Germplasm resource data management system

Abstract

The application is suitable for the technical field of germplasm resources, and provides a germplasm resource data management system.The system comprises: an approval and registration sample management system, a resource survey collection management system, a germplasm resource library position management system, a germplasm resource phenotype database and a germplasm resource genotype database, the approval and registration sample management system manages data of crop standard samples; the germplasm resource phenotype database stores phenotype data of crop germplasm resources; the germplasm resource genotype database stores genotype data of crop germplasm resources; the germplasm resource library position management system manages data of crop germplasm resources; the phenotype data of crop germplasm resources, the genotype data of crop germplasm resources and the data of crop germplasm resources are corresponded through library number coding.The application can scientifically manage crop germplasm resource data, and can also realize internet sharing of crop germplasm resource data.

Description

TECHNICAL FIELD

[0001] The application belongs to the technical field of germplasm resources, and particularly relates to a germplasm resource data management system. BACKGROUND

[0002] The agricultural biological resource preservation center is used for preserving crop germplasm resources, and is provided with seed preservation, in vitro preservation and ultralow-temperature preservation facilities. The seed preservation facilities include long-term libraries, medium-term libraries and short-term libraries, and cover main crop local variety resources, and have successively provided more than 10,000 copies of resources for scientific research, teaching units such as breeding, plant protection and biotechnology in the region, and provided resource guarantee for the development and innovation ability of the agricultural scientific research in the region.

[0003] With the increase of the preservation amount of the germplasm resources in the center and the external service amount, it is urgently needed to develop a crop germplasm resource data management system to guarantee the scientific management of the germplasm resources and realize the internet sharing of the crop germplasm resource information. SUMMARY

[0004] In order to overcome the problems in the related art, the application embodiments provide a germplasm resource data management system.

[0005] The application is realized through the following technical solutions:

[0006] The application embodiments provide a germplasm resource data management system, which comprises an approved registration sample management system, a germplasm resource library position management system, a germplasm resource phenotype database and a germplasm resource genotype database, and the approved registration sample management system, the resource survey collection management system, the germplasm resource phenotype database and the germplasm resource genotype database are respectively in communication connection with the germplasm resource library position management system;

[0007] The approved registration sample management system is used for managing the data of the crop standard sample; the germplasm resource phenotype database is used for storing the phenotype data of the crop germplasm resource; the germplasm resource genotype database is used for storing the genotype data of the crop germplasm resource; the germplasm resource library position management system is used for managing the data of the crop germplasm resource, and the data of the crop germplasm resource comprises the library position, the breeding information, the inventory quantity and the germplasm vigor of the germplasm resource; and the resource survey collection management system is used for surveying and collecting the germplasm resource

[0008] The data of the crop germplasm resource comprises the data of the part of the standard sample in the crop germplasm resource, and the phenotype data of the crop germplasm resource, the genotype data of the crop germplasm resource and the data of the crop germplasm resource are corresponded through library number coding.

[0009] In some embodiments, the standard sample management system is specifically configured to: acquire a standard sample registration request, detect seed viability of the standard sample; generate a library number code for the standard sample after the seed viability of the standard sample meets preset requirements; and store the standard sample in a library based on the library number code.

[0010] In some embodiments, the standard sample management system is further configured to: perform out-of-stock processing on the corresponding standard sample after detecting a variety standard sample extraction request; and convert the corresponding standard sample into germplasm resources and send corresponding data to a germplasm resource library management system to enable the germplasm resource library management system to store the germplasm resources based on the library number code, after failing to detect a variety standard sample extraction request.

[0011] In some embodiments, the germplasm resource library management system is specifically configured to: acquire a germplasm resource storage request, detect seed viability of the germplasm resource; generate a library number code for the germplasm resource after the seed viability of the germplasm resource meets preset requirements; and store the germplasm resource in a library based on the library number code.

[0012] In some embodiments, the germplasm resource library management system is further configured to: perform out-of-stock processing on the corresponding germplasm resource after detecting a germplasm resource out-of-stock request; and detect seed viability and seed quantity of the germplasm resource that does not need to be processed out of stock, and generate a warning message for the germplasm resource to prompt corresponding processing of the germplasm resource if the seed viability and / or seed quantity do not meet the requirements.

[0013] In some embodiments, the system further includes a germplasm resource phenotype data acquisition system, which includes a phenotype data management module and a field phenotype data acquisition APP; the field phenotype data acquisition APP is configured to receive user inputted information related to the germplasm resource and send the information to the phenotype data management module; and the phenotype data management module is configured to generate phenotype data of the germplasm resource based on the information and send the phenotype data to the germplasm resource phenotype database for storage.

[0014] In some embodiments, the system further includes a user management system configured to manage information and permissions of users.

[0015] In some embodiments, the system further comprises a first user terminal and a second user terminal; the first user terminal is configured to receive an external request, and send a control instruction corresponding to the external request to the second user terminal, wherein the external request is a germplasm resource information retrieval request, a germplasm resource data sharing request, or a standard sample data retrieval request; and the second user terminal is configured to send germplasm resource data corresponding to the external request to a corresponding external device based on the control instruction.

