Compounds, compositions, and methods
Patent Information
- Application Number
- EP2022796883
- Authority / Receiving Office
- EP · EP
- Patent Type
- Applications
- Current Assignee / Owner
- Priority Date
- 2021-11-19
- Filing Date
- 2022-04-29
- Publication Date
- 2025-09-24
AI Technical Summary
Current therapeutic agents targeting NLRP3-dependent cytokines have limitations, particularly for treating auto-inflammatory and chronic inflammatory diseases, necessitating the development of direct NLRP3 antagonists with improved efficacy and safety profiles.
Development of compounds and pharmaceutical compositions that modulate or inhibit NLRP3 activity, including pharmaceutically acceptable salts, isotopically enriched analogs, stereoisomers, and prodrugs, for use in treating diseases mediated by NLRP3, such as inflammatory bowel disease and Crohn’s disease, especially in subjects resistant to anti-TNF-α agents.
The compounds effectively treat and prevent NLRP3-mediated diseases by directly antagonizing NLRP3, offering potential therapeutic benefits for conditions where existing treatments are inadequate, particularly for inflammatory bowel diseases.
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Abstract
Description
COMPOUNDS, COMPOSITIONS, AND METHODS CROSS REFERENCE TO RELATED APPLICATIONS
[0001] This application claims the benefit under 35 U.S.C. §119(d) to PCT application number PCT / US2021 / 060088, filed November 19, 2021, and claims the benefit under 35 U.S.C. §119(e) to U.S. Provisional Application Numbers 63 / 182,741, filed April 30, 2021, and 63 / 256,393, filed October 15, 2021, each of which is incorporated by reference in its entirety. FIELD
[0002] The present disclosure relates generally to small molecule modulators of NLR Family Pyrin Domain Containing 3 (NLRP3), and their use as therapeutic agents. BACKGROUND
[0003] Inhibition of NLRP3 activation has been shown to result in potent therapeutic effects in animal models of inflammatory diseases. Modulators of NLRP3, inhibitors in particular, have broad therapeutic potential in a wide array of auto-inflammatory and chronic inflammatory diseases that either require better treatment options or for which no adequate therapies exist. Therapies targeting NLRP3-dependent cytokines are already approved for therapeutic use; however, they have notable disadvantages relative to direct NLRP3 antagonists. There remains a strong impetus for the discovery and clinical development of molecules that antagonize NLRP3. DESCRIPTION
[0004] Provided herein are compounds, or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof, that are useful in treating and / or preventing diseases mediated, at least in part, by NLRP3.
[0005] In some embodiments, provided are compounds that modulate the activity of NLRP3. In some embodiments, the compounds inhibit the activation of NLRP3.
[0006] In another embodiment, provided is a pharmaceutical composition comprising a compound as described herein, or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof, and a pharmaceutically acceptable carrier.
[0007] In another embodiment, provided is a method for treating a disease or condition mediated, at least in part, by NLRP3, the method comprising administering an effective amount of the pharmaceutical composition comprising a compound as described herein, or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof.
[0008] In another embodiment, provided is a method for treating a disease or condition mediated, at least in part, by TNF-α, the method comprising administering an effective amount of the pharmaceutical composition comprising a compound as described herein, or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof. In some embodiments the administration is to a subject resistant to treatment with an anti-TNF-α agent. In some embodiments, the disease is a gut disease or condition. In some embodiments the disease or condition is inflammatory bowel disease, Crohn’s disease, or ulcerative colitis.
[0009] The disclosure also provides compositions, including pharmaceutical compositions, kits that include the compounds, or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof, methods of using (or administering) and making the compounds, or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof, and intermediates thereof.
[0010] The disclosure further provides compounds, or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof, or compositions thereof for use in a method of treating a disease, disorder, or condition that is mediated, at least in part, by NLRP3.
[0011] Moreover, the disclosure provides uses of the compounds, or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof, or compositions thereof in the manufacture of a medicament for the treatment of a disease, disorder, or condition that is mediated, at least in part, by NLRP3.
[0012] The description herein sets forth exemplary embodiments of the present technology. It should be recognized, however, that such description is not intended as a limitation on the scope of the present disclosure but is instead provided as a description of exemplary embodiments. 1. Definitions
[0013] As used in the present specification, the following words, phrases and symbols are generally intended to have the meanings as set forth below, except to the extent that the context in which they are used indicates otherwise.
[0014] A dash (“-”) that is not between two letters or symbols is used to indicate a point of attachment for a substituent. For example, -C(O)NH2 is attached through the carbon atom. A dash at the front or end of a chemical group is a matter of convenience; chemical groups may be depicted with or without one or more dashes without losing their ordinary meaning. A wavy line or a dashed line drawn through a line in a structure indicates a specified point of attachment of a group. Unless chemically or structurally required, no directionality or stereochemistry is indicated or implied by the order in which a chemical group is written or named.
[0015] The prefix “Cu-v” indicates that the following group has from u to v carbon atoms. For example, “C1-6alkyl” indicates that the alkyl group has from 1 to 6 carbon atoms.
[0016] Reference to “about” a value or parameter herein includes (and describes) embodiments that are directed to that value or parameter per se. In certain embodiments, the term “about” includes the indicated amount ± 10%. In other embodiments, the term “about” includes the indicated amount ± 5%. In certain other embodiments, the term “about” includes the indicated amount ± 1%. Also, to the term “about X” includes description of “X”. Also, the singular forms “a” and “the” include plural references unless the context clearly dictates otherwise. Thus, e.g., reference to “the compound” includes a plurality of such compounds and reference to “the assay” includes reference to one or more assays and equivalents thereof known to those skilled in the art.
[0017] “Alkyl” refers to an unbranched or branched saturated hydrocarbon chain. As used herein, alkyl has 1 to 20 carbon atoms (i.e., C1-20alkyl), 1 to 12 carbon atoms (i.e., C1-12alkyl), 1 to 8 carbon atoms (i.e., C1-8 alkyl), 1 to 6 carbon atoms (i.e., C1-6alkyl), or 1 to 4 carbon atoms (i.e., C1-4 alkyl). Examples of alkyl groups include, e.g., methyl, ethyl, propyl, isopropyl, n-butyl, sec-butyl, iso-butyl, tert-butyl, pentyl, 2-pentyl, isopentyl, neopentyl, hexyl, 2-hexyl, 3-hexyl, and 3-methylpentyl. When an alkyl residue having a specific number of carbons is named by chemical name or identified by molecular formula, all positional isomers having that number of carbons may be encompassed; thus, for example, “butyl” includes n-butyl (i.e., -(CH2)3CH3), sec-butyl (i.e., -CH(CH3)CH2CH3), isobutyl (i.e., -CH2CH(CH3)2), and tert-butyl (i.e., -C(CH3)3); and “propyl” includes n-propyl (i.e., -(CH2)2CH3), and isopropyl (i.e., -CH(CH3)2).
[0018] Certain commonly used alternative chemical names may be used. For example, a divalent group such as a divalent “alkyl” group, a divalent “aryl” group, a divalent heteroaryl group, etc., may also be referred to as an “alkylene” group or an “alkylenyl” group (for example, methylenyl, ethylenyl, and propylenyl), an “arylene” group or an “arylenyl” group (for example, phenylenyl or napthylenyl, or quinolinyl for heteroarylene), respectively. Also, unless indicated explicitly otherwise, where combinations of groups are referred to herein as one moiety, e.g., arylalkyl or aralkyl, the last mentioned group contains the atom by which the moiety is attached to the rest of the molecule.
[0019] “Alkenyl” refers to an alkyl group containing at least one (e.g., 1-3, or 1) carbon-carbon double bond and having from 2 to 20 carbon atoms (i.e., C2-20alkenyl), 2 to 12 carbon atoms (i.e., C2-12alkenyl), 2 to 8 carbon atoms (i.e., C2-8alkenyl), 2 to 6 carbon atoms (i.e., C2-6alkenyl), or 2 to 4 carbon atoms (i.e., C2-4alkenyl). Examples of alkenyl groups include, e.g., ethenyl, propenyl, butadienyl (including 1,2- butadienyl, and 1,3-butadienyl).
[0020] “Alkynyl” refers to an alkyl group containing at least one (e.g., 1-3, or 1) carbon-carbon triple bond and having from 2 to 20 carbon atoms (i.e., C2-20alkynyl), 2 to 12 carbon atoms (i.e., C2-12alkynyl), 2 to 8 carbon atoms (i.e., C2-8alkynyl), 2 to 6 carbon atoms (i.e., C2-6alkynyl), or 2 to 4 carbon atoms (i.e., C2-4alkynyl). The term “alkynyl” also includes those groups having one triple bond and one double bond.
[0021] “Alkoxy” refers to the group “alkyl-O-”. Examples of alkoxy groups include, e.g., methoxy, ethoxy, n-propoxy, iso-propoxy, n-butoxy, tert-butoxy, sec-butoxy, n-pentoxy, n-hexoxy, and 1,2-dimethylbutoxy.
[0022] “Alkoxyalkyl” refers to the group “alkyl-O-alkyl”.
[0023] “Alkylthio” refers to the group “alkyl-S-”. “Alkylsulfinyl” refers to the group “alkyl-S(O)-”. “Alkylsulfonyl” refers to the group “alkyl-S(O)2-”. “Alkylsulfonylalkyl” refers to -alkyl-S(O)2-alkyl.
[0024] “Acyl” refers to a group -C(O)Ry, wherein Ryis hydrogen, alkyl, alkenyl, alkynyl, cycloalkyl, heterocyclyl, aryl, heteroalkyl, or heteroaryl; each of which may be optionally substituted, as defined herein. Examples of acyl include, e.g., formyl, acetyl, cyclohexylcarbonyl, cyclohexylmethyl-carbonyl, and benzoyl.
[0025] “Amido” refers to both a “C-amido” group which refers to the group -C(O)NRyRzand an “N- amido” group which refers to the group -NRyC(O)Rz, wherein Ryand Rzare independently hydrogen, alkyl, alkenyl, alkynyl, cycloalkyl, heterocyclyl, aryl, heteroalkyl, or heteroaryl; each of which may be optionally substituted, as defined herein, or Ryand Rzare taken together to form a cycloalkyl or heterocyclyl; each of which may be optionally substituted, as defined herein.
[0026] “Amino” refers to the group -NRyRzwherein Ryand Rzare independently hydrogen, alkyl, alkenyl, alkynyl, cycloalkyl, heterocyclyl, aryl, heteroalkyl, or heteroaryl; each of which may be optionally substituted, as defined herein.
[0027] “Amidino” refers to -C(NRy)(NRz2), wherein Ryand Rzare independently hydrogen, alkyl, alkenyl, alkynyl, cycloalkyl, heterocyclyl, aryl, heteroalkyl, or heteroaryl; each of which may be optionally substituted, as defined herein.
[0028] “Aryl” refers to an aromatic carbocyclic group having a single ring (e.g., monocyclic) or multiple rings (e.g., bicyclic or tricyclic) including fused systems. As used herein, aryl has 6 to 20 ring carbon atoms (i.e., C6-20 aryl), 6 to 12 carbon ring atoms (i.e., C6-12 aryl), or 6 to 10 carbon ring atoms (i.e., C6-10 aryl). Examples of aryl groups include, e.g., phenyl, naphthyl, fluorenyl, and anthryl. Aryl, however, does not encompass or overlap in any way with heteroaryl defined below. If one or more aryl groups are fused with a heteroaryl, the resulting ring system is heteroaryl regardless of point of attachment. If one or more aryl groups are fused with a heterocyclyl, the resulting ring system is heterocyclyl regardless of point of attachment. If one or more aryl groups are fused with a cycloalkyl, the resulting ring system is cycloalkyl regardless of point of attachment.
[0029] “Arylalkyl” or “Aralkyl” refers to the group “aryl-alkyl-”.
[0030] “Carbamoyl” refers to both an “O-carbamoyl” group which refers to the group -O-C(O)NRyRzand an “N-carbamoyl” group which refers to the group -NRyC(O)ORz, wherein Ryand Rzare independently hydrogen, alkyl, alkenyl, alkynyl, cycloalkyl, heterocyclyl, aryl, heteroalkyl, or heteroaryl; each of which may be optionally substituted, as defined herein.
[0031] “Carboxyl ester” or “ester” refer to both -OC(O)Rxand -C(O)ORx, wherein Rxis alkyl, alkenyl, alkynyl, cycloalkyl, heterocyclyl, aryl, heteroalkyl, or heteroaryl; each of which may be optionally substituted, as defined herein.
[0032] “Cyanoalkyl” refers to refers to an alkyl group as defined above, wherein one or more (e.g., 1 or 2) hydrogen atoms are replaced by a cyano (-CN) group.
[0033] “Cycloalkyl” refers to a saturated or partially unsaturated cyclic alkyl group having a single ring or multiple rings including fused, bridged, and spiro ring systems. The term “cycloalkyl” includes cycloalkenyl groups (i.e., the cyclic group having at least one double bond) and carbocyclic fused ring systems having at least one sp3carbon atom (i.e., at least one non-aromatic ring). As used herein, cycloalkyl has from 3 to 20 ring carbon atoms (i.e., C3-20cycloalkyl), 3 to 14 ring carbon atoms (i.e., C3-12cycloalkyl), 3 to 12 ring carbon atoms (i.e., C3-12cycloalkyl), 3 to 10 ring carbon atoms (i.e., C3-10cycloalkyl), 3 to 8 ring carbon atoms (i.e., C3-8cycloalkyl), or 3 to 6 ring carbon atoms (i.e.,C3-6cycloalkyl). Monocyclic groups include, for example, cyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl, cycloheptyl, and cyclooctyl. Polycyclic groups include, for example, bicyclo[2.2.1]heptanyl, bicyclo[2.2.2]octanyl, adamantyl, norbornyl, decalinyl, 7,7-dimethyl-bicyclo[2.2.1]heptanyl, and the like. Further, the term cycloalkyl is intended to encompass any non-aromatic ring which may be fused to an aryl ring, regardless of the attachment to the remainder of the molecule. Still further, cycloalkyl also includes “spirocycloalkyl” when there are two positions for substitution on the same carbon atom, for example spiro[2.5]octanyl, spiro[4.5]decanyl, or spiro[5.5]undecanyl.
[0034] “Cycloalkylalkyl” refers to the group “cycloalkyl-alkyl-”.
[0035] “Imino” refers to a group -C(NRy)Rz, wherein Ryand Rzare each independently hydrogen, alkyl, alkenyl, alkynyl, cycloalkyl, heterocyclyl, aryl, heteroalkyl, or heteroaryl; each of which may be optionally substituted, as defined herein.
[0036] “Imido” refers to a group -C(O)NRyC(O)Rz, wherein Ryand Rzare each independently hydrogen, alkyl, alkenyl, alkynyl, cycloalkyl, heterocyclyl, aryl, heteroalkyl, or heteroaryl; each of which may be optionally substituted, as defined herein.
[0037] “Halogen” or “halo” refers to atoms occupying group VIIA of the periodic table, such as fluoro, chloro, bromo, or iodo.
[0038] “Haloalkyl” refers to an unbranched or branched alkyl group as defined above, wherein one or more (e.g., 1 to 6 or 1 to 3) hydrogen atoms are replaced by a halogen. For example, where a residue is substituted with more than one halogen, it may be referred to by using a prefix corresponding to the number of halogen moieties attached. Dihaloalkyl and trihaloalkyl refer to alkyl substituted with two (“di”) or three (“tri”) halo groups, which may be, but are not necessarily, the same halogen. Examples of haloalkyl include, e.g., trifluoromethyl, difluoromethyl, fluoromethyl, trichloromethyl, 2,2,2-trifluoroethyl, 1,2-difluoroethyl, 3-bromo-2-fluoropropyl, 1,2-dibromoethyl, and the like.
[0039] “Haloalkoxy” refers to an alkoxy group as defined above, wherein one or more (e.g., 1 to 6 or 1 to 3) hydrogen atoms are replaced by a halogen.
[0040] “Haloalkoxyalkyl” refers to an alkoxyalkyl group as defined above, wherein one or more (e.g., 1 to 6 or 1 to 3) hydrogen atoms are replaced by a halogen.
[0041] “Hydroxyalkyl” refers to an alkyl group as defined above, wherein one or more (e.g., 1 to 6 or 1 to 3) hydrogen atoms are replaced by a hydroxy group.
[0042] “Heteroalkyl” refers to an alkyl group in which one or more of the carbon atoms (and any associated hydrogen atoms), excluding any terminal carbon atom(s), are each independently replaced with the same or different heteroatomic group, provided the point of attachment to the remainder of the molecule is through a carbon atom. The term “heteroalkyl” includes unbranched or branched saturated chain having carbon and heteroatoms. By way of example, 1, 2, or 3 carbon atoms may be independently replaced with the same or different heteroatomic group. Heteroatomic groups include, but are not limited to, -NRy-, -O-, -S-, -S(O)-, -S(O)2-, and the like, wherein Ryis hydrogen, alkyl, alkenyl, alkynyl, cycloalkyl, heterocyclyl, aryl, heteroalkyl, or heteroaryl; each of which may be optionally substituted, asdefined herein. Examples of heteroalkyl groups include, e.g., ethers (e.g., -CH2OCH3, -CH(CH3)OCH3, -CH2CH2OCH3, -CH2CH2OCH2CH2OCH3, etc.), thioethers (e.g., -CH2SCH3, -CH(CH3)SCH3, -CH2CH2SCH3, -CH2CH2SCH2CH2SCH3, etc.), sulfones (e.g., -CH2S(O)2CH3, -CH(CH3)S(O)2CH3, -CH2CH2S(O)2CH3, -CH2CH2S(O)2CH2CH2OCH3, etc.), and amines (e.g., -CH2NRyCH3, -CH(CH3)NRyCH3, -CH2CH2NRyCH3, -CH2CH2NRyCH2CH2NRyCH3, etc., where Ryis hydrogen, alkyl, alkenyl, alkynyl, cycloalkyl, heterocyclyl, aryl, heteroalkyl, or heteroaryl; each of which may be optionally substituted, as defined herein). As used herein, heteroalkyl includes 2 to 10 carbon atoms, 2 to 8 carbon atoms, or 2 to 4 carbon atoms; and 1 to 3 heteroatoms, 1 to 2 heteroatoms, or 1 heteroatom.
[0043] “Heteroaryl” refers to an aromatic group having a single ring or multiple fused rings, with one or more ring heteroatoms independently selected from nitrogen, oxygen, and sulfur. As used herein, heteroaryl includes 1 to 20 ring carbon atoms (i.e., C1-20 heteroaryl), 3 to 12 ring carbon atoms (i.e., C3-12 heteroaryl), or 3 to 8 carbon ring atoms (i.e., C3-8 heteroaryl), and 1 to 5 ring heteroatoms, 1 to 4 ring heteroatoms, 1 to 3 ring heteroatoms, 1 to 2 ring heteroatoms, or 1 ring heteroatom independently selected from nitrogen, oxygen, and sulfur. In certain instances, heteroaryl includes 5-10 membered ring systems, 5-7 membered ring systems, or 5-6 membered ring systems, each independently having 1 to 4 ring heteroatoms, 1 to 3 ring heteroatoms, 1 to 2 ring heteroatoms, or 1 ring heteroatom independently selected from nitrogen, oxygen, and sulfur. Examples of heteroaryl groups include, e.g., acridinyl, benzimidazolyl, benzothiazolyl, benzindolyl, benzofuranyl, benzothiazolyl, benzothiadiazolyl, benzonaphthofuranyl, benzoxazolyl, benzothienyl (benzothiophenyl), benzotriazolyl, benzo[4,6]imidazo[1,2-a]pyridyl, carbazolyl, cinnolinyl, dibenzofuranyl, dibenzothiophenyl, furanyl, isothiazolyl, imidazolyl, indazolyl, indolyl, indazolyl, isoindolyl, isoquinolyl, isoxazolyl, naphthyridinyl, oxadiazolyl, oxazolyl, 1-oxidopyridinyl, 1-oxidopyrimidinyl, 1-oxidopyrazinyl, 1-oxidopyridazinyl, phenazinyl, phthalazinyl, pteridinyl, purinyl, pyrrolyl, pyrazolyl, pyridinyl, pyrazinyl, pyrimidinyl, pyridazinyl, quinazolinyl, quinoxalinyl, quinolinyl, quinuclidinyl, isoquinolinyl, thiazolyl, thiadiazolyl, triazolyl, tetrazolyl, and triazinyl. Examples of the fused-heteroaryl rings include, but are not limited to, benzo[d]thiazolyl, quinolinyl, isoquinolinyl, benzo[b]thiophenyl, indazolyl, benzo[d]imidazolyl, pyrazolo[1,5-a]pyridinyl, and imidazo[1,5-a]pyridinyl, where the heteroaryl can be bound via either ring of the fused system. Any aromatic ring, having a single or multiple fused rings, containing at least one heteroatom, is considered a heteroaryl regardless of the attachment to the remainder of the molecule (i.e., through any one of the fused rings). Heteroaryl does not encompass or overlap with aryl as defined above.
[0044] “Heteroarylalkyl” refers to the group “heteroaryl-alkyl-”.
