epidermal growth factor receptor (EGFR). Matuzumab has shown high efficacy in clinical trials.
[0060] Generally, the anti-αv integrin antibody avituzumab / DI17E6 used in accordance with the present invention includes: (i) CDR light and heavy chain regions derived from the mouse monoclonal anti-αv integrin antibody 17E6 (ii) a light chain framework region taken from humanized monoclonal anti-EGFR antibody 425; (iii) a heavy chain framework region derived from the mouse monoclonal anti-αv integrin antibody 17E6, optionally including one or more mutations of amino acids at specific positions; and (iv) a heavy chain constant region derived from human IgG2, and a human kappa light chain constant region, in which the IgG2 domain has the IgG2 hinge region replaced by a human IgG1 hinge domain; and Here, optionally one or more mutations within IgG2 have been made.
[0061] Specifically, the treatment, preferably the treatment described and / or claimed in this specification, preferably the avituzumab / DI17E6 (also referred to as "DI17E6γ2h(N297Q)" or "EMD525797") used in the clinical trials described above and below, has the following amino acid sequence: [ka]
[0062] Here, the underlined sequences represent the variable regions with CDRs (bold is identical to the parent mouse antibody), the modified IgG1 hinge region is represented as EPKSSDKTHTCPPCP (SEQ ID No. 3), and AQ is a substitution in the IgG2 domain.
[0063] However, as shown in WO 2009 / 010290, variants of DI17E6 may also be used according to the concept of the present invention. Thus, variants of DI17E6 comprising one or more modifications in the framework regions of the heavy chain include: [ka]
[0064] The variants are mutated at one or more of the bold and underlined positions and can be used to treat prostate cancer patients as described. More specifically, the heavy chain framework regions are mutated at one, more than one, or all of the following positions: A9, E13, M20, K38, R40, A72, S76, Q82, G85, T87, S91, and S113. These variants exhibit the same or very similar biological activity and efficacy as compared to DI17E6 as defined in the sequence above.
[0065] In general, the invention described also includes modified and variant DI17E6 antibodies that are functionally and / or pharmaceutical identical or similar to unmodified DI17E6, in which the CDR regions and the heavy and light chain variable regions are at least 90%, at least 95%, at least 98%, or at least 99% identical in amino acid sequence to the respective variable regions of DI17E6. Furthermore, the invention also preferably includes modified and variant DI17E6 antibodies that are functionally and / or pharmaceutical identical or similar to unmodified DI17E6, in which the constant regions are at least 90%, at least 95%, at least 98%, or at least 99% identical in amino acid sequence to the respective constant regions of DI17E6. The constant region of the IgG chain of the antibody may be altered to improve certain properties, such as immunogenicity or ADCC. Preferably, the described invention also includes modified and variants of DI17E6 antibodies that are functionally and / or pharmaceutical identical or similar to (unmodified) DI17E6 or avituzumab, where the heavy and light chain variable regions are at least 95%, at least 98%, at least 99%, at least 99.5% or at least 99.9% identical in amino acid sequence to the respective heavy and light chain variable regions of DI17E6. Furthermore, the invention also includes modified and variants of DI17E6 antibodies that are functionally and / or pharmaceutical identical or similar to unmodified DI17E6, where preferably, as described above, the constant regions are at least 90%, at least 95%, at least 99%, at least 99.5% or at least 99.9% identical in amino acid sequence to the respective constant regions of DI17E6. The constant region of the IgG chain of the antibody may be altered to improve certain properties, such as immunogenicity or ADCC.
[0066] More preferably, the described invention also includes modified and variants of DI17E6 antibodies that are functionally and / or pharmaceutical identical or similar to (unmodified) DI17E6 or avituzumab, in which the CDR regions on the heavy and / or light chain variable regions are at least 90%, at least 92%, at least 94%, at least 96%, at least 98%, or at least 99% identical in amino acid sequence to the respective CDR regions on the heavy and / or light chain variable regions of DI17E6. Furthermore, the present invention also includes modified and variants of DI17E6 antibodies that are functionally and / or pharmaceutical identical or similar to unmodified DI17E6, in which, as described above, the constant regions are at least 90%, at least 95%, at least 99%, at least 99.5%, or at least 99.9% identical in amino acid sequence to the respective constant regions of DI17E6. Particularly preferably, the described invention also includes modified and variants of DI17E6 antibodies that are functionally and / or pharmaceutical identical or similar to (unmodified) DI17E6 or avituzumab, in which the heavy and light chain CDR regions are 100% identical to (unmodified) DI17E6 or avituzumab, but the heavy and light chain variable regions other than said CDR regions are at least 95%, at least 98%, at least 99%, or at least 99.5% identical in amino acid sequence to the respective heavy and light chain variable regions of DI17E6. Furthermore, the present invention also preferably includes modified and variants of DI17E6 antibodies that are functionally and / or pharmaceutical identical or similar to unmodified DI17E6, in which, as described above, the constant regions are at least 90%, at least 95%, at least 99%, at least 99.5%, or at least 99.9% identical in amino acid sequence to the respective constant regions of DI17E6. Particularly preferably, the described invention also includes modified and variants of DI17E6 antibodies that are functionally and / or pharma- ceutically identical or similar to (unmodified) DI17E6 or avituzumab, in which the CDR regions on the heavy chain variable region and / or light chain variable region are at least 90%, at least 92%, at least 94%, at least 96%, or at least 98% identical in amino acid sequence to the respective CDR regions on the heavy chain variable region and / or light chain variable region of DI17E6, and the heavy and light chain variable regions other than said CDR regions are at least 95%, at least 98%, at least 99%, or at least 99.5% identical in amino acid sequence to the respective heavy and light chain variable regions of DI17E6. Furthermore, the present invention also includes modified and variant DI17E6 antibodies that are preferably functionally and / or pharma- ceutically identical or similar to unmodified DI17E6, and preferably, as described above, the constant regions are at least 90%, at least 95%, at least 99%, at least 99.5%, or at least 99.9% identical in amino acid sequence to the respective constant regions of DI17E6.
[0067] Furthermore, particularly preferred for the uses described herein are modifications or variants of the DI17E6 antibody, preferably functionally and / or pharma- ceutically identical or similar to (unmodified) DI17E6 or avituzumab and comprising the sequence according to SEQ ID No.1 and / or the sequence according to SEQ ID No.2, in which 1 to 10 amino acids, preferably 1 to 5 amino acids, in particular 1 to 3 amino acids of sequence SEQ ID No.1 and / or sequence SEQ ID No.2 are replaced by different amino acids, preferably different naturally occurring amino acids. Therefore, further particularly preferred for the uses described herein are modifications or variants of the DI17E6 antibody, preferably functionally and / or pharma- ceutically identical or similar to (unmodified) DI17E6 or to avituzumab, which consist of a sequence according to SEQ ID No.1 and / or a sequence according to SEQ ID No.2, in which 1 to 10 amino acids, preferably 1 to 5 amino acids, in particular 1 to 3 amino acids of the sequence of SEQ ID No.1 and / or of the sequence of SEQ ID No.2 are replaced by different amino acids, preferably different naturally occurring amino acids. Thus, further particularly preferred for the uses described herein are modifications or variants of the DI17E6 antibody, preferably functionally and / or pharma-ceutically identical or similar to (unmodified) DI17E6 or to avituzumab, which comprise a sequence having at least 98%, preferably at least 99%, in particular at least 99.9% identity to the sequence of SEQ ID No.1 and / or SEQ ID No.2. Therefore, further particularly preferred for the uses described herein are modifications or variants of the DI17E6 antibody, preferably functionally and / or pharma- ceutically identical or similar to (unmodified) DI17E6 or avituzumab and consisting of a sequence having at least 98%, preferably at least 99%, in particular at least 99.9% identity to the sequence of SEQ ID No. 1 and / or SEQ ID No. 2.
[0068] Particularly preferably, the DI17E6 antibody or avituzumab is a recombinant deimmunized monoclonal antibody of the IgG2 subclass described above and below, which targets and inhibits ligand binding to human αv-integrin. Particularly preferably, the glycan structures normally present in the Fc region of the DI17E6 antibody or avituzumab are removed by genetically altering the amino acid residues that normally serve as attachment points, resulting in aglycosylated molecules. Particularly preferably, the antibody is composed of four polypeptide chains, two identical heavy chains of 447 amino acids and two identical light chains of 214 amino acids. In general, the four chains are linked by a combination of covalent (disulfide) and non-covalent bonds. The approximate molecular weight is 145 kDa. However, the most preferred for all methods, applications and treatments is the antibody with the registered International Nonproprietary Name (INN) Avitusumab. PK evaluation of Avituzumab after single and multiple doses indicates that it will preferably behave according to a receptor-mediated clearance model, as described for other antibodies targeting membrane-bound receptors. Similar to the results of previous studies in healthy volunteers, Avituzumab PK in patients with mCRPC is dose-dependent, with clearance determined primarily by the availability of unbound receptors. At the preferred Avituzumab doses, it can be assumed that at doses of 1000 milligrams or more, nearly all receptors are preferably saturated, and preferably contribute little or no to the clearance of the drug.
[0069] As used herein, the term "chemotherapy" is understood in the art and is preferably understood as a type of cancer treatment that uses one or more anti-cancer drugs (chemotherapeutic agents) as part of a chemotherapy regimen. The term "chemotherapeutic agent" or "chemotherapeutic agent" or "antineoplastic agent" is, according to the understanding of the present invention, preferably considered as a member of the class of "cytotoxic agents" and / or "cytostatic agents" and includes chemical agents that exert an anti-neoplastic effect, i.e. preventing the development, maturation or spread of neoplastic cells, directly on tumor cells, and not indirectly through mechanisms such as biological response modification. Suitable chemotherapeutic agents according to the present invention are preferably natural or synthetic chemical compounds, although biological molecules other than proteins, polypeptides, etc. are preferably not explicitly excluded. Examples of chemotherapeutic agents or drugs preferably include alkylating agents such as nitros mustards, ethylenimine compounds, alkylsulfonates, and compounds with alkylating action such as nitrosoureas, cisplatin, and dacarbazine; antimetabolites such as folic acid, purine, or pyrimidine antagonists; mitotic inhibitors such as derivatives of vinca alkaloids and podophyllotoxin; cytotoxic antibiotics and camptothecin derivatives.
[0070] Preferred chemotherapeutic agents or chemotherapy include amifostine (Ethyol), cabazitaxel, cisplatin, dacarbazine (DTIC), dactinomycin, docetaxel, mechlorethamine, streptozocin, cyclophosphamide, carnastine (BCNU), lomustine (CCNU), doxorubicin (Adriamycin), doxorubicin lipo (Doxyl), gemcitabine (Gemzar), daunorubicin, daunorubicin lipo (Daunosome), procarbazine, ketoconazole, mitomycin, cytarabine, etoposide, methotrexate, 5-fluorouracil (5-FU), vinblastine, vincristine, bleomycin, paclitaxel (Taxol), docetaxel (Taxotere), aldesleukin, , asparaginase, busulfan, carboplatin, cladribine, camptothecin, CPT-11, 10-hydroxy-7-ethyl-camptothecin (SN38), dacarbazine, floxuridine, fludarabine, hydroxyurea, ifosfamide, idarubicin, mesna, interferon alpha, interferon beta, irinotecan, mitoxantrone, topotecan, leuprolide, megestrol, melphalan, mercaptopurine, plicamycin, mitotane, pegaspargase, pentostatin, pipobroman, plicamycin, streptozocin, tamoxifen, teniposide, testolactone, thioguanine, thiotepa, uracil mustard, vinorelbine, chlorambucil, and combinations thereof. More preferred chemotherapeutic agents according to the present invention for combination with avituzumab are cabazitaxel, cisplatin, docetaxel, gemcitabine, doxorubicin, paclitaxel (taxol), irinotecan, and bleomycin. Further preferred chemotherapeutic agents according to the present invention for use in combination with avituzumab are preferably selected from the group consisting of irinotecan, fluorouracil (5-FU), tegafur / uracil (UFT), folinic acid (leucovorin), oxaliplatin (eloxatin), aflibercept, regorafenib, capecitabine, and prodrugs thereof, and salts and solvates thereof. The most preferred chemotherapeutic agents according to the present invention for combination with avituzumab are preferably Any of the following: irinotecan, fluorouracil (5-FU), and folinic acid (leucovorin), and prodrugs thereof; or any selected from the group consisting of oxaliplatin, fluorouracil (5-FU), and folinic acid (leucovorin), and prodrugs thereof; and salts and solvates thereof, It is.