[0016] In some embodiments, the same germplasm resource has a unique library number code, and the germplasm resource is associated by the library number code in the approved registration sample management system, the germplasm resource library location management system, the germplasm resource phenotype database, and the germplasm resource genotype database.

[0017] In some embodiments, the library number code comprises region information, a library number, a resource number, an event number, a material number, and a material copy number.

[0018] In some embodiments, the germplasm resource preservation process comprises:

[0019] Obtaining germplasm resource information of a variety standard sample;

[0020] Washing seeds of the variety standard sample and detecting whether the viability of the seeds meets the requirements;

[0021] If the viability of the seeds meets the requirements, assigning a short-term library number and a short-term library location, and performing drying, packaging, and weighing processes on the seeds, and storing the seeds in the short-term library according to the short-term library location;

[0022] Obtaining a short-term library out-of-storage request, and extracting a variety standard sample corresponding to the short-term library out-of-storage request;

[0023] For other variety standard samples, if the conditions for storing in a medium-term and long-term library are met, performing identification and evaluation on the seeds;

[0024] After the identification and evaluation pass, performing duplicate checking, duplicate removal, cleaning, and seed viability detection on the seeds;

[0025] If the number of seeds meets the preset conditions, generating a medium-term and long-term library number and a medium-term and long-term library location, and performing drying, packaging, and weighing processes on the seeds, and storing the seeds in the medium-term and long-term library according to the medium-term and long-term library location;

[0026] Obtaining an identification and evaluation out-of-storage request, performing identification and evaluation on the seeds corresponding to the identification and evaluation out-of-storage request, and storing the seeds in the medium-term and long-term library location after the identification and evaluation pass;

[0027] The monitoring out-of-warehouse request is acquired, seed vitality and quantity of the seed corresponding to the monitoring out-of-warehouse request are monitored, if the seed vitality and quantity do not satisfy preset conditions, a warning is sent and the seed is propagated and updated, the seed after the propagation and update is cleaned and stored in a warehouse location in the medium-and-long-term warehouse.

[0028] The beneficial effects of the embodiments of the present application compared with the prior art are:

[0029] In the embodiments of the present application, the approval and registration sample management system, the germplasm resource phenotype database and the germplasm resource genotype database are respectively connected in communication with the germplasm resource warehouse location management system, the approval and registration sample management system manages data of the crop standard sample; the germplasm resource phenotype database stores phenotype data of the crop germplasm resource; the germplasm resource genotype database stores genotype data of the crop germplasm resource; the germplasm resource warehouse location management system manages data of the crop germplasm resource, the data of the crop germplasm resource including a warehouse location, propagation information, inventory quantity and germplasm vitality of the germplasm resource. Moreover, the data of the crop germplasm resource includes data of part of the standard sample in the crop standard sample entering the crop germplasm resource, and the phenotype data of the crop germplasm resource, the genotype data of the crop germplasm resource and the data of the crop germplasm resource are corresponded through warehouse number coding. Through the above approval and registration sample management system, the germplasm resource warehouse location management system, the germplasm resource phenotype database and the germplasm resource genotype database, the crop germplasm resource data can be scientifically managed, and the internet sharing of the crop germplasm resource data can also be realized.

[0030] It should be understood that the foregoing general description and the following detailed description are only exemplary and explanatory, and cannot limit the present specification. BRIEF DESCRIPTION OF DRAWINGS

[0031] In order to more clearly illustrate the technical solutions in the embodiments of the present application, the drawings needed to be used in the embodiments or the prior art description will be briefly introduced below. Obviously, the drawings in the following description are only some embodiments of the present application, and other drawings can also be obtained by those skilled in the art without creative labor.

[0032] Figure 1 is a schematic diagram of a germplasm resource data management system provided by an embodiment of the present application;

[0033] Figure 2 is a network structure schematic diagram of a germplasm resource data management system provided by an embodiment of the present application;

[0034] Figure 3 is a business process schematic diagram of a germplasm resource data management system provided by an embodiment of the present application;

[0035] Figure 4 is a process flow diagram of a germplasm resource survey and collection provided by an embodiment of the present application;

[0036] Figure 5 is a whole process flow diagram of a germplasm resource data management system provided by an embodiment of the present application;

[0037] Figure 6 is a distribution and utilization flowchart provided by an embodiment of the present application;

[0038] Figure 7 is a whole business function diagram of a germplasm resource data management system provided by an embodiment of the present application;

[0039] Figure 8 is an interaction diagram of a germplasm resource data management system and external equipment provided by an embodiment of the present application. DETAILED DESCRIPTION

[0040] In the following description, for purposes of explanation and not limitation, specific details are set forth, such as particular sequences of steps, techniques, etc., in order to provide a thorough understanding of the embodiments of the present application. However, it will be apparent to those skilled in the art that the present application can be practiced in other embodiments that depart from these specific details. In other instances, detailed descriptions of well-known methods, devices, circuits, and

[0041] It will be understood that the term "includes," "including," "has," "having," "comprises," "comprising" as used in the specification and throughout the claims, indicates the presence of the described features, integers, steps, operations, elements, and / or components but does not preclude the presence or addition of one or more other features, integers, steps, operations, elements, components, and / or groups thereof.