[0045] “Heterocyclyl” refers to a saturated or partially unsaturated cyclic alkyl group, with one or more ring heteroatoms independently selected from nitrogen, oxygen, and sulfur. The term “heterocyclyl” includes heterocycloalkenyl groups (i.e., the heterocyclyl group having at least one double bond), bridged-heterocyclyl groups, fused-heterocyclyl groups, and spiro-heterocyclyl groups. A heterocyclyl may be a single ring or multiple rings wherein the multiple rings may be fused, bridged, or spiro, andmay comprise one or more (e.g., 1 to 3) oxo (=O) or N-oxide (-O-) moieties. Any non-aromatic ring containing at least one heteroatom is considered a heterocyclyl, regardless of the attachment (i.e., can be bound through a carbon atom or a heteroatom). Further, the term heterocyclyl is intended to encompass any non-aromatic ring containing at least one heteroatom, which ring may be fused to a cycloalkyl, an aryl, or heteroaryl ring, regardless of the attachment to the remainder of the molecule. As used herein, heterocyclyl has 2 to 20 ring carbon atoms (i.e., C2-20heterocyclyl), 2 to 12 ring carbon atoms (i.e., C2-12heterocyclyl), 2 to 10 ring carbon atoms (i.e., C2-10 heterocyclyl), 2 to 8 ring carbon atoms (i.e., C2-8 heterocyclyl), 3 to 12 ring carbon atoms (i.e., C3-12 heterocyclyl), 3 to 8 ring carbon atoms (i.e., C3-8 heterocyclyl), or 3 to 6 ring carbon atoms (i.e., C3-6 heterocyclyl); having 1 to 5 ring heteroatoms, 1 to 4 ring heteroatoms, 1 to 3 ring heteroatoms, 1 to 2 ring heteroatoms, or 1 ring heteroatom independently selected from nitrogen, sulfur, or oxygen. Examples of heterocyclyl groups include, e.g., azetidinyl, azepinyl, benzodioxolyl, benzo[b][1,4]dioxepinyl, 1,4-benzodioxanyl, benzopyranyl, benzodioxinyl, benzopyranonyl, benzofuranonyl, dioxolanyl, dihydropyranyl, hydropyranyl, thienyl[1,3]dithianyl, decahydroisoquinolyl, furanonyl, imidazolinyl, imidazolidinyl, indolinyl, indolizinyl, isoindolinyl, isothiazolidinyl, isoxazolidinyl, morpholinyl, octahydroindolyl, octahydroisoindolyl, 2-oxopiperazinyl, 2-oxopiperidinyl, 2-oxopyrrolidinyl, oxazolidinyl, oxiranyl, oxetanyl, phenothiazinyl, phenoxazinyl, piperidinyl, piperazinyl, 4-piperidonyl, pyrrolidinyl, pyrazolidinyl, quinuclidinyl, thiazolidinyl, tetrahydrofuryl, tetrahydropyranyl, trithianyl, tetrahydroquinolinyl, thiophenyl (i.e., thienyl), thiomorpholinyl, thiamorpholinyl, 1-oxo-thiomorpholinyl, and 1,1-dioxo-thiomorpholinyl. The term “heterocyclyl” also includes “spiroheterocyclyl” when there are two positions for substitution on the same carbon atom. Examples of the spiro-heterocyclyl rings include, e.g., bicyclic and tricyclic ring systems, such as oxabicyclo[2.2.2]octanyl, 2-oxa-7-azaspiro[3.5]nonanyl, 2-oxa-6-azaspiro[3.4]octanyl, and 6-oxa-1-azaspiro[3.3]heptanyl. Examples of the fused-heterocyclyl rings include, but are not limited to, 1,2,3,4-tetrahydroisoquinolinyl, 4,5,6,7-tetrahydrothieno[2,3-c]pyridinyl, indolinyl, and isoindolinyl, where the heterocyclyl can be bound via either ring of the fused system.
[0046] “Heterocyclylalkyl” refers to the group “heterocyclyl-alkyl-.”
[0047] “Oxime” refers to the group -CRy(=NOH) wherein Ryis hydrogen, alkyl, alkenyl, alkynyl, cycloalkyl, heterocyclyl, aryl, heteroalkyl, or heteroaryl; each of which may be optionally substituted, as defined herein.
[0048] “Sulfonyl” refers to the group -S(O)2Ry, where Ryis hydrogen, alkyl, alkenyl, alkynyl, cycloalkyl, heterocyclyl, aryl, heteroalkyl, or heteroaryl; each of which may be optionally substituted, as defined herein. Examples of sulfonyl are methylsulfonyl, ethylsulfonyl, phenylsulfonyl, and toluenesulfonyl.
[0049] “Sulfinyl” refers to the group -S(O)Ry, where Ryis hydrogen, alkyl, alkenyl, alkynyl, cycloalkyl, heterocyclyl, aryl, heteroalkyl, or heteroaryl; each of which may be optionally substituted, as defined herein. Examples of sulfinyl are methylsulfinyl, ethylsulfinyl, phenylsulfinyl, and toluenesulfinyl.
[0050] “Sulfonamido” refers to the groups -SO2NRyRzand -NRySO2Rz, where Ryand Rzare each independently hydrogen, alkyl, alkenyl, alkynyl, cycloalkyl, heterocyclyl, aryl, heteroalkyl, or heteroaryl; each of which may be optionally substituted, as defined herein.
[0051] The terms “optional” or “optionally” means that the subsequently described event or circumstance may or may not occur and that the description includes instances where said event or circumstance occurs and instances in which it does not. Also, the term “optionally substituted” refers to any one or more (e.g., 1 to 5 or 1 to 3) hydrogen atoms on the designated atom or group may or may not be replaced by a moiety other than hydrogen.
[0052] The term “substituted” used herein means any of the above groups (i.e., alkyl, alkenyl, alkynyl, alkylene, alkoxy, haloalkyl, haloalkoxy, cycloalkyl, aryl, heterocyclyl, heteroaryl, and / or heteroalkyl) wherein at least one (e.g., 1 to 5 or 1 to 3) hydrogen atom is replaced by a bond to a non-hydrogen atom such as, but not limited to alkyl, alkenyl, alkynyl, alkoxy, alkylthio, acyl, amido, amino, amidino, aryl, aralkyl, azido, carbamoyl, carboxyl, carboxyl ester, cyano, cycloalkyl, cycloalkylalkyl, guanadino, halo, haloalkyl, haloalkoxy, hydroxyalkyl, heteroalkyl, heteroaryl, heteroarylalkyl, heterocyclyl, heterocyclylalkyl, -NHNH2, =NNH2, imino, imido, hydroxy, oxo, oxime, nitro, sulfonyl, sulfinyl, alkylsulfonyl, alkylsulfinyl, thiocyanate, -S(O)OH, -S(O)2OH, sulfonamido, thiol, thioxo, N-oxide, or - Si(Ry)3, wherein each Ryis independently hydrogen, alkyl, alkenyl, alkynyl, heteroalkyl, cycloalkyl, aryl, heteroaryl, or heterocyclyl.
[0053] In certain embodiments, “substituted” includes any of the above alkyl, alkenyl, alkynyl, cycloalkyl, heterocyclyl, aryl, or heteroaryl groups in which one or more (e.g., 1 to 5 or 1 to 3) hydrogen atoms are independently replaced with deuterium, halo, cyano, nitro, azido, oxo, alkyl, alkenyl, alkynyl, haloalkyl, cycloalkyl, heterocyclyl, aryl, heteroaryl, -NRgRh, -NRgC(O)Rh, -NRgC(O)NRgRh, -NRgC(O)ORh, -NRgS(O)1-2Rh, -C(O)Rg, -C(O)ORg, -OC(O)ORg, -OC(O)Rg, -C(O)NRgRh, -OC(O)NRgRh, -ORg, -SRg, -S(O)Rg, -S(O)2Rg, -OS(O)1-2Rg, -S(O)1-2ORg, -NRgS(O)1-2NRgRh, =NSO2Rg, =NORg, -S(O)1-2NRgRh, -SF5, -SCF3, or -OCF3. In certain embodiments, “substituted” also means any of the above groups in which one or more (e.g., 1 to 5 or 1 to 3) hydrogen atoms are replaced with -C(O)Rg, -C(O)ORg, -C(O)NRgRh, -CH2SO2Rg, or -CH2SO2NRgRh. In the foregoing, Rgand Rhare the same or different and independently hydrogen, alkyl, alkenyl, alkynyl, alkoxy, thioalkyl, aryl, aralkyl, cycloalkyl, cycloalkylalkyl, haloalkyl, heterocyclyl, heterocyclylalkyl, heteroaryl, and / or heteroarylalkyl. In certain embodiments, “substituted” also means any of the above groups in which one or more (e.g., 1 to 5 or 1 to 3) hydrogen atoms are replaced by a bond to an amino, cyano, hydroxy, imino, nitro, oxo, thioxo, halo, alkyl, alkoxy, alkylamino, thioalkyl, aryl, aralkyl, cycloalkyl, cycloalkylalkyl, haloalkyl, heterocyclyl, N- heterocyclyl, heterocyclylalkyl, heteroaryl, and / or heteroarylalkyl, or two of Rgand Rhand Riare taken together with the atoms to which they are attached to form a heterocyclyl ring optionally substituted with oxo, halo, or alkyl optionally substituted with oxo, halo, amino, hydroxy, or alkoxy.
[0054] Polymers or similar indefinite structures arrived at by defining substituents with further substituents appended ad infinitum (e.g., a substituted aryl having a substituted alkyl which is itselfsubstituted with a substituted aryl group, which is further substituted by a substituted heteroalkyl group, etc.) are not intended for inclusion herein. Unless otherwise noted, the maximum number of serial substitutions in compounds described herein is three. For example, serial substitutions of substituted aryl groups with two other substituted aryl groups are limited to ((substituted aryl)substituted aryl) substituted aryl. Similarly, the above definitions are not intended to include impermissible substitution patterns (e.g., methyl substituted with 5 fluorines or heteroaryl groups having two adjacent oxygen ring atoms). Such impermissible substitution patterns are well known to the skilled artisan. When used to modify a chemical group, the term “substituted” may describe other chemical groups defined herein.
[0055] In certain embodiments, as used herein, the phrase “one or more” refers to one to five. In certain embodiments, as used herein, the phrase “one or more” refers to one to three.
[0056] Any compound or structure given herein, is also intended to represent unlabeled forms as well as isotopically labeled forms of the compounds. These forms of compounds may also be referred to as “isotopically enriched analogs.” Isotopically labeled compounds have structures depicted herein, except that one or more atoms are replaced by an atom having a selected atomic mass or mass number. Examples of isotopes that can be incorporated into the disclosed compounds include isotopes of hydrogen, carbon, nitrogen, oxygen, phosphorous, fluorine, chlorine, and iodine, such as2H,3H,11C,13C,14C,13N,15N,15O,17O,18O,31P,32P,35S,18F,36Cl,123I, and125I, respectively. Various isotopically labeled compounds of the present disclosure, for example those into which radioactive isotopes such as3H and14C are incorporated. Such isotopically labelled compounds may be useful in metabolic studies, reaction kinetic studies, detection or imaging techniques, such as positron emission tomography (PET) or single- photon emission computed tomography (SPECT) including drug or substrate tissue distribution assays or in radioactive treatment of patients.
[0057] The term “isotopically enriched analogs” includes “deuterated analogs” of compounds described herein in which one or more hydrogens is / are replaced by deuterium, such as a hydrogen on a carbon atom. Such compounds exhibit increased resistance to metabolism and are thus useful for increasing the half-life of any compound when administered to a mammal, particularly a human. See, for example, Foster, “Deuterium Isotope Effects in Studies of Drug Metabolism,” Trends Pharmacol. Sci.5(12):524- 527 (1984). Such compounds are synthesized by means well known in the art, for example by employing starting materials in which one or more hydrogens have been replaced by deuterium.
[0058] Deuterium labelled or substituted therapeutic compounds of the disclosure may have improved DMPK (drug metabolism and pharmacokinetics) properties, relating to distribution, metabolism, and excretion (ADME). Substitution with heavier isotopes such as deuterium may afford certain therapeutic advantages resulting from greater metabolic stability, for example increased in vivo half-life, reduced dosage requirements, and / or an improvement in therapeutic index. An18F,3H,11C labeled compound may be useful for PET or SPECT or other imaging studies. Isotopically labeled compounds of this disclosure and prodrugs thereof can generally be prepared by carrying out the procedures disclosed in the schemes or in the examples and preparations described below by substituting a readily availableisotopically labeled reagent for a non-isotopically labeled reagent. It is understood that deuterium in this context is regarded as a substituent in a compound described herein.
[0059] The concentration of such a heavier isotope, specifically deuterium, may be defined by an isotopic enrichment factor. In the compounds of this disclosure any atom not specifically designated as a particular isotope is meant to represent any stable isotope of that atom. Unless otherwise stated, when a position is designated specifically as “H” or “hydrogen”, the position is understood to have hydrogen at its natural abundance isotopic composition. Accordingly, in the compounds of this disclosure any atom specifically designated as a deuterium (D) is meant to represent deuterium.
[0060] In many cases, the compounds of this disclosure are capable of forming acid and / or base salts by virtue of the presence of amino, and / or carboxyl groups, or groups similar thereto.
[0061] Provided are also or a pharmaceutically acceptable salt, isotopically enriched analog, deuterated analog, stereoisomer, mixture of stereoisomers, and prodrugs of the compounds described herein. “Pharmaceutically acceptable” or “physiologically acceptable” refer to compounds, salts, compositions, dosage forms, and other materials which are useful in preparing a pharmaceutical composition that is suitable for veterinary or human pharmaceutical use.
[0062] The term “pharmaceutically acceptable salt” of a given compound refers to salts that retain the biological effectiveness and properties of the given compound and which are not biologically or otherwise undesirable. “Pharmaceutically acceptable salts” or “physiologically acceptable salts” include, for example, salts with inorganic acids, and salts with an organic acid. In addition, if the compounds described herein are obtained as an acid addition salt, the free base can be obtained by basifying a solution of the acid salt. Conversely, if the product is a free base, an addition salt, particularly a pharmaceutically acceptable addition salt, may be produced by dissolving the free base in a suitable organic solvent and treating the solution with an acid, in accordance with conventional procedures for preparing acid addition salts from base compounds. Those skilled in the art will recognize various synthetic methodologies that may be used to prepare nontoxic pharmaceutically acceptable addition salts. Pharmaceutically acceptable acid addition salts may be prepared from inorganic or organic acids. Salts derived from inorganic acids include, e.g., hydrochloric acid, hydrobromic acid, sulfuric acid, nitric acid, phosphoric acid, and the like. Salts derived from organic acids include, e.g., acetic acid, propionic acid, gluconic acid, glycolic acid, pyruvic acid, oxalic acid, malic acid, malonic acid, succinic acid, maleic acid, fumaric acid, tartaric acid, citric acid, benzoic acid, cinnamic acid, mandelic acid, methanesulfonic acid, ethanesulfonic acid, p-toluene-sulfonic acid, salicylic acid, and the like. Likewise, pharmaceutically acceptable base addition salts can be prepared from inorganic or organic bases. Salts derived from inorganic bases include, by way of example only, sodium, potassium, lithium, aluminum, ammonium, calcium, and magnesium salts. Salts derived from organic bases include, but are not limited to, salts of primary, secondary, and tertiary amines, such as alkyl amines (i.e., NH2(alkyl)), dialkyl amines (i.e., HN(alkyl)2), trialkyl amines (i.e., N(alkyl)3), substituted alkyl amines (i.e., NH2(substituted alkyl)), di(substituted alkyl) amines (i.e., HN(substituted alkyl)2), tri(substituted alkyl) amines (i.e., N(substitutedalkyl)3), alkenyl amines (i.e., NH2(alkenyl)), dialkenyl amines (i.e., HN(alkenyl)2), trialkenyl amines (i.e., N(alkenyl)3), substituted alkenyl amines (i.e., NH2(substituted alkenyl)), di(substituted alkenyl) amines (i.e., HN(substituted alkenyl)2), tri(substituted alkenyl) amines (i.e., N(substituted alkenyl)3, mono-, di- or tri- cycloalkyl amines (i.e., NH2(cycloalkyl), HN(cycloalkyl)2, N(cycloalkyl)3), mono-, di- or tri- arylamines (i.e., NH2(aryl), HN(aryl)2, N(aryl)3), or mixed amines, etc. Specific examples of suitable amines include, by way of example only, isopropylamine, trimethyl amine, diethyl amine, tri(iso-propyl) amine, tri(n-propyl) amine, ethanolamine, 2-dimethylaminoethanol, piperazine, piperidine, morpholine, N-ethylpiperidine, and the like.
[0063] Some of the compounds exist as tautomers. Tautomers are in equilibrium with one another. For example, amide containing compounds may exist in equilibrium with imidic acid tautomers. Regardless of which tautomer is shown and regardless of the nature of the equilibrium among tautomers, the compounds are understood by one of ordinary skill in the art to comprise both amide and imidic acid tautomers. Thus, the amide containing compounds are understood to include their imidic acid tautomers. Likewise, the imidic acid containing compounds are understood to include their amide tautomers.
[0064] The compounds of the disclosure, or their pharmaceutically acceptable salts include an asymmetric center and may thus give rise to enantiomers, diastereomers, and other stereoisomeric forms that may be defined, in terms of absolute stereochemistry, as (R)- or (S)- or, as (D)- or (L)- for amino acids. The present disclosure is meant to include all such possible isomers, as well as their racemic and optically pure forms. Optically active (+) and (-), (R)- and (S)-, or (D)- and (L)- isomers may be prepared using chiral synthons or chiral reagents, or resolved using conventional techniques, for example, chromatography and / or fractional crystallization. Conventional techniques for the preparation / isolation of individual enantiomers include chiral synthesis from a suitable optically pure precursor or resolution of the racemate (or the racemate of a salt or derivative) using, for example, chiral high pressure liquid chromatography (HPLC). When the compounds described herein contain olefinic double bonds or other centers of geometric asymmetry, and unless specified otherwise, it is intended that the compounds include both E and Z geometric isomers.
[0065] A “stereoisomer” refers to a compound made up of the same atoms bonded by the same bonds but having different three-dimensional structures, which are not interchangeable. The present disclosure contemplates various stereoisomers, or mixtures thereof, and includes “enantiomers,” which refers to two stereoisomers whose molecules are nonsuperimposeable mirror images of one another.
[0066] “Diastereomers” are stereoisomers that have at least two asymmetric atoms, but which are not mirror-images of each other.
[0067] Relative centers of the compounds as depicted herein are indicated graphically using the “thick bond” style (bold or parallel lines) and absolute stereochemistry is depicted using wedge bonds (bold or parallel lines).
[0068] “Prodrugs” means any compound which releases an active parent drug according to a structure described herein in vivo when such prodrug is administered to a mammalian subject. Prodrugs of acompound described herein are prepared by modifying functional groups present in the compound described herein in such a way that the modifications may be cleaved in vivo to release the parent compound. Prodrugs may be prepared by modifying functional groups present in the compounds in such a way that the modifications are cleaved, either in routine manipulation or in vivo, to the parent compounds. Prodrugs include compounds described herein wherein a hydroxy, amino, carboxyl, or sulfhydryl group in a compound described herein is bonded to any group that may be cleaved in vivo to regenerate the free hydroxy, amino, or sulfhydryl group, respectively. Examples of prodrugs include, but are not limited to esters (e.g., acetate, formate, and benzoate derivatives), amides, guanidines, carbamates (e.g., N,N-dimethylaminocarbonyl) of hydroxy functional groups in compounds described herein, and the like. Preparation, selection, and use of prodrugs is discussed in T. Higuchi and V. Stella, “Pro-drugs as Novel Delivery Systems,” Vol.14 of the A.C.S. Symposium Series; “Design of Prodrugs,” ed. H. Bundgaard, Elsevier, 1985; and in Bioreversible Carriers in Drug Design, ed. Edward B. Roche, American Pharmaceutical Association and Pergamon Press, 1987, each of which are hereby incorporated by reference in their entirety. 2. Compounds
[0069] Provided herein are compounds that are modulators of NLRP3. In certain embodiments, provided is a compound of Formula I:or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof, wherein: X is O or S; Y is O or S; A1, A2, A3, and A4are each independently N, CH, or CR1; provided at least one of A1, A2, A3, and A4is CR1; each R1is independently halo, cyano, -NO2, -SF5, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C3-10cycloalkyl, heterocyclyl, aryl, heteroaryl, -N(R11)2, -OR11, -C(O)R11, -C(O)OR11, -S(O)0-2R11, -NR11S(O)0-2-R11, -S(O)0-2N(R11)2, -NR11S(O)0-2N(R11)2, -NR11C(O)N(R11)2, -C(O)N(R11)2, -NR11C(O)R11, -OC(O)N(R11)2, or -NR11C(O)OR11; wherein each C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl is independently optionally substituted with one to eight Z1; or any two adjacent R1together with the atoms to which they are attached form a cycloalkyl, heterocyclyl, aryl, or heteroaryl ring; wherein the cycloalkyl, heterocyclyl, aryl, or heteroaryl is independently optionally substituted with one to eight Z1;R2is C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C3-10cycloalkyl, heterocyclyl, aryl, heteroaryl, -NO2, -SF5, -OR11, -N(R11)2, -C(O)R11, -C(O)OR11, -S(O)0-2-R11, -NR11S(O)0-2-R11, -S(O)0-2N(R11)2, -NR11S(O)0-2N(R11)2, -NR11C(O)N(R11)2, -NR11C(O)OR11, -NR11C(O)R11, -OC(O)R11, -OC(O)N(R11)2, -C(O)N(R11)2, halo, or cyano; wherein the C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl is optionally substituted with one to eight Z1; R3is hydrogen, halo, cyano, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl; wherein the C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl is optionally substituted with one to eight Z1; or R2and R3together form a C3-10cycloalkyl or heterocyclyl ring; wherein the C3-10cycloalkyl or heterocyclyl is optionally substituted with one to eight Z1; R4is hydrogen, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl; wherein the C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl is optionally substituted with one to eight Z1; or R5is C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl; wherein the C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl is optionally substituted with one to eight Z1; or R4and R5together form a heterocyclyl or heteroaryl ring optionally substituted with one to eight Z1; R6is hydrogen, halo, cyano, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C2-6heteroalkyl, C3-10cycloalkyl, or heterocyclyl; wherein the C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C2-6heteroalkyl, C3-10cycloalkyl, or heterocyclyl may further be optionally substituted with one to five Z1b; R7is hydrogen, halo, cyano, hydroxy, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C2-6heteroalkyl, C3-10cycloalkyl, or heterocyclyl; wherein the C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C2-6heteroalkyl, C3-10cycloalkyl, or heterocyclyl, or may further be optionally substituted with one to five Z1b; or R6and R7join to form a C3-10cycloalkyl or heterocyclyl ring; wherein the C3-10cycloalkyl or heterocyclyl ring may further be optionally substituted with one to five Z1b; R9and R10are each independently hydrogen, halo, cyano, C1-6alkyl, or C1-6haloalkyl, wherein each C1-6alkyl or C1-6haloalkyl is independently optionally substituted with one to five Z1; or R9and R10together form a C3-10cycloalkyl or heterocyclyl ring; wherein the C3-10cycloalkyl or heterocyclyl is optionally substituted with one to eight Z1; each Z1is independently halo, cyano, -NO2, -SF5, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C3-10cycloalkyl, heterocyclyl, aryl, heteroaryl, -N(R11)2, -OR11, -C(O)R11, -C(O)OR11, -S(O)0-2R11, -NR11S(O)0-2-R11, -S(O)0-2N(R11)2, -NR11S(O)0-2N(R11)2, -NR11C(O)N(R11)2, -C(O)N(R11)2, -NR11C(O)R11, -OC(O)N(R11)2, or -NR11C(O)OR11; wherein each C1-6alkyl, C2-6alkenyl, C2-6alkynyl,C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl is independently optionally substituted with one to five Z1a; each R11is independently hydrogen, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl; wherein each C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl of R11is independently optionally substituted with one to five Z1a; each Z1ais independently hydroxy, halo, cyano, -NO2, -SF5, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C3-10cycloalkyl, heterocyclyl, aryl, heteroaryl, -N(R13)2, -OR13, -C(O)R13, -C(O)OR13, -S(O)0-2R13, -NR13S(O)0-2-R13, -S(O)0-2N(R13)2, -NR13S(O)0-2N(R13)2, -NR13C(O)N(R13)2, -C(O)N(R13)2, -NR13C(O)R13, -OC(O)N(R13)2, or -NR13C(O)OR13; wherein each C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl is independently optionally substituted with one to five Z1b; each R13is independently hydrogen, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl; wherein each C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl of R13is independently optionally substituted with one to five Z1b; each Z1bis independently halo, cyano, hydroxy, -SH, -NH2, -NO2, -SF5, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C3-10cycloalkyl, heterocyclyl, aryl, heteroaryl, -L-C1-6alkyl, -L-C2-6alkenyl, -L-C2-6alkynyl, -L-C1-6haloalkyl, -L-C3-10cycloalkyl, -L-heterocyclyl, -L-aryl, or -L-heteroaryl; and each L is independently -O-, -NH-, -S-, -S(O)-, -S(O)2-, -N(C1-6alkyl)-, -N(C2-6alkenyl)-, -N(C2-6alkynyl)-, -N(C1-6haloalkyl)-, -N(C3-10cycloalkyl)-, -N(heterocyclyl)-, -N(aryl)-, -N(heteroaryl)-, -C(O)-, -C(O)O-, -C(O)NH-, -C(O)N(C1-6alkyl)-, -C(O)N(C2-6alkenyl)-, -C(O)N(C2-6alkynyl)-, -C(O)N(C1-6haloalkyl)-, -C(O)N(C3-10cycloalkyl)-, -C(O)N(heterocyclyl)-, -C(O)N(aryl)-, -C(O)N(heteroaryl)-, -NHC(O)-, -NHC(O)O-, -NHC(O)NH-, -NHS(O)-, or -S(O)2NH-; wherein each C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C3-10cycloalkyl, heterocyclyl, aryl, and heteroaryl of Z1band L is further independently optionally substituted with one to five hydroxy, halo, cyano, hydroxy, -SH, -NH2, -NO2, -SF5, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C1-6alkoxy, C1-6haloalkoxy, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl.