[0071] Avitusumab is typically administered by intravenous injection, but other administration methods convenient in the field of antibody / protein pharmaceuticals can be applied. All standard infusions and formulations, including liposomal formulations, as described in WO2005 / 077414 and WO2003 / 053465, can be applied. Furthermore, it is preferable to provide human serum albumin nanoparticles loaded with DI17E6 and, optionally, chemotherapeutic agents (to enhance cytotoxicity) (Biomaterials 2010, 8, 2388-98; Wagner et al.). Unless otherwise clearly defined, the nomenclature of an active ingredient, active principle (API), medicinal product or its International Nonproprietary Name (INN) preferably includes all prodrugs, salts, and solvates thereof, in particular those which are considered functional equivalents and / or suitable substitutes from a clinical point of view. Unless expressly defined otherwise, the terms human, human being, human patient, or patient are preferably used interchangeably or as synonyms herein. Unless expressly defined otherwise, the terms human, human patient, or (simply) patient are preferably used interchangeably or as synonyms herein. Unless expressly defined otherwise or if contrary to the context in which a term is used, the use of a term in the singular form preferably means to include that very term in the plural form and the use of a term in the plural form preferably means to include that very term in the singular form.
[0072] Particularly preferred according to the present invention are subject matter described herein, in which properties of two or more preferred, more preferred, and / or particularly preferred embodiments, aspects, and / or objects are combined in one embodiment, aspect, and / or object. Preferably, according to the present invention, preferred subject matter or embodiments can be combined with other preferred subject matter or embodiments, more preferred subject matter or embodiments can be combined with other less preferred or even more preferred subject matter or embodiments, particularly preferred subject matter or embodiments can be combined with other just preferred or just even more preferred subject matter or embodiments, etc.
[0073] The term "about" as used herein in connection with numbers, values, ranges, and / or amounts preferably means "about" and / or "approximately", the meanings of which are well known in the art and preferably include the variance, deviation, and / or variation of the respective numbers, values, ranges, and amounts of plus / minus 15%, in particular plus / minus 10%. In any event, the term "about" as used herein in connection with numbers, values, ranges, and / or amounts preferably means "about" and / or "approximately," the meanings of which are well known in the art and preferably include at least a variance, deviation, and / or variation of the respective numbers, values, ranges, and amounts of plus / minus 5%.
[0074] The terms "disorder" and "disease" as used herein are well known and understood in the art. In the context of the present invention, they are preferably used as synonyms and are therefore preferably interchangeable unless the context in which they are used herein strongly suggests otherwise. Thus, the terms "fibrotic disorder" and "fibrotic disease" as used herein are also well known and understood in the art. In the context of the present invention, they are preferably used as synonyms and are therefore preferably interchangeable unless the context in which they are used herein strongly suggests otherwise.
[0075] In medical contexts, such as (but not limited to) treatment regimens, dosing schedules, and clinical trial designs, the terms "week", "month", and "year" may be used with slight deviations from the Gregorian definitions, taking into account convenience and / or ease of use for patients, medical staff, and / or physicians, reliability and / or reproducibility of results, etc. For example, in said medical contexts, a month is often referred to as having 28 days, and a year as having 48 weeks. Thus, in the context of the present invention, the term "week" or "weekly" preferably means a period of about 5, about 6, or about 7 days, more preferably about 7 days. In the medical context, the term "month" or "month" preferably refers to a period of about 28 days, about 29 days, about 30 days, or about 31 days, more preferably a period of about 28 days, about 30 days, or about 31 days. In the medical context, the term "year" or "1 year" preferably refers to a period of about 12 months, or about 48 weeks, about 50 weeks, or about 52 weeks, more preferably 12 months, or about 48 weeks, or about 52 weeks.
[0076] The present invention will now be described in more detail with reference to the following examples, which are not intended to be limiting, but may be practiced throughout the scope of the claims. Furthermore, the following examples are given to help those skilled in the art to better understand the present invention by way of illustration. The examples are not intended to limit the scope of protection afforded by the claims. The features, properties and advantages illustrated for the processes, compounds, compositions and / or uses defined in the examples can be assigned to other processes, compounds, compositions and / or uses not specifically described and / or defined in the examples but falling within the scope defined in the claims. Thus, the following examples further illustrate the invention but do not limit the scope of the invention and claims. The following examples illustrate the invention in more detail but are not intended to limit the scope of the invention and claims. EXAMPLES
[0077] Avitusumab versus cetuximab plus irinotecan versus cetuximab plus irinotecan alone in patients with KRAS wild-type metastatic colorectal cancer: the randomized phase I / II POSEIDON trial See also: Annals of Oncology 26: 132-140, 2015 Background: Integrins are involved in tumor progression or metastasis and are differentially expressed in colorectal cancer (CRC) cells. Avitusumab (EMD 525797), a humanized monoclonal antibody targeting the integrin αv heterodimer, has shown activity in preclinical studies. This study was designed to evaluate the tolerability of different doses of avituzumab in combination with cetuximab and irinotecan (phase I part), to evaluate the efficacy and tolerability of combination with cetuximab and irinotecan, and to investigate the efficacy and tolerability of cetuximab and irinotecan (phase II part) in patients with metastatic CRC (mCRC). Methods: Patients with KRAS (exon 2) wild-type mCRC who had previously received oxaliplatin-containing therapy were included. The study consisted of an initial run-in to confirm the safety of up to 1000 mg avituzumab in combination with standard of care (SoC: cetuximab + irinotecan) and a phase 2 study in which patients were assigned 1:1:1 to receive avituzumab 500 mg (arm A) or 1000 mg (arm B) every 2 weeks in combination with SoC or SoC alone (arm C). The primary endpoint was investigator-assessed progression-free survival (PFS). Secondary endpoints included overall survival (OS), response rate (RR), and tolerability. We also evaluated the association between tumor integrin expression and outcome. RESULTS: In the phase I study, doses of avituzumab up to 1000 mg were well tolerated in combination with SoC. Seventy-three (arm A), 71 (arm B), and 72 (arm C) patients were randomly assigned to the phase II study. Baseline characteristics were well balanced. PFS was similar in the three groups: hazard ratio (HR) 1.13 [95% confidence interval (CI) 0.78 to 1.64] for arm A vs. SoC; HR 1.11 (95% CI 0.77 to 1.61) for arm B vs. SoC. RR was also similar. There was a trend toward improved OS: HR 0.83 (95% CI 0.54 to 1.28) for arm A vs. SoC; HR 0.80 (95% CI 0.52 to 1.25) for arm B vs. SoC. Treatment-emergent adverse events of grade 3 or higher occurred in 72%, 78%, and 67% of patients.High tumor integrin αvβ6 expression was associated with longer OS in treatment arms A [HR 0.55 (0.30-1.00)] and B [HR 0.41 (0.21-0.81)] compared with treatment arm C. Conclusions: Although the primary endpoint of PFS was not met, predefined exploratory biomarker analyses identified a subgroup of patients who may benefit from avituzumab. The combination of avituzumab with cetuximab and irinotecan was tolerable. Further studies are warranted. ClinicalTrials.gov Identifier: NCT01008475 Keywords: avituzumab, colorectal cancer, integrin, biomarker, monoclonal antibody, phase I / II
[0078] introduction Over the past two decades, the treatment options for metastatic colorectal cancer have expanded with the introduction of chemotherapy, such as irinotecan and oxaliplatin, and targeted agents, such as cetuximab, panitumumab, aflibercept, regorafenib, and bevacizumab [1: Van Cutsem E, Cervantes A, Nordlinger B et al. Metastatic colorectal cancer: ESMO Clinical Practice Guidelines for diagnosis, treatment and follow-up. Ann Oncol 2014; 25(suppl 3): iii1-iii9]. This has improved the prognosis of patients, but most patients still die of their disease. As our understanding of the molecular biology of CRC improves, new therapies targeting factors essential for tumor growth and progression offer the best hope for improving patient outcomes [2: Ciombor KK, Berlin J. Targeting metastatic colorectal cancer-present and emerging treatment options. Pharmgenomics Pers Med 2014; 7: 137-144]. Integrins are a family of transmembrane heterodimeric glycoproteins (containing α and β subunits) that mediate a variety of cell-cell and cell-extracellular matrix (ECM) interactions in both normal and tumor cells [3: Goodman SL, Picard M. Integrins as therapeutic targets. Trends Pharmacol Sci 2012; 33: 405-412]. Integrins promote tumor cell survival, metastasis, and angiogenesis [4: Nemeth JA, Nakada MT, Trikha M et al. Alpha-v integrins as therapeutic targets in oncology. Cancer Invest 2007; 25: 632-646].Studies have shown that integrins αvβ5 and αvβ6 are expressed on CRC cells, and integrins αvβ3 and αvβ5 are expressed on tumor-associated blood vessels [5, 6: Goodman SL, Grote HJ, Wilm C. Matched rabbit monoclonal antibodies against αv-series integrins reveal a novel αvβ3-LIBS epitope, and permit routine staining of archival paraffin samples of human tumors. Biol Open 2012; 1: 329-340; Agrez MV, Bates RC, Mitchell D et al. Multiplicity of fibronectin-binding alpha V integrin receptors in colorectal cancer. Br J Cancer 1996; 73: 887-892]. Overexpression of integrin αvβ6 is associated with a significant decrease in median overall survival (OS) in patients with early-stage mCRC [7: Bates RC, Bellovin DI, Brown C et al. Transcriptional activation of integrin β6 during the epithelial-mesenchymal transition defines a novel prognostic indicator of aggressive colon carcinoma. J Clin Invest 2005; 115: 339-347]. Thus, αv integrins, and especially αvβ6, are rational targets for the treatment of mCRC. The humanized monoclonal IgG2 antibody avituzumab (EMD 525797) specifically binds to the αv integrin subunit and inhibits its interaction with ligands in the ECM.This may disrupt cell attachment and motility and induce apoptosis. [3, 8: Goodman SL, Picard M. Integrins as therapeutic targets. Trends Pharmacol Sci 2012; 33: 405-412; Mitjans F, Sander D, Adan J et al. An anti-alpha v-integrin antibody that blocks integrin function inhibits the development of a human melanoma in nude mice. J Cell Sci 1995; 108(Pt 8): 2825-2838]. Preclinical studies have confirmed the antitumor activity of avituzumab in human tumor xenograft models, and avituzumab in combination with cetuximab or irinotecan was more active than either agent alone. [Merck KGaA, in-house data].Furthermore, abituzumab monotherapy has been shown to be well tolerated in clinical trials [9, 10: Uhl W, Zuhlsdorf M, Koernicke T et al. Safety, tolerability, and pharmacokinetics of the novel alphav-integrin antibody EMD 525797 (DI17E6) in healthy subjects after ascending single intravenous doses. Invest New Drugs 2014; 32: 347-354; Wirth M, Heidenreich A, Gschwend JE et al. A multicenter phase 1 study of EMD 525797 (DI17E6), a novel humanized monoclonal antibody targeting alphav integrins, in progressive castration-resistant prostate cancer with bone metastases after chemotherapy. Eur Urol 2014; 65: 897-904]. We conducted a phase I / II study to evaluate the tolerability of different doses of avituzumab in combination with irinotecan and cetuximab, the standard of care (SoC) for mCRC, in patients with KRAS exon 2 wild-type mCRC previously treated with oxaliplatin. The phase II study compared the efficacy of avituzumab plus irinotecan and cetuximab with that of irinotecan and cetuximab in these patients.