[0042] It will be further understood that the term "and / or," as used in the specification and throughout the claims, means any one or more of the associated listed items, and all possible combinations of the items, and includes these combinations.

[0043] As used in the specification and throughout the claims, the term "if" can be interpreted as meaning "when" or "once" or "in response to a determination" or "in response to detecting" depending on the context. Similarly, the phrase "if it is determined" or "if [the described condition or event] is detected" can be interpreted as meaning "once it is determined" or "in response to the determination" or "once [the described condition or event] is detected" or "in response to detecting [the described condition or event]" depending on the context.

[0044] In addition, in the description of the present application and the appended claims, the terms "first", "second", "third", etc. are used only to distinguish descriptions and cannot be understood as indicating or implying relative importance.

[0045] Reference to "one embodiment" or "some embodiments" or "one implementation" or "some implementations" or "one example" or "some examples" described in the present application means that a particular feature, structure, or characteristic described in connection with the embodiment is included in at least one embodiment of the present application. Thus, the appearance of the phrases "in one embodiment", "in some embodiments", "in other embodiments", "in additional embodiments", and the like appearing in various places throughout the specification are not necessarily all referring to the same embodiment, unless otherwise specifically noted. The terms "comprising", "including", "having" and their variants are meant to be construed as "including but not limited to", unless otherwise specifically noted.

[0046] The standard sample of the crop variety stored in the warehouse (hereinafter referred to as the variety standard sample) refers to the seed sample (not including seedlings, seed potatoes) of the application variety submitted by the applicant to the standard sample library for storage when applying for the approval of the variety and the registration of the variety in accordance with the relevant provisions. The variety standard sample is the basis for variety management and the basis for market supervision, and is also an important and excellent crop germplasm resource. The extraction and use of the library standard sample need to be approved by the Seed Management Center, and the variety standard sample stored for more than the protection period will be transferred to the crop germplasm resource long-term library for storage as an excellent germplasm resource.

[0047] Figure 1 is a schematic diagram of a germplasm resource data management system provided by an embodiment of the present application, which is described in detail with reference to Figure 1 The detailed description of the germplasm resource data management system is as follows:

[0048] The above-mentioned germplasm resource data management system can include an approval and registration sample management system, a germplasm resource library position management system, a germplasm resource phenotype database, and a germplasm resource genotype database. The approval and registration sample management system, the resource survey collection management system, the germplasm resource phenotype database, and the germplasm resource genotype database are respectively in communication connection with the germplasm resource library position management system.

[0049] The approval and registration sample management system is used for managing the data of the crop standard sample; the germplasm resource phenotype database is used for storing the phenotype data of the crop germplasm resource; the germplasm resource genotype database is used for storing the genotype data of the crop germplasm resource; the germplasm resource library position management system is used for managing the data of the crop germplasm resource, and the data of the crop germplasm resource includes the library position, the breeding information, the inventory quantity, and the germplasm vigor of the germplasm resource; and the resource survey collection management system is used for surveying and collecting the germplasm resource.

[0050] The data of the crop germplasm resources includes data of the crop standard samples entering the crop germplasm resource part standard samples, and the phenotype data of the crop germplasm resources, the genotype data of the crop germplasm resources and the data of the crop germplasm resources are coded by the library number.

[0051] The function of the above-mentioned germplasm resource data management system covers four links of general survey and collection, systematic investigation and rescue collection, identification and evaluation and cataloging and preservation of crop germplasm resources. The data of the crop germplasm resources generated in the work, such as distribution, image, geographical ecology, habitat data, preliminary identification and evaluation of biological and morphological characteristics, are stored in the database for scientific management, which meets the needs of different personnel to query, statistics and research according to their own needs, and provides accurate original data and resource information for subsequent germplasm resource research.

[0052] For example, the network structure of the above-mentioned germplasm resource data management system can include a data server, a file server, a Web server, a central switch, straight switches 1-3 and laboratory terminals, as shown in Figure 2 The above-mentioned hardware architecture can adopt a tree network structure.

[0053] The database management system of the above-mentioned germplasm resource data management system is MySQL 5.4.1 or above version or Oracle 10g or above version, the middleware (application server) system is Apache or oracle fusion, and the network architecture fully supports TCP / IP protocol. Development tools or technical system: In order to ensure the up-down compatibility of the software, the developer should choose a relatively common development tool to develop, such as Microsoft Visual Studio.Net, C++ Builder, python or J2EE (Java2 Platform Enterprise Edition) and the like.

[0054] The performance of the above-mentioned germplasm resource data management system is introduced as follows.

[0055] 1. Simple operation and user-friendly interface.

[0056] The above-mentioned system adopts Windows graphical interface and Android graphical interface, the system has consistent and friendly customized interface, so that the user can quickly master the use of the system. The system function is targeted, the system interface is simple and friendly, easy to learn and use, and the operability is strong. The design of the system can reduce the training before use, the implementation and the maintenance time in use.

[0057] 2. Standardization principle, stable performance.

[0058] Each subsystem in the above system is structured, standardized, modularized and serialized. The reliability and fault tolerance of the system can be ensured by reasonable and advanced network design and optimized selection of software and hardware.