[0070] In certain embodiments, provided is a compound of Formula I:or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof, wherein: X is O or S; Y is O or S;A1, A2, A3, and A4are each independently N, CH, or CR1; provided at least one of A1, A2, A3, and A4is CR1; each R1is independently halo, cyano, -NO2, -SF5, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C3-10cycloalkyl, heterocyclyl, aryl, heteroaryl, -N(R11)2, -OR11, -C(O)R11, -C(O)OR11, -S(O)0-2R11, -NR11S(O)0-2-R11, -S(O)0-2N(R11)2, -NR11S(O)0-2N(R11)2, -NR11C(O)N(R11)2, -C(O)N(R11)2, -NR11C(O)R11, -OC(O)N(R11)2, or -NR11C(O)OR11; wherein each C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl is independently optionally substituted with one to eight Z1; or any two adjacent R1together with the atoms to which they are attached form a cycloalkyl, heterocyclyl, aryl or heteroaryl ring; wherein the cycloalkyl, heterocyclyl, aryl, or heteroaryl is independently optionally substituted with one to eight Z1; R2is C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C3-10cycloalkyl, heterocyclyl, aryl, heteroaryl, -NO2, -SF5, -OR11, -N(R11)2, -C(O)R12, -C(O)OR11, -S(O)0-2-R11, -NR11S(O)0-2-R11, -NR11S(O)0-2N(R11)2, -NR11C(O)N(R11)2, -NR11C(O)OR11, -NR11C(O)R11, -OC(O)R11, -OC(O)N(R11)2, -C(O)N(R11)2, halo, or cyano; wherein the C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl is optionally substituted with one to eight Z1; R3is hydrogen, halo, cyano, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl; wherein the C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl is optionally substituted with one to eight Z1; or R2and R3together form a C3-10cycloalkyl or heterocyclyl ring; wherein the C3-10cycloalkyl or heterocyclyl is optionally substituted with one to eight Z1; R4is hydrogen, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl; wherein the C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl is optionally substituted with one to eight Z1; or R5is C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl; wherein the C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl is optionally substituted with one to eight Z1; or R4and R5together form a heterocyclyl or heteroaryl ring optionally substituted with one to eight Z1; R6is hydrogen, halo, cyano, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C2-6heteroalkyl, C3-10cycloalkyl, or heterocyclyl; wherein the C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C2-6heteroalkyl, C3-10cycloalkyl, or heterocyclyl may further be optionally substituted with one to five Z1b; R7is hydrogen, halo, cyano, hydroxy, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C2-6heteroalkyl, C3-10cycloalkyl, or heterocyclyl; wherein the C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C2-6heteroalkyl, C3-10cycloalkyl, or heterocyclyl, or may further be optionally substituted with one to five Z1b;or R6and R7join to form a C3-10cycloalkyl or heterocyclyl ring; wherein the C3-10cycloalkyl or heterocyclyl ring may further be optionally substituted with one to five Z1b; R9and R10are each independently hydrogen, halo, cyano, C1-6alkyl, or C1-6haloalkyl, wherein each C1-6alkyl or C1-6haloalkyl is independently optionally substituted with one to five Z1; or R9and R10together form a C3-10cycloalkyl or heterocyclyl ring; wherein the C3-10cycloalkyl or heterocyclyl is optionally substituted with one to eight Z1; each Z1is independently halo, cyano, -NO2, -SF5, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C3-10cycloalkyl, heterocyclyl, aryl, heteroaryl, -N(R11)2, -OR11, -C(O)R11, -C(O)OR11, -S(O)0-2R11, -NR11S(O)0-2-R11, -S(O)0-2N(R11)2, -NR11S(O)0-2N(R11)2, -NR11C(O)N(R11)2, -C(O)N(R11)2, -NR11C(O)R11, -OC(O)N(R11)2, or -NR11C(O)OR11; wherein each C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl is independently optionally substituted with one to five Z1a; each R11is independently hydrogen, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl; wherein each C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl of R11is independently optionally substituted with one to five Z1a; R12is C1-6alkyl, C2-6alkenyl, C2-6alkynyl, or C1-6haloalkyl; wherein each C1-6alkyl, C2-6alkenyl, C2-6alkynyl, or C1-6haloalkyl of R12is independently optionally substituted with one to five Z1a; each Z1ais independently hydroxy, halo, cyano, -NO2, -SF5, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C3-10cycloalkyl, heterocyclyl, aryl, heteroaryl, -N(R13)2, -OR13, -C(O)R13, -C(O)OR13, -S(O)0-2R13, -NR13S(O)0-2-R13, -S(O)0-2N(R13)2, -NR13S(O)0-2N(R13)2, -NR13C(O)N(R13)2, -C(O)N(R13)2, -NR13C(O)R13, -OC(O)N(R13)2, or -NR13C(O)OR13; wherein each C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl is independently optionally substituted with one to five Z1b; each R13is independently hydrogen, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl; wherein each C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl of R13is independently optionally substituted with one to five Z1b; each Z1bis independently halo, cyano, hydroxy, -SH, -NH2, -NO2, -SF5, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C3-10cycloalkyl, heterocyclyl, aryl, heteroaryl, -L-C1-6alkyl, -L-C2-6alkenyl, -L-C2-6alkynyl, -L-C1-6haloalkyl, -L-C3-10cycloalkyl, -L-heterocyclyl, -L-aryl, or -L-heteroaryl; and each L is independently -O-, -NH-, -S-, -S(O)-, -S(O)2-, -N(C1-6alkyl)-, -N(C2-6alkenyl)-, -N(C2-6alkynyl)-, -N(C1-6haloalkyl)-, -N(C3-10cycloalkyl)-, -N(heterocyclyl)-, -N(aryl)-, -N(heteroaryl)-, -C(O)-, -C(O)O-, -C(O)NH-, -C(O)N(C1-6alkyl)-, -C(O)N(C2-6alkenyl)-, -C(O)N(C2-6alkynyl)-, -C(O)N(C1-6haloalkyl)-, -C(O)N(C3-10cycloalkyl)-, -C(O)N(heterocyclyl)-, -C(O)N(aryl)-, -C(O)N(heteroaryl)-, -NHC(O)-, -NHC(O)O-, -NHC(O)NH-, -NHS(O)-, or -S(O)2NH-;wherein each C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C3-10cycloalkyl, heterocyclyl, aryl, and heteroaryl of Z1band L is further independently optionally substituted with one to five hydroxy, halo, cyano, hydroxy, -SH, -NH2, -NO2, -SF5, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C1-6alkoxy, C1-6haloalkoxy, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl.
[0071] In certain embodiments, X is O. In certain embodiments, Y is O. In certain embodiments, X is S. In certain embodiments, Y is S. In certain embodiments, X and Y are O. In certain embodiments, X is O and Y is S. In certain embodiments, X is S and Y is O. In certain embodiments, X and Y are S.
[0072] In certain embodiments, provided is a compound of Formula IA:or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof, wherein: A1, A2, A3, and A4are each independently N, CH, or CR1; provided at least one of A1, A2, A3, and A4is CR1; each R1is independently halo, cyano, -NO2, -SF5, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C3-10cycloalkyl, heterocyclyl, aryl, heteroaryl, -N(R11)2, -OR11, -C(O)R11, -C(O)OR11, -S(O)0-2R11, -NR11S(O)0-2-R11, -S(O)0-2N(R11)2, -NR11S(O)0-2N(R11)2, -NR11C(O)N(R11)2, -C(O)N(R11)2, -NR11C(O)R11, -OC(O)N(R11)2, or -NR11C(O)OR11; wherein each C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl is independently optionally substituted with one to eight Z1; or any two adjacent R1together with the atoms to which they are attached form a cycloalkyl, heterocyclyl, aryl or heteroaryl ring; wherein the cycloalkyl, heterocyclyl, aryl, or heteroaryl is independently optionally substituted with one to eight Z1; R2is C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C3-10cycloalkyl, heterocyclyl, aryl, heteroaryl, -NO2, -SF5, -OR11, -N(R11)2, -C(O)R12, -C(O)OR11, -S(O)0-2-R11, -NR11S(O)0-2-R11, -NR11S(O)0-2N(R11)2, -NR11C(O)N(R11)2, -NR11C(O)OR11, -NR11C(O)R11, -OC(O)R11, -OC(O)N(R11)2, -C(O)N(R11)2, halo, or cyano; wherein the C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl is optionally substituted with one to eight Z1; R3is hydrogen, halo, cyano, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl; wherein the C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl is optionally substituted with one to eight Z1; or R2and R3together form a C3-10cycloalkyl or heterocyclyl ring; wherein the C3-10cycloalkyl or heterocyclyl is optionally substituted with one to eight Z1;R4is hydrogen, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl; wherein the C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl is optionally substituted with one to eight Z1; or R5is C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl; wherein the C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl is optionally substituted with one to eight Z1; or R4and R5together form a heterocyclyl or heteroaryl ring optionally substituted with one to eight Z1; R6is hydrogen, halo, cyano, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C2-6heteroalkyl, C3-10cycloalkyl, or heterocyclyl; wherein the C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C2-6heteroalkyl, C3-10cycloalkyl, or heterocyclyl may further be optionally substituted with one to five Z1b; R7is hydrogen, halo, cyano, hydroxy, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C2-6heteroalkyl, C3-10cycloalkyl, or heterocyclyl; wherein the C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C2-6heteroalkyl, C3-10cycloalkyl, or heterocyclyl, or may further be optionally substituted with one to five Z1b; or R6and R7join to form a C3-10cycloalkyl or heterocyclyl ring; wherein the C3-10cycloalkyl or heterocyclyl ring may further be optionally substituted with one to five Z1b; R9and R10are each independently hydrogen, halo, cyano, C1-6alkyl, or C1-6haloalkyl, wherein each C1-6alkyl or C1-6haloalkyl is independently optionally substituted with one to five Z1; or R9and R10together form a C3-10cycloalkyl or heterocyclyl ring; wherein the C3-10cycloalkyl or heterocyclyl is optionally substituted with one to eight Z1; each Z1is independently halo, cyano, -NO2, -SF5, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C3-10cycloalkyl, heterocyclyl, aryl, heteroaryl, -N(R11)2, -OR11, -C(O)R11, -C(O)OR11, -S(O)0-2R11, -NR11S(O)0-2-R11, -S(O)0-2N(R11)2, -NR11S(O)0-2N(R11)2, -NR11C(O)N(R11)2, -C(O)N(R11)2, -NR11C(O)R11, -OC(O)N(R11)2, or -NR11C(O)OR11; wherein each C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl is independently optionally substituted with one to five Z1a; each R11is independently hydrogen, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl; wherein each C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl of R11is independently optionally substituted with one to five Z1a; R12is C1-6alkyl, C2-6alkenyl, C2-6alkynyl, or C1-6haloalkyl; wherein each C1-6alkyl, C2-6alkenyl, C2-6alkynyl, or C1-6haloalkyl of R12is independently optionally substituted with one to five Z1a; each Z1ais independently hydroxy, halo, cyano, -NO2, -SF5, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C3-10cycloalkyl, heterocyclyl, aryl, heteroaryl, -N(R13)2, -OR13, -C(O)R13, -C(O)OR13, -S(O)0-2R13, -NR13S(O)0-2-R13, -S(O)0-2N(R13)2, -NR13S(O)0-2N(R13)2, -NR13C(O)N(R13)2, -C(O)N(R13)2, -NR13C(O)R13, -OC(O)N(R13)2, or -NR13C(O)OR13; wherein each C1-6alkyl, C2-6alkenyl, C2-6alkynyl,C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl is independently optionally substituted with one to five Z1b; each R13is independently hydrogen, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl; wherein each C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl of R13is independently optionally substituted with one to five Z1b; each Z1bis independently halo, cyano, hydroxy, -SH, -NH2, -NO2, -SF5, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C3-10cycloalkyl, heterocyclyl, aryl, heteroaryl, -L-C1-6alkyl, -L-C2-6alkenyl, -L-C2-6alkynyl, -L-C1-6haloalkyl, -L-C3-10cycloalkyl, -L-heterocyclyl, -L-aryl, or -L-heteroaryl; and each L is independently -O-, -NH-, -S-, -S(O)-, -S(O)2-, -N(C1-6alkyl)-, -N(C2-6alkenyl)-, -N(C2-6alkynyl)-, -N(C1-6haloalkyl)-, -N(C3-10cycloalkyl)-, -N(heterocyclyl)-, -N(aryl)-, -N(heteroaryl)-, -C(O)-, -C(O)O-, -C(O)NH-, -C(O)N(C1-6alkyl)-, -C(O)N(C2-6alkenyl)-, -C(O)N(C2-6alkynyl)-, -C(O)N(C1-6haloalkyl)-, -C(O)N(C3-10cycloalkyl)-, -C(O)N(heterocyclyl)-, -C(O)N(aryl)-, -C(O)N(heteroaryl)-, -NHC(O)-, -NHC(O)O-, -NHC(O)NH-, -NHS(O)-, or -S(O)2NH-; wherein each C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C3-10cycloalkyl, heterocyclyl, aryl, and heteroaryl of Z1band L is further independently optionally substituted with one to five hydroxy, halo, cyano, hydroxy, -SH, -NH2, -NO2, -SF5, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C1-6alkoxy, C1-6haloalkoxy, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl.
[0073] In certain embodiments, A2, A3and A4are each independently N, CH, or CR1; and A1is CR1.
[0074] In certain embodiments, A1, A3and A4are each independently N, CH, or CR1; and A2is CR1.
[0075] In certain embodiments, A1, A2, and A4are each independently N, CH, or CR1; and A3is CR1.
[0076] In certain embodiments, A1, A2, and A3are each independently N, CH, or CR1; and A4is CR1.
[0077] In certain embodiments, at least one of A1, A2, A3, and A4is N.
[0078] In certain embodiments, A1, A2, A3, and A4are each independently CH or CR1.
[0079] In certain embodiments, A2, A3, and A4are each independently CH or CR1; and A1is CR1.
[0080] In certain embodiments, A1, A3, and A4are each independently CH or CR1; and A2is CR1.
[0081] In certain embodiments, A1, A2, and A4are each independently CH or CR1; and A3is CR1.
[0082] In certain embodiments, A1, A2, and A3are each independently CH or CR1; and A4is CR1.
[0083] In certain embodiments, provided is a compound represented by Formula IB:wherein R1, R2, R3, R4, R5, R6, R7, R9, and R10are each independently as defined herein.
[0084] In certain embodiments, R4is hydrogen or C1-6alkyl. In certain embodiments, R4is hydrogen or methyl. In certain embodiments, R4is hydrogen. In certain embodiments, R4is C1-6alkyl. In certain embodiments, R4is methyl.
[0085] In certain embodiments, R5is C1-6alkyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl; wherein the C1-6alkyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl is optionally substituted with one to eight Z1; or R4and R5together form a heterocyclyl or heteroaryl ring optionally substituted with one to eight Z1.
[0086] In certain embodiments, R5is C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl; wherein the C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl is independently optionally substituted with one to five Z1. In certain embodiments, R4is hydrogen; and R5is C1-6alkyl optionally substituted with one to eight Z1. In certain embodiments, R4is hydrogen; and R5is (1-(2,2-difluoroethyl)cyclobutyl)methyl, oxetan-3- ylmethyl, oxazol-2-ylmethyl, (1-methyl-1H-imidazol-2-yl)methyl, 2-(1H-imidazol-1-yl)ethyl, pyridin-4- ylmethyl, (1-methyl-1H-pyrazol-4-yl)methyl, (1-methyl-1H-pyrazol-5-yl)methyl, 2-morpholinoethyl, 2- (4-fluorophenyl)-2-hydroxyethyl, 3,3,3-trifluoropropyl, 2-cyanopropan-2-yl, 2-(methylsulfonamido)ethyl, (2-(trifluoromethyl)pyridin-3-yl)methyl, cyclobutylmethyl, 3-hydroxy-3- methylbutyl or 2-hydroxy-2-methyl-propyl. In certain embodiments, R4is hydrogen; and R5is 3- hydroxy-3-methylbutyl or 2-hydroxy-2-methyl-propyl.