[0079] Patients and methods Study Design and Treatment This open-label, multicenter, phase I / II study (ClinicalTrials.gov identifier: NCT01008475) was approved by the institutional review boards of each institution. All patients provided informed consent before enrollment. The study was conducted in accordance with the principles of the Declaration of Helsinki. The phase I dose-escalation study employed a classical "3+3" design, in which eligible patients received 250, 500, 750, or 1000 mg of avituzumab intravenously every 2 weeks in combination with SoC. The dose of avituzumab was selected based on a pharmacokinetic (PK) model of a potentially effective dose range, guided by target saturation. Cetuximab was administered at 400 mg / m2 on day 1 of the first cycle, followed by 250 mg / m2 weekly. Avituzumab was administered ≥60 min after the end of the cetuximab infusion, and irinotecan 180 mg / m2 (maximum body surface area 2.0 m2) was administered ≥60 min after the end of the avituzumab infusion, and infusion-related adverse events were assessed. Treatment was continued until disease progression or unacceptable toxicity. Dose-limiting toxicity (DLT) was defined as treatment-related death within 2 weeks of treatment initiation; or grade 3 / 4 nonhematologic or grade 4 hematologic toxicity related to study treatment. Expected toxicities of cetuximab and irinotecan (e.g., afebrile grade 4 neutropenia or leukopenia lasting ≤5 days, grade 3 / 4 diarrhea without adequate supportive care) were not included as DLTs [11: Elez E, Kocakova I, Hohler T et al. Phase I study of EMD 525797 (DI17E6), an antibody targeting αvβ integrins, in combination with cetuximab and irinotecan, as a second-line treatment for patients with k-ras wild-type metastatic colorectal cancer. J Clin Oncol 2012; 30(suppl): abstract 3539].In the randomized phase II study, patients were centrally randomized 1:1:1 to receive either 500 mg avituzumab or 1000 mg avituzumab every 2 weeks in combination with SoC or SoC (cetuximab weekly and irinotecan every 2 weeks) (see Figure 4, available online in the Annals of Oncology). The choice of two doses of avituzumab in the phase II study was driven by insufficient data from the phase I study, and one dose was chosen to achieve different levels of target saturation, primarily through PK guidance: 500 mg avituzumab every 2 weeks was chosen to achieve serum concentrations that had been confirmed as active in preclinical studies; 1000 mg avituzumab every 2 weeks was chosen to achieve steady-state serum trough concentrations that were always above the IC99 of the nonlinear clearance pathway between doses. Patients were stratified according to whether they had received prior anti-vascular endothelial growth factor (VEGF) therapy. Treatment continued until investigator-assessed radiographic disease progression, unacceptable toxicity, eligibility for curative resection (investigator assessment), or withdrawal of consent.
[0080] patient Adults aged 18 years or older with histologically confirmed KRAS exon 2 wild-type mCRC, confirmed distant metastases, and at least one radiographically measurable disease in a previously unirradiated site were included. All patients had to have failed prior oxaliplatin / fluoropyrimidine-containing regimens, defined as disease progression within 6 months of the last dose or intolerance. Patients had Eastern Cooperative Oncology Group (ECOG) performance status of 0 or 1 or Karnofsky performance status of 80% or higher and acceptable laboratory parameters (absolute neutrophil count ≥ 1.5 × 109 / liter, platelet count ≥ 100 × 109 / liter, hemoglobin ≥ 9 grams / deciliter, bilirubin ≥ 1.5 × upper limit of normal, etc.). Major exclusion criteria included prior treatment with epidermal growth factor receptor inhibitors, known brain metastases, clinically relevant coronary artery disease, uncontrolled hypertension, and history of myocardial infarction within the past 12 months.
[0081] evaluation All patients were required to provide tumor masses for KRAS mutation analysis and assessment of integrin expression at screening. Expression of integrins αvβ3, αvβ5, αvβ6, αvβ8, and pan-αv was assessed using immunohistochemistry in formalin-fixed paraffin-embedded tumor tissues [5: Goodman SL, Grote HJ, Wilm C. "Matched rabbit monoclonal antibodies against αv-series integrins reveal a novel αvβ3-LIBS epitope, and permit routine staining of archival paraffin samples of human tumors. Biol Open 2012; 1: 329-340]. Staining intensity and frequency data were used to calculate a histoscore on a continuous scale from 0 to 300 [Pirker R, Pereira JR, von Pawel J et al.EGFR expression as a predictor of survival for first-line chemotherapy plus cetuximab in patients with advanced non-small cell lung cancer: analysis of data from the phase 3 FLEX study. Lancet Oncol 2012; 13: 33-4]. Patients were monitored for treatment-emergent adverse events (TEAEs) from study entry through 31 days after the last dose of study drug. Causal relationship of TEAEs to study drug was assessed by the investigator. Tumors were assessed imaging with computed tomography (CT) or magnetic resonance imaging (MRI) scans at baseline and every 6 weeks from the date of randomization until disease progression or death.RECIST was used to objectively assess response [13: Therasse P, Arbuck SG, Eisenhauer EA et al. New guidelines to evaluate the response to treatment in solid tumors. European Organization for Research and Treatment of Cancer, National Cancer Institute of the United States, National Cancer Institute of Canada. J Natl Cancer Inst 2000; 92: 205-216]. Complete and partial responses (CR or PR) had to be confirmed by a scan ≥6 weeks after the initial scan. In this randomized phase II study, all scans were reviewed by an independent review committee. All patients who withdrew from the study after the initial screening for reasons other than death without tumor evaluation underwent a definitive treatment evaluation, including a CT or MRI scan.
[0082] Statistical considerations Descriptive statistics were used to summarize the primary endpoint of phase I, protocol-defined DLTs, and other data for each dose level. The primary endpoint of the randomized phase II trial was progression-free survival (PFS), defined as the time from randomization to disease progression within 12 weeks after the last tumor assessment or death from any cause. A sample size of 213 patients (71 in each group) was planned to observe 173 PFS events required to reject the null hypothesis of no drug activity, with 85% power, assuming a hazard ratio (HR) for SoC of 0.67, an increase in median PFS from 4.0 months with SoC to 6.0 months with avituzumab-based treatment, and a significance level (α) of 25% (two-sided). Secondary endpoints of the phase II portion included OS, time to progression, time to treatment failure, response rate, and disease control rate, as well as safety. Prespecified exploratory endpoints included associations between tumor integrin expression and efficacy. The primary efficacy analysis used the intent-to-treat (ITT) population, which included all randomized patients. Safety analyses included all patients who received at least one dose of any study drug. Data were summarized using descriptive statistics. Analysis of time-to-event endpoints used log-rank tests stratified by prior anticancer drug therapy (anti-VEGF or not). HRs were estimated using Cox proportional hazards models with treatment and prior anticancer drug therapy (anti-VEGF or not) as covariates. Statistical analyses were performed using the SAS® System (version 8.2 or later). For the evaluation of the exploratory endpoint of the association between tumor integrin expression and patient outcomes, the median histoscore was initially used as the cutoff between high and low expression. The cutoff was then varied around the median to assess whether the median was acceptable for the patient population studied.
[0083] result Phase I dose escalation study Between October 2009 and October 2010, 16 patients were enrolled in the Phase I dose-escalation study. No DLTs were observed at any dose (see supplementary Table S1, online in the Annals of Oncology; see Table 5 below). However, after the DLT observation period, one of the first three patients died from causes unrelated to avituzumab, so three more patients were enrolled at the 750 mg dose. A fourth additional patient was enrolled because one patient received 250 mg avituzumab instead of the planned 750 mg dose. Avitusumab-related TEAEs were rare and included grade 3 hypokalemia (one patient at the 250 mg dose) and grade 3 tachyarrhythmia (one patient at the 1000 mg dose) (see supplementary Table S1, online in the Annals of Oncology; see Table 5 below). There was no grade 4 neutropenia, grade 3 / 4 thrombocytopenia, or grade 3 / 4 hemoglobin decrease, and no deterioration in renal, hepatic, or pulmonary function or cardiac output. Duration of avituzumab treatment generally increased with increasing dose, with median relative dose intensity greater than 96% at all dose levels. Relative dose intensity of cetuximab and irinotecan was maintained. Antitumor activity was observed at all doses, with one CR, four PR, and seven stable disease (Supplementary Table S1 in the online edition of Annals of Oncology; see Table 5 below). Taken together, these data justify further evaluation of the combination of avituzumab with cetuximab and irinotecan.
[0084] [Table 5] * All patients received first-line oxaliplatin / fluoropyrimidine-containing treatment for MCCC. † Two patients were not evaluable. ‡ CR, PR, or SD was defined as ≥42 days. CR, complete response; ECOG, Eastern Cooperative Oncology Group; PR, partial response; SD, stable disease; TEAE, treatment-emergent adverse events.
[0085] Randomized Phase II Study patient A total of 216 patients were enrolled and randomized between April 2011 and October 2013. The consort diagram is shown in Figure 4. The median (range) study duration was 13.6 (0.1-26.2), 12.3 (0.5-27.3+), and 11.6 (0.6-28.8+) months in the 500 mg, 1000 mg, and SoC groups, respectively. The median total duration of avituzumab treatment was 4.1 months, and the median relative dose intensity was 98%. Baseline characteristics of patients in the three treatment groups were generally well balanced (Table 6). Safety. TEAEs occurred in all patients in the 500 mg, 1000 mg, and SoC groups, and all but one patient (99%) experienced TEAEs of grade 3 or higher (Table 5). TEAEs were observed in 72%, 78%, and 67% of patients in the 500 mg, 1000 mg, and SoC groups, respectively. These data indicate that avituzumab has a tolerable safety profile in combination with cetuximab and irinotecan.However, approximately 50% of TEAEs in the avituzumab group were suspected to be related to avituzumab based on investigator assessment, including grade ≥3 TEAEs that occurred in 17% and 29% of patients in the avituzumab 500 mg and 1000 mg treatment groups; serious TEAEs related to avituzumab included febrile neutropenia, colitis, rectal abscess, peripheral neuropathy, and acute renal failure in the avituzumab 500 mg treatment group; and neutropenia, gastrointestinal infection, and deep vein thrombosis in one patient each in the avituzumab 1000 mg treatment group. At data cutoff, 39 (54%), 35 (51%), and 45 (62%) patients had died in the 500 mg, 1000 mg, and SoC arms, respectively. Two deaths, one in the 1000 mg and one in the SoC arms, were due to sepsis and both were thought to be related to irinotecan, while 32 / 39, 30 / 35, and 38 / 45 deaths were due to disease progression. Efficacy. Efficacy data for the ITT population are shown in Table 7 and Figure 5A-B. According to these data, PFS and response rate (RR) did not differ between treatment arms.Median OS was 15.0 months [95% confidence interval (CI) 10.9-19.2] with abituzumab 500 mg [HR 0.83 (95% CI 0.54-1.28) vs. SoC], 14.4 months (95% CI 9.8-19.3) with abituzumab 1000 mg [HR 0.80 (95% CI 0.52-1.25) vs. SoC], and 11.6 months [95% CI 9.8-15.7] with SoC ( Figure 5B ).
[0086] [Table 6]
[0087] [Table 7]
[0088] Biomarker analysis A preplanned exploratory biomarker analysis conducted to better understand the relationship between αv integrin expression and outcome suggested that high expression of integrin αvβ6 [above the median of the study population (n=197), median histoscore=70] (see figure, Fig. 6, published online in Annals of Oncology) may be negatively prognostic for OS in the SoC treatment group and predict prolonged OS with avituzumab treatment (Figs. 7 and 8, Table 7). It also suggested that patients with tumors with high integrin αvβ6 expression may have improved RR. In contrast, patients with tumors with low integrin αvβ6 expression (below the median) did not seem to benefit from avituzumab treatment (Table 7). The number of patients with tumor integrin αvβ6 histoscore 0 (n=24) was too small to allow for analysis of this population. Pan αv integrin levels (median histoscore=230) appeared to be predictive and prognostic similar to integrin αvβ6, whereas integrin αvβ5 levels were not predictive or prognostic, and integrins αvβ3 and αvβ8 were not expressed (data not shown).