[0059] 3. Safety and reliability principle.

[0060] Both data query convenience and data management operability are achieved, and the safety of data is ensured, so that all data can be traced back to the source.

[0061] 4. Scalable, advanced and flexible.

[0062] The system adopts standardized database and open software development architecture to facilitate daily code maintenance and future implantation of new function modules. The existing mature computer technology, network technology and software development technology are fully applied to provide high-performance system for users. The system uses advanced B / S structure and has high performance and reliability.

[0063] In the embodiment of the application, the same kind of resource has a unique library number code, and the germplasm resources are associated through the library number code in the sample management system, the germplasm resource library position management system, the germplasm resource phenotype database and the germplasm resource genotype database.

[0064] For example, the library number code can include region information, library number, resource number, event number, material number and material duplicate number. For example, the length of the library number code can be 20 bits, H 05 11113101 0100001 01, H represents A region library, 05 represents No. 5 library, 11113101 represents plant food crop wheat, 01 represents system collection, 00001 represents the first material, and 01 represents the first duplicate material.

[0065] For example, the germplasm resource database code can be designed to have a capacity of 1 million material numbers; the material code can include four parts of information: location, germplasm resource, material and track tracking. The code is the only retrieval basis throughout the internal systems of each subsystem, and can be designed as a two-dimensional code format for easy use. The code form can be a mixed decimal code of letters and numbers, with a total length of 26 bits; according to the balance design of the demand for external distribution and sharing and the internal security requirements, 18-bit simplified short code can be used when distributed externally. The library number is divided into four levels: location number, germplasm resource number, event number (track tracking number) and material number.

[0066] The germplasm resource bank entity can be divided into seed bank, in vitro material bank, and ultra-low temperature bank. According to the preservation object and preservation condition, the following preservation forms are divided: short-term bank, medium-term bank, long-term bank, and standard bank. The medium-term bank and the long-term bank can preserve germplasm resources through metal boxes and bags (such as kraft paper bags and cloth bags). The in vitro material bank can preserve germplasm resources through bottles and test tubes. The ultra-low temperature bank can preserve germplasm resources through cryopreservation boxes and cryopreservation tubes. The coding of the existing samples in the in vitro material bank and the ultra-low temperature bank can include: ①Germplasm code, refer to germplasm resource code; ②Treatment code, refer to event number (track number). The coding of the in vitro material bank and the ultra-low temperature test tube can include: location information + serial number.

[0067] Example 1:

[0068] The long coding has a coding length of 20 bits, and the characters are mixed with decimal digits. The long coding can be: H + bank number + resource number + event number + material number + material copy number, for example: H 05 11113101 0100001 01. The meaning represented by this code is: the first copy of the first material of the wheat collected by Hebei Bank No. 05 bank plant food crop wheat.

[0069] Example 2:

[0070] The short coding has a coding length of 16 bits, and the characters are mixed with decimal digits. The short coding can be: H + resource number + material number, for example: H 11113101 00001. The meaning represented by this code is: the first material of the wheat collected by Hebei Bank No. 5 bank plant food crop wheat. For the above-mentioned "resource number", according to the "National Natural Resource Information Sharing Standard", the "big category, first level, second level, third level" four items are used; big category 1 bit, first level 2 bits, second level 2 bits, third level 3 bits, a total of 8 bits to represent the resource number.

[0071] For example, the resource number process of wheat is as follows: the big category is plant (corresponding to the number 1), the first level can include: food crops, fiber crops, oil crops, vegetables, fruit trees, flowers, pasture, sugar tobacco tea mulberry and other crops, wheat corresponds to food crops in the first level (corresponding to the number 11), the second level is wheat (corresponding to the number 13), and the third level is wheat (corresponding to the number 101). Therefore, the resource number corresponding to wheat can be: 1 11 13 101.

[0072] For the coding scheme of the in vitro material bank and the ultra-low temperature bank, the preservation method of germplasm resources includes bottles and test tubes. The bottles can be directly placed on the shelf, the test tubes are placed in beakers, and the beakers are placed on the shelf. Two-dimensional codes are pasted on the bottles and test tubes, and one two-dimensional code is pasted on the cover and side of the bottles and test tubes.

[0073] In addition, for the ex vivo material library and the ultra-low temperature library, the position information and the material number are a one-to-many relationship. The reasons include the following points: ① The ex vivo library and the ultra-low temperature library have limited positions, and the positions need to be reused; ② The same position of the ex vivo library and the ultra-low temperature library needs to save multiple copies of the same material; ③ The material of the ex vivo library requires to be updated once every 6 months. The distribution and utilization are for the test-tube seedlings.

[0074] In some embodiments, the evaluation and registration sample management system can be specifically used for: obtaining a standard sample registration request, detecting seed viability of the standard sample; generating a library number code for the standard sample after the seed viability of the standard sample meets the preset requirements; and storing the standard sample in the library based on the library number code.

[0075] For example, after detecting a variety standard sample extraction request, the corresponding standard sample is processed for out-of-stock; and after not detecting a variety standard sample extraction request, the corresponding standard sample is converted into germplasm resources, and corresponding data is sent to a germplasm resource library position management system, so that the germplasm resource library position management system stores the germplasm resources based on the library number code.