[0087] In certain embodiments, R5is (1-(2,2-difluoroethyl)cyclobutyl)methyl, (1-methyl-1H-imidazol-2- yl)methyl, (1-methyl-1H-pyrazol-4-yl)methyl, (1-methyl-1H-pyrazol-5-yl)methyl, (1R,2R,4S)-7- oxabicyclo[2.2.1]heptan-2-yl, (1S,2R,4R)-7-oxabicyclo[2.2.1]heptan-2-yl, (2-(trifluoromethyl)pyridin-3- yl)methyl, [1,2,4]triazolo[1,5-a]pyridin-2-yl, [1,2,4]triazolo[4,3-a]pyridin-6-yl, [1,2,4]triazolo[1,5- a]pyrazin-2-yl, 7-chloro-[1,2,4]triazolo[1,5-a]pyridin-2-yl, 7-(trifluoromethyl)-[1,2,4]triazolo[1,5- a]pyridin-2-yl, 6-chloro-[1,2,4]triazolo[1,5-a]pyridin-2-yl, 6-fluoro-[1,2,4]triazolo[1,5-a]pyridin-2-yl, 6- methoxy-[1,2,4]triazolo[1,5-a]pyridin-2-yl, 1-(2-hydroxy-2-methylpropyl)cyclopropyl, 1-(2- methoxyethyl)-1H-pyrazol-4-yl, 1-(2-methoxyethyl)-3-piperidyl, 1-(6-chloropyridazin-3-yl)piperidin-4- yl, 1-(hydroxymethyl)cyclopropyl, 1-(methoxycarbonyl)piperidin-3-yl, 1,1-dioxidothietan-3-yl, 1,3,5- triazin-2-yl, 1,3-dimethyl-1H-pyrazol-5-yl, 1,6-naphthyridin-2-yl, 1,7-naphthyridin-6-yl, 1,8- naphthyridin-2-yl, 1-bicyclo[2.2.2]octanyl, 1-cyclobutylpiperidin-3-yl, 1-cyclopropylpiperidin-3-yl, 1- ethyl-6-oxo-3-piperidyl, 1-ethylpiperidin-3-yl, 1H-benzo[d][1,2,3]triazol-5-yl, 1H-benzo[d]imidazol-2- yl, 1H-benzo[d]imidazol-6-yl, 1H-indazol-3-yl, 1H-indazol-5-yl, 1H-indazol-6-yl, 1H-indol-6-yl, 1H- pyrrolo[2,3-b]pyridin-5-yl, 1-methyl-1H-1,2,4-triazol-5-yl, 1-methyl-1H-benzo[d]imidazol-5-yl, 1- methyl-1H-indazol-5-yl, 1-methyl-1H-pyrazolo[4,3-b]pyridin-5-yl, 1-methyl-2-oxabicyclo[2.1.1]hexan- 4-yl, 1-methyl-2-oxo-4-piperidyl, 1-methyl-5-oxo-pyrrolidin-3-yl, 1-methyl-6-oxo-3-piperidyl, 1-methyl- 6-oxo-3-pyridyl, 1-phenyl-1H-pyrazol-5-yl, 1-phenylcyclopropyl, 2-(1H-imidazol-1-yl)ethyl, 2-(4- fluorophenyl)-2-hydroxyethyl, 2-(difluoromethoxy)phenyl, 2-(methylsulfonamido)ethyl, 2- (methylsulfonyl)ethyl, 2,2-difluorobenzo[d][1,3]dioxol-5-yl, 2,3-dihydro-1H-inden-2-yl, 2,3- dihydrobenzofuran-5-yl, 2,6-dimethylpyrimidin-4-yl, 2-chloro-4-(methylsulfonyl)phenyl, 2- cyanopropan-2-yl, 2-cyclopropyltetrahydropyran-4-yl, 2-hydroxy-2-methyl-propyl, 2-methyl-2H- pyrazolo[4,3-b]pyridin-5-yl, 2-methylbenzo[d]thiazol-6-yl, 2-morpholinoethyl, 2-oxabicyclo[2.2.2]octan- 4-yl, 2-oxaspiro[3.3]heptan-6-yl, 3-(1-hydroxy-1-methyl-ethyl)-1-bicyclo[1.1.1]pentanyl, 3-(2-methylthiazol-4-yl)phenyl, 3-(difluoromethoxy)cyclobutyl, 3-(difluoromethyl)cyclobutyl, 3- (hydroxymethyl)cyclobutyl, 3-(trifluoromethyl)-1-bicyclo[1.1.1]pentanyl, 3-(trifluoromethyl)cyclobutyl, 3,3,3-trifluoropropyl, 3,3-difluorocyclobutyl, 3,4-dimethylisoxazol-5-yl, 3,5-difluoro-2-pyridyl, 3-cyano- 1-bicyclo[1.1.1]pentanyl, 3-cyanocyclobutyl, 3-cyclopropyl-1H-pyrazol-5-yl, 3-cyclopropyl-1-methyl- 1H-pyrazol-5-yl, 3-fluoro-5-(1H-pyrazol-1-yl)pyridin-2-yl, 3-fluoro-5-(trifluoromethyl)pyridin-2-yl, 3- fluoro-5-formylpyridin-2-yl, 3-fluoropyridin-4-yl, 3-hydroxy-3-(trifluoromethyl)cyclobutyl, 3-hydroxy- 3-methylbutyl, 3-hydroxy-3-methylcyclobutyl, 3-hydroxycyclohexyl, 3-methyl-1-phenyl-1H-pyrazol-5- yl, 3-methylcyclobutyl, 4-(1H-tetrazol-5-yl)phenyl, 4-(2-methylthiazol-4-yl)pyrimidin-2-yl, 4,4- difluorocyclohexyl, 4,5,6,7-tetrahydro-1H-indazol-6-yl, 4,5,6,7-tetrahydropyrazolo[1,5-a]pyridin-5-yl, 4,5-dimethylpyrimidin-2-yl, 4,6-dimethylpyridin-2-yl, 4-cyanopyrimidin-2-yl, 4-hydroxy-1- bicyclo[2.2.2]octanyl, 4-methylpyridin-2-yl, 5-(difluoromethoxy)-2-pyridyl, 5-(difluoromethyl)pyridin-2- yl, 5-(pyridin-2-yl)pyrimidin-2-yl, 5-(trifluoromethyl)pyrimidin-2-yl, 5-(difluoromethoxy)pyrimidin-2- yl, 5,7-dihydrofuro[3,4-d]pyrimidin-2-yl, 5-chloro-3-fluoropyridin-2-yl, 5-chloropyridin-2-yl, 5- chloropyrimidin-2-yl, 5-cyano-3-fluoropyridin-2-yl, 5-cyanobenzo[d]oxazol-2-yl, 5-cyanopyridin-2-yl, 5-cyanopyrimidin-2-yl, 5-cyclopropylpyrimidin-2-yl, 5-cyclobutylpyrimidin-2-yl, 5-ethylpyrimidin-2-yl, 5-fluoro-4-methylpyrimidin-2-yl, 5-cyano-4-methylpyrimidin-2-yl, 5-fluoropyridin-2-yl, 5- fluoropyrimidin-2-yl, 5-fluoropyrimidin-4-yl, 5-iodopyrimidin-2-yl, 5-methoxypyrimidin-2-yl, 5- methyl-2-oxo-1,2-dihydropyridin-3-yl, 5-methylpyrimidin-2-yl, 5-pyrazol-1-ylpyrimidin-2-yl, 5- (tetrahydrofuran-3-yl)pyrimidin-2-yl, 5-(1-methyl-1H-pyrazol-4-yl)pyrimidin-2-yl, 6,7-dihydro-5H- pyrrolo[1,2-b][1,2,4]triazol-2-yl, 5-fluorothiazol-2-yl, 6-chloropyridazin-3-yl, 6-fluorobenzo[d]oxazol-2- yl, 6-cyanobenzo[d]oxazol-2-yl, 6-methylpyrazin-2-yl, 6-methylpyridin-2-yl, 6-oxo-1,6- dihydropyrimidin-2-yl, benzo[d]oxazol-2-yl, benzo[d]oxazol-5-yl, benzo[d]thiazol-5-yl, benzo[d]thiazol- 6-yl, cyclobutylmethyl, imidazo[1,2-a]pyrazin-6-yl, imidazo[1,2-a]pyridin-5-yl, imidazo[1,2-a]pyridin-8- yl, imidazo[1,2-b]pyridazin-6-yl, imidazo[1,5-a]pyridin-6-yl, isoquinolin-4-yl, isoquinolin-6-yl, isoquinolin-7-yl, isoquinolin-8-yl, isoxazolo[4,5-b]pyridin-5-yl, isoxazolo[5,4-b]pyridin-6-yl, oxazol-2- ylmethyl, oxazolo[4,5-b]pyridin-2-yl, oxazolo[4,5-c]pyridin-2-yl, oxazolo[5,4-b]pyridin-2-yl, oxazolo[5,4-c]pyridin-2-yl, oxetan-3-ylmethyl, phenyl, pyrazolo[1,5-a]pyrimidin-5-yl, pyridin-4- ylmethyl, pyrimidin-2-yl, quinazolin-2-yl, quinolin-2-yl, quinolin-3-yl, quinolin-5-yl, quinolin-6-yl, spiro[2.3]hexan-5-yl, [1,2,4]triazolo[1,5-a]pyrazin-8-yl, [1,2,4]triazolo[4,3-a]pyrazin-8-yl, [1,3]thiazolo[5,4-d]pyrimidin-5-yl, 1-(1-methylpyrazol-3-yl)pyrrolidin-3-yl, 1-(1-methylpyrazol-4- yl)piperidin-3-yl, 1-(1-methylpyrazol-4-yl)pyrrolidin-3-yl, 1-(2,2,2-trifluoroethyl)-1,2,4-triazol-3-yl, 1- (2,2,2-trifluoroethyl)piperidin-4-yl, 1-(2,2-difluoroethyl)piperidin-4-yl, 1-(3,3,3- trifluoropropyl)piperidin-4-yl, 1-(oxetan-3-yl)piperidin-3-yl, 1-(oxetan-3-yl)pyrrolidin-3-yl, 1,2,4- benzotriazin-3-yl, 1,2-benzothiazol-6-yl, 1,2-benzoxazol-3-yl, 1,5-dimethyl-1,2,4-triazol-3-yl, 1,7- naphthyridin-8-yl, 1-azabicyclo[2.2.2]octan-3-yl, 1-benzylpyrrolidin-3-yl, 1-cyclopropyl-1,2,4-triazol-3- yl, 1-ethyl-1-azaspiro[3.3]heptan-6-yl, 1-ethylpyrrolidin-3-yl, 1-methyl-1,2,4-triazol-3-yl, 1-methyl-2- oxopyrrolidin-3-yl, 1-methyl-6-oxopyridazin-3-yl, 1-methylpiperidin-3-yl, 1-methylpyrazolo[3,4-d]pyrimidin-6-yl, 1-phenyl-1,2,4-triazol-3-yl, 1-propan-2-yl-1,2,4-triazol-3-yl, 1-pyridazin-3-ylpiperidin- 4-yl, 1-pyridin-2-ylpiperidin-4-yl, 1-pyridin-3-ylpiperidin-4-yl, 1-pyrimidin-2-ylpiperidin-4-yl, 2- methylimidazo[1,2-b]pyridazin-6-yl, 2-oxopyrrolidin-3-yl, 3-(1H-pyrazol-5-yl)cyclobutyl, 3- (methoxymethyl)cyclobutyl, 3-chloro-5-cyanopyridin-2-yl, 3-cyano-5-fluoropyridin-2-yl, 3-fluoro-5- methylpyridin-2-yl, 3-fluoroimidazo[1,2-a]pyridin-2-yl, 3-fluoropyrazolo[1,5-a]pyridin-2-yl, 3-methoxy- 3-methylcyclobutyl, 3-methoxypyridin-2-yl, 3-methylimidazo[1,2-b]pyridazin-6-yl, 3- methylpyrazolo[1,5-a]pyridin-2-yl, 3-phenylcyclobutyl, 3-phenylmethoxycyclobutyl, 4,4-dimethyl-5H- 1,3-oxazol-2-yl, 4,5,6,7-tetrahydro-1,3-benzoxazol-2-yl, 4-cyano-1,3-benzoxazol-2-yl, 4- methoxypyrimidin-2-yl, 4-methyl-3-oxopyrazin-2-yl, 4-methyl-4-azaspiro[2.5]octan-7-yl, 4-methyl-5- oxopyrazin-2-yl, 5-(2,2-difluorocyclopropyl)pyrimidin-2-yl, 5-(2,3-dihydrofuran-4-yl)pyrimidin-2-yl, 5- (difluoromethyl)-3-fluoropyridin-2-yl, 5-(methoxymethoxy)pyrimidin-2-yl, 5-(oxetan-3-yl)pyrimidin-2- yl, 5-(oxolan-2-yl)pyrimidin-2-yl, 5-(trifluoromethyl)-1,3-benzoxazol-2-yl, 5,5-dimethyl-4H-1,3-oxazol- 2-yl, 5,6,7,8-tetrahydro-[1,2,4]triazolo[1,5-a]pyridin-2-yl, 5,6-dihydrofuro[2,3-d]pyrimidin-2-yl, 5- cyano-3-fluoro-4-methylpyridin-2-yl, 5-cyano-3-fluoro-6-methylpyridin-2-yl, 5-cyano-3-methylpyridin- 2-yl, 5-fluoro-2-methoxypyrimidin-4-yl, 5-fluoro-6-methoxypyrimidin-4-yl, 5-methyl-1-phenyl-1,2,4- triazol-3-yl, 5-pyrrolidin-1-ylpyrimidin-2-yl, 6-(difluoromethoxy)pyridin-3-yl, 6-(trifluoromethyl)-1,3- benzoxazol-2-yl, 6,7-dihydro-4H-pyrazolo[5,1-c][1,4]oxazin-2-yl, 6,8-dihydro-5H-pyrano[3,4- d]pyrimidin-2-yl, 6-cyano-4-fluoropyridin-3-yl, 6-cyanopyridin-3-yl, 6-fluoro-1,3-benzoxazol-2-yl, 6- fluoropyrazolo[1,5-a]pyrimidin-5-yl, 6-methoxypyridin-3-yl, 7,8-dihydro-5H-pyrano[4,3-d]pyrimidin-2- yl, 7-methylpyrazolo[1,5-a]pyrimidin-5-yl, 8-chloro-[1,2,4]triazolo[1,5-a]pyridin-2-yl, 1- (ethoxycarbonyl)piperidin-4-yl, imidazo[1,2-a]pyrazin-8-yl, imidazo[1,2-a]pyridin-2-yl, imidazo[1,2- a]pyrimidin-7-yl, imidazo[1,2-c]pyrimidin-5-yl, pyrazin-2-yl, pyrazolo[1,5-a]pyridin-2-yl, pyridazin-4- yl, 1-(tert-butoxycarbonyl)-1-azaspiro[3.3]heptan-6-yl, or 6-oxo-1,6-dihydropyridazin-3-yl.
[0088] In certain embodiments, R5is (1-(2,2-difluoroethyl)cyclobutyl)methyl, (1-methyl-1H-imidazol-2- yl)methyl, (1-methyl-1H-pyrazol-4-yl)methyl, (1-methyl-1H-pyrazol-5-yl)methyl, (1R,2R,4S)-7- oxabicyclo[2.2.1]heptan-2-yl, (1S,2R,4R)-7-oxabicyclo[2.2.1]heptan-2-yl, (2-(trifluoromethyl)pyridin-3- yl)methyl, [1,2,4]triazolo[1,5-a]pyridin-2-yl, [1,2,4]triazolo[4,3-a]pyridin-6-yl, [1,2,4]triazolo[1,5- a]pyrazin-2-yl, 7-chloro-[1,2,4]triazolo[1,5-a]pyridin-2-yl, 7-(trifluoromethyl)-[1,2,4]triazolo[1,5- a]pyridin-2-yl, 6-chloro-[1,2,4]triazolo[1,5-a]pyridin-2-yl, 6-fluoro-[1,2,4]triazolo[1,5-a]pyridin-2-yl, 6- methoxy-[1,2,4]triazolo[1,5-a]pyridin-2-yl, 1-(2-hydroxy-2-methylpropyl)cyclopropyl, 1-(2- methoxyethyl)-1H-pyrazol-4-yl, 1-(2-methoxyethyl)-3-piperidyl, 1-(6-chloropyridazin-3-yl)piperidin-4- yl, 1-(hydroxymethyl)cyclopropyl, 1-(methoxycarbonyl)piperidin-3-yl, 1,1-dioxidothietan-3-yl, 1,3,5- triazin-2-yl, 1,3-dimethyl-1H-pyrazol-5-yl, 1,6-naphthyridin-2-yl, 1,7-naphthyridin-6-yl, 1,8- naphthyridin-2-yl, 1-bicyclo[2.2.2]octanyl, 1-cyclobutylpiperidin-3-yl, 1-cyclopropylpiperidin-3-yl, 1- ethyl-6-oxo-3-piperidyl, 1-ethylpiperidin-3-yl, 1H-benzo[d][1,2,3]triazol-5-yl, 1H-benzo[d]imidazol-2- yl, 1H-benzo[d]imidazol-6-yl, 1H-indazol-3-yl, 1H-indazol-5-yl, 1H-indazol-6-yl, 1H-indol-6-yl, 1H- pyrrolo[2,3-b]pyridin-5-yl, 1-methyl-1H-1,2,4-triazol-5-yl, 1-methyl-1H-benzo[d]imidazol-5-yl, 1-methyl-1H-indazol-5-yl, 1-methyl-1H-pyrazolo[4,3-b]pyridin-5-yl, 1-methyl-2-oxabicyclo[2.1.1]hexan- 4-yl, 1-methyl-2-oxo-4-piperidyl, 1-methyl-5-oxo-pyrrolidin-3-yl, 1-methyl-6-oxo-3-piperidyl, 1-methyl- 6-oxo-3-pyridyl, 1-phenyl-1H-pyrazol-5-yl, 1-phenylcyclopropyl, 2-(1H-imidazol-1-yl)ethyl, 2-(4- fluorophenyl)-2-hydroxyethyl, 2-(difluoromethoxy)phenyl, 2-(methylsulfonamido)ethyl, 2- (methylsulfonyl)ethyl, 2,2-difluorobenzo[d][1,3]dioxol-5-yl, 2,3-dihydro-1H-inden-2-yl, 2,3- dihydrobenzofuran-5-yl, 2,6-dimethylpyrimidin-4-yl, 2-chloro-4-(methylsulfonyl)phenyl, 2- cyanopropan-2-yl, 2-cyclopropyltetrahydropyran-4-yl, 2-hydroxy-2-methyl-propyl, 2-methyl-2H- pyrazolo[4,3-b]pyridin-5-yl, 2-methylbenzo[d]thiazol-6-yl, 2-morpholinoethyl, 2-oxabicyclo[2.2.2]octan- 4-yl, 2-oxaspiro[3.3]heptan-6-yl, 3-(1-hydroxy-1-methyl-ethyl)-1-bicyclo[1.1.1]pentanyl, 3-(2- methylthiazol-4-yl)phenyl, 3-(difluoromethoxy)cyclobutyl, 3-(difluoromethyl)cyclobutyl, 3- (hydroxymethyl)cyclobutyl, 3-(trifluoromethyl)-1-bicyclo[1.1.1]pentanyl, 3-(trifluoromethyl)cyclobutyl, 3,3,3-trifluoropropyl, 3,3-difluorocyclobutyl, 3,4-dimethylisoxazol-5-yl, 3,5-difluoro-2-pyridyl, 3-cyano- 1-bicyclo[1.1.1]pentanyl, 3-cyanocyclobutyl, 3-cyclopropyl-1H-pyrazol-5-yl, 3-cyclopropyl-1-methyl- 1H-pyrazol-5-yl, 3-fluoro-5-(1H-pyrazol-1-yl)pyridin-2-yl, 3-fluoro-5-(trifluoromethyl)pyridin-2-yl, 3- fluoro-5-formylpyridin-2-yl, 3-fluoropyridin-4-yl, 3-hydroxy-3-(trifluoromethyl)cyclobutyl, 3-hydroxy- 3-methylbutyl, 3-hydroxy-3-methylcyclobutyl, 3-hydroxycyclohexyl, 3-methyl-1-phenyl-1H-pyrazol-5- yl, 3-methylcyclobutyl, 4-(1H-tetrazol-5-yl)phenyl, 4-(2-methylthiazol-4-yl)pyrimidin-2-yl, 4,4- difluorocyclohexyl, 4,5,6,7-tetrahydro-1H-indazol-6-yl, 4,5,6,7-tetrahydropyrazolo[1,5-a]pyridin-5-yl, 4,5-dimethylpyrimidin-2-yl, 4,6-dimethylpyridin-2-yl, 4-cyanopyrimidin-2-yl, 4-hydroxy-1- bicyclo[2.2.2]octanyl, 4-methylpyridin-2-yl, 5-(difluoromethoxy)-2-pyridyl, 5-(difluoromethyl)pyridin-2- yl, 5-(pyridin-2-yl)pyrimidin-2-yl, 5-(trifluoromethyl)pyrimidin-2-yl, 5-(difluoromethoxy)pyrimidin-2- yl, 5,7-dihydrofuro[3,4-d]pyrimidin-2-yl, 5-chloro-3-fluoropyridin-2-yl, 5-chloropyridin-2-yl, 5- chloropyrimidin-2-yl, 5-cyano-3-fluoropyridin-2-yl, 5-cyanobenzo[d]oxazol-2-yl, 5-cyanopyridin-2-yl, 5-cyanopyrimidin-2-yl, 5-cyclopropylpyrimidin-2-yl, 5-cyclobutylpyrimidin-2-yl, 5-ethylpyrimidin-2-yl, 5-fluoro-4-methylpyrimidin-2-yl, 5-cyano-4-methylpyrimidin-2-yl, 5-fluoropyridin-2-yl, 5- fluoropyrimidin-2-yl, 5-fluoropyrimidin-4-yl, 5-iodopyrimidin-2-yl, 5-methoxypyrimidin-2-yl, 5- methyl-2-oxo-1,2-dihydropyridin-3-yl, 5-methylpyrimidin-2-yl, 5-pyrazol-1-ylpyrimidin-2-yl, 5- (tetrahydrofuran-3-yl)pyrimidin-2-yl, 5-(1-methyl-1H-pyrazol-4-yl)pyrimidin-2-yl, 6,7-dihydro-5H- pyrrolo[1,2-b][1,2,4]triazol-2-yl, 5-fluorothiazol-2-yl, 6-chloropyridazin-3-yl, 6-fluorobenzo[d]oxazol-2- yl, 6-cyanobenzo[d]oxazol-2-yl, 6-methylpyrazin-2-yl, 6-methylpyridin-2-yl, 6-oxo-1,6- dihydropyrimidin-2-yl, benzo[d]oxazol-2-yl, benzo[d]oxazol-5-yl, benzo[d]thiazol-5-yl, benzo[d]thiazol- 6-yl, cyclobutylmethyl, imidazo[1,2-a]pyrazin-6-yl, imidazo[1,2-a]pyridin-5-yl, imidazo[1,2-a]pyridin-8- yl, imidazo[1,2-b]pyridazin-6-yl, imidazo[1,5-a]pyridin-6-yl, isoquinolin-4-yl, isoquinolin-6-yl, isoquinolin-7-yl, isoquinolin-8-yl, isoxazolo[4,5-b]pyridin-5-yl, isoxazolo[5,4-b]pyridin-6-yl, oxazol-2- ylmethyl, oxazolo[4,5-b]pyridin-2-yl, oxazolo[4,5-c]pyridin-2-yl, oxazolo[5,4-b]pyridin-2-yl, oxazolo[5,4-c]pyridin-2-yl, oxetan-3-ylmethyl, phenyl, pyrazolo[1,5-a]pyrimidin-5-yl, pyridin-4-ylmethyl, pyrimidin-2-yl, quinazolin-2-yl, quinolin-2-yl, quinolin-3-yl, quinolin-5-yl, quinolin-6-yl, or spiro[2.3]hexan-5-yl.