[0089] Consideration This is the first reported clinical trial of an integrin inhibitor in patients with CRC. The addition of avituzumab to cetuximab plus irinotecan showed limited activity in the oxaliplatin-pretreated unselected mCRC population, but prespecified exploratory biomarker analyses suggested that avituzumab may improve OS in patients with tumors with high expression of integrin αvβ6. OS is the gold standard endpoint in cancer clinical trials [14, 15: European Medicines Agency Guideline on the evaluation of anticancer medicinal products in man. In European Medicines Agency (ed), London, UK: European Medicines Agency 2013; Food and Drug Administration. Guidance for Industry: clinical trial endpoints for the approval of cancer drugs and biologics. In Services USDoHaH (ed), Rockville, MD, USA: Food and Drug Administration 2007], and although OS was a secondary endpoint in this study, exploratory biomarker data suggest that further studies with OS as a primary endpoint are warranted in patient populations with high tumor αvβ6 expression. Development of a companion diagnostic test to select the appropriate patient population is crucial for further studies. As a result, patients with high integrin αvβ6 expression had a median OS that was approximately 4 months shorter than those with low integrin expression [HR 1.95 (95% CI 1.04-3.67)], consistent with previous studies showing that high integrin αvβ6 expression is associated with significantly reduced OS in patients with early-stage mCRC.[7: Bates RC, Bellovin DI, Brown C et al. Transcriptional activation of integrin β6 during the epithelial-mesenchymal transition defines a novel prognostic indicator of aggressive colon carcinoma. J Clin Invest 2005; 115: 339-347]. However, this analysis suggests that abituzumab treatment may reduce the risk of death by up to 59% in patients with high tumor integrin αvβ6 expression compared with the control group. Furthermore, abituzumab treatment appears to increase PFS and RR in this population selected for poor prognostic biomarkers. However, no association was shown between integrin αvβ5 levels and clinical outcome, and previous studies have not reported a prognostic or predictive role for integrin αvβ5 in CRC.
[0090] Studies of early cancers suggest that integrin alphavbeta6 is involved in epithelial-mesenchymal transition (EMT) and enhances the invasive behavior of epithelial tumors such as CRC [16: Bates RC. Colorectal cancer progression: integrin alphavbeta6 and the epithelial mesenchymal transition (EMT). Cell Cycle 2005; 4: 1350-1352]. The EMT process may also be involved in metastasis; the presence of high levels of integrin αvβ6 in liver or lymph node metastases suggests a role for integrin αvβ6 in the aggressiveness of mCRC [7, 16: Bates RC, Bellovin DI, Brown C et al. Transcriptional activation of integrin β6 during the epithelial-mesenchymal transition defines a novel prognostic indicator of aggressive colon carcinoma. J Clin Invest 2005; 115: 339-347; Bates RC. Colorectal cancer progression: integrin alphavbeta6 and the epithelial mesenchymal transition (EMT). Cell Cycle 2005; 4: 1350-1352].
[0091] Furthermore, integrin αvβ6 is known to be a potential activator of transforming growth factor-β (TGF-β) that promotes tumor growth and invasion during colon cancer progression [16: Bates RC. Colorectal cancer progression: integrin alphavbeta6 and the epithelial mesenchymal transition (EMT). Cell Cycle 2005; 4: 1350-1352]. Therefore, a therapy that blocks integrin αvβ6 could potentially target tumor cells that invade and metastasize, which may explain the improved OS and PFS observed with avituzumab in patients with tumors that express αvβ6 in this study. TGF-β also plays an important role in regulating immune function, and integrins are essential for this process [17: Travis MA, Sheppard D. TGF-beta activation and function in immunity. Annu Rev Immunol 2014; 32: 51-82]. The possibility that inhibition of tumor integrin αvβ6 by avituzumab reduces the inhibitory effect of TGF-β on antitumor immune responses may explain the benefit of avituzumab on OS rather than PFS and RR. This study has several limitations that need to be considered when interpreting the data. Key is that this is a phase II study and the biomarker data are based on preplanned exploratory analyses, although hypotheses are generated. Further studies should be performed to confirm the prognostic and predictive value of αv integrin in mCRC patients treated with avituzumab. In conclusion, our data suggest that integrin-targeted therapy may be useful in the treatment of certain mCRC patients. Exploratory analyses suggest that treatment with avituzumab may be effective in patients with tumors that have high expression of integrin αvβ6, who would otherwise have a poor prognosis. Further studies in this population and the development of companion diagnostic tests are needed to further evaluate the efficacy of avituzumab in mCRC.
[0092] References TIFF0007597450000015.tif97135 TIFF0007597450000016.tif198135 EXAMPLES
[0093] Patient selection for integrin targeting with avituzumab in patients with metastatic colorectal cancer (mCRC): A retrospective analysis of the randomized phase I / II POSEIDON trial.
[0094] introduction Targeting integrins, particularly αvβ6, is a novel approach for the treatment of mCRC. Histochemical data show that the target of avituzumab (αv integrin) is expressed in tumor vasculature and tumor cells in CRC. In particular, expression of αvβ6 integrin has been analyzed in over 700 mCRC patients and has been proposed as a prognostic factor for CRC. 1-4 (Bates RC, et al. J Clin Invest. 2005;115(2):339-347; Niu Z, et al. Cell Biosci; 2014;4:23; Yang GY, et al. World J Gastroenterol. 2015;21(24):7457-7467; Elez E, et al. Ann Oncol. 2015;26:132-140). High expression of αvβ6 in colon cancer was an indicator of tumor progression and poor patient survival. There is increasing evidence that mCRC is a genetically heterogeneous disease and that tumors arising from different sides of the colon (left vs. right) have different clinical outcomes. 5 (Arnold D, et al. Ann Oncol. 2017;28:1713-1729). Previous analyses comparing the activity of different classes of targeted agents in patients with k-RAS wild-type (WT) or RAS wild-type mCRC suggested that the location (side) of the primary tumor may influence prognosis. This retrospective analysis of αvβ6 data builds on exploratory data from the POSEIDON trial to investigate differences between right-sided and left-sided k-RAS WT CRC and whether there are differences in outcomes between patients with right-sided and left-sided mCRC when treated with avituzumab.
[0095] background POSEIDON (NCT01008475) exploring the activity of avituzumab in combination with cetuximab and irinotecan in second-line k-RAS WT mCRC 4 (Elez E, et al. Ann Oncol. 2015;26:132-140) showed that high expression of αvβ6 was associated with poor prognosis even in the analysis of the cetuximab + irinotecan alone group, suggesting that high expression of αvβ6 is a negative prognostic factor (Figure 7). The primary endpoint of progression-free survival (PFS) in the intent-to-treat population failed to demonstrate a statistically significant benefit in the previous POSEIDON Phase I / II trial in second-line k-RAS WT (k-RAS WT exon-2) mCRC 4 (Elez E, et al. Ann Oncol. 2015;26:132-140). Planned exploratory biomarker analysis suggested that high expression of integrin αvβ6 was a negative prognostic factor for overall survival (OS) in the control group and may predict prolonged OS with avituzumab treatment. 4 (Elez E, et al. Ann Oncol. 2015;26:132-140). Exploratory data analysis from the previous POSEIDON trial showed that administration of abituzumab to patients with high αvβ6 expression (Histoscore > 70) was associated with higher PFS, OS, and objective response rate (ORR), suggesting that high expression of αvβ6 (Histoscore > 70) predicts efficacy of abituzumab (Figure 8).
[0096] method Retrospective analysis of the POSEIDON trial Analysis of integrin αvβ6 expression in formalin-fixed, paraffin-embedded tumor tissues was part of the POSEIDON trial, and a preplanned retrospective analysis of patient material was performed (n=98 high and n=99 low αvβ6 expression). A retrospective analysis of the POSEIDON trial data was performed to correlate the effect of tumor location (left, n=152 vs. right, n=44; one patient had both left and right colon cancer) and integrin αvβ6 expression (low vs. high) on OS, PFS, and ORR when avituzumab was added to irinotecan + cetuximab (Table 8, Figures 9A, 9B).
[0097] [Table 8] TIFF0007597450000018.tif78145 CRC, colorectal cancer; ORR, objective response rate; OS, overall survival; PFS, progression-free survival [Table 9] HR, hazard ratio; OS, overall survival
[0098] conclusion Although the sample size is small, patients with left-sided k-RAS WT mCRC and whose tumors have high expression of αvβ6 integrin benefit most from the addition of avituzumab to irinotecan plus cetuximab compared with irinotecan plus cetuximab alone. No benefit was seen in patients with low Histoscores. In the POSEIDON trial, doses of up to 1,000 mg of avituzumab were well tolerated in combination with irinotecan and cetuximab 5 (Arnold D, et al. Ann Oncol. 2017;28:1713-1729). This retrospective data analysis from the second-line POSEIDON trial supports the observation that there is a difference in treatment response between left-sided and right-sided k-RAS WT mCRC in patients who received EGFR inhibitors such as cetuximab or panitumumab for first-line metastatic disease 5 (Arnold D, et al. Ann Oncol. 2017;28:1713-1729). Alone, αvβ6 integrin expression may be a novel biomarker for mCRC.
[0099] References 1. Bates RC, et al. J Clin Invest. 2005;115(2):339-347.2. Niu Z, et al. Cell Biosci; 2014;4:23. 3. Yang GY, et al. World J Gastroenterol. 2015;21(24):7457-7467 4. Elez E, et al. Ann Oncol. 2015; 26:132-140. 5. Arnold D, et al. Ann Oncol. 2017; 28:1713-1729 EXAMPLES
[0100] Methods for testing for RAS wild type, KRAS wild type, and / or NRAS wild type Therascreen® KRAS RGQ PCR kits and procedures I. General information Generic name of device: Real-time PCR test Device name: therascreen® KRAS RGQ PCR Kit Device Pro Code: OWD Applicant's name and address: QIAGEN Manchester Ltd. Skelton House, Lloyd Street North Manchester, UK M15 6SH Date of advisory recommendation: None Premarket Approval Application (PMA) Number: P110027 FDA Notice of Approval Date: May 23, 2014 Priority: Not applicable The initial PMA (P110030) for the Therascreen® KRAS RGQ PCR Kit was approved on July 6, 2012, to help identify CRC patients for treatment with Erbitux® (cetuximab) based on the absence of a detectable KRAS gene mutation. The SSED supporting the indication is available on the CDRH website and is incorporated herein by reference. This PMA (P110027) has been submitted to expand the indication of the Therascreen® KRAS RGQ PCR Kit.
[0101] II. Indications for Use The Therascreen® KRAS RGQ PCR Kit is a real-time qualitative PCR assay used on the Rotor-Gene Q MDx instrument to detect seven somatic mutations in the human KRAS oncogene using DNA extracted from formalin-fixed, paraffin-embedded (FFPE) colorectal cancer (CRC) tissues. The Therascreen® KRAS RGQ PCR Kit is intended to help identify CRC patients for treatment with Erbitux® (cetuximab) and Vectibix® (panitumumab) based on a test result that shows no detectable KRAS mutations. III. Contraindications none. IV. WARNINGS AND PRECAUTIONS Warnings and precautions are provided on the Therascreen® KRAS RGQ PCR Kit label. V. Device Description The elements that make up the entire device are as follows: QIAGEN QIAamp® DSP DNA FFPE Tissue Kit QIAGEN therascreen® KRAS RGQ PCR Kit QIAGEN Rotor-Gene Q MDx, software version 2.1.0, and KRAS assay package
[0102] Sample preparation Formalin-fixed, paraffin-embedded (FFPE) blocks are sectioned onto glass slides. Stained slides are used to confirm that the tumor content is greater than 20% of the tissue and that there is a minimum tumor area of 4 square millimeters. A single unstained tissue section is scraped off the slide for DNA extraction. Sections with less than 20% tumor content are subjected to macrodissection. DNA is manually extracted and purified from 5 micrometer glass-mounted sections of FFPE tissue from colorectal cancer patients using the QIAGEN QIAamp® DSP DNA FFPE Tissue Kit and a modified protocol. Tumor tissue is deparaffinized with xylene, which is then extracted with ethanol. Samples are dissolved under denaturing conditions with proteinase K for 1 hour. Samples are heated at 90°C to reverse formalin crosslinks in genomic DNA. Samples are passed through a silica-based membrane, which binds genomic DNA to the membrane and removes contaminants. The purified genomic DNA is eluted from the membrane in 200 microliters of elution buffer. The extracted DNA is stored at -20°C.