[0076] In some embodiments, the germplasm resource library position management system can be specifically used for: obtaining a germplasm resource storage request, detecting seed viability of the germplasm resource; generating a library number code for the germplasm resource after the seed viability of the germplasm resource meets the preset requirements; and storing the germplasm resource in the library based on the library number code.

[0077] For example, after detecting a germplasm resource storage request, the corresponding germplasm resource is processed for out-of-stock; for the germplasm resources that do not need to be processed for out-of-stock, the seed viability and the seed amount of the germplasm resources are detected, and if the seed viability and / or the seed amount do not meet the requirements, a warning information of the seed resource is generated to prompt corresponding processing of the germplasm resources.

[0078] The system is designed according to the process of collecting and storing germplasm resources, and therefore has strong practicability and operability, as shown in the following. Figure 3

[0079] (1) Collection process

[0080] The collection work follows the Crop Germplasm Standard Technical Specification published by the National Crop Science Data Center in April 2008.

[0081] ​The collection of germplasm resources is divided into four ways: general collection, foreign introduction, systematic collection and general survey. The first two ways are more commonly used in daily work, and the last two ways are applied in the national crop germplasm resources survey and collection action. According to the third crop germplasm resources survey and collection action in Hebei Province, the overall work core is divided into five links: general survey, systematic collection, systematic arrangement, identification and evaluation, and cataloging and preservation. Each link establishes a corresponding work sub-process according to the project technical specification, such as Figure 4 .

[0082] (2) Preservation process

[0083] The system is designed according to the work flow of seed introduction and distribution, so it has strong practicality and operability. As shown in Figure 5 .

[0084] The introduced seeds are operated through the system from the initial seed registration, duplication checking, determination of seeds into the warehouse, and seed pre-treatment work. The germination rate, moisture content, seed weight and other information generated are all timely entered into the system. Similarly, the seed distribution process is also operated through the system: the information of the units needing seeds and the purpose of seed extraction is entered into the system, and the dynamic information of the inventory seeds is updated in time.

[0085] (3) Reproduction update process

[0086] The work procedure of germplasm resource reproduction update includes: developing sowing plan (field planning), trait investigation and checking, and harvesting and seed (organ) treatment.

[0087] (4) Identification and evaluation process

[0088] The work procedure of germplasm resource identification and evaluation includes: developing sowing plan (field planning), field identification and indoor identification, harvesting, and indoor seed examination.

[0089] (5) Distribution and utilization process

[0090] As shown in Figure 6 , if the purpose of the user obtaining germplasm resources meets the requirements of the "Crop Germplasm Resources Management Measures", the user can query the germplasm distribution directory through the website, apply for utilization of germplasm from the germplasm bank, fill in and submit the "Germplasm Resource Utilization Application Form". The germplasm bank should provide the germplasm to the user in time after receiving the application form.

[0091] (6) Standard product preservation process

[0092] As shown in Figure 5 .As shown, the applicant of the registered crop variety in A province submits the application file and crop variety sample to the seed management center of A province according to the relevant provisions when applying for variety approval and variety registration. The crop variety sample is submitted to the sample library of A province (the center) to save the seed (not including seedlings and seed potatoes, the same below) sample of the application variety.

[0093] The standard sample is registered, cleaned, and viability is detected. If the viability of the standard sample is not enough, it is temporarily stored in the standard sample library and destroyed after one year. If the viability of the standard sample meets the requirements, it is stored in the standard sample library and converted into resources to enter the long-term germplasm resource library of A province as long-term preservation of germplasm resources after the protection period.

[0094] Through the system operation, the germination rate, water content, seed weight and all other information generated are timely recorded into the system. The standard sample out of the warehouse is divided into standard sample extraction and resource out of the warehouse. After approval by the seed management center, the extracted standard sample is used for variety protection or resource research, which must comply with the management system to ensure the safety of the variety sample. Without approval, no one can extract or replace the variety sample from the A province agricultural biological resource preservation center.

[0095] For example, see Figure 5 , the germplasm resource preservation process can include:

[0096] Obtaining germplasm resource information of the variety sample;

[0097] Rinsing the seeds of the variety sample and detecting whether the viability of the seeds meets the requirements;

[0098] If the viability of the seeds meets the requirements, a short-term library number and a short-term library location are assigned, the seeds are dried, packaged and weighed, and the seeds are stored in the warehouse according to the above short-term library location;

[0099] Obtaining a short-term library out-of-warehouse request, extracting the variety sample corresponding to the short-term library out-of-warehouse request;

[0100] For other variety samples, if the conditions for storage into the medium and long-term library are met, the seeds are identified and evaluated;

[0101] After the identification and evaluation pass, the seeds are subjected to duplicate checking, duplicate removal, cleaning operation, and seed viability detection;

[0102] If the number of seeds meets the preset conditions, a medium and long-term library number and a medium and long-term library location are generated, the seeds are dried, packaged and weighed, and the seeds are stored in the warehouse according to the above medium and long-term library location;

[0103] Obtaining an identification and evaluation out-of-warehouse request, identifying and evaluating the seeds corresponding to the identification and evaluation out-of-warehouse request, and after the identification and evaluation pass, storing the seeds in the location in the medium and long-term library;

[0104] The monitoring out-of-warehouse request is obtained, seed vitality and quantity of the seed corresponding to the monitoring out-of-warehouse request are monitored, if the seed vitality and quantity do not satisfy preset conditions, a warning is issued and the seed is propagated and updated, the seed after the propagation and update is cleaned and stored in a warehouse position in the medium-and-long-term warehouse.