[0089] In certain embodiments, R5is (1-(2,2-difluoroethyl)cyclobutyl)methyl, (1-methyl-1H-imidazol-2- yl)methyl, (1-methyl-1H-pyrazol-4-yl)methyl, (1-methyl-1H-pyrazol-5-yl)methyl, (1R,2R,4S)-7- oxabicyclo[2.2.1]heptan-2-yl, (1S,2R,4R)-7-oxabicyclo[2.2.1]heptan-2-yl, (2-(trifluoromethyl)pyridin-3- yl)methyl, [1,2,4]triazolo[1,5-a]pyridin-2-yl, [1,2,4]triazolo[4,3-a]pyridin-6-yl, 1-(2-hydroxy-2- methylpropyl)cyclopropyl, 1-(2-methoxyethyl)-1H-pyrazol-4-yl, 1-(2-methoxyethyl)-3-piperidyl, 1-(6- chloropyridazin-3-yl)piperidin-4-yl, 1-(hydroxymethyl)cyclopropyl, 1-(methoxycarbonyl)piperidin-3-yl, 1,1-dioxidothietan-3-yl, 1,3,5-triazin-2-yl, 1,3-dimethyl-1H-pyrazol-5-yl, 1,6-naphthyridin-2-yl, 1,7- naphthyridin-6-yl, 1,8-naphthyridin-2-yl, 1-bicyclo[2.2.2]octanyl, 1-cyclobutylpiperidin-3-yl, 1-ethyl-6- oxo-3-piperidyl, 1-ethylpiperidin-3-yl, 1H-benzo[d][1,2,3]triazol-5-yl, 1H-benzo[d]imidazol-2-yl, 1H- benzo[d]imidazol-6-yl, 1H-indazol-3-yl, 1H-indazol-5-yl, 1H-indazol-6-yl, 1H-indol-6-yl, 1H- pyrrolo[2,3-b]pyridin-5-yl, 1-methyl-1H-1,2,4-triazol-5-yl, 1-methyl-1H-benzo[d]imidazol-5-yl, 1- methyl-1H-indazol-5-yl, 1-methyl-1H-pyrazolo[4,3-b]pyridin-5-yl, 1-methyl-2-oxabicyclo[2.1.1]hexan- 4-yl, 1-methyl-2-oxo-4-piperidyl, 1-methyl-5-oxo-pyrrolidin-3-yl, 1-methyl-6-oxo-3-piperidyl, 1-methyl- 6-oxo-3-pyridyl, 1-phenyl-1H-pyrazol-5-yl, 1-phenylcyclopropyl, 2-(1H-imidazol-1-yl)ethyl, 2-(4- fluorophenyl)-2-hydroxyethyl, 2-(difluoromethoxy)phenyl, 2-(methylsulfonamido)ethyl, 2- (methylsulfonyl)ethyl, 2,2-difluorobenzo[d][1,3]dioxol-5-yl, 2,3-dihydro-1H-inden-2-yl, 2,3- dihydrobenzofuran-5-yl, 2,6-dimethylpyrimidin-4-yl, 2-chloro-4-(methylsulfonyl)phenyl, 2- cyanopropan-2-yl, 2-cyclopropyltetrahydropyran-4-yl, 2-hydroxy-2-methyl-propyl, 2-methyl-2H- pyrazolo[4,3-b]pyridin-5-yl, 2-methylbenzo[d]thiazol-6-yl, 2-morpholinoethyl, 2-oxabicyclo[2.2.2]octan- 4-yl, 2-oxaspiro[3.3]heptan-6-yl, 3-(1-hydroxy-1-methyl-ethyl)-1-bicyclo[1.1.1]pentanyl, 3-(2- methylthiazol-4-yl)phenyl, 3-(difluoromethoxy)cyclobutyl, 3-(difluoromethyl)cyclobutyl, 3- (hydroxymethyl)cyclobutyl, 3-(trifluoromethyl)-1-bicyclo[1.1.1]pentanyl, 3-(trifluoromethyl)cyclobutyl, 3,3,3-trifluoropropyl, 3,3-difluorocyclobutyl, 3,4-dimethylisoxazol-5-yl, 3,5-difluoro-2-pyridyl, 3-cyano- 1-bicyclo[1.1.1]pentanyl, 3-cyanocyclobutyl, 3-cyclopropyl-1H-pyrazol-5-yl, 3-cyclopropyl-1-methyl- 1H-pyrazol-5-yl, 3-fluoro-5-(1H-pyrazol-1-yl)pyridin-2-yl, 3-fluoro-5-(trifluoromethyl)pyridin-2-yl, 3- fluoro-5-formylpyridin-2-yl, 3-fluoropyridin-4-yl, 3-hydroxy-3-(trifluoromethyl)cyclobutyl, 3-hydroxy- 3-methylbutyl, 3-hydroxy-3-methylcyclobutyl, 3-hydroxycyclohexyl, 3-methyl-1-phenyl-1H-pyrazol-5- yl, 3-methylcyclobutyl, 4-(1H-tetrazol-5-yl)phenyl, 4-(2-methylthiazol-4-yl)pyrimidin-2-yl, 4,4- difluorocyclohexyl, 4,5,6,7-tetrahydro-1H-indazol-6-yl, 4,5,6,7-tetrahydropyrazolo[1,5-a]pyridin-5-yl, 4,5-dimethylpyrimidin-2-yl, 4,6-dimethylpyridin-2-yl, 4-cyanopyrimidin-2-yl, 4-hydroxy-1- bicyclo[2.2.2]octanyl, 4-methylpyridin-2-yl, 5-(difluoromethoxy)-2-pyridyl, 5-(difluoromethyl)pyridin-2- yl, 5-(pyridin-2-yl)pyrimidin-2-yl, 5-(trifluoromethyl)pyrimidin-2-yl, 5,7-dihydrofuro[3,4-d]pyrimidin-2- yl, 5-chloro-3-fluoropyridin-2-yl, 5-chloropyridin-2-yl, 5-chloropyrimidin-2-yl, 5-cyano-3-fluoropyridin- 2-yl, 5-cyanobenzo[d]oxazol-2-yl, 5-cyanopyridin-2-yl, 5-cyanopyrimidin-2-yl, 5-cyclopropylpyrimidin- 2-yl, 5-ethylpyrimidin-2-yl, 5-fluoro-4-methylpyrimidin-2-yl, 5-fluoropyridin-2-yl, 5-fluoropyrimidin-2-yl, 5-fluoropyrimidin-4-yl, 5-methoxypyrimidin-2-yl, 5-methyl-2-oxo-1,2-dihydropyridin-3-yl, 5- methylpyrimidin-2-yl, 5-pyrazol-1-ylpyrimidin-2-yl, 6,7-dihydro-5H-pyrrolo[1,2-b][1,2,4]triazol-2-yl, 5- fluorothiazol-2-yl, 6-chloropyridazin-3-yl, 6-cyanobenzo[d]oxazol-2-yl, 6-methylpyrazin-2-yl, 6- methylpyridin-2-yl, 6-oxo-1,6-dihydropyrimidin-2-yl, benzo[d]oxazol-2-yl, benzo[d]oxazol-5-yl, benzo[d]thiazol-5-yl, benzo[d]thiazol-6-yl, cyclobutylmethyl, imidazo[1,2-a]pyrazin-6-yl, imidazo[1,2- a]pyridin-5-yl, imidazo[1,2-a]pyridin-8-yl, imidazo[1,2-b]pyridazin-6-yl, imidazo[1,5-a]pyridin-6-yl, isoquinolin-4-yl, isoquinolin-6-yl, isoquinolin-7-yl, isoquinolin-8-yl, isoxazolo[4,5-b]pyridin-5-yl, isoxazolo[5,4-b]pyridin-6-yl, oxazol-2-ylmethyl, oxazolo[4,5-b]pyridin-2-yl, oxazolo[4,5-c]pyridin-2-yl, oxazolo[5,4-b]pyridin-2-yl, oxazolo[5,4-c]pyridin-2-yl, oxetan-3-ylmethyl, phenyl, pyrazolo[1,5- a]pyrimidin-5-yl, pyridin-4-ylmethyl, pyrimidin-2-yl, quinazolin-2-yl, quinolin-2-yl, quinolin-3-yl, quinolin-5-yl, quinolin-6-yl, or spiro[2.3]hexan-5-yl.
[0090] In certain embodiments, R4and R5together form a heterocyclyl or heteroaryl ring optionally substituted with one to eight Z1. In certain embodiments, R4and R5together form a heterocyclyl ring optionally substituted with one to eight Z1. In certain embodiments, R4and R5together form a 3-(1- hydroxy-1-methyl-ethyl)pyrrolidin-1-yl, 3-hydroxy-3-methyl-pyrrolidin-1-yl, 5,7-dihydro-6H- pyrrolo[3,4-b]pyridin-6-yl, or 2,3-dihydro-1H-pyrrolo[2,3-b]pyridin-1-yl. In certain embodiments, R4and R5together form a 3-(1-hydroxy-1-methyl-ethyl)pyrrolidin-1-yl, or 3-hydroxy-3-methyl-pyrrolidin-1-yl.
[0091] In certain embodiments, R5is not C1-6alkyl, or when R4and R5together form a heterocyclyl or heteroaryl ring, the ring is not pyrrolidine, piperidine, morpholine, piperazine, N-lower alkylpiperazine or N-6-hydroxyethylpiperazine. In certain embodiments, R5is not C1-6alkyl. certain embodiments, R4and R5together form a heterocyclyl or heteroaryl ring optionally substituted with one to eight Z1, provided the heterocyclyl or heteroaryl ring is not unsubstituted pyrrolidine, unsubstituted piperidine, unsubstituted morpholine, unsubstituted piperazine, N-lower alkylpiperazine, or N-6-hydroxyethylpiperazine.
[0092] In certain embodiments, R9is hydrogen or C1-6alkyl. In certain embodiments, R9is hydrogen or methyl and R10is hydrogen. In certain embodiments, R9is hydrogen. In certain embodiments, R10is hydrogen. In certain embodiments, R9and R10are hydrogen. In certain embodiments, R9is methyl and R10is hydrogen.
[0093] In certain embodiments, provided is a compound represented by Formula II:wherein: R1, R2, R3, R4, R6, and R7are each independently as defined herein; p is 1, 2, 3, or 4; andring A is C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl; wherein the C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl is optionally substituted with one to eight Z1.
[0094] In certain embodiments, provided is a compound represented by Formula III:wherein: R1, R2, R3, R4, R6, and R7are each independently as defined herein; p is 1, 2, or 3; and ring A is C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl; wherein the C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl is optionally substituted with one to eight Z1.
[0095] In certain embodiments, provided is a compound represented by Formula IV:wherein: R1, R2, R3, R4, R6, and R7are each independently as defined herein; p is 1, 2, or 3; and ring A is C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl; wherein the C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl is optionally substituted with one to eight Z1.
[0096] In certain embodiments, provided is a compound represented by Formula V:wherein: R1, R2, R3, R4, R6, and R7are each independently as defined herein; p is 1, 2, or 3; and ring A is C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl; wherein the C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl is optionally substituted with one to eight Z1.
[0097] In certain embodiments, provided is a compound represented by Formula VI:wherein: R1, R2, R3, R4, R6, and R7are each independently as defined herein; p is 1, 2, or 3; and ring A is C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl; wherein the C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl is optionally substituted with one to eight Z1.
[0098] In certain embodiments, R4is hydrogen or methyl. In certain embodiments, R4is hydrogen.
[0099] In certain embodiments, R6is hydrogen, halo, cyano, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C2-6heteroalkyl, C3-10cycloalkyl, or heterocyclyl. In certain embodiments, R6is hydrogen.
[0100] In certain embodiments, R7is hydrogen, halo, cyano, hydroxy, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C2-6heteroalkyl, C3-10cycloalkyl, or heterocyclyl. In certain embodiments, R7is hydrogen.
[0101] In certain embodiments, R6and R7are hydrogen.
[0102] In certain embodiments, R6and R7join to form a C3-10cycloalkyl.
[0103] In certain embodiments, R4is hydrogen; R6is hydrogen; and R7is hydrogen.
[0104] In certain embodiments, provided is a compound represented by Formula VII:. wherein: R1, R2, and R3are each independently as defined herein; p is 1, 2, 3, or 4; and ring A is C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl; wherein the C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl is optionally substituted with one to eight Z1.
[0105] In certain embodiments, p is 1. In certain embodiments, p is 2. In certain embodiments, p is 1 or 2. In certain embodiments, p is 3. In certain embodiments, p is 4.
[0106] In certain embodiments, each R1is independently halo, cyano, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6alkoxy, C1-6haloalkyl, C1-6haloalkoxy, C3-10cycloalkyl, or heterocyclyl, wherein the C1-6alkyl, C2-6alkenyl, and C3-10cycloalkyl are independently optionally substituted with one to eight Z1; or any two adjacent R1together with the atoms to which they are attached form a cycloalkyl, heterocyclyl, aryl, or heteroaryl ring.
[0107] In certain embodiments, each R1is independently fluoro, bromo, chloro, iodo, cyano, ethyl, vinyl, difluoromethyl, trifluoromethyl, 1-fluoroethyl, 1,1-difluoroethyl, methoxy, fluoromethoxy,difluoromethoxy, cyclopropyl, cyclobutyl, cyclopropylmethyl, oxetan-3-yl, 2,2-difluorocycloprop-1-yl, 1-cyanocyclopropyl, 1-methylcyclopropyl, 1-fluoro-2-(trifluoromethyl)cyclopropyl, ethynyl, 1- fluorovinyl, 1-fluorocyclopropyl, 2-fluorocyclopropyl, or 1,2-difluorocyclopropyl; or two adjacent R1together with the atoms to which they are attached form a thiophene.
[0108] In certain embodiments, each R1is independently halo, cyano, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6alkoxy, C1-6haloalkyl, C1-6haloalkoxy, or C3-10cycloalkyl, wherein the C2-6alkenyl or C3-10cycloalkyl is independently optionally substituted with one to eight Z1. In certain embodiments, each R1is independently halo, cyano, C1-6alkyl, C1-6alkoxy, C1-6haloalkyl, C1-6haloalkoxy, or C3-10cycloalkyl, wherein the C3-10cycloalkyl is independently optionally substituted with one to eight Z1. In certain embodiments, each R1is independently halo, cyano, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6alkoxy, C1-6haloalkyl, C1-6haloalkoxy, or C3-10cycloalkyl, wherein the C2-6alkenyl or C3-10cycloalkyl is independently optionally substituted with one to eight Z1, wherein each is independently selected from halo, cyano and C1-6alkyl.
[0109] In certain embodiments, each R1is independently halo, cyano, C1-6alkyl, C1-6alkoxy, C1-6haloalkoxy, C1-6haloalkyl, or C3-10cycloalkyl. In certain embodiments, each R1is independently halo, cyano, C1-6haloalkoxy, C1-6haloalkyl, or C3-10cycloalkyl. In certain embodiments, each R1is independently halo, cyano, C1-6alkyl, C1-6alkoxy, or C1-6haloalkyl. In certain embodiments, each R1is independently halo or C1-6alkyl.
[0110] In certain embodiments, each R1is independently fluoro, bromo, chloro, iodo, cyano, difluoromethyl, trifluoromethyl, 1,1-difluoroethyl, methoxy, fluoromethoxy, difluoromethoxy, cyclopropyl, cyclobutyl, 2,2-difluorocycloprop-1-yl, 1-cyanocyclopropyl, and 1-methylcyclopropyl, ethynyl, 1-fluorovinyl, 1-fluorocyclopropyl, or 1,2-difluorocyclopropyl. In certain embodiments, each R1is independently fluoro, bromo, chloro, iodo, cyano, difluoromethyl, trifluoromethyl, 1,1- difluoroethyl, methoxy, fluoromethoxy, difluoromethoxy, cyclopropyl, cyclobutyl, 2,2- difluorocycloprop-1-yl, 1-cyanocyclopropyl, and 1-methylcyclopropyl. In certain embodiments, each R1is independently fluoro, bromo, -CH3, -OCHF2, -CF3, or cyclopropyl. In certain embodiments, each R1is independently fluoro, bromo, or -CH3. In certain embodiments, each R1is independently halo. In certain embodiments, each R1is independently bromo. In certain embodiments, each R1is independently halo or -CF3.
[0111] In certain embodiments, p is 1; and each R1is independently halo, cyano, C1-6alkyl, C1-6alkoxy, or C1-6haloalkyl. In certain embodiments, p is 2; and each R1is independently halo, cyano, C1-6alkyl, C1-6alkoxy, or C1-6haloalkyl. In certain embodiments, p is 1 or 2; and each R1is independently halo, cyano, C1-6alkyl, C1-6alkoxy, or C1-6haloalkyl.
[0112] In certain embodiments, R2and R3together form a C3-10cycloalkyl or heterocyclyl ring; wherein the C3-10cycloalkyl or heterocyclyl is independently optionally substituted with one to eight Z1. In certain embodiments, R2and R3together form a C3-10cycloalkyl ring optionally substituted with one to eight Z1. In certain embodiments, R2and R3together form a C3-10cycloalkyl optionally substituted withhalo, cyano, C1-6alkyl or C1-6haloalkyl. In certain embodiments, R2and R3together form a C3-10cycloalkyl optionally substituted with halo, C1-6alkyl or C1-6haloalkyl. In certain embodiments, R2and R3together form a C3-10cycloalkyl optionally substituted with fluoro, methyl or trifluoromethyl. In certain embodiments, R2and R3together form a C3-10cycloalkyl ring optionally substituted with C1-6alkyl. In certain embodiments, R2and R3together form a C3-10cycloalkyl ring optionally substituted with methyl. In certain embodiments, R2and R3together form a heterocyclyl ring optionally substituted with one to eight Z1. In certain embodiments, R2and R3together form a C3-10cycloalkyl or heterocyclyl ring. In certain embodiments, R2and R3together form an unsubstituted C3-10cycloalkyl ring. In certain embodiments, R2and R3together form an unsubstituted cyclopropyl ring. In certain embodiments, R2and R3together form an unsubstituted heterocyclyl ring.
[0113] In certain embodiments, R2is C1-6alkyl, C1-6haloalkyl, or -OR11, wherein R11is C1-6alkyl optionally substituted with one to five Z1a. In certain embodiments, R2is C1-6alkyl or C1-6haloalkyl, and R3is hydrogen or C1-6alkyl. In certain embodiments, R2is C1-6alkyl or C1-6haloalkyl. In certain embodiments, R2is C1-6alkyl. In certain embodiments, R2is methyl or ethyl.
[0114] In certain embodiments, R2is -C(R14)2R15; each R14and R15are independently hydrogen, halo, C1-4 alkyl, or C1-4 haloalkyl. In certain embodiments, R2is -C(R14)2R15; each R14is independently hydrogen, halo, C1-4 alkyl, or C1-4 haloalkyl, and R15is hydrogen.
[0115] In certain embodiments, R3is hydrogen, C1-6alkyl or C1-6haloalkyl. In certain embodiments, R3is hydrogen or C1-6alkyl. In certain embodiments, R3is C1-6alkyl. In certain embodiments, R3is hydrogen or methyl. In certain embodiments, R3is hydrogen. In certain embodiments, R3is methyl.
[0116] In certain embodiments, R2is C1-6alkyl; R3is hydrogen, or C1-6alkyl; or R2and R3together form a C3-10cycloalkyl ring optionally substituted with C1-6alkyl. In certain embodiments, R2and R3are C1-6alkyl.
[0117] In certain embodiments, provided is a compound represented by Formula VIII:wherein q is 0, 1, 2, 3, or 4, and R1and ring A are each independently as defined herein.
[0118] In certain embodiments, provided is a compound represented by Formula IX:wherein q is 0, 1, 2, 3, or 4, and R1and ring A are each independently as defined herein.
[0119] In certain embodiments, q is 1. In certain embodiments, q is 2. In certain embodiments, q is 3. In certain embodiments, q is 4. In certain embodiments, each Z1is independently halo, cyano, C1-6alkyl, or C1-6haloalkyl. In certain embodiments, q is 1 or 2; and each Z1is independently halo, cyano, C1-6alkyl, or C1-6haloalkyl.
[0120] In certain embodiments, provided is a compound represented by Formula VIIIA:wherein R1and ring A are each independently as defined herein.
[0121] In certain embodiments, R1is halo, cyano, C1-6alkyl, C1-6alkoxy, or C1-6haloalkyl. In certain embodiments, R1is halo. In certain embodiments, R1is bromo. In certain embodiments, R1is -CF3.
[0122] In certain embodiments, provided is a compound represented by Formula IXA:wherein R1and ring A are each independently as defined herein.
[0123] In certain embodiments, each R1is independently halo, cyano, C1-6alkyl, C1-6alkoxy, or C1-6haloalkyl. In certain embodiments, each R1is independently fluoro, bromo, -CH3, or -CF3. In certain embodiments, each R1is independently halo. In certain embodiments, each R1is independently bromo. In certain embodiments, each R1is independently halo or -CF3.
[0124] In certain embodiments, R5or ring A is C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl; wherein the C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl is independently optionally substituted with one to five Z1. In certain embodiments, R5or ring A is C3-10cycloalkyl, heterocyclyl or heteroaryl; wherein the C3-10cycloalkyl, heterocyclyl or heteroaryl is independently optionally substituted with one to five Z1.
[0125] In certain embodiments, R5or ring A is pyrazolo[3,4-d]pyrimidinyl, imidazo[1,2-b]pyridazinyl, pyrazolo[1,5-a]pyridinyl, 5H-1,3-oxazolyl, 4,5,6,7-tetrahydro-1,3-benzoxazolyl, 1,3-benzoxazolyl, 3- oxopyrazinyl, 4-azaspiro[2.5]octanyl, 5-oxopyrazinyl, 4H-1,3-oxazolyl, 5,6,7,8-tetrahydro- [1,2,4]triazolo[1,5-a]pyridinyl, 5,6-dihydrofuro[2,3-d]pyrimidinyl, 6,7-dihydro-4H-pyrazolo[5,1- c][1,4]oxazinyl, 6,8-dihydro-5H-pyrano[3,4-d]pyrimidinyl, 7,8-dihydro-5H-pyrano[4,3-d]pyrimidinyl, imidazo[1,2-c]pyrimidinyl, oxopyridazinyl, 2-oxopyrrolidinyl, azaspiro[3.3]heptanyl, azabicyclo[2.2.2]octanyl, [1,2,4]triazolo[4,3-a]pyrazinyl, [1,3]thiazolo[5,4-d]pyrimidinyl, pyrrolidinyl, 1,2,4-benzotriazinyl, 1,2-benzothiazolyl, 1,2-benzoxazolyl, pyrazinyl, [1,2,4]triazolo[1,5-a]pyrazinyl, [1,2,4]triazolo[1,5-a]pyridinyl, [1,2,4]triazolo[4,3-a]pyridinyl, 1,2,4-triazolyl, 1,3,5-triazinyl, 1,6- naphthyridinyl, 1,7-naphthyridinyl, 1,8-naphthyridinyl, 1H-benzo[d][1,2,3]triazolyl, 1H- benzo[d]imidazolyl, 1H-indazolyl, 1H-pyrrolo[2,3-b]pyridinyl, 2,3-dihydro-1H-indenyl, 2,3-dihydro-1H-pyrrolo[2,3-b]pyridinyl, 2,3-dihydrobenzofuranyl, 2-oxo-1,2-dihydropyridinyl, 2-oxopiperidyl, 2-oxo- pyrrolidinyl, 4,5,6,7-tetrahydroindazolyl, 4,5,6,7-tetrahydropyrazolo[1,5-a]pyridinyl, 5,7-dihydro-6H- pyrrolo[3,4-b]pyridinyl, 5,7-dihydrofuro[3,4-d]pyrimidinyl, 6,7-dihydro-5H-pyrrolo[1,2- b][1,2,4]triazolyl, thiazolyl, 6-oxo-1,6-dihydropyrimidinyl, benzo[d][1,3]dioxolyl, benzo[d]oxazolyl, benzo[d]thiazolyl, bicyclo[1.1.1]pentanyl, bicyclo[2.2.2]octanyl, cyclobutyl, cyclohexyl, cyclopropyl, imidazo[1,2-a]pyrazinyl, imidazo[1,2-a]pyridinyl, imidazo[1,2-b]pyridazinyl, imidazo[1,5-a]pyridinyl, indazolyl, indolyl, isoquinolinyl, isoxazolo[4,5-b]pyridinyl, isoxazolo[5,4-b]pyridinyl, isoxazolyl, imidazo[1,2-a]pyridinyl, oxabicyclo[2.1.1]hexanyl, oxabicyclo[2.2.1]heptanyl, oxabicyclo[2.2.2]octanyl, oxaspiro[3.3]heptanyl, oxazolo[4,5-b]pyridinyl, oxazolo[4,5-c]pyridinyl, oxazolo[5,4-b]pyridinyl, oxazolo[5,4-c]pyridinyl, phenyl, piperidinyl, pyrazolo[1,5-a]pyrimidinyl, pyrazolo[4,3-b]pyridinyl, pyrazolyl, pyridazinyl, pyridinyl, pyrimidinyl, quinazolinyl, quinolinyl, spiro[2.3]hexanyl, or tetrahydropyranyl; wherein each is independently optionally substituted with one to five Z1.