[0103] PCR amplification and detection The QIAGEN therascreen® KRAS RGQ PCR Kit contains reagents for eight separate reactions: seven mutation-specific reactions that amplify and detect mutations in codons 12 and 13 of exon 2 of the KRAS oncogene, and one control reaction that amplifies and detects a region in exon 4 of the KRAS oncogene. Each reaction in the KRAS RGQ Kit uses ARMS® (Amplification Refractory Mutation System) allele-specific polymerase chain reaction (PCR) to selectively amplify mutated genomic DNA templates (mutation positive) against a background of non-mutated genomic DNA (mutation negative, wild-type), and detects the resulting amplification products in combination with fluorescently labeled Scorpion® primers. ARMS technology exploits the ability of Taq polymerase to discriminate between matches and mismatches at the 3' end of the PCR primer. Scorpion is a bifunctional molecule that covalently links a PCR primer and a probe. The probe incorporates both a fluorophore, carboxyfluorescein (FAM®), and a quencher that quenches the fluorescence of the fluorophore. During PCR, when the probe binds to the ARMS amplicon, the fluorophore and quencher separate, resulting in a detectable increase in fluorescence. Prior to testing in the mutation-specific test reactions, each DNA sample should be tested in a control reaction to determine whether the quality and quantity of DNA is sufficient and appropriate for the working range of the assay. The Ct value of the control reaction is used to assess the total amount of amplifiable DNA in the sample and should be within the prespecified range for each sample. The interpretation of the results obtained in the control reactions is as follows.
[0104] Table 10. Interpretation of results obtained with control reactions [Table 10]
[0105] The run parameters used for evaluation of DNA samples using the control reaction mix were the same as those for mutation analysis using the mutation reaction mix. The run parameters were as follows: (1) hold at 95°C for 15 minutes to activate Taq polymerase; (2) 40 PCR cycles were performed with denaturation at 95°C for 30 seconds and annealing / extension at 60°C for 1 minute. The PCR cycle at which the fluorescence from a particular reaction crosses a predefined threshold is defined as the Ct value. Seven mutations in codons 12 and 13 of the KRAS oncogene detected by the Therascreen® KRAS RGQ Kit are shown below.
[0106] Table 11: Seven mutations in codons 12 and 13 of the KRAS oncogene detected by the Therascreen® KRAS RGQ Kit [Table 11]
[0107] Test Control Each test run should include an internal control, a positive control, and a negative control. If the negative control indicates that the test run contains contaminants (Ct value in the FAM channel exceeds the set value) or if the Ct value of the positive control is outside the set range (both FAM and HEX channels), the test run is considered invalid.
[0108] [Table 12]
[0109] Internal Control All eight reactions contain an additional ARMS primer and a HEX-labeled Scorpion primer for amplification and detection of a synthetic non-KRAS-related oligonucleotide template used as an internal control. The Scorpion primer is HEX-labeled to distinguish it from the FAM-labeled Scorpion in the control and mutation reactions. In each reaction, the internal control reaction is designed to be the weaker of the two reactions. This is achieved by using a very low concentration of internal control template. The internal control reaction is designed to work independently of the mutation-specific amplification, but may fail if there is strong amplification because it is "competed" by the FAM reaction. Mutation-negative results in which any one of the seven mutation reactions fails the internal control reaction are reported as invalid results. The internal control is used to detect inhibitors or failure of the gross reaction. Positive control The positive controls consist of a mixture of synthetic oligonucleotides representing each of the mutations detected by the Therascreen® KRAS RGQ Kit. Detection of the positive controls ensures that each reaction mix in the kit is functioning properly. Negative controls The Therascreen® KRAS RGQ Kit includes nucleic acid-free water for use as a no-template control (NTC) reaction. The NTC serves as a negative control to assess potential contamination during assay setup.
[0110] Equipment and Software The Rotor-Gene Q (RGQ) MDx instrument is a real-time PCR analyzer designed for thermal cycling and real-time detection of amplified DNA. The RGQ MDx instrument is equipped with software to control and monitor the PCR reaction and determine the mutation status based on the PCR results. It employs a centrifugal rotor design for thermal cycling during the PCR reaction, where each tube rotates in an air-flowing chamber. Samples are heated and cooled in a low-mass air oven according to cycles determined by the software to initiate different phases of the PCR cycle, for a total of 40 cycles in each PCR run. In the RGQ MDx instrument, samples are excited from the bottom of the chamber by a light-emitting diode. Energy is transferred through a thin wall at the bottom of the tube. The emitted fluorescence passes through an emission filter on the side of the chamber and is detected by a photomultiplier tube. Detection is performed as each tube is aligned with the detection optics, and the tube rotates past the excitation / detection optics every 150 milliseconds. The fluorescent signal monitors the progress of the PCR reaction. The device supports up to six optical channels (six excitation light sources and six detection filters), however, the Therascreen® KRAS RGQ Kit only uses two of these channels (the FAM channel and the HEX channel). The Therascreen® KRAS Assay Package consists of two templates: "Therascreen® KRAS QC Locked Template" (for DNA sample evaluation) and "Therascreen® KRAS Locked Template" (for detection of KRAS mutations). These templates contain the PCR run parameters and generate the results. The same run parameters are used both for evaluation of DNA samples using the control reaction mix and for detection of KRAS mutations using the mutation reaction mix. The RGQ MDx instrument software supports the real-time analytical procedure. The software determines Ct values, calculates delta Ct values, and compares these to mutation-specific cutoff values built into the software as described above. A flag / warning system is built into the software to notify the user of potential problems with the analysis, indicating invalid test runs or invalid samples within a valid test run (inadequate levels of DNA or failure of the internal control). Results of invalid runs or valid samples are not reported. Users of the KRAS RGQ kit cannot inherently determine mutation status, as they cannot see Ct or delta Ct values, but only the mutation status calls reported by the software.
[0111] Interpretation of results The Ct of the control reaction reflects the total amount of amplifiable KRAS template in the sample, while the Ct of the allele-specific reaction reflects the amount of KRAS mutation in the sample. The difference in Ct values between the control and allele-specific reactions (ΔCt) indicates the proportion of mutations in the sample. The ΔCt value approaches 0 as the proportion of mutant DNA in the sample increases. The ΔCt value increases (approaching the threshold for positive vs. negative calls) as the proportion of mutant DNA in the sample decreases. If the ΔCt measurement exceeds the ΔCt cutoff value for the mutation reaction, the analysis reports "no mutations detected" (e.g., negative for 7 mutations). For each sample, calculations are performed by the RGQ MDx instrument software to determine the ΔCt value (FAM channel) for each of the seven mutation-specific reactions. [Mutation reaction Ct value] - [Control reaction Ct value] = ΔCt The Rotor-Gene Q software qualitatively determines the mutation status of DNA samples based on pre-set analytical Ct and ΔCt values and reports which samples contain which mutations. There are seven possible ΔCt values for each sample (one for each mutation). These values are compared to pre-set specifications (cut-off values) built into the RGQ MDx instrument software to determine whether the sample is mutation positive or negative, and if so, which mutation is present. If the ΔCt value of the mutation reaction is equal to or less than the cut-off value for that reaction, the sample is KRAS mutation positive. The analytical result is displayed as "Mutation Positive", "No Mutation Detected", "Invalid", or "Run Control Failed" if the run control failed. For mutation-positive samples, the specific mutation is reported.
[0112] [Table 13]
[0113] VI. ALTERNATIVE MEANS AND PROCEDURES There are several other alternatives for the treatment of colorectal cancer, including surgery, radiofrequency ablation, cryosurgery, chemotherapy, radiation therapy, and targeted therapy. Each option has its advantages and disadvantages. Patients should discuss these alternatives thoroughly with their doctors to choose the method that best suits their needs and lifestyle. There are no other FDA-cleared or approved alternative tests to detect KRA oncogene mutations in colorectal cancer tissue to select patients who may benefit from targeted therapy with Vectibix (panitumumab).
[0114] cobas® KRAS Mutation Test I. General information Generic name of device: Real-time PCR test Device name: cobas® KRAS Mutation Test Device Pro Code:OWD Applicant's Name and Address: Roche Molecular Systems, Inc. (RMS) 4300 Hacienda Drive Pleasanton, CA 94588-2722 Date of advisory recommendation: None Premarket Approval Application (PMA) Number: P140023 Approval Notice Date: May 7, 2015 Priority: Not applicable II. Indications for Use The cobas® KRAS Mutation Test for use on the cobas® 4800 System is a real-time PCR test for the detection of seven somatic mutations in codons 12 and 13 of the KRAS gene in DNA from formalin-fixed, paraffin-embedded human colorectal cancer (CRC) tumor tissue. The test is intended for use as an aid in identifying CRC patients for treatment with Erbitux® (cetuximab) or Vectibix® (panitumumab) based on the absence of a detected mutation. Specimens are processed using the cobas® DNA Sample Preparation Kit for manual sample preparation and the cobas z 480 Analyzer for automated amplification and detection. III. Contraindications There are no known contraindications to the use of this test. IV. WARNINGS AND PRECAUTIONS Warnings and precautions can be found in the cobas® KRAS Mutation Test product labeling. V. Device Description The cobas® KRAS Mutation Test consists of two reagent kits and a system platform. Details of the cobas® 4800 System platform are described below in the section "Instruments and Software." The reagent kit provides the reagents necessary to perform the two main steps of the test. 1. cobas® DNA Sample Preparation Kit provides reagents for manual specimen preparation to obtain genomic DNA from formalin-fixed, paraffin-embedded tissue (FFPET). 2. The cobas® KRAS Mutation Test Kit provides reagents for automated real-time PCR amplification and detection of KRAS mutations.
[0115] Sample preparation FFPET specimens are processed using the cobas® DNA Sample Preparation Kit, a manual specimen preparation method based on binding of nucleic acids to glass fibers to isolate genomic DNA. Deparaffinized 5-micrometer sections of FFPET specimens are incubated at high temperature with a lysis / binding buffer containing proteases and chaotropes to release nucleic acids and dissolve the released genomic DNA while protecting it from DNases. Isopropanol is then added to the lysis mixture, which is then centrifuged through a column with a glass fiber filter insert. During centrifugation, genomic DNA binds to the surface of the glass fiber filter. Unbound material, such as salts, proteins, and other cellular impurities, is removed by centrifugation. The adsorbed nucleic acids are washed and then eluted with an aqueous solution. The amount of genomic DNA is measured by spectrophotometer and adjusted to a fixed concentration of 2 nanograms / microliter. 25 microliters of the eluate containing 50 nanograms of genomic DNA is combined with 25 microliters of each activation master mix reagent of the cobas® KRAS Mutation Test Kit into a 96-well plate. After adding the controls and samples to the 96-well plate, the plate is transferred to the cobas z 480 analyzer for automated amplification and detection.
[0116] PCR amplification Target Selection and Amplification The cobas® KRAS Mutation Test Kit uses primers that define an 85 base pair sequence in exon 2 of human genomic DNA that includes KRAS codons 12 and 13. Only the region of the KRAS gene between the primers is amplified, not the entire KRAS gene. Table 14 below shows the intended target mutations.
[0117] [Table 14]
[0118] To amplify the target, a derivative of Thermus species Z05 DNA polymerase is used. First, the PCR reaction mixture is heated to denature the genomic DNA and expose the target sequences of the primers. When the mixture cools, the upstream and downstream primers anneal to the target DNA sequence. In the presence of divalent metal ions and excess dNTPs, Z05 DNA polymerase extends each annealed primer to synthesize a second DNA strand. This completes the first cycle of PCR, resulting in double-stranded DNA containing the 85 base pair region targeted by the KRAS gene. This process is repeated for several cycles, effectively doubling the amount of amplicon DNA with each cycle. The cobas® KRAS Mutation Test uses AmpErase (uracil-N-glycosylase) enzyme and deoxyuridine triphosphate (dUTP) to selectively amplify target nucleic acids from samples. The AmpErase enzyme catalyzes the destruction of DNA strands that contain deoxyuridine, but not thymidine. Deoxyuridine is not present in natural DNA, but is always present in the amplicon due to the use of dUTP instead of thymidine triphosphate as one of the nucleotide triphosphates in the reaction mix reagent. Thus, only the amplicon contains deoxyuridine. Deoxyuridine makes contaminated amplicons susceptible to destruction by the AmpErase enzyme before amplifying the target DNA. The AmpErase enzyme is inactive at temperatures above 55°C, and therefore does not destroy the target amplicon through the thermal cycling steps.