[0105] In some embodiments, the above-mentioned germplasm resource data management system can further include a germplasm resource phenotype data collection system, which includes a phenotype data management module and a field phenotype data collection APP. The field phenotype data collection APP is used to receive germplasm resource related information input by a user and send the germplasm resource related information to the phenotype data management module. The phenotype data management module is used to generate germplasm resource phenotype data based on the germplasm resource related information and send the germplasm resource phenotype data to a germplasm resource phenotype database for storage.

[0106] In some embodiments, the above-mentioned germplasm resource data management system can further include a first user terminal and a second user terminal. The first user terminal is used to receive external requests and send control instructions corresponding to the external requests to the second user terminal. The external requests can include germplasm resource information retrieval requests, germplasm resource data sharing requests, and standard sample data retrieval requests. The second user terminal is used to send germplasm resource data corresponding to the external requests to corresponding external devices based on the control instructions.

[0107] As shown in Figure 7 , the central business of the above-mentioned germplasm resource data management system can include warehouse position management, resource collection management, germplasm commonality description information management, germplasm phenotype information management, germplasm genotype information management, germplasm in-and-out-of-warehouse management, management of different users, resource library early warning management, data statistics, etc.

[0108] General collection management, approved registration sample management, in-warehouse resource library position management, general resource collection management, germplasm resource information description specification management, germplasm phenotype data management, germplasm genotype data management, in-stock germplasm vitality management, germplasm in-and-out-of-warehouse management, system user management, in-stock resource early warning management, data query statistics and traceability management, etc. Various management works are respectively realized by the business function design of the software on the physical layer, the data layer and the information service layer.

[0109] As shown in Figure 8 , the breeder terminal can send a germplasm resource information retrieval request to the first user terminal (chief terminal) in the above-mentioned germplasm resource data management system, the national germplasm resource library can send a germplasm resource data sharing request to the first user terminal (chief terminal) in the above-mentioned germplasm resource data management system, and the A province seed station can send a standard sample data retrieval request to the first user terminal (chief terminal) in the above-mentioned germplasm resource data management system.

[0110] The first user terminal, after receiving the above request, can send a corresponding control instruction to the second user terminal (library administrator terminal). The second user terminal obtains the corresponding germplasm resource data from the germplasm resource management system or the approved registration sample management system based on the control instruction and sends it to the corresponding external device.

[0111] The main purpose of the present application is to take the germplasm resource as the core, to build a germplasm resource library site management system, an approved registration sample management system, a germplasm resource phenotype database, a germplasm resource genotype database, a user management system and an information sharing website system. The five systems form a germplasm resource information management system, as shown in Figure 1 A library site management system is developed to realize the orderly management of germplasm resources from receiving, warehousing, and delivery, and to be able to understand the library site information, propagation information, inventory, and germplasm vigor information of the inventory germplasm resources at any time, while meeting the needs of various data statistical analysis. A germplasm resource phenotype and genotype database is developed, which can query the germplasm resource characteristic data information through the Internet at any time. The collection, identification and evaluation data of crop germplasm resources can be updated and maintained on the Internet at any time. The crop germplasm resource management and system user management are realized through the user management system, and the key data items are associated between the systems. The crop germplasm resource phenotype data and DNA fingerprint data in A province are shared on the Internet.

[0112] The above-mentioned germplasm resource data management system can realize the informatization and network management of the overall process of germplasm resource preservation and utilization. The system functions cover five major links of germplasm resource collection, preservation, propagation and updating, identification and evaluation, and distribution and utilization. The phenotype data, genotype data and work information generated in the work are stored in the system for scientific management to meet the needs of different personnel to query, statistics and research according to their own needs, and to provide germplasm physical protection and resource information sharing for crop breeding and production utilization.

[0113] The above-mentioned germplasm resource data management system can realize the informatization and network management of the crop standard sample preservation work. The crop standard sample preservation and extraction work is also included in the system management according to the work needs to realize the informatization and network of the standard sample preservation work. At the same time, the statistical summary and traceability requirements can be realized in the system to ensure the safety and standardization of the standard sample preservation management work.

[0114] The above-mentioned germplasm resource data management system can realize the standardization and normalization of resource preservation and utilization process. The system data standard realizes the standardization and normalization of germplasm resource collation, preservation, propagation, update and identification and evaluation process according to the data items and data description specified in the crop germplasm resource standard "Crop Germplasm Resource Technical Specification" published by the National Crop Science Data Center in April 2008.