[0126] In certain embodiments, R5or ring A is [1,2,4]triazolo[1,5-a]pyrazinyl, [1,2,4]triazolo[1,5- a]pyridinyl, [1,2,4]triazolo[4,3-a]pyridinyl, 1,2,4-triazolyl, 1,3,5-triazinyl, 1,6-naphthyridinyl, 1,7- naphthyridinyl, 1,8-naphthyridinyl, 1H-benzo[d][1,2,3]triazolyl, 1H-benzo[d]imidazolyl, 1H-indazolyl, 1H-pyrrolo[2,3-b]pyridinyl, 2,3-dihydro-1H-indenyl, 2,3-dihydro-1H-pyrrolo[2,3-b]pyridinyl, 2,3- dihydrobenzofuranyl, 2-oxo-1,2-dihydropyridinyl, 2-oxopiperidyl, 2-oxo-pyrrolidinyl, 4,5,6,7- tetrahydroindazolyl, 4,5,6,7-tetrahydropyrazolo[1,5-a]pyridinyl, 5,7-dihydro-6H-pyrrolo[3,4-b]pyridinyl, 5,7-dihydrofuro[3,4-d]pyrimidinyl, 6,7-dihydro-5H-pyrrolo[1,2-b][1,2,4]triazolyl, thiazolyl, 6-oxo-1,6- dihydropyrimidinyl, benzo[d][1,3]dioxolyl, benzo[d]oxazolyl, benzo[d]thiazolyl, bicyclo[1.1.1]pentanyl, bicyclo[2.2.2]octanyl, cyclobutyl, cyclohexyl, cyclopropyl, imidazo[1,2-a]pyrazinyl, imidazo[1,2- a]pyridinyl, imidazo[1,2-b]pyridazinyl, imidazo[1,5-a]pyridinyl, indazolyl, indolyl, isoquinolinyl, isoxazolo[4,5-b]pyridinyl, isoxazolo[5,4-b]pyridinyl, isoxazolyl, imidazo[1,2-a]pyridinyl, oxabicyclo[2.1.1]hexanyl, oxabicyclo[2.2.1]heptanyl, oxabicyclo[2.2.2]octanyl, oxaspiro[3.3]heptanyl, oxazolo[4,5-b]pyridinyl, oxazolo[4,5-c]pyridinyl, oxazolo[5,4-b]pyridinyl, oxazolo[5,4-c]pyridinyl, phenyl, piperidinyl, pyrazolo[1,5-a]pyrimidinyl, pyrazolo[4,3-b]pyridinyl, pyrazolyl, pyridazinyl, pyridinyl, pyrimidinyl, quinazolinyl, quinolinyl, spiro[2.3]hexanyl, or tetrahydropyranyl; wherein each is independently optionally substituted with one to five Z1.
[0127] In certain embodiments, R5or ring A is [1,2,4]triazolo[1,5-a]pyridinyl, [1,2,4]triazolo[4,3- a]pyridinyl, 1,2,4-triazolyl, 1,3,5-triazinyl, 1,6-naphthyridinyl, 1,7-naphthyridinyl, 1,8-naphthyridinyl, 1H-benzo[d][1,2,3]triazolyl, 1H-benzo[d]imidazolyl, 1H-indazolyl, 1H-pyrrolo[2,3-b]pyridinyl, 2,3- dihydro-1H-indenyl, 2,3-dihydro-1H-pyrrolo[2,3-b]pyridinyl, 2,3-dihydrobenzofuranyl, 2-oxo-1,2- dihydropyridinyl, 2-oxopiperidyl, 2-oxo-pyrrolidinyl, 4,5,6,7-tetrahydroindazolyl, 4,5,6,7- tetrahydropyrazolo[1,5-a]pyridinyl, 5,7-dihydro-6H-pyrrolo[3,4-b]pyridinyl, 5,7-dihydrofuro[3,4- d]pyrimidinyl, 6,7-dihydro-5H-pyrrolo[1,2-b][1,2,4]triazolyl, thiazolyl, 6-oxo-1,6-dihydropyrimidinyl, benzo[d][1,3]dioxolyl, benzo[d]oxazolyl, benzo[d]thiazolyl, bicyclo[1.1.1]pentanyl, bicyclo[2.2.2]octanyl, cyclobutyl, cyclohexyl, cyclopropyl, imidazo[1,2-a]pyrazinyl, imidazo[1,2-a]pyridinyl, imidazo[1,2-b]pyridazinyl, imidazo[1,5-a]pyridinyl, indazolyl, indolyl, isoquinolinyl, isoxazolo[4,5-b]pyridinyl, isoxazolo[5,4-b]pyridinyl, isoxazolyl, imidazo[1,2-a]pyridinyl, oxabicyclo[2.1.1]hexanyl, oxabicyclo[2.2.1]heptanyl, oxabicyclo[2.2.2]octanyl, oxaspiro[3.3]heptanyl, oxazolo[4,5-b]pyridinyl, oxazolo[4,5-c]pyridinyl, oxazolo[5,4-b]pyridinyl, oxazolo[5,4-c]pyridinyl, phenyl, piperidinyl, pyrazolo[1,5-a]pyrimidinyl, pyrazolo[4,3-b]pyridinyl, pyrazolyl, pyridazinyl, pyridinyl, pyrimidinyl, quinazolinyl, quinolinyl, spiro[2.3]hexanyl, or tetrahydropyranyl; wherein each is independently optionally substituted with one to five Z1.
[0128] In certain embodiments, R5or ring A is pyrimidinyl, pyridinyl, pyridazinyl, bicyclo[1.1.1]pentanyl, piperidinyl, oxabicyclo[2.2.1]heptanyl, cyclohexyl, cyclobutyl, 4,5,6,7- tetrahydropyrazolo[1,5-a]pyridinyl, tetrahydropyranyl, 2-oxopiperidyl, spiro[2.3]hexanyl, indazolyl, indolyl, 4,5,6,7-tetrahydroindazolyl, 5-oxo-pyrrolidin-3-yl, oxabicyclo[2.2.2]octanyl, oxaspiro[3.3]heptanyl, oxabicyclo[2.1.1]hexanyl, or bicyclo[2.2.2]octanyl; wherein each is independently optionally substituted with one to five Z1.
[0129] In certain embodiments, R5or ring A is pyrimidinyl, pyridinyl, pyridazinyl, bicyclo[1.1.1]pentanyl, piperidinyl, oxabicyclo[2.2.1]heptanyl, cyclohexyl, cyclobutyl, 4,5,6,7- tetrahydropyrazolo[1,5-a]pyridinyl, tetrahydropyranyl, 2-oxopiperidyl, or spiro[2.3]hexanyl; wherein each is independently optionally substituted with one to five Z1.
[0130] In certain embodiments, R5is 5-fluoropyrimidin-4-yl, 5-fluoropyrimidin-2-yl, 5-cyanopyrimidin- 2-yl, 5-chloropyrimidin-2-yl, pyrimidin-2-yl, 5-fluoropyrimidin-4-yl, 5-cyano-3-fluoropyridin-2-yl, 5- chloro-3-fluoropyridin-2-yl, 3-fluoro-5-(trifluoromethyl)pyridin-2-yl, 6-chloropyridazin-3-yl, 3- fluoropyridin-4-yl, 3,5-difluoro-2-pyridyl, 3-(trifluoromethyl)-1-bicyclo[1.1.1]pentanyl, 1- cyclobutylpiperidin-3-yl, 3-cyano-1-bicyclo[1.1.1]pentanyl, 4,4-difluorocyclohexyl, (1R,2R,4S)-7- oxabicyclo[2.2.1]heptan-2-yl, (1S,2R,4R)-7-oxabicyclo[2.2.1]heptan-2-yl, 1-ethylpiperidin-3-yl, 3- hydroxy-3-methylcyclobutyl, 4,5,6,7-tetrahydropyrazolo[1,5-a]pyridin-5-yl, 1-methyl-6-oxo-3-piperidyl, 1-methyl-2-oxo-4-piperidyl, spiro[2.3]hexan-5-yl, 2-cyclopropyltetrahydropyran-4-yl, 1-(2- methoxyethyl)-3-piperidyl, 1-cyclobutylpiperidin-3-yl, 5-(difluoromethoxy)-2-pyridyl, 3-fluoro-5- formylpyridin-2-yl, 1-ethyl-6-oxo-3-piperidyl, 5-pyrazol-1-ylpyrimidin-2-yl, 5-cyanopyridin-2-yl, 1- methyl-6-oxo-3-pyridyl, 1H-indazol-6-yl, 1H-indol-6-yl, 4,5,6,7-tetrahydro-1H-indazol-6-yl, 1- (methoxycarbonyl)piperidin-3-yl, 1-methyl-5-oxo-pyrrolidin-3-yl, 2-oxabicyclo[2.2.2]octan-4-yl, 2- oxaspiro[3.3]heptan-6-yl, 1-methyl-2-oxabicyclo[2.1.1]hexan-4-yl, 3-(1-hydroxy-1-methyl-ethyl)-1- bicyclo[1.1.1]pentanyl, 3-methylcyclobutyl, 3-(trifluoromethyl)cyclobutyl, 3-hydroxy-3- (trifluoromethyl)cyclobutyl, 1-bicyclo[2.2.2]octanyl, 4-hydroxy-1-bicyclo[2.2.2]octanyl, 3- hydroxycyclohexyl, 3-(difluoromethoxy)cyclobutyl, 3-(hydroxymethyl)cyclobutyl, 3-cyanocyclobutyl, 3,3-difluorocyclobutyl, 3-hydroxy-3-methylbutyl, or 2-hydroxy-2-methyl-propyl.
[0131] In certain embodiments, R5or ring A is 5-fluoropyrimidin-4-yl, 5-fluoropyrimidin-2-yl, 5- cyanopyrimidin-2-yl, 5-chloropyrimidin-2-yl, pyrimidin-2-yl, 5-fluoropyrimidin-4-yl, 5-cyano-3- fluoropyridin-2-yl, 5-chloro-3-fluoropyridin-2-yl, 3-fluoro-5-(trifluoromethyl)pyridin-2-yl, 6-chloropyridazin-3-yl, 3-fluoropyridin-4-yl, 3,5-difluoro-2-pyridyl, 3-(trifluoromethyl)-1- bicyclo[1.1.1]pentanyl, 1-cyclobutylpiperidin-3-yl, 3-cyano-1-bicyclo[1.1.1]pentanyl, 4,4- difluorocyclohexyl, (1R,2R,4S)-7-oxabicyclo[2.2.1]heptan-2-yl, (1S,2R,4R)-7-oxabicyclo[2.2.1]heptan- 2-yl, 1-ethylpiperidin-3-yl, 3-hydroxy-3-methylcyclobutyl, 4,5,6,7-tetrahydropyrazolo[1,5-a]pyridin-5-yl, 1-methyl-6-oxo-3-piperidyl, 1-methyl-2-oxo-4-piperidyl, spiro[2.3]hexan-5-yl, 2- cyclopropyltetrahydropyran-4-yl, 1-(2-methoxyethyl)-3-piperidyl, 1-cyclobutylpiperidin-3-yl, 5- (difluoromethoxy)-2-pyridyl, 3-fluoro-5-formylpyridin-2-yl, 1-ethyl-6-oxo-3-piperidyl, 5-pyrazol-1- ylpyrimidin-2-yl, 5-cyanopyridin-2-yl, 1-methyl-6-oxo-3-pyridyl, 1H-indazol-6-yl, 1H-indol-6-yl, 4,5,6,7-tetrahydro-1H-indazol-6-yl, 1-(methoxycarbonyl)piperidin-3-yl, 1-methyl-5-oxo-pyrrolidin-3-yl, 2-oxabicyclo[2.2.2]octan-4-yl, 2-oxaspiro[3.3]heptan-6-yl, 1-methyl-2-oxabicyclo[2.1.1]hexan-4-yl, 3- (1-hydroxy-1-methyl-ethyl)-1-bicyclo[1.1.1]pentanyl, 3-methylcyclobutyl, 3-(trifluoromethyl)cyclobutyl, 3-hydroxy-3-(trifluoromethyl)cyclobutyl, 1-bicyclo[2.2.2]octanyl, 4-hydroxy-1-bicyclo[2.2.2]octanyl, 3- hydroxycyclohexyl, 3-(difluoromethoxy)cyclobutyl, 3-(hydroxymethyl)cyclobutyl, 3-cyanocyclobutyl, or 3,3-difluorocyclobutyl. In certain embodiments, R5or ring A is 5-fluoropyrimidin-4-yl, 5- fluoropyrimidin-2-yl, 5-cyanopyrimidin-2-yl, 5-chloropyrimidin-2-yl, pyrimidin-2-yl, 5-fluoropyrimidin- 4-yl, 5-cyano-3-fluoropyridin-2-yl, 5-chloro-3-fluoropyridin-2-yl, 3-fluoro-5-(trifluoromethyl)pyridin-2- yl, 6-chloropyridazin-3-yl, 3-fluoropyridin-4-yl, 3,5-difluoro-2-pyridyl, 3-(trifluoromethyl)-1- bicyclo[1.1.1]pentanyl, 1-cyclobutylpiperidin-3-yl, 3-cyano-1-bicyclo[1.1.1]pentanyl, 4,4- difluorocyclohexyl, (1R,2R,4S)-7-oxabicyclo[2.2.1]heptan-2-yl, (1S,2R,4R)-7-oxabicyclo[2.2.1]heptan- 2-yl, 1-ethylpiperidin-3-yl, 3-hydroxy-3-methylcyclobutyl, 4,5,6,7-tetrahydropyrazolo[1,5-a]pyridin-5-yl, 1-methyl-6-oxo-3-piperidyl, 1-methyl-2-oxo-4-piperidyl, spiro[2.3]hexan-5-yl, 2- cyclopropyltetrahydropyran-4-yl, 1-(2-methoxyethyl)-3-piperidyl, or 1-cyclobutylpiperidin-3-yl.
[0132] In certain embodiments, R5or ring A is C3-10cycloalkyl optionally substituted with one to five Z1.
[0133] In certain embodiments, R5or ring A is bicyclo[1.1.1]pentanyl, cyclohexyl, cyclobutyl, spiro[2.3]hexanyl, or bicyclo[2.2.2]octanyl; wherein each is independently optionally substituted with one to five Z1. In certain embodiments, R5or ring A is bicyclo[1.1.1]pentanyl, cyclohexyl, cyclobutyl, or spiro[2.3]hexanyl; wherein each is independently optionally substituted with one to five Z1.
[0134] In certain embodiments, R5or ring A is 3-(trifluoromethyl)-1-bicyclo[1.1.1]pentanyl, 3-cyano-1- bicyclo[1.1.1]pentanyl, 4,4-difluorocyclohexyl, 3-hydroxy-3-methylcyclobutyl, spiro[2.3]hexan-5-yl, 3- (1-hydroxy-1-methyl-ethyl)-1-bicyclo[1.1.1]pentanyl, 3-methylcyclobutyl, 3-(trifluoromethyl)cyclobutyl, 3-hydroxy-3-(trifluoromethyl)cyclobutyl, 1-bicyclo[2.2.2]octanyl, 4-hydroxy-1-bicyclo[2.2.2]octanyl, 3- hydroxycyclohexyl, 3-(difluoromethoxy)cyclobutyl, 3-(hydroxymethyl)cyclobutyl, 3-cyanocyclobutyl, or 3,3-difluorocyclobutyl. In certain embodiments, R5or ring A is 3-(trifluoromethyl)-1- bicyclo[1.1.1]pentanyl, 3-cyano-1-bicyclo[1.1.1]pentanyl, 4,4-difluorocyclohexyl, 3-hydroxy-3- methylcyclobutyl, or spiro[2.3]hexan-5-yl; wherein each is independently optionally substituted with one to five Z1. In certain embodiments, R5or ring A is 3-(trifluoromethyl)-1-bicyclo[1.1.1]pentanyl, 3-cyano-1-bicyclo[1.1.1]pentanyl, 4,4-difluorocyclohexyl, 3-hydroxy-3-methylcyclobutyl, or spiro[2.3]hexan-5-yl.
[0135] In certain embodiments, R5or ring A is heterocyclyl optionally substituted with one to five Z1.
[0136] In certain embodiments, R5or ring A is piperidinyl, oxabicyclo[2.2.1]heptanyl, 4,5,6,7- tetrahydropyrazolo[1,5-a]pyridinyl, tetrahydropyranyl, 2-oxopiperidyl, 4,5,6,7-tetrahydroindazolyl, 5- oxo-pyrrolidin-3-yl, oxabicyclo[2.2.2]octanyl, oxaspiro[3.3]heptanyl, or oxabicyclo[2.1.1]hexanyl; wherein each is independently optionally substituted with one to five Z1. In certain embodiments, R5or ring A is piperidinyl, oxabicyclo[2.2.1]heptanyl, 4,5,6,7-tetrahydropyrazolo[1,5-a]pyridinyl, tetrahydropyranyl, or 2-oxopiperidyl; wherein each is independently optionally substituted with one to five Z1.
[0137] In certain embodiments, R5or ring A is 5-cyano-3-fluoropyridin-2-yl, 5-chloro-3-fluoropyridin- 2-yl, 1-cyclobutylpiperidin-3-yl, (1R,2R,4S)-7-oxabicyclo[2.2.1]heptan-2-yl, (1S,2R,4R)-7- oxabicyclo[2.2.1]heptan-2-yl, 1-ethylpiperidin-3-yl, 4,5,6,7-tetrahydropyrazolo[1,5-a]pyridin-5-yl, 1- methyl-6-oxo-3-piperidyl, 1-methyl-2-oxo-4-piperidyl, 2-cyclopropyltetrahydropyran-4-yl, 1-(2- methoxyethyl)-3-piperidyl, 1-ethyl-6-oxo-3-piperidyl, 4,5,6,7-tetrahydro-1H-indazol-6-yl, 1- (methoxycarbonyl)piperidin-3-yl, 1-methyl-5-oxo-pyrrolidin-3-yl, 2-oxabicyclo[2.2.2]octan-4-yl, 2- oxaspiro[3.3]heptan-6-yl, or 1-methyl-2-oxabicyclo[2.1.1]hexan-4-yl. In certain embodiments, R5or ring A is 5-cyano-3-fluoropyridin-2-yl, 5-chloro-3-fluoropyridin-2-yl, 1-cyclobutylpiperidin-3-yl, (1R,2R,4S)-7-oxabicyclo[2.2.1]heptan-2-yl, (1S,2R,4R)-7-oxabicyclo[2.2.1]heptan-2-yl, 1- ethylpiperidin-3-yl, 4,5,6,7-tetrahydropyrazolo[1,5-a]pyridin-5-yl, 1-methyl-6-oxo-3-piperidyl, 1-methyl- 2-oxo-4-piperidyl, 2-cyclopropyltetrahydropyran-4-yl, or 1-(2-methoxyethyl)-3-piperidyl.
[0138] In certain embodiments, R5or ring A is heteroaryl optionally substituted with one to five Z1.
[0139] In certain embodiments, R5or ring A is pyrimidinyl, pyridinyl, pyridazinyl, indazolyl, or indolyl; wherein each is independently optionally substituted with one to five Z1. In certain embodiments, R5or ring A is pyrimidinyl, pyridinyl, or pyridazinyl; wherein each is independently optionally substituted with one to five Z1.
[0140] In certain embodiments, R5or ring A is 5-fluoropyrimidin-4-yl, 5-fluoropyrimidin-2-yl, 5- cyanopyrimidin-2-yl, 5-chloropyrimidin-2-yl, pyrimidin-2-yl, 5-fluoropyrimidin-4-yl, 5-cyano-3- fluoropyridin-2-yl, 5-chloro-3-fluoropyridin-2-yl, 3-fluoro-5-(trifluoromethyl)pyridin-2-yl, 6- chloropyridazin-3-yl, 3-fluoropyridin-4-yl, 3,5-difluoro-2-pyridyl, 4,5,6,7-tetrahydropyrazolo[1,5- a]pyridin-5-yl, 5-(difluoromethoxy)-2-pyridyl, 3-fluoro-5-formylpyridin-2-yl, 5-pyrazol-1-ylpyrimidin-2- yl, 5-cyanopyridin-2-yl, 1-methyl-6-oxo-3-pyridyl, 1H-indazol-6-yl, or 1H-indol-6-yl. In certain embodiments, R5or ring A is 5-fluoropyrimidin-4-yl, 5-fluoropyrimidin-2-yl, 5-cyanopyrimidin-2-yl, 5- chloropyrimidin-2-yl, pyrimidin-2-yl, 5-fluoropyrimidin-4-yl, 5-cyano-3-fluoropyridin-2-yl, 5-chloro-3- fluoropyridin-2-yl, 3-fluoro-5-(trifluoromethyl)pyridin-2-yl, 6-chloropyridazin-3-yl, 3-fluoropyridin-4-yl, 3,5-difluoro-2-pyridyl, or 4,5,6,7-tetrahydropyrazolo[1,5-a]pyridin-5-yl.
[0141] In certain embodiments, each Z1ais independently halo.
[0142] In certain embodiments, each Z1is independently halo, hydroxy, C1-6alkyl, C1-6haloalkyl, C3-10cycloalkyl, or -C(O)OR11.
[0143] In certain embodiments, each R11is independently hydrogen, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl.
[0144] In certain embodiments, each R11is independently hydrogen or C1-6alkyl. In certain embodiments, each R11is hydrogen.
[0145] In certain embodiments, R12is C1-6alkyl, C2-6alkenyl, C2-6alkynyl, or C1-6haloalkyl. In certain embodiments, R12is C1-6alkyl, C2-6alkenyl, C2-6alkynyl, or C1-6haloalkyl.
[0146] In certain embodiments, each R13is independently hydrogen, C1-6alkyl, C2-6alkenyl, C2-6alkynyl, C1-6haloalkyl, C3-10cycloalkyl, heterocyclyl, aryl, or heteroaryl. In certain embodiments, each R13is independently hydrogen or C1-6alkyl.
[0147] In certain embodiments, provided is a compound selected from Table 1, or a pharmaceutically acceptable salt, isotopically enriched analog, prodrug, stereoisomer, or a mixture of stereoisomers thereof: Table 1
[0148] Absolute stereochemistry was assigned for certain compounds described herein as shown in Table 1A. Absolute stereochemistry was determined by co-crystallization using methods adapted from Sharif H., et al. Structural mechanism for NEK7-licensed activation of NLRP3 inflammasome. Nature, 2019, 570(7761), 338-343, or by correlation to an assigned compound via the use of specific enantiomerically enriched starting materials. Accordingly, in certain embodiments, provided is a compound of Table 1A, or a pharmaceutically acceptable salt, isotopically enriched analog, or prodrug thereof: Table 1A
[0149] In certain embodiments, provided is a compound selected from Table 2 or a pharmaceutically acceptable salt, isotopically enriched analog, prodrug, stereoisomer, or a mixture of stereoisomers thereof:3. Methods
[0150] “Treatment” or “treating” is an approach for obtaining beneficial or desired results including clinical results. Beneficial or desired clinical results may include one or more of the following: a) inhibiting the disease or condition (e.g., decreasing one or more symptoms resulting from the disease or condition, and / or diminishing the extent of the disease or condition); b) slowing or arresting the development of one or more clinical symptoms associated with the disease or condition (e.g., stabilizing the disease or condition, preventing or delaying the worsening or progression of the disease or condition, and / or preventing or delaying the spread (e.g., metastasis) of the disease or condition); and / or c) relieving the disease, that is, causing the regression of clinical symptoms (e.g., ameliorating the disease state, providing partial or total remission of the disease or condition, enhancing effect of another medication, delaying the progression of the disease, increasing the quality of life, and / or prolonging survival.