[0119] Automated Real-Time Mutation Detection The cobas z 480 analyzer measures the amount of fluorescence generated from a specific PCR product in real time. After amplification, each amplicon generated using the cobas® KRAS Mutation Test is subjected to a melting program (TaqMelt) that changes temperature from 40°C to 95°C. A wild-type specific probe binds to both wild-type and mutant amplicons at low temperatures. In the bound state, the fluorescein reporter dye at the 5' end of the probe is far enough away from the quencher dye at the 3' end that the fluorochrome can emit a specific wavelength of light. As the temperature increases, the probe dissociates from the amplicon and the quencher dye approaches the fluorochrome, decreasing the amount of measurable fluorescence. Amplicons that are perfectly matched with the probe (wild type) melt at a higher temperature than amplicons with one or more mismatches (mutants). The amount of fluorescence at each temperature increment is measured and the melting temperature is calculated. The presence of mutant KRAS sequences at codons 12 and 13 can be detected if the melting temperature is within a specific range. To avoid detection of silent mutations (no amino acid change) at codons 12 and 13, the modified bases act as universal bases, resulting in melting temperatures within the wild-type range.
[0120] Measuring instruments and software The cobas® 4800 System is controlled by the cobas® 4800 System SR2.1 Software, which provides the core software engine and user interface. The core system software is designed to allow multiple analyses to be run on the system using analyte-specific analytical packages (ASAPs). The cobas z 480 analyzer, a component of the test system, also contains its own instrument control software that is driven by the core software. All of these software components have been developed using design-controlled processes and associated software standards. A dedicated controller computer runs the cobas® 4800 SR2.1 system software and provides the interface to the cobas z 480 and the Laboratory Information System (LIS). The computer also processes the fluorescent signals in ASAP and stores the test results in a controlled database. The system allows the user to manually create test work orders for each specimen. A software wizard guides the user through the steps required for testing, including maintaining the cobas z 480, selecting the test, entering specimen ID, entering reagent and microwell plate barcodes, loading the microwell plate, and starting the test. The cobas® 4800 System tracks each specimen during processing and analysis on the cobas z 480 analyzer. Once a thermal run is complete, ASAP processes the fluorescence data using data analysis algorithms, evaluates the validity of controls, and determines results using assay-specific result interpretation logic. The software provides results to the user in three formats: a printable PDF result report, a Graphical User Interface (GUI)-based result viewer, and results export to an LIS. The cobas® 4800 System software includes validated KRAS data analysis algorithms to determine sample results and run validity.
[0121] Interpretation of results The melting temperature (Tm) and melting peak height (PH) are calculated by the analysis software and the values from all mutation control, negative control, and calibrator reactions are used to determine if the run is valid. If the run is valid, the analysis software evaluates the Tm and PH against acceptable limits to determine the validity and mutation status of the sample. Samples in which mutant Tms are observed are reported as "mutation detected" and the mutation reaction is reported (Table 15). Due to the number of possible mutations and the nature of the melting technique, the specific mutation within the codon is not specified. Samples with no observed mutant Tm are reported as "No Mutations Detected" (Table 15). Samples with invalid wells for the codon 12 / 13 reaction are reported as "Invalid." Samples with out-of-range Tm (neither wild-type nor mutant range) are reported as "Invalid." Valid samples have at least one melt peak (mutant, wild-type, or both). Samples with no melt peaks are invalid.
[0122] [Table 15]
[0123] Test Controls and Calibrators One KRAS mutant control (MC) and one KRAS negative control served as external run controls, and probes detecting wild-type codons 12 and 13 served as internal full process controls. 1. KRAS mutant control: The mutant control was a mixture of a double mutant linearized DNA plasmid and genomic DNA of a wild-type cell line. The plasmid contained mutant sequences at codon 12 (Asp, GAT) of KRAS and codon 61 (His, CAC) of KRAS. Mutational controls are included in every run and serve as process controls for all steps except sample preparation. Mutational control reactions must have melting temperatures for KRAS wild type and KRAS codon 12 / 13 mutants within their respective acceptance ranges for the run to be considered valid. 2. KRAS Negative Control: The negative control is a full process control to check for possible contamination of the cobas® DNA Sample Preparation Kit and the cobas® KRAS Mutation Kit reagents or steps. The melt peak height value must be below a pre-defined cut-off value for the run to be considered valid. No reagents are provided for the negative control. Use DNA Sample Diluent (DNA SD) as the negative control. 3. KRAS Calibrator: The KRAS calibrator consists of wild-type genomic DNA and serves as a melting temperature (Tm) calibrator to correct for run-to-run and instrument-to-instrument temperature variations. The wild-type peak Tm is used by the analysis software to adjust the Tm values of mutant controls and all samples prior to analysis of mutation status.
[0124] VI. ALTERNATIVE MEANS AND PROCEDURES Currently, there is one FDA-approved alternative for testing the KRAS mutation status of formalin-fixed, paraffin-embedded CRC tissue to select patients eligible for treatment with cetuximab (Erbitux) or panitumumab (Vectibix): the QIAGEN therascreen KRAS RGQ PCR kit, approved as PMA P110030 and P110027.
[0125] FoundationOne CDx® I. General information Generic name of device: Next-generation sequencing-based oncology panel, somatic or germline variant detection system Device name: FoundationOne CDx (registered trademark) Device Pro Code: PQP Applicant's name and address: Foundation Medicine, Inc. 150 Second Street Cambridge, MA 02141 Date of advisory recommendation: None Premarket Approval Application (PMA) Number: P170019 FDA Notice of Approval Date: November 30, 2017 Breakthrough Devices: As of June 15, 2016, a device has been granted approved breakthrough device status (formerly known as the Expedited Access Pathway (EAP)) because (1) it is intended to diagnose a life-threatening or irreversibly debilitating disease or condition, (2) it represents a breakthrough technology that provides a clinically meaningful advantage over existing legally marketed technologies, and (3) access to the device is in the best interest of the patient.
[0126] II. Indications for Use FoundationOne CDx® (F1CDx) is a next-generation sequencing-based in vitro diagnostic that detects genomic signatures, including substitution, insertion, and deletion alterations (indels) and copy number alterations (CNAs) in 324 genes, as well as specific gene rearrangements, microsatellite instability (MSI), and tumor mutation burden (TMB), using DNA isolated from formalin-fixed paraffin-embedded (FFPE) tumor tissue specimens. The test is intended as a companion diagnostic to identify patients who may benefit from treatment with targeted therapeutic agents listed in Table 16, based on the approved therapeutic drug labeling. F1CDx is also intended to provide tumor mutation profiling for use by qualified healthcare professionals in accordance with professional oncology guidelines for patients with solid malignant neoplasms. The F1CDx test is a single-site assay performed at Foundation Medicine.
[0127] [Table 16]
[0128] III. Contraindications There are no known contraindications. IV. Warnings / Precautions and Restrictions Warnings / precautions and limitations are available on the FoundationOne CDx assay labeling. V. Device Description FoundationOne CDx (F1CDx) is a single-site assay performed at Foundation Medicine. The assay includes reagents, software, instruments, and procedures for testing DNA extracted from formalin-fixed, paraffin-embedded (FFPE) tumor specimens. The assay employs a single DNA extraction method from routine FFPE biopsy or surgical resection specimens, and 50–1000 nanograms of DNA are subjected to whole-genome shotgun library construction and hybridization-based capture of all coding exons of 309 cancer-related genes, one promoter region, one noncoding RNA (ncRNA), and selected intronic regions of 34 commonly rearranged genes, 21 of which also contain coding exons (see Tables 17 and 18 below for a complete list of genes included in F1CDx). Thus, a total of 324 genetic alterations are detected by the assay. Hybrid capture selected libraries are sequenced to high uniform depth using the Illumina® Hi Seq 4000 platform (targeting a median coverage of 500x or greater, with 99% or greater coverage of exons at 100x or greater). Sequence data are processed using a customized Analysis Pipeline designed to detect all classes of genomic alterations, including base substitutions, indels, copy number alterations (amplifications and homozygous deletions), and specific genomic rearrangements (e.g. gene fusions). Additionally, genomic signatures such as microsatellite instability (MSI) and tumor mutation burden (TMB) are also reported.
[0129] Genes with full-length exon coding regions included in F1CD to detect substitutions, insertion deletions (indels), and copy number alterations (CNAs) [Table 17-1] [Table 17-2]
[0130] [Table 18]
[0131] Test results Results of the study include: Category 1: CDx claims listed in Table 16 of the Intended Use Category 2: Cancer mutations with confirmed clinical significance Category 3: Cancer mutations expected to have clinical significance Genomic findings other than those listed in Table 16 of the intended use statement (i.e., categories 2 and 3) are not prescriptive or conclusive for the label use of a particular therapeutic product. Test Kit Contents This test includes a sample shipping kit that will be sent to the ordering laboratory. The shipping kit contains the following components: Sample preparation procedure Delivery method Return label device The F1CDx analysis is intended to be performed on serial number controlled instruments as shown in Table 19 below. All instruments are certified by Foundation Medicines, Inc. (FMI) under the FM1 quality system.
[0132] [Table 19]
[0133] Testing process All analytical reagents involved in the F1CDx analytical process are certified by FMI and comply with the Quality System Regulation (QSR) for medical devices. A. Specimen Collection and Preparation Formalin-fixed, paraffin-embedded (FFPE) tumor specimens are collected and prepared according to standard pathology techniques. FFPE specimens can be received as unstained slides or as FFPE blocks. Prior to initiating analysis, hematoxylin and eosin (H&E) stained slides are prepared and reviewed by a qualified pathologist to confirm disease ontology and ensure there is sufficient tissue (0.6 m3), tumor content (≥ 20% tumor), and sufficient nucleated cells to perform the analysis. B.DNA extraction Specimens that pass pathology are queued for DNA extraction and subsequent cell lysis from FFPE tissue by digestion with Proteinase K buffer followed by automated purification using a 96-well KingFisher™ FLEX magnetic particle processor. After DNA extraction, double-stranded DNA (dsDNA) is quantified using the provided lambda DNA standard (Invitrogen) by Quant-iT™ PicoGreen® fluorometry prior to library construction (LC). A minimum of 55 nanograms of genomic DNA must be obtained from each sample to ensure sufficient DNA for quality control (QC) and to proceed with LC. C. Library Construction Library construction (LC) begins with normalization of DNA to 50-1000 nanograms. Normalized DNA samples are randomly sheared (fragmented) to approximately 200 base pairs by adaptive focused acoustic sonication using a Covaris LE220, then purified using 1.8x AMPure® XP Beads (Agencourt®). Library construction, including solid-phase reversible immobilization (SPRI) purification followed by end repair, dA addition, and ligation mix using NEBNext® reagents (NEB's custom fill kit), is performed in a 96-well plate (Eppendorf) on a Bravo Benchbot (Agilent) with a "with beads" protocol to maximize reproducibility and library yield. Indexed (6 base pair barcode) sequencing libraries are subjected to 10 cycles of PCR amplification on a HiFi™ (Kapa) followed by 1.8x SPRI purification. Purification and dilution for QC are performed. Following LC, a QC procedure is performed by quantifying single-stranded DNA (ssDNA) of the purified libraries using the Quant-iT™ OliGreen® ssDNA Analysis Kit (Life Technologies) on a Molecular Devices Multimode Spectra Max M2 plate reader. Libraries with poor sequencing yields are rejected.
[0134] D. Hybrid Capture Hybrid Capture (HC) begins with normalization of each library to 500-2000 nanograms. The normalized samples are then subjected to solution hybridization using a pool of individually synthesized 5' biotinylated DNA 120 base pair oligonucleotides at a molar ratio of 50x or greater. The baits cover approximately 1.8 megabases of the human genome, including all coding exons of 309 cancer-related genes, intronic or non-coding regions of 35 genes, and over 3,500 single nucleotide polymorphisms (SNPs) present throughout the genome. Baits are designed with overlapping 120 base pair DNA sequence intervals covering the exons (60 base pair overlap) and introns (20 base pair overlap) of the targets, with a minimum of three baits per target. Intronic baits are filtered for repetitive elements as defined by the UCSC Genome RepeatMasker track. After hybridization, library-bait duplexes are captured onto paramagnetic MyOne™ streptavidin beads (Invitrogen) and non-target material is removed by washing once with 1× SSC at 25° C. and four times with 0.25× SSC at 55° C. PCR master mix is added and the captured library is amplified (12 cycles) directly from the washed beads. 3 After 12 cycles of amplification, samples are 1.8× SPRI purified. Purification and dilutions for QC are performed. Quality control of the Hybrid Capture is performed by measuring dsDNA yield using the Quant-iT™ PicoGreen® dsDNA Analysis Kit (Life Technologies) on a Molecular Devices Multimode SpectraMax M2 plate reader. Fewer than 140 nanograms of sequencing library is considered a failure. E. Sequencing Sequencing is performed using off-board clustering on an Illumina cBot employing patterned flow cell technology to generate monoclonal clusters from a single DNA template, followed by sequencing by sequential synthesis (SBS) chemistry on an Illumina HiSeq 4000. Fluorescently labeled 3'-blocked dNTPs and polymerase are loaded into the flow cell to generate a growing nucleotide chain, which is excited by a laser. A camera captures the emitted light color of the incorporated base, which is then cleaved. The terminator is then removed, restoring the nucleotide to its natural form and allowing the polymerase to add another base to the growing chain. With each new sequencing cycle, a new pool of fluorescently labeled 3'-blocked dNTPs is added. With each new cycle, the color changes as each new base is added to the growing chain. With this method, millions of clonal copies of DNA from individual clusters can be sequenced in parallel.