[0115] The above-mentioned germplasm resource data management system can realize the docking of resource collection process and national information platform. The new system can realize data interface docking with the two systems of the "Third Germplasm Resource Survey and Collection Action" work, so that the data of "Germplasm Resource Survey Data Filling System v3.0" and "Crop Germplasm Resource Survey and Collection Data Filling System V2.0" can be directly imported into the system without processing. The system data can be directly reported to the national germplasm resource platform to realize the data sharing function with the national germplasm resource platform.

[0116] The above-mentioned germplasm resource data management system can realize the diversification of system terminal. The system terminal can be installed on computers, mobile phones, tablet computers and other devices to provide convenient and accurate working basis for resource management work, and realize the standardization and normalization of resource collation, preservation and identification and evaluation work.

[0117] The above-mentioned germplasm resource data management system can realize the visualization of library location management and the traceability of germplasm resource material management two-dimensional code. The visualization of library location management means that the location of the saved resource materials in the germplasm resource library is displayed in the form of graphics, and the full or empty condition of the storage basket is displayed intuitively through the graphical indication. The germplasm resource material management realizes the traceability of two-dimensional code, and quickly obtains the information related to the preservation of germplasm.

[0118] The above-mentioned germplasm resource data management system can realize the network sharing of germplasm resource information. It provides a fast, convenient and accurate channel for breeders and researchers to obtain germplasm resources, and saves the feedback information of users using germplasm resources, provides trace data for users, and provides a basis for germplasm resource management and research.

[0119] The application scenarios of the above-mentioned germplasm resource data management system are described as follows.

[0120] In order to realize the informatization and network management of the whole process of germplasm resource preservation, the system design should meet the application needs of different application scenarios according to different locations and application terminals. According to the work flow and work location, the application scenarios are summarized as follows.

[0121] According to the work needs, the system client can run on mobile phones, tablet computers and office computers, as shown in Table 1. According to the work needs, the work flow corresponds to the work location as shown in Table 2.

[0122] Table 1 Application terminal device corresponding table

[0123]

[0124] Table 2 Workflow corresponding table

[0125]

[0126] The above system is based on computer network technology, adopts multi-layer structure, integrates multimedia technology, remote communication technology and IT technology, integrates various types of software tools into a large system with the same user interface, realizes the management and sharing of crop germplasm resources on a network, is designed in a streaming manner according to the central standardized business program, and uses an advanced database system for data management.

[0127] The new crop germplasm resource management system takes improving the management level as the overall goal, provides more perfect and more convenient information management services for scientific researchers and breeders, and maximizes the needs of scientific researchers and breeders. These improvements can promote the standardization, standardization and diversification of the center's resource management work, improve the management level and work efficiency.

[0128] The above design makes a good trade-off between time efficiency, space efficiency, maintenance cost and actual needs of users, and the final scheme is obtained based on the actual situation of the crop germplasm resource preservation center, time efficiency and actual needs of users.

[0129] In the above embodiments, the description of each embodiment has its own emphasis, and the parts not described or recorded in a certain embodiment can be referred to the related description of other embodiments.

[0130] Those skilled in the art can realize that the units and algorithm steps of each example described in combination with the embodiments disclosed in the present text can be realized by electronic hardware or a combination of computer software and electronic hardware. Whether the functions are executed in hardware or software depends on the specific application and design constraints of the technical solution. Professional technicians can use different methods to implement the described functions for each specific application, but such implementation should not be considered beyond the scope of the present application.

[0131] In the embodiments provided by the present application, it should be understood that the disclosed apparatus / network device and method can be implemented in other manners. For example, the embodiments of the apparatus / network device described above are merely illustrative. For example, the division of the modules or units is merely logical function division, and there can be another division manner in actual implementation. For example, a plurality of units or components can be combined or integrated into another system, or some features can be ignored or not executed. In addition, the displayed or discussed mutual couplings or direct couplings or communication connections between the units can be indirect couplings or communication connections through some interfaces, devices or units, and can be electrical, mechanical or in other forms.

[0132] The units described as separate components can or can not be physically separate, and the components shown as units can or can not be physical units, that is, can be located in one place, or can be distributed on a plurality of network units. Part or all of the units can be selected according to actual needs to achieve the purpose of the embodiments.

[0133] The above-described embodiments are merely used to illustrate the technical solutions of the present application, but not limit them; although the present application has been described in detail with reference to the foregoing embodiments, those skilled in the art should understand that: it can still modify the technical solutions recorded in the foregoing embodiments, or make equivalent replacements for part of the technical features; and these modifications or replacements do not make the essence of the corresponding technical solutions deviate from the spirit and scope of the technical solutions of the embodiments of the present application, and should be included in the protection scope of the present application.