[0151] “Prevention” or “preventing” means any treatment of a disease or condition that causes the clinical symptoms of the disease or condition not to develop. Compounds may, in some embodiments, be administered to a subject (including a human) who is at risk or has a family history of the disease or condition.
[0152] “Subject” refers to an animal, such as a mammal (including a human), that has been or will be the object of treatment, observation or experiment. The methods described herein may be useful in human therapy, and / or veterinary applications. In some embodiments, the subject is a mammal. In certain embodiments, the subject is a human.
[0153] The term “therapeutically effective amount” or “effective amount” of a compound described herein or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof means an amount sufficient to effect treatment when administered to a subject, to provide a therapeutic benefit such as amelioration of symptoms or slowing of disease progression. For example, a therapeutically effective amount may be an amount sufficient to decrease a symptom of a disease or condition of as described herein. The therapeutically effective amount may vary depending on the subject, and disease or condition being treated, the weight and age of the subject, the severity of the disease or condition, and the manner of administering, which can readily be determined by one of ordinary skill in the art.
[0154] The methods described herein may be applied to cell populations in vivo or ex vivo. “In vivo” means within a living individual, as within an animal or human. In this context, the methods described herein may be used therapeutically in an individual. “Ex vivo” means outside of a living individual. Examples of ex vivo cell populations include in vitro cell cultures and biological samples including fluid or tissue samples obtained from individuals. Such samples may be obtained by methods well known in the art. Exemplary biological fluid samples include blood, cerebrospinal fluid, urine, and saliva. In this context, the compounds and compositions described herein may be used for a variety of purposes, including therapeutic and experimental purposes. For example, the compounds and compositions described herein may be used ex vivo to determine the optimal schedule and / or dosing of administration of a compound of the present disclosure for a given indication, cell type, individual, and other parameters. Information gleaned from such use may be used for experimental purposes or in the clinic to set protocols for in vivo treatment. Other ex vivo uses for which the compounds and compositions described herein may be suited are described below or will become apparent to those skilled in the art. The compounds may be further characterized to examine the safety or tolerance dosage in human or non- human subjects. Such properties may be examined using commonly known methods to those skilled in the art.
[0155] In certain embodiments, provided are compounds, or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof, that modulate the activity of NLR Family Pyrin Domain Containing 3 (NLRP3). In certain embodiments, thecompounds provided herein, or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof, inhibit the activation of NLRP3.
[0156] NLR proteins are involved in the immune system, helping to start and regulate the immune system’s response to injury, toxins, or invasion by microorganisms. NLRP3 (also known as cryopyrin, NALP3, LRR and PYD domains-containing protein 3), is a protein encoded by the NLRP3 gene (also known as CIAS1). Once activated, NLRP3 molecules assemble, along with other proteins, into inflammasomes. The activation of NLRP3 by cellular stress leads to inflammasome activation and downstream proteolytic events, including the formation of active proinflammatory cytokines such as interleukin (IL)-1β and IL-18 which are then secreted. Among other cytokines, IL-1β and IL‐18 are known mediators of inflammation, e.g., artery wall inflammation, atherosclerosis and the aging process.
[0157] In certain embodiments, provided is a method of inhibiting inflammasome (e.g., the NLRP3 inflammasome) activity comprising contacting a cell with an effective amount of a compound disclosed herein, or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof. The inhibiting can be in vitro or in vivo.
[0158] In certain embodiments, provided is a compound as disclosed herein, or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof, for use in inhibiting inflammasome (e.g., the NLRP3 inflammasome) activity (e.g., in vitro or in vivo).
[0159] In certain embodiments, the present disclosure provides use of a compound as disclosed herein, or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof, in the manufacture of a medicament for inhibiting inflammasome (e.g., the NLRP3 inflammasome) activity (e.g., in vitro or in vivo).
[0160] Chronic inflammation responses have been associated with various types of cancer. During malignant transformation or cancer therapy, inflammasomes may become activated in response to certain signals; and IL-Ιβ expression is elevated in a variety of cancers (e.g., breast, prostate, colon, lung, head and neck cancers, melanomas, etc.), where patients with IL-Ιβ producing tumors generally have a worse prognosis.
[0161] In certain embodiments, provided is a method for treating a disease or condition mediated, at least in part, by NLRP3, comprising administering an effective amount of a compound disclosed herein, or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof, to a subject in need thereof.
[0162] In certain embodiments, provided is a method for treating a disease or condition selected from an autoinflammatory disorder, an autoimmune disorder, a neurodegenerative disease or cancer, comprising administering to a subject in need thereof a therapeutically effective amount of a compound disclosed herein, or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof.
[0163] In certain embodiments, provided is a compound as disclosed herein, or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof,for use in treating an autoinflammatory disorder, an autoimmune disorder, a neurodegenerative disease or cancer in a subject in need thereof.
[0164] In certain embodiments, the present disclosure provides use of a compound as disclosed herein, or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof in the manufacture of a medicament for treating or preventing an autoinflammatory disorder, an autoimmune disorder, a neurodegenerative disease or cancer in a subject in need thereof.
[0165] In certain embodiments, provided is a method for treating inflammation, an auto-immune disease, cancer, an infection, a central nervous system disease, a metabolic disease, a cardiovascular disease, a respiratory disease, a liver disease, a renal disease, an ocular disease, a skin disease, a lymphatic condition, a psychological disorder, graft versus host disease, allodynia, and any disease where an individual has been determined to carry a germline or somatic non-silent mutation in NLRP3, comprising administering to a subject in need thereof a therapeutically effective amount of a compound disclosed herein, or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof.
[0166] In certain embodiments, the disease or condition may be a disease or condition of the immune system, the cardiovascular system, the endocrine system, the gastrointestinal tract, the renal system, the hepatic system, the metabolic system, the respiratory system, the central nervous system, may be a cancer or other malignancy, and / or may be caused by or associated with a pathogen. It will be appreciated that these general embodiments defined according to broad categories of diseases, disorders and conditions are not mutually exclusive.
[0167] In certain embodiments, the disease or condition includes, inflammation, including inflammation occurring as a result of an inflammatory disorder, e.g. an autoinflammatory disease, inflammation occurring as a symptom of a non-inflammatory disorder, inflammation occurring as a result of infection, or inflammation secondary to trauma, injury or autoimmunity; auto-immune diseases such as acute disseminated encephalitis, Addison’s disease, ankylosing spondylitis, antiphospholipid antibody syndrome (APS), anti-synthetase syndrome, aplastic anemia, autoimmune adrenalitis, autoimmune hepatitis, autoimmune oophoritis, autoimmune polyglandular failure, autoimmune thyroiditis, Coeliac disease, Crohn’s disease, type 1 diabetes (T1D), Goodpasture’s syndrome, Graves’ disease, Guillain- Barré syndrome (GBS), Hashimoto’s disease, idiopathic thrombocytopenic purpura, Kawasaki’s disease, lupus erythematosus including systemic lupus erythematosus (SLE), multiple sclerosis (MS) including primary progressive multiple sclerosis (PPMS), secondary progressive multiple sclerosis (SPMS) and relapsing remitting multiple sclerosis (RRMS), myasthenia gravis, opsoclonus myoclonus syndrome (OMS), optic neuritis, Ord’s thyroiditis, pemphigus, pernicious anaemia, polyarthritis, primary biliary cirrhosis, rheumatoid arthritis (RA), psoriatic arthritis, juvenile idiopathic arthritis or Still’s disease, refractory gouty arthritis, Reiter’s syndrome, Sjögren’s syndrome, systemic sclerosis a systemic connective tissue disorder, Takayasu’s arteritis, temporal arteritis, warm autoimmune hemolytic anemia,Wegener’s granulomatosis, alopecia universalis, Behçet’s disease, Chagas’ disease, dysautonomia, endometriosis, hidradenitis suppurativa (HS), interstitial cystitis, neuromyotonia, psoriasis, sarcoidosis, scleroderma, ulcerative colitis, Schnitzler syndrome, macrophage activation syndrome, Blau syndrome, vitiligo or vulvodynia; cancer including lung cancer, pancreatic cancer, gastric cancer, myelodysplastic syndrome, leukemia including acute lymphocytic leukaemia (ALL) and acute myeloid leukaemia (AML), adrenal cancer, anal cancer, basal and squamous cell skin cancer, bile duct cancer, bladder cancer, bone cancer, brain and spinal cord tumors, breast cancer, cervical cancer, chronic lymphocytic leukaemia (CLL), chronic myeloid leukaemia (CML), chronic myelomonocytic leukaemia (CMML), colorectal cancer, endometrial cancer, oesophagus cancer, Ewing family of tumors, eye cancer, gallbladder cancer, gastrointestinal carcinoid tumours, gastrointestinal stromal tumor (GIST), gestational trophoblastic disease, glioma, Hodgkin lymphoma, Kaposi sarcoma, kidney cancer, laryngeal and hypopharyngeal cancer, liver cancer, lung carcinoid tumor, lymphoma including cutaneous T cell lymphoma, malignant mesothelioma, melanoma skin cancer, Merkel cell skin cancer, multiple myeloma, nasal cavity and paranasal sinuses cancer, nasopharyngeal cancer, neuroblastoma, non-Hodgkin lymphoma, non-small cell lung cancer, oral cavity and oropharyngeal cancer, osteosarcoma, ovarian cancer, penile cancer, pituitary tumours, prostate cancer, retinoblastoma, rhabdomyosarcoma, salivary gland cancer, skin cancer, small cell lung cancer, small intestine cancer, soft tissue sarcoma, stomach cancer, testicular cancer, thymus cancer, thyroid cancer including anaplastic thyroid cancer, uterine sarcoma, vaginal cancer, vulvar cancer, Waldenstrom macroglobulinemia, and Wilms tumor; infections including viral infections (e.g. from influenza virus, human immunodeficiency virus (HIV), alphavirus (such as Chikungunya and Ross River virus), flaviviruses (such as Dengue virus and Zika virus), herpes viruses (such as Epstein Barr Virus, cytomegalovirus, Varicella-zoster virus, and KSHV), poxviruses (such as vaccinia virus (Modified vaccinia virus Ankara) and Myxoma virus), adenoviruses (such as Adenovirus 5), or papillomavirus), bacterial infections (e.g. from Staphylococcus aureus, Helicobacter pylori, Bacillus anthracis, Bordatella pertussis, Burkholderia pseudomallei, Corynebacterium diptheriae, Clostridium tetani, Clostridium botulinum, Streptococcus pneumoniae, Streptococcus pyogenes, Listeria monocytogenes, Hemophilus influenzae, Pasteurella multicida, Shigella dysenteriae, Mycobacterium tuberculosis, Mycobacterium leprae, Mycoplasma pneumoniae, Mycoplasma hominis, Neisseria meningitidis, Neisseria gonorrhoeae, Rickettsia rickettsii, Legionella pneumophila, Klebsiella pneumoniae, Pseudomonas aeruginosa, Propionibacterium acnes, Treponema pallidum, Chlamydia trachomatis, Vibrio cholerae, Salmonella typhimurium, Salmonella typhi, Borrelia burgdorferi or Yersinia pestis), fungal infections (e.g. from Candida or Aspergillus species), protozoan infections (e.g. from Plasmodium, Babesia, Giardia, Entamoeba, Leishmania or Trypanosomes), helminth infections (e.g. from schistosoma, roundworms, tapeworms or flukes) and prion infections; central nervous system diseases such as Parkinson’s disease, Alzheimer’s disease, dementia, motor neuron disease, Huntington’s disease, cerebral malaria, brain injury from pneumococcal meningitis, intracranial aneurysms, traumatic brain injury, and amyotrophic lateral sclerosis; metabolic diseases such as type 2 diabetes (T2D), atherosclerosis, obesity, gout, andpseudo-gout; cardiovascular diseases such as hypertension, ischaemia, reperfusion injury including post- MI ischemic reperfusion injury, stroke including ischemic stroke, transient ischemic attack, myocardial infarction including recurrent myocardial infarction, heart failure including congestive heart failure and heart failure with preserved ejection fraction, embolism, aneurysms including abdominal aortic aneurysm, and pericarditis including Dressler’s syndrome; respiratory diseases including chronic obstructive pulmonary disorder (COPD), asthma such as allergic asthma and steroid-resistant asthma, asbestosis, silicosis, nanoparticle induced inflammation, cystic fibrosis and idiopathic pulmonary fibrosis; liver diseases including non-alcoholic fatty liver disease (NAFLD) and non-alcoholic steatohepatitis (NASH) including advanced fibrosis stages F3 and F4; alcoholic fatty liver disease (AFLD), and alcoholic steatohepatitis (ASH); renal diseases including chronic kidney disease, oxalate nephropathy, nephrocalcinosis, glomerulonephritis, and diabetic nephropathy; ocular diseases including those of the ocular epithelium, age-related macular degeneration (AMD) (dry and wet), uveitis, corneal infection, diabetic retinopathy, optic nerve damage, dry eye, and glaucoma; skin diseases including dermatitis such as contact dermatitis and atopic dermatitis, contact hypersensitivity, sunburn, skin lesions, hidradenitis suppurativa (HS), other cyst-causing skin diseases, and acne conglobata; lymphatic conditions such as lymphangitis and Castleman's disease; psychological disorders such as depression and psychological stress; graft versus host disease; allodynia including mechanical allodynia; and any disease where an individual has been determined to carry a germline or somatic non-silent mutation in NLRP3.
[0168] In certain embodiments, the disease, disorder or condition is an autoinflammatory disease such as cryopyrin-associated periodic syndromes (CAPS), Muckle-Wells syndrome (MWS), familial cold autoinflammatory syndrome (FCAS), familial Mediterranean fever (FMF), neonatal onset multisystem inflammatory disease (NOMID), tumor Necrosis Factor (TNF) Receptor-Associated Periodic Syndrome (TRAPS), hyperimmunoglobulinemia D and periodic fever syndrome (HIDS), deficiency of interleukin 1 receptor antagonist (DIRA), Majeed syndrome, pyogenic arthritis, pyoderma gangrenosum and acne syndrome (PAPA), adult-onset Still's disease (AOSD), haploinsufficiency of A20 (HA20), pediatric granulomatous arthritis (PGA), PLCG2-associated antibody deficiency and immune dysregulation (PLAID), PLCG2- associated autoinflammatory, antibody deficiency and immune dysregulation (APLAID), or sideroblastic anaemia with B-cell immunodeficiency, periodic fevers and developmental delay (SIFD).
[0169] In certain embodiments, provided is a method for treating a disease or condition selected from an autoinflammatory disorder and / or an autoimmune disorder selected from cryopyrin-associated autoinflammatory syndrome (CAPS; e.g., familial cold autoinflammatory syndrome (FCAS)), Muckle- Wells syndrome (MWS), chronic infantile neurological cutaneous and articular (CINCA) syndrome, neonatal-onset multisystem inflammatory disease (NOMID), familial Mediterranean fever and nonalcoholic fatty liver disease (NAFLD), non-alcoholic steatohepatitis (NASH), gout, rheumatoid arthritis, osteoarthritis, Crohn's disease, chronic obstructive pulmonary disease (COPD), chronic kidney disease (CKD), fibrosis, obesity, type 2 diabetes, and multiple sclerosis and neuroinflammation occurringin protein misfolding diseases (e.g., Prion diseases) comprising administering to a subject in need thereof a therapeutically effective amount of a compound disclosed herein, or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof.
[0170] In certain embodiments, provided is a method for treating a disease or condition selected from cryopyrin-associated periodic syndromes (CAPS), Muckle-Wells syndrome (MWS), familial cold autoinflammatory syndrome (FCAS), neonatal onset multisystem inflammatory disease (NOMID), familial Mediterranean fever (FMF), pyogenic arthritis, pyoderma gangrenosum and acne syndrome (PAPA); hyperimmunoglobulinemia D and periodic fever syndrome (HIDS), Tumour Necrosis Factor (TNF), Receptor-Associated Periodic Syndrome (TRAPS), systemic juvenile idiopathic arthritis, adult- onset Still’s disease (AOSD), relapsing polychondritis, Schnitzler’s syndrome, Sweet’s syndrome, Behcet’s disease, anti-synthetase syndrome, deficiency of interleukin 1 receptor antagonist (DIRA), and haploinsufficiency of A20 (HA20) comprising administering to a subject in need thereof a therapeutically effective amount of a compound disclosed herein, or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof.
[0171] In certain embodiments, provided is a method for treating a disease or condition selected from Alzheimer’s disease, atherosclerosis, asthma, allergic airway inflammation, cryopyrin-associated periodic syndromes, gout, inflammatory bowel disease and related disorders, nonalcoholic fatty liver disease (NAFLD), nonalcoholic steatohepatitis (NASH), hypertension, myocardial infarction, multiple sclerosis, experimental autoimmune encephalitis, oxalate-induced nephropathy, hyperinflammation following influenza infection, graft-versus-host disease, stroke, silicosis, type 1 diabetes, obesity-induced inflammation or insulin resistance, rheumatoid arthritis, myelodysplastic syndrome, contact hypersensitivity, joint inflammation triggered by chikungunya virus, or traumatic brain injury comprising administering to a subject in need thereof a therapeutically effective amount of a compound disclosed herein, or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof.
[0172] In certain embodiments, provided is a method for treating a disease or condition that is mediated, at least in part, by TNF-α. In certain embodiments, the disease or condition is resistant to treatment with an anti-TNF-α agent. In some embodiments, the disease is a gut disease or condition. In some embodiments the disease or condition is inflammatory bowel disease, Crohn’s disease, or ulcerative colitis. In some embodiments, a compound disclosed herein or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof is admistered in combination with an anti-TNF-α agent. In some embodiments, the anti-TNF-α agent is Infliximab, Etanercept, Certolizumab pegol, Golimumab, or Adalimumab.
[0173] In certain embodiments, the disease or condition is an autoinflammatory disorder, an autoimmune disorder, a neurodegenerative disease, or cancer.
[0174] In certain embodiments, the disease or condition is an autoinflammatory disorder and / or an autoimmune disorder.
[0175] In certain embodiments, the disease or condition is a neurodegenerative disease.
[0176] In certain embodiments, the disease or condition is Parkinson’s disease or Alzheimer’s disease.
[0177] In certain embodiments, provided is a method for treating cancer, comprising administering an effective amount of a compound disclosed herein, or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof, to a subject in need thereof.
[0178] In certain embodiments, the cancer is metastasizing cancer, gastrointestinal cancer, skin cancer, non-small-cell lung carcinoma, or colorectal adenocarcinoma.
[0179] In certain embodiments, provided is a compound as disclosed herein, or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof for use in treating a neurodegenerative disease (e.g., Parkinson's disease or Alzheimer's disease) in a subject in need thereof.
[0180] In certain embodiments, provided is a compound as disclosed herein, or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof, for use in treating cancer in a subject in need thereof.
[0181] In certain embodiments, a compound as disclosed herein, or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof, may be administered alone as a sole therapy or can be administered in addition with one or more other substances and / or treatments. Such conjoint treatment may be achieved by way of the simultaneous, sequential or separate administration of the individual components of the treatment.
[0182] For example, therapeutic effectiveness may be enhanced by administration of an adjuvant (i.e., by itself the adjuvant may only have minimal therapeutic benefit, but in combination with another therapeutic agent, the overall therapeutic benefit to the individual is enhanced). Alternatively, by way of example only, the benefit experienced by an individual may be increased by administering compound as disclosed herein, or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof, with another therapeutic agent (which also includes a therapeutic regimen) that also has therapeutic benefit.
[0183] Other embodiments include use of the presently disclosed compounds in therapy. 4. Kits
[0184] Provided herein are also kits that include a compound of the disclosure, or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof, and suitable packaging. In certain embodiments, a kit further includes instructions for use. In one aspect, a kit includes a compound of the disclosure, or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof, and a label and / or instructions for use of the compounds in the treatment of the indications, including the diseases or conditions, described herein.
[0185] Provided herein are also articles of manufacture that include a compound described herein or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, orprodrug thereof in a suitable container. The container may be a vial, jar, ampoule, preloaded syringe, or intravenous bag. 5. Pharmaceutical Compositions and Modes of Administration
[0186] Compounds provided herein are usually administered in the form of pharmaceutical compositions. Thus, provided herein are also pharmaceutical compositions that contain one or more of the compounds described herein, or a pharmaceutically acceptable salt, stereoisomer, mixture of stereoisomers, or prodrug thereof, and one or more pharmaceutically acceptable vehicles selected from carriers, adjuvants, and excipients. Suitable pharmaceutically acceptable vehicles may include, for example, inert solid diluents and fillers, diluents, including sterile aqueous solution and various organic solvents, permeation enhancers, solubilizers, and adjuvants. Such compositions are prepared in a manner well known in the pharmaceutical art. See, e.g., Remington’s Pharmaceutical Sciences, Mace Publishing Co., Philadelphia, Pa.17th Ed. (1985); and Modern Pharmaceutics, Marcel Dekker, Inc.3rd Ed. (G.S. Banker & C.T. Rhodes, Eds.).
[0187] The pharmaceutical compositions may be administered in either single or multiple doses. The pharmaceutical composition may be administered by various methods including, for example, rectal, buccal, intranasal, and transdermal routes. In certain embodiments, the pharmaceutical composition may be administered by intra-arterial injection, intravenously, intraperitoneally, parenterally, intramuscularly, subcutaneously, orally, topically, or as an inhalant.
[0188] One mode for administration is parenteral, for example, by injection. The forms in which the pharmaceutical compositions described herein may be incorporated for administration by injection include, for example, aqueous or oil suspensions, or emulsions, with sesame oil, corn oil, cottonseed oil, or peanut oil, as well as elixirs, mannitol, dextrose, or a sterile aqueous solution, and similar pharmaceutical vehicles.
[0189] Oral administration may be another route for administration of the compounds described herein. Administration may be via, for example, capsule or enteric coated tablets. In making the pharmaceutical compositions that include at least one compound described herein or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof, the active ingredient is usually diluted by an excipient and / or enclosed within such a carrier that can be in the form of a capsule, sachet, paper or other container. When the excipient serves as a diluent, it can be in the form of a solid, semi-solid, or liquid material, which acts as a vehicle, carrier or medium for the active ingredient. Thus, the compositions can be in the form of tablets, pills, powders, lozenges, sachets, cachets, elixirs, suspensions, emulsions, solutions, syrups, aerosols (as a solid or in a liquid medium), ointments containing, for example, up to 10% by weight of the active compound, soft and hard gelatin capsules, sterile injectable solutions, and sterile packaged powders.