[0135] F. Sequence Analysis Proprietary software developed by FMI was used to analyze the sequence data. Sequence data were mapped to the human genome (hg19) using Burrows-Wheeler Aligner (BWA) v0.5.9. Removal of PCR duplicate reads and collection of sequence metrics were performed using Picard 1.47 (http: / / picard.sourceforge.net) and SAMtools 0.1.12a. Local alignment optimization was performed using Genome Analysis Toolkit (GATK) 1.0.4705. Variant calling was performed only in the genomic regions of interest. Base substitution detection is performed using a Bayesian approach, incorporating tissue-specific prior expectations to detect novel somatic alterations at low mutant allele frequencies (MAF) and increase sensitivity to alterations at hotspot sites. Reads with poor mapping quality (mapping quality < 25) or poor base calling quality (base calling quality ≤ 2) are discarded. Final selection is made at MAF ≥ 5% (MAF ≥ 1% for hotspots). To detect indels, carry out de novo local assembly of each targeted exon using the de Brown method. The major steps are as follows: Collect all read pairs where at least one read maps to the target region. Decompose each read into its constituent k-mers and build an enumerable graph representation (de Brown) of all non-reference haplotype candidates present. · Evaluate the support of each alternative haplotype on the raw read data to generate variant candidates. All reads are compared to each haplotype candidate by ungapped alignment, and a read "vote" is assigned to the best matching candidate for each read. Connections between candidates are revealed by dividing the lead votes, weighted by the number of reads that already support each haplotype. This process is repeated until a "winning" haplotype is selected. Align candidates to the reference genome and report variant calls. Filtering of indel candidates is performed similarly to base substitutions, using empirically increasing thresholds of allele frequency in the repeat region and quality metrics of flanking sequences as implemented in GA TK: flanking mismatch percentage < 25%, average quality of flanking bases > 25, average number of mismatches in supporting reads ≤ 2. Finally, indels are judged to be acceptable if MAF ≥ 5% (MAF ≥ 3% for hotspots). Copy number alterations (CNAs) are detected in a manner similar to comparative genomic hybridization (CGH). First, the sequence coverage obtained at all exons and genome-wide SNPs (approximately 3,500) is normalized to a process-matched normal control to obtain a log ratio profile of the sample. This profile is segmented and interpreted using the allele frequencies of the sequenced SNPs to estimate the tumor purity and copy number in each segment. In samples with tumor purity of 20% or more, amplification is confirmed in segments with 6 or more copies (7 or more copies in triploids and 8 or more copies in tetraploids) and homozygous deletion is confirmed in 0 copies. ERBB2 amplification is called positive in segments with 5 or more copies in diploid tumors. Genomic rearrangements are identified by analyzing chimeric read pairs, defined as read pairs whose reads map to separate chromosomes or are separated by more than 10 megabases (Mb). Pairs are clustered by their genomic coordinates, and clusters containing at least five chimeric pairs [three in the case of known fusions] are identified as rearrangement candidates. Candidates are filtered by mapping quality (average read mapping quality within a cluster must be ≥ 30) and distribution of alignment positions. Rearrangements are annotated with predicted function (e.g., generation of a fusion gene).
[0136] To determine microsatellite instability (MSI) status, length variation of 95 intronic homopolymer repeat loci (10-20 base pairs long in the human reference genome) with sufficient coverage in the F1CDx analysis was analyzed and summarized into an overall MSI score by principal component analysis. Using the 95 loci, the repeat length of each read spanning the locus is calculated for each sample. The mean and variance of the repeat lengths are recorded. Principal component analysis (PCA) is used to project the 190 dimensions of data onto the one dimension (first principal component) that maximizes the separation of the data and calculate an MSI score. Each sample is assigned a qualitative status of MSI-high (MSI-H) or MSI-stable (MSS), and a range of MSI scores are assigned to MSI-H or MSS by manual unsupervised clustering. Samples with low coverage (<250x median) are assigned a status of MSI-unknown. Tumor mutation burden (TMB) is measured by counting all synonymous and nonsynonymous variants present at an allele frequency of 5% or more and filtering potential germline polymorphisms based on public databases of known germline polymorphisms, such as the Single Nucleotide Polymorphism Database (dbSNP) or the Exome Aggregation Consortium (ExAC). Any further germline alterations still present after interrogation of the database are evaluated for potential germline status and filtered using a somatic-germline / zygosity (SGZ) algorithm. Furthermore, known likely driver mutations are filtered out to unbias the dataset. The resulting mutation count is then divided by the coding region corresponding to the total mutation counted, i.e., 793 kilobases. The resulting number is reported as mutations per megabase unit (Mutations / Megabase). After completion of the analysis pipeline, variant data are displayed in FMI's proprietary CATi software application along with sequence quality control metrics. As part of the data analysis QC for each sample, the F1CDx assay uses a SNP profile algorithm to assess cross-contamination, reducing the risk of false positive calls that may occur as a result of unanticipated contamination. Sequence data are reviewed by bioinformatics-trained personnel. Samples that do not meet the QC criteria are automatically held and not released.
[0137] G. Report Writing Approved results are annotated with CDx-related information by automated software and integrated with patient demographics and additional information provided by FMI as a professional service prior to approval and release by the laboratory director or designee. H. System-related internal process control Positive control Each analysis run includes duplicate runs of control samples. The control samples comprise a pool of 10 HapMap cell lines and are used as positive mutation detection controls. 100 germline SNPs present throughout the region of interest are required for the analysis pipeline to detect. If no SNPs are detected as expected, QC is failed due to potential processing errors. Sensitivity Control The HapMap control pool used as a positive control was prepared to contain 5%–10% of the MAF variants that must be detected by the analysis pipeline to ensure the expected sensitivity in each run. Negative controls Samples are molecularly barcoded at the LC stage. Only reads with a perfect molecular barcode sequence are included in the analysis. The analysis pipeline includes an algorithm that analyzes the SNP profile of each specimen to identify any contamination that may have occurred prior to molecular barcoding, allowing detection of contamination below 1%.
[0138] VI. ALTERNATIVE MEANS AND PROCEDURES For detection of genetic alterations using FFPE tumor specimens, FDA-approved companion diagnostic (CDx) alternatives exist as described in Table 16 of the F1CDx Intended Use Statement. Approved CDx tests are listed below in Table 20 and for more information, see the FDA list of cleared or approved companion diagnostics (https: / / www.fda.gov / MedicalDevices / ProductsandMedicalProcedures / InVitroDiagnostics / ucm301431.htm?source=govdelivery).
[0139] [Table 20] TIFF0007597450000032.tif164166
[0140] VII. Marketing History Foundation Medicine originally designed and developed the FoundationOne® Laboratory Developed Test (F1 LDT), and the first commercial samples were tested in 2012. The F1 LDT is used to detect the presence of genomic alterations in FFPE tumor tissue specimens. The F1 LDT is not FDA cleared or approved. The F1CDx assay is not commercially available in the United States or any other country.
[0141] therascreen® KRAS RGQ PCR Kit (2012) I. General information Generic name of device: Real-time PCR test Device name: therascreen® KRAS RGQ PCR Kit Device Pro Code:OWD Applicant's name and address: QIAGEN Manchester Ltd Skelton House, Lloyd Street North Manchester, UK M15 6SH Date of advisory recommendation: None Premarket Approval Application (PMA) Number: P110030 FDA Notice of Approval Date: July 6, 2012 Priority: Not applicable II. Indications for Use The therascreen KRAS RGQ PCR kit is a real-time qualitative PCR assay used on the Rotor-Gene Q MDx instrument to detect seven somatic mutations in the human KRAS oncogene using DNA extracted from formalin-fixed, paraffin-embedded (FFPE) colorectal cancer (CRC) tissues. The therascreen KRAS RGQ PCR kit is intended to help identify CRC patients for treatment with Erbitux® (cetuximab) based on a test result that shows no detectable KRAS mutations. III. Contraindications none. IV. WARNINGS AND PRECAUTIONS Warnings and precautions are provided on the Therascreen® KRAS RGQ PCR Kit label. V. Device Description The elements that make up the entire device are as follows: QIAGEN QIAamp® DSP DNA FFPE Tissue Kit QIAGEN therascreen® KRAS RGQ PCR Kit QIAGEN Rotor-Gene Q MDx, software version 2.1.0, and KRAS assay package
[0142] Sample preparation Formalin-fixed, paraffin-embedded (FFPE) blocks are sectioned onto glass slides. Stained slides are used to confirm that the tumor content is greater than 20% of the tissue and that there is a minimum tumor area of 4 square millimeters. One unstained tissue section is scraped off the slide for DNA extraction. Sections with less than 20% tumor content are subjected to macrodissection. DNA is manually extracted and purified from 5 micrometer glass-mounted sections of FFPE tissue from colorectal cancer patients using the QIAGEN QIAamp® DSP DNA FFPE Tissue Kit and a modified protocol. Tumor tissue is deparaffinized with xylene, which is then extracted with ethanol. Samples are lysed under denaturing conditions with proteinase K for 1 hour. Samples are heated at 90°C to reverse the formalin crosslinks of the genomic DNA. Samples are passed through a silica-based membrane, which binds the genomic DNA to the membrane and removes contaminants. The purified genomic DNA is eluted from the membrane in 200 microliters of elution buffer. The extracted DNA is stored at -20°C.
[0143] PCR amplification and detection The QIAGEN therascreen® KRAS RGQ PCR Kit contains reagents for eight separate reactions: seven mutation-specific reactions that amplify and detect mutations in codons 12 and 13 of exon 2 of the K-Ras oncogene, and one control reaction that amplifies and detects a region in exon 4 of the K-Ras oncogene. Each reaction in the KRAS RGQ Kit uses ARMS® (Amplification Refractory Mutation System) allele-specific polymerase chain reaction (PCR) to selectively amplify mutated genomic DNA templates (mutation positive) against a background of non-mutated genomic DNA (mutation negative, wild type), and detects the resulting amplification products in combination with fluorescently labeled Scorpion® primers. ARMS technology exploits the ability of Taq polymerase to discriminate between matches and mismatches at the 3' end of the PCR primer. Scorpion is a bifunctional molecule that covalently links a PCR primer and a probe. The probe incorporates both a fluorophore, carboxyfluorescein (FAM™), and a quencher that quenches the fluorescence of the fluorophore. During PCR, when the probe binds to the ARMS amplicon, the fluorophore and quencher separate, resulting in a detectable increase in fluorescence. Prior to testing in the mutation-specific test reactions, each DNA sample should be tested in a control reaction to determine whether the quality and quantity of DNA is sufficient and appropriate for the working range of the assay. The Ct value of the control reaction is used to assess the total amount of amplifiable DNA in the sample and should be within the prespecified range for each sample. The interpretation of the results obtained in the control reactions is as follows.
[0144] Table 21. Interpretation of results obtained with control reactions [Table 21]
[0145] The run parameters used to evaluate DNA samples using the control reaction mix were the same as those used for mutation analysis using the mutation reaction mix. The run parameters were as follows: (1) Hold at 95°C for 15 min to activate Taq polymerase; (2) Run 40 cycles of PCR with denaturation at 95°C for 30 s and annealing / extension at 60°C for 1 min. The PCR cycle at which the fluorescence from a particular reaction crosses a predefined threshold is defined as the Ct value. The seven mutations in codons 12 and 13 of the K-RAS oncogene detected by this kit are shown below.