Claims

1. A germplasm data management system, characterized by, The application comprises a management system for approved registration samples, a management system for resource survey collection, a management system for germplasm resource storage, a phenotype database for germplasm resources and a genotype database for germplasm resources, wherein the management system for approved registration samples, the management system for resource survey collection, the phenotype database for germplasm resources and the genotype database for germplasm resources are in communication connection with the management system for germplasm resource storage; The management system for approved registration samples is used for managing data of crop standard samples; the phenotype database for germplasm resources is used for storing phenotype data of crop germplasm resources; the genotype database for germplasm resources is used for storing genotype data of crop germplasm resources; the management system for germplasm resource storage is used for managing data of crop germplasm resources, wherein the data of crop germplasm resources comprises storage location, breeding information, stock quantity and germplasm vigor of germplasm resources; and the management system for resource survey collection is used for surveying and collecting germplasm resources; The data of crop germplasm resources comprises data of standard samples entering crop germplasm resources, and the phenotype data of crop germplasm resources, the genotype data of crop germplasm resources and the data of crop germplasm resources are coded by a storage number code; the storage number code comprises region information, storage number, resource number, event number, material number and material duplicate number; the material number comprises four parts of information, i.e. location, germplasm resource, material and track tracing; the storage number code is a unique retrieval basis throughout all subsystems in the system and is designed in the form of two-dimensional code; The storage number is divided into four levels, i.e. location number, germplasm resource number, event number and material number; The germplasm resource storage entity comprises a seed bank, an in vitro material bank and a cryogenic bank, and the seed bank comprises a short-term bank, a medium-term bank, a long-term bank and a standard sample bank; The management system for approved registration samples is specifically used for: acquiring a standard sample registration request and detecting seed viability of the standard sample; generating a storage number code for the standard sample when the seed viability of the standard sample meets preset requirements; storing the standard sample based on the storage number code; The germplasm resource storage process comprises: acquiring germplasm resource information of a variety standard sample; washing seeds of the variety standard sample and detecting whether the seed viability meets requirements; if the seed viability meets requirements, assigning a short-term bank storage number and a short-term bank storage location, drying, packaging and weighing the seeds, and storing the seeds in the short-term bank according to the short-term bank storage location; acquiring a short-term bank storage request and extracting a variety standard sample corresponding to the short-term bank storage request; for other variety standard samples, if the seeds meet the conditions for storage in a medium-term or long-term bank, identifying and evaluating the seeds; after the identification and evaluation pass, performing seed duplication detection, deduplication and cleaning operations, and detecting seed viability; if the number of seeds meets preset conditions, generating a medium-term or long-term bank storage number and a medium-term or long-term bank storage location, drying, packaging and weighing the seeds, and storing the seeds in the medium-term or long-term bank according to the medium-term or long-term bank storage location; and The identification and evaluation of the identification and evaluation of the seed is carried out, and the seed is stored in the storage position of the medium and long-term library after the identification and evaluation is passed; The seed vitality and the seed quantity of the seed corresponding to the monitoring and taking-out request are monitored, and if the seed vitality and the seed quantity do not meet the preset conditions, a warning is issued and the seed is propagated and updated, and the seed after the propagation and update is washed and stored in the storage position of the medium and long-term library; The working procedure of the germplasm resource identification and evaluation includes formulating a sowing scheme, field identification and indoor identification, harvesting and indoor seed examination; The standard sample management system is also used for: After detecting the variety standard sample extraction request, the corresponding standard sample is taken out of the library; If the variety standard sample extraction request is not detected, the corresponding standard sample is converted into a germplasm resource, and the corresponding data is sent to the germplasm resource storage position management system, so that the germplasm resource storage position management system stores the germplasm resource based on the library number code; The germplasm resource storage position management system is specifically used for: Obtaining a germplasm resource storage request, detecting the seed vitality of the germplasm resource; After the seed vitality of the germplasm resource meets the preset requirements, a library number code is generated for the germplasm resource; Based on the library number code, the germplasm resource is stored; The germplasm resource data management system further includes a first user terminal and a second user terminal; The first user terminal is used to receive an external request and send a control instruction corresponding to the external request to the second user terminal, wherein the external request includes a germplasm resource information retrieval request, a germplasm resource data sharing request and a standard sample data retrieval request; The second user terminal is used to send the germplasm resource data corresponding to the external request to the corresponding external device based on the control instruction.

2. The germplasm data management system of claim 1, wherein, The germplasm resource storage position management system is also used for: After detecting the germplasm resource storage request, the corresponding germplasm resource is taken out of the library; For germplasm resources that do not need to be taken out of the library, the seed vitality and the seed quantity of the germplasm resource are detected, and if the seed vitality and / or the seed quantity do not meet the requirements, warning information of the germplasm resource is generated to prompt corresponding processing of the germplasm resource.

3. The germplasm data management system of claim 1, wherein, The same germplasm resource has a unique library number code, and the germplasm resource is associated by the library number code in the standard sample management system, the germplasm resource storage position management system, the germplasm resource phenotype database and the germplasm resource genotype database.

4. The germplasm data management system of claim 1, wherein, The system further includes a germplasm resource phenotype data acquisition system, and the germplasm resource phenotype data acquisition system includes a phenotype data management module and a field phenotype data acquisition APP; The field phenotype data acquisition APP is used to receive germplasm resource related information input by a user and send the germplasm resource related information to the phenotype data management module; The phenotype data management module is used to generate the germplasm resource phenotype data based on the germplasm resource related information and send the germplasm resource phenotype data to the germplasm resource phenotype database for storage.

5. The germplasm data management system of claim 1, wherein, The germplasm resource data management system further comprises a user management system, which is configured to manage information and rights of users. The germplasm resource data management system further comprises a user management system, which is configured to manage information and rights of users.

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