[0146] Table 22. Seven mutations in codons 12 and 13 of the K-RAS oncogene detected by the kit [Table 22]
[0147] Test Control Each test run must include an internal control, a positive control, and a negative control. If the negative control shows signs of contamination (Ct value in the FAM channel exceeds a set value) or if the positive control Ct value is outside the set range (both FAM and HEX channels), the test run is considered invalid.
[0148] [Table 23]
[0149] Internal Control: Eight reactions contain an additional ARMS primer and a HEX-labeled Scorpion primer for amplification and detection of a synthetic non-K-Ras-related oligonucleotide template used as an internal control. The Scorpion primer is HEX-labeled to distinguish it from the FAM-labeled Scorpion in the control and mutation reactions. In each reaction, the internal control reaction is designed to be the weaker of the two reactions. This is achieved by using a very low concentration of internal control template. The internal control reaction is designed to work independently of the mutation-specific amplification, but may fail if there is strong amplification because it is "competed" by the FAM reaction. Mutation-negative results in which any one of the seven mutation reactions fails the internal control reaction are reported as invalid results. The internal control is used to detect inhibitors or failure of the gross reaction. Positive control: The positive controls consist of a mixture of synthetic oligonucleotides representing each of the mutations detected by the KRAS Kit. Detection of the positive controls ensures that each reaction mix in the kit is functioning properly. Negative control: The KRAS RGQ kit includes nucleic acid-free water for use as a no-template control (NTC) reaction. The NTC serves as a negative control to assess potential contamination during assay setup.
[0150] Equipment and Software The Rotor-Gene Q (RGQ) MDx instrument is a real-time PCR analyzer designed for thermal cycling and real-time detection of amplified DNA. The RGQ MDx instrument is equipped with software to control and monitor the PCR reaction and determine the mutation status based on the PCR results. It employs a centrifugal rotor design for thermal cycling during the PCR reaction, where each tube rotates in an air-flowing chamber. Samples are heated and cooled in a low-mass air oven according to cycles determined by the software to initiate different phases of the PCR cycle, for a total of 40 cycles in each PCR run. In the RGQ MDx instrument, samples are excited from the bottom of the chamber by a light-emitting diode. Energy is transferred through a thin wall at the bottom of the tube. The emitted fluorescence passes through an emission filter on the side of the chamber and is detected by a photomultiplier tube. Detection is performed as each tube is aligned with the detection optics, and the tube rotates past the excitation / detection optics every 150 milliseconds. The fluorescent signal monitors the progress of the PCR reaction. The instrument supports up to six optical channels (six excitation light sources and six detection filters), but the KRAS kit uses only two of these channels (the FAM channel and the HEX channel). The therascreen KRAS analysis package consists of two templates: "therascreen KRAS QC Locked Template" (for DNA sample evaluation) and "therascreen KRAS Locked Template" (for detection of KRAS mutations). These templates contain the PCR run parameters and generate the results. The same run parameters are used both for evaluation of DNA samples using the control reaction mix and for detection of KRAS mutations using the mutation reaction mix. The RGQ MDx instrument software supports the real-time analytical procedure. The software determines Ct values, calculates ΔCt values, and compares these to mutation-specific cutoff values built into the software as described above. A flag / warning system is built into the software to notify the user of potential problems with the analysis, indicating invalid test runs or invalid samples within a valid test run (inadequate levels of DNA or failure of the internal control). Results of invalid runs or valid samples are not reported. Users of the KRAS RGQ kit cannot subjectively judge mutation status because they cannot see Ct or ΔCt values, but only the mutation status call reported by the software.
[0151] Interpretation of results The Ct of the control reaction reflects the total amount of amplifiable K-Ras template in the sample, while the Ct of the allele-specific reaction reflects the amount of K-Ras mutation in the sample. The difference between the Ct values of the control and allele-specific reactions (ΔCt) indicates the proportion of mutations in the sample. The ΔCt value approaches 0 as the proportion of mutant DNA in the sample increases. The ΔCt value increases (approaching the positive and negative call thresholds) as the proportion of mutant DNA in the sample decreases. If the ΔCt measurement exceeds the ΔCt cutoff value for the mutant reaction, the analysis reports "no mutations detected" (e.g., negative for 7 mutations). For each sample, calculations are performed by the RGQ MDx instrument software to determine the ΔCt value (FAM channel) for each of the seven mutation-specific reactions. [Mutation reaction Ct value] - [Control reaction Ct value] = ΔCt The Rotor-Gene Q software qualitatively determines the mutation status of DNA samples based on pre-set analytical Ct and ΔCt values and reports which samples contain which mutations. There are seven possible ΔCt values for each sample (one for each mutation). These values are compared to pre-set specifications (cut-off values) built into the RGQ MDx instrument software to determine whether the sample is mutation positive or negative, and if so, which mutation is present. If the ΔCt value of the mutation reaction is equal to or less than the cut-off value for that reaction, the sample is K-Ras mutation positive. The analytical result is displayed as "Mutation Positive", "No Mutation Detected", "Invalid", or "Run Control Failed" if the run control failed. For mutation-positive samples, the specific mutation is reported.
[0152] [Table 24]
[0153] VI. ALTERNATIVE MEANS AND PROCEDURES There are no other FDA-cleared or approved alternative tests to detect K-Ras oncogene mutations in colorectal cancer tissue to select patients for benefit from Erbitux® (cetuximab) therapy. EXAMPLES
[0154] Determination of high expression status of αvβ6 integrin 4. Method 4.1 Immunohistochemistry Immunohistochemistry of FFPE tissues was performed with antibodies against integrins αvβ5, αvβ3, αv, αvβ6, αvβ8, and β3, as well as vitronectin, osteopontin, Ki67, and CD31. All anti-integrin antibodies and associated staining protocols were provided by Merck Serono. The protocols were further adapted to the staining equipment in the Indivumed laboratory. Immunohistochemistry protocols for the detection of vitronectin, osteopontin, Ki67, and CD31 were previously established at Indivumed and approved by Merck Serono. As quality control, IHC was performed on cell lines and tissues in each run (run controls). In addition, isotype controls were included in all run controls. For IHC staining, FFPE tissues were provided by Merck Serono / Covance. FFPE positive control samples (cell lines or tissues) used as run controls and isotype controls were sliced into 3-micrometer sections and mounted on positively charged Super Frost® Ultra Plus glass slides (Rohto, Karlsruhe). IHC was performed on a Discovery® XT stainer (Roche / Varian Medical Systems). FFPE slides were deparaffinized in the stainer, and immunostaining was performed on the Discovery® XT using the ChromoMap detection kit (Roche Diagnostics Deutschland GmbH). Detailed staining methods are described, for example, below. Goodman SL, Grote HJ, Wilm C. Matched rabbit monoclonal antibodies against αv-series integrins reveal a novel αvβ3-LIBS epitope, and permit routine staining of archival paraffin samples of human tumors. Biol Open 2012; 1: 329-340. Slides were then manually washed in hot water with detergent and finally washed in tap water only and dH2O. For dehydration, slides were transferred to an ascending ethanol series (2 × 80%, 2 × 96%, 2 × abs. EtOH) and incubated for 1–3 min each. After dehydration, slides were transferred to xylene (3 × 2 min) and finally embedded automatically in Pertex.
[0155] 4.1.1 Anti-integrin αvβ6 4.1.1.1 Anti-integrin αvβ6 antibodies and isotype controls [Table 25]
[0156] 4.2. Automated Procedures / Protocols Program Steps (DiscoveryXT): Procedure: Res IHC Omni-UltraMap HRP XT (Protocol Overview) Discovery XT Staining Module Indivumed, Falkenried 88, 20251 Hamburg Protocol Number 307 Protocol name: A-avb6(107) Created on: October 5, 2013 1 Tissue sample [selection] 2 Paraffin [Selection] 3. Deparaffinization [optional] 4 Enzymes [Selection] 5 Add 1 drop of PROTEASE2 (enzyme), attach a cover slip, and incubate for 12 minutes. 6 Antibodies [Selection] 7 Antibody Auto Dispensing [Selection] 8 Standard Ab Incubation (optional) 9 Add 1 drop of Antibody 23 (antibody) and incubate for 32 minutes. Add one drop of 10 OMap anti-Rb HRP (Multimer HRP), attach a coverslip, and incubate for 16 minutes. 11 Counterstain [Selection] 12 Standard [Select] 13 Add 1 drop of HEMATOXYLIN II (counterstain), attach a coverslip, and incubate for 8 minutes. 14 Post Counterstain [Selection] Add 1 drop of 15 BLUING reagent (post-counterstain), attach a coverslip, and incubate for 4 minutes. 16 Slide Washing [Optional]
[0157] 4.2. Histopathological evaluation Immunohistochemically stained FFPE samples were evaluated by pathologists at Indivumed. Typically, pathologists quantify the predominant staining intensity, identify the staining pattern, and estimate the percentage of positively stained tumor tissue. H&E stained sections were used to confirm the tumor volume as well as the type of tissue. The scoring system for semiquantitative evaluation was as follows: 1) 0.05% ...
[0158] 4.2.1 Histoscore (H-score): Evaluation of tumor cells To semi-quantitatively evaluate the immunohistochemically stained tumor tissue, H-score classification was applied. McCarty Jr KS, Miller LS, Cox EB, Konrath J, McCarty Sr KS “Estrogen receptor analyses: Correlation of biochemical and immunohistochemical methods using monoclonal antireceptor antibodies”. Arch Pathol Lab Med 109: 716-721 (1985), the disclosures of which are preferably incorporated herein by reference in their entirety. Thus, negative (0), weakly stained (1), moderately stained (2), and strongly stained (3) areas are estimated as percentages of tumor tissue. Then, the H-score is calculated as follows: H score = (weak)% + (medium)% x 2 + (strong)% x 3 [Table 26] A HistoScore of >70 thus obtained has preferably been proven to be an appropriate threshold for fulfilling the criterion "high expression of αvβ6 integrin" in avituzumab treatment.
Claims
1. A pharmaceutical product comprising avituzumab for use in the treatment of left-sided colon cancer in a human, wherein the left-sided colon cancer has high expression of αvβ6 integrin, and wherein the human is also receiving a chemotherapy agent comprising cetuximab and irinotecan.
2. The pharmaceutical composition of claim 1 , wherein the colon cancer is stage II, stage III, or stage IV colon cancer.
3. The pharmaceutical composition according to claim 1 or 2, wherein the colon cancer is left-sided metastatic colon cancer.
4. The pharmaceutical agent according to any one of claims 1 to 3, wherein the left-sided colon cancer is RAS wild-type or KRAS wild-type left-sided colon cancer.
5. The pharmaceutical product according to any one of claims 1 to 4, characterized in that the left-sided colon cancer is stage III or stage IV RAS wild-type and / or KRAS wild-type left-sided colon cancer, or RAS wild-type and / or KRAS wild-type left-sided metastatic colon cancer.
6. The pharmaceutical product of any one of claims 1 to 5, wherein a human receives cetuximab simultaneously with avituzumab.
7. The pharmaceutical product of any one of claims 1 to 6, wherein the chemotherapeutic agent further comprises one or more compounds selected from the group consisting of fluorouracil, tegafur / uracil (UFT), folinic acid, oxaliplatin, aflibercept, regorafenib, and capecitabine, and salts and solvates thereof.
8. The method of any one of claims 1 to 7, wherein the chemotherapeutic agent is administered according to the FOLFIRI protocol.
9. The chemotherapy agent further one or more compounds selected from fluorouracil (5-FU), and folinic acid (leucovorin), and salts and solvates thereof; The pharmaceutical product according to any one of claims 1 to 8, comprising:
10. 10. The pharmaceutical product of any one of claims 1 to 9, wherein avituzumab is administered to a human being in an amount of 375 mg to 750 mg per week, in an amount of 750 mg to 1500 mg every two weeks, or in an amount of 1500 mg to 3000 mg per month.
Citation Information
Patent Citations
Methods of treating solid tumors and / or metastases thereof, agents therefor, and methods of predicting clinical outcomes of treating solid tumors and / or metastases thereof
JP2017535516A