[0190] Some examples of suitable excipients include, e.g., lactose, dextrose, sucrose, sorbitol, mannitol, starches, gum acacia, calcium phosphate, alginates, tragacanth, gelatin, calcium silicate, microcrystalline cellulose, polyvinylpyrrolidone, cellulose, sterile water, syrup, and methyl cellulose. The formulationscan additionally include lubricating agents such as talc, magnesium stearate, and mineral oil; wetting agents; emulsifying and suspending agents; preserving agents such as methyl and propylhydroxy- benzoates; sweetening agents; and flavoring agents.
[0191] The compositions that include at least one compound described herein or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof can be formulated so as to provide quick, sustained or delayed release of the active ingredient after administration to the subject by employing procedures known in the art. Controlled release drug delivery systems for oral administration include osmotic pump systems and dissolutional systems containing polymer-coated reservoirs or drug-polymer matrix formulations. Another formulation for use in the methods disclosed herein employ transdermal delivery devices (“patches”). Such transdermal patches may be used to provide continuous or discontinuous infusion of the compounds described herein in controlled amounts. The construction and use of transdermal patches for the delivery of pharmaceutical agents is well known in the art. Such patches may be constructed for continuous, pulsatile, or on demand delivery of pharmaceutical agents.
[0192] For preparing solid compositions such as tablets, the principal active ingredient may be mixed with a pharmaceutical excipient to form a solid preformulation composition containing a homogeneous mixture of a compound described herein or a pharmaceutically acceptable salt, isotopically enriched analog, stereoisomer, mixture of stereoisomers, or prodrug thereof. When referring to these preformulation compositions as homogeneous, the active ingredient may be dispersed evenly throughout the composition so that the composition may be readily subdivided into equally effective unit dosage forms such as tablets, pills, and capsules.
[0193] The tablets or pills of the compounds described herein may be coated or otherwise compounded to provide a dosage form affording the advantage of prolonged action, or to protect from the acid conditions of the stomach. For example, the tablet or pill can include an inner dosage and an outer dosage component, the latter being in the form of an envelope over the former. The two components can be separated by an enteric layer that serves to resist disintegration in the stomach and permit the inner component to pass intact into the duodenum or to be delayed in release. A variety of materials can be used for such enteric layers or coatings, such materials including a number of polymeric acids and mixtures of polymeric acids with such materials as shellac, cetyl alcohol, and cellulose acetate.
[0194] Compositions for inhalation or insufflation may include solutions and suspensions in pharmaceutically acceptable, aqueous or organic solvents, or mixtures thereof, and powders. The liquid or solid compositions may contain suitable pharmaceutically acceptable excipients as described herein. In some embodiments, the compositions are administered by the oral or nasal respiratory route for local or systemic effect. In other embodiments, compositions in pharmaceutically acceptable solvents may be nebulized by use of inert gases. Nebulized solutions may be inhaled directly from the nebulizing device or the nebulizing device may be attached to a facemask tent, or intermittent positive pressure breathingmachine. Solution, suspension, or powder compositions may be administered, preferably orally or nasally, from devices that deliver the formulation in an appropriate manner. 6. Dosing
[0195] The specific dose level of a compound of the present application for any particular subject will depend upon a variety of factors including the activity of the specific compound employed, the age, body weight, general health, sex, diet, time of administration, route of administration, and rate of excretion, drug combination and the severity of the particular disease in the subject undergoing therapy. For example, a dosage may be expressed as a number of milligrams of a compound described herein per kilogram of the subject’s body weight (mg / kg). Dosages of between about 0.1 and 150 mg / kg may be appropriate. In some embodiments, about 0.1 and 100 mg / kg may be appropriate. In other embodiments a dosage of between 0.5 and 60 mg / kg may be appropriate. In some embodiments, a dosage of from about 0.0001 to about 100 mg per kg of body weight per day, from about 0.001 to about 50 mg of compound per kg of body weight, or from about 0.01 to about 10 mg of compound per kg of body weight may be appropriate. Normalizing according to the subject’s body weight is particularly useful when adjusting dosages between subjects of widely disparate size, such as occurs when using the drug in both children and adult humans or when converting an effective dosage in a non-human subject such as dog to a dosage suitable for a human subject. 7. Synthesis of the Compounds
[0196] The compounds may be prepared using the methods disclosed herein and routine modifications thereof, which will be apparent given the disclosure herein and methods well known in the art. Conventional and well-known synthetic methods may be used in addition to the teachings herein. The synthesis of typical compounds described herein may be accomplished as described in the following examples. If available, reagents and starting materials may be purchased commercially, e.g., from Sigma Aldrich or other chemical suppliers.
[0197] It will be appreciated that where typical or preferred process conditions (i.e., reaction temperatures, times, mole ratios of reactants, solvents, pressures, etc.) are given, other process conditions can also be used unless otherwise stated. Optimum reaction conditions may vary with the particular reactants or solvent used, but such conditions can be determined by one skilled in the art by routine optimization procedures.
[0198] Additionally, conventional protecting groups (“PG”) may be necessary to prevent certain functional groups from undergoing undesired reactions. Suitable protecting groups for various functional groups as well as suitable conditions for protecting and deprotecting particular functional groups are well known in the art. For example, numerous protecting groups are described in Wuts, P. G. M., Greene, T. W., & Greene, T. W. (2006). Greene's protective groups in organic synthesis. Hoboken, N.J., Wiley- Interscience, and references cited therein. For example, protecting groups for alcohols, such as hydroxy, include silyl ethers (including trimethylsilyl (TMS), tert-butyldimethylsilyl (TBDMS), tri-iso- propylsilyloxymethyl (TOM), and triisopropylsilyl (TIPS) ethers), which can be removed by acid orfluoride ion, such as NaF, TBAF (tetra-n-butylammonium fluoride), HF-Py, or HF-NEt3. Other protecting groups for alcohols include acetyl, removed by acid or base, benzoyl, removed by acid or base, benzyl, removed by hydrogenation, methoxyethoxymethyl ether, removed by acid, dimethoxytrityl, removed by acid, methoxymethyl ether, removed by acid, tetrahydropyranyl or tetrahydrofuranyl, removed by acid, and trityl, removed by acid. Examples of protecting groups for amines include carbobenzyloxy, removed by hydrogenolysis p-methoxybenzyl carbonyl, removed by hydrogenolysis, tert-butyloxycarbonyl, removed by concentrated strong acid (such as HCl or CF3COOH), or by heating to greater than about 80 °C, 9-fluorenylmethyloxycarbonyl, removed by base, such as piperidine, acetyl, removed by treatment with a base, benzoyl, removed by treatment with a base, benzyl, removed by hydrogenolysis, carbamate group, removed by acid and mild heating, p-methoxybenzyl, removed by hydrogenolysis, 3,4-dimethoxybenzyl, removed by hydrogenolysis, p-methoxyphenyl, removed by ammonium cerium(IV) nitrate, tosyl, removed by concentrated acid (such as HBr or H2SO4) and strong reducing agents (sodium in liquid ammonia or sodium naphthalenide), troc (trichloroethyl chloroformate), removed by Zn insertion in the presence of acetic acid, and sulfonamides (Nosyl & Nps), removed by samarium iodide or tributyltin hydride.
[0199] Furthermore, the compounds of this disclosure may contain one or more chiral centers. Accordingly, if desired, such compounds can be prepared or isolated as pure stereoisomers, i.e., as individual enantiomers or diastereomers or as stereoisomer-enriched mixtures. All such stereoisomers (and enriched mixtures) are included within the scope of this disclosure, unless otherwise indicated. Pure stereoisomers (or enriched mixtures) may be prepared using, for example, optically active starting materials or stereoselective reagents well-known in the art. Alternatively, racemic mixtures of such compounds can be separated using, for example, chiral column chromatography, chiral resolving agents, and the like.
[0200] The starting materials for the following reactions are generally known compounds or can be prepared by known procedures or obvious modifications thereof. For example, many of the starting materials are available from commercial suppliers such as Aldrich Chemical Co. (Milwaukee, Wisconsin, USA), Bachem (Torrance, California, USA), Emka-Chemce or Sigma (St. Louis, Missouri, USA). Others may be prepared by procedures or obvious modifications thereof, described in standard reference texts such as Fieser and Fieser's Reagents for Organic Synthesis, Volumes 1-15 (John Wiley, and Sons, 1991), Rodd's Chemistry of Carbon Compounds, Volumes 1-5, and Supplementals (Elsevier Science Publishers, 1989) organic Reactions, Volumes 1-40 (John Wiley, and Sons, 1991), March's Advanced Organic Chemistry, (John Wiley, and Sons, 5th Edition, 2001), and Larock's Comprehensive Organic Transformations (VCH Publishers Inc., 1989). General Synthesis
[0201] Scheme I illustrates a general methods which can be employed for the synthesis of compounds described herein, where each of A1, A2, A3, A4, R2, R3, R4, R5, R6, R7, R9, and R10are each independently as defined herein, each Rzis independently hydrogen or C1-6alkyl, and LG is a leaving group (e.g., halo).It should be understood that derivatization of any one or more of compounds I-1 and I-5, or any product obtained by the process outlined in Scheme I, can be performed to provide various compounds of Formula I. Scheme I
[0202] In Scheme I, compounds of formula I can be prepared from compound I-1 by coupling with compound I-2. Alternatively, coupling of compound I-1 with compound I-3 provides compound I-4. An appropriately substituted amine I-5 can be coupled directly with compound I-4 under amide bond forming reaction conditions to yield compounds of formula I. Alternatively, when Rzis C1-6alkyl, the ester can be cleaved to yield the corresponding carboxylic acid derivative, which upon reaction with an appropriately substituted amine I-5 under amide bond forming reaction conditions, yields compounds of formula I.
[0203] Appropriate starting materials and reagents can be purchased or prepared by methods known to one of skill in the art. Upon each reaction completion, each of the intermediate or final compounds can be recovered, and optionally purified, by conventional techniques such as neutralization, extraction, precipitation, chromatography, filtration and the like.
[0204] In some embodiments, the various substituents of compounds I-1, I-2, I-3, I-4, and I-5 as used in Scheme I are as defined for Formula I. However, derivatization of compounds I-1, I-2, I-3, I-4, and I-5 provides various compounds of Formula I.
[0205] In certain embodiments, provided is a process for preparing a compound of Formula I, comprising: contacting a compound of Formula I-1 with a compound of Formula I-2, under conditions suitable to provide a compound of Formula I.
[0206] In certain embodiments, provided is a process for preparing a compound of Formula I, comprising:contacting a compound of Formula I-4 with a compound of Formula I-5, under conditions suitable to provide a compound of Formula I.
[0207] In certain embodiments, provided is a process for preparing a compound of Formula I, comprising: contacting a compound of Formula I-1 with a compound of Formula I-3, under conditions suitable to provide a compound of Formula I-4; and contacting a compound of Formula I-4 with a compound of Formula I-5, under conditions suitable to provide a compound of Formula I. EXAMPLES
[0208] The following examples are included to demonstrate specific embodiments of the disclosure. It should be appreciated by those of skill in the art that the techniques disclosed in the examples which follow represent techniques to function well in the practice of the disclosure, and thus can be considered to constitute specific modes for its practice. However, those of skill in the art should, in light of the present disclosure, appreciate that many changes can be made in the specific embodiments which are disclosed and still obtain a like or similar result without departing from the spirit and scope of the disclosure. General Experimental Methods
[0209] All solvents used were commercially available and were used without further purification. Reactions were typically run using anhydrous solvents under an inert atmosphere of nitrogen.
[0210] NMR Spectroscopy:1H Nuclear magnetic resonance (NMR) spectroscopy was carried out using a Bruker Avance III equipped with a BBFO 300 MHz probe operating at 300 MHz or one of the following instruments: a Bruker Avance 400 instrument equipped with probe DUAL 400 MHz S1, a Bruker Avance 400 instrument equipped with probe 6 S1400 MHz 5mm1H-13C ID, a Bruker Avance III 400 instrument with nanobay equipped with probe Broadband BBFO 5 mm direct, a Bruker Mercury Plus 400 NMR spectrometer equipped with a Bruker 400 BBO probe operating at 400 MHz. All deuterated solvents contained typically 0.03% to 0.05% v / v tetramethylsilane, which was used as the reference signal (set at δ 0.00 for both1H and13C). In certain cases,1H Nuclear magnetic resonance (NMR) spectroscopy was carried out using a Bruker Advance 400 instrument operating at 400 MHz using the stated solvent at around room temperature unless otherwise stated. In all cases, NMR data were consistent with the proposed structures. Characteristic chemical shifts (δ) are given in parts-per-million using conventional abbreviations for designation of major peaks: e.g. s, singlet; d, doublet; t, triplet; q, quartet; dd, doublet of doublets; dt, doublet of triplets; br, broad.
[0211] Thin Layer Chromatography: Where thin layer chromatography (TLC) has been used it refers to silica gel TLC using silica gel F254 (Merck) plates, Rf is the distance travelled by the compound divided by the distance travelled by the solvent on a TLC plate. Column chromatography was performed using an automatic flash chromatography system over silica gel cartridges or in the case of reverse phase chromatography over C18 cartridges. Alternatively, thin layer chromatography (TLC) was performed onAlugram® (Silica gel 60 F254) from Mancherey-Nagel and UV was typically used to visualize the spots. Additional visualization methods were also employed in some cases. In these cases the TLC plate was developed with iodine (generated by adding approximately 1 g of I2 to 10 g silica gel and thoroughly mixing), ninhydrin (available commercially from Aldrich), or Magic Stain (generated by thoroughly mixing 25 g (NH4)6Mo7O24.4H2O, 5 g (NH4)2Ce(IV)(NO3)6in 450 mL water and 50 mL concentrated H2SO4) to visualize the compound.
[0212] Liquid Chromatography-Mass Spectrometry and HPLC Analysis: HPLC analysis was performed on Shimadzu 20AB HPLC system with a photodiode array detector and Luna-C18(2) 2.0×50 mm, 5 µm column at a flow rate of 1.2 mL / min with a gradient solvent Mobile phase A (MPA, H2O+0.037 % (v / v) TFA): Mobile phase B (MPB, ACN+0.018 % (v / v) TFA) (0.01 min, 10% MPB; 4 min, 80% MPB; 4,9 min, 80% MPB; 4.92 min, 10% MPB; 5.5 min, 10% MPB). LCMS was detected under 220 and 254 nm or used evaporative light scattering (ELSD) detection as well as positive electrospray ionization (MS). Semi-preparative HPLC was performed by either acidic or neutral conditions. Acidic: Luna C18100 × 30 mm, 5 μm; MPA: HCl / H2O=0.04%, or formic acid / H2O=0.2% (v / v); MPB: ACN. Neutral: Waters Xbridge 150 × 25, 5 μm; MPA: 10 mM NH4HCO3 in H2O; MPB: ACN. Gradient for both conditions: 10% of MPB to 80% of MPB over 12 min at a flow rate of 20 mL / min, then 100% MPB over 2 min, 10% MPB over 2 min, UV detector. SFC analysis was performed on Thar analytical SFC system with a UV / Vis detector and series of chiral columns including AD, AS-H, OJ, OD, AY and IC, 4.6 × 100 mm, 3 µm column at a flow rate of 4 mL / min with a gradient solvent Mobile phase A (MPA, CO2): Mobile phase B (MPB, MeOH+0.05 % (v / v) IPAm) (0.01 min, 10% MPB; 3 min, 40% MPB; 3.5 min, 40% MPB; 3.56-5 min, 10% MPB). SFC preparative was performed on Thar 80 preparative SFC system with a UV / Vis detector and series of chiral preparative columns including AD-H, AS-H, OJ-H, OD-H, AY-H and IC-H, 30×250 mm, 5 µm column at a flow rate of 65 mL / min with a gradient solvent Mobile phase A (MPA, CO2): Mobile phase B (MPB, MeOH+0.1 % (v / v) NH3H2O) (0.01 min, 10% MPB; 5 min, 40% MPB; 6 min, 40% MPB; 6.1-10 min, 10% MPB). LC-MS data were also collected using an UPLC-MS AcquityTMsystem equipped with PDA detector and coupled to a Waters single quadrupole mass spectrometer operating in alternated positive and negative electrospray ionization mode. The column used was a Cortecs UPLC C18, 1.6 µm, 2.1 × 50 mm. A linear gradient was applied, starting at 95% A (A: 0.1% formic acid in water) and ending at 95% B (B: 0.1% formic acid in MeCN) over 2.0 min with a total run time of 2.5 min. The column temperature was at 40 ºC with the flow rate of 0.8 mL / min. Intermediate 1 6-bromospiro[2,3-dihydroisoquinoline-4,1'-cyclopropane]-1-one
[0213] Methyl 4-bromo-2-(cyanomethyl)benzoate: A solution of NaCN (8.4 g, 170 mmol) in H2O (40 mL) was added dropwise to a solution of methyl 4-bromo-2-(bromomethyl)benzoate (35 g, 114 mmol) in DMSO (500 mL) at 0 °C. The reaction mixture was stirred at 20 °C for 1 h. The reaction mixture was poured into H2O (1.5 L) and extracted with EtOAc (3 × 200 mL). The combined organic layers were washed with brine (3 × 200 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography.1H NMR (400 MHz, CDCl3): δ 7.93 (d, J = 8.4 Hz, 1H), 7.73 (d, J = 2.0 Hz, 1H), 7.57 (dd, J = 2.0, 8.8 Hz, 1H), 4.20 (s, 2H), 3.92 (s, 3H).
[0214] Methyl 4-bromo-2-(1-cyanocyclopropyl)benzoate: Methyl 4-bromo-2-(cyanomethyl)benzoate (9.0 g, 35.4 mmol) was added to a solution of NaH (3.26 g, 81.5 mmol, 60% purity) in DMSO (90 mL). The reaction mixture was stirred at 20 °C for 1 h before the addition of 1-bromo-2-chloroethane (8.13 g, 56.7 mmol). The resultant mixture was stirred at 20 °C for a further 8 h. The reaction mixture was cooled to 0 °C, diluted with saturated aqueous NH4Cl (200 mL), and extracted with EtOAc (4 × 50 mL). The combined organic layers were washed with brine (3 × 30 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography. LCMS: m / z = 280.0, 282.0 [M+H]+.
[0215] 6-bromospiro[2,3-dihydroisoquinoline-4,1'-cyclopropane]-1-one: To a mixture of methyl 4- bromo-2-(1-cyanocyclopropyl)benzoate (2.50 g, 8.92 mmol) and dichlorocobalt (2.32 g, 17.9 mmol) in MeOH (40 mL) was added NaBH4 (1.70 g, 44.9 mmol) at 0 °C. The reaction mixture was stirred at 20 °C for 3 h. The reaction mixture was cooled to 0 °C, diluted with saturated aqueous NH4Cl (50 mL), and extracted with DCM (4 × 15 mL). The combined organic layers were washed with brine (20 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography. LCMS: m / z = 252.0, 254.0 [M+H]+. Intermediate 2 Methyl 2-(6-bromo-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)acetate
[0216] To a solution of 6-bromospiro[2,3-dihydroisoquinoline-4,1'-cyclopropane]-1-one (2.30 g, 9.12 mmol) in DMF (30 mL) was added NaH (401 mg, 10.0 mmol, 60% purity) at 0 °C. The reaction mixture was stirred at 0 °C for 0.5 h before the addition of methyl 2-bromoacetate (2.09 g, 13.7 mmol). The reaction mixture was then stirred at 20 °C for a further 2 h. The reaction mixture was cooled to 0 °C, diluted with saturated aqueous NH4Cl (50 mL), and extracted with EtOAc (4 × 20 mL). The combined organic layers were washed with brine (3 × 15 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography. LCMS: m / z = 324.0, 326.0 [M+H]+.1H NMR (400 MHz, CDCl3): δ 7.98 (d, J = 8.4 Hz, 1H), 7.44 (dd, J= 2.0, 8.4 Hz, 1H), 6.99 (d, J = 2.0 Hz, 1H), 4.33 (s, 2H), 3.76 (s, 3H), 3.45 (s, 2H), 1.14-1.09 (m, 2H), 1.08-1.03 (m, 2H). Intermediate 3 2-(6-bromo-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)acetic acid
[0217] To a solution of methyl 2-(6-bromo-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)acetate (330 mg, 1.02 mmol) in THF (5 mL) was added a solution of LiOH (2.04 mL, 1 M in H2O). The reaction mixture was stirred at 20 °C for 3 h. The reaction mixture was adjusted pH to 4 using aqueous 1 N HCl and extracted with EtOAc (3 x 10 mL). The combined organic layers were washed with brine, dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure to provide a residue that was used directly. LCMS: m / z = 310.3, 312.3 [M+H]+. Intermediate 4 6-(trifluoromethyl)spiro[2,3-dihydroisoquinoline-4,1'-cyclopropane]-1-one
[0218] 2-(1-cyanocyclopropyl)-4-(trifluoromethyl)benzoic acid: To a solution of 2-fluoro-4- (trifluoromethyl)benzoic acid (2.00 g, 9.61 mmol) and cyclopropanecarbonitrile (1.93 g, 28.8 mmol) in THF (20 mL) at -40 °C was added dropwise KHMDS (25.0 mL, 1 M in THF). The reaction mixture was slowly warmed up to 20 °C then stirred at this temperature for 1 h. The reaction mixture was then heated to 70 °C and stirred for an additional 2 h. The reaction mixture was poured into H2O (20 mL) and washed with EtOAc (50 mL). The aqueous layer was then adjusted to pH = 3~4 by the addition of aqueous HCl (3 N). The aqueous was then extracted with EtOAc (3 × 20 mL). The combined organics were dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by reverse-phase HPLC.1H NMR (400 MHz, CDCl3): δ 8.26 (d, J = 8.0 Hz, 1H), 7.82-7.72 (m, 2H), 1.92- 1.84 (m, 2H), 1.46-1.38 (m, 2H).
[0219] Methyl 2-(1-cyanocyclopropyl)-4-(trifluoromethyl)benzoate: To a solution of 2-(1- cyanocyclopropyl)-4-(trifluoromethyl)benzoic acid (0.50 g, 1.96 mmol) in THF (10 mL) at 0 °C was added TMSCHN2(3.92 mmol, 2 M in n-hexane). The reaction mixture was stirred at 20 °C for 16 h. Thereaction mixture was quenched by the addition of AcOH (2 mL) and the resulting mixture was extracted with EtOAc (20 mL). The organic layer was washed with saturated aqueous NaHCO3(10 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography.1H NMR (400 MHz, CDCl3): δ 8.08 (d, J = 8.0 Hz, 1H), 7.75-7.67 (m, 2H), 4.11-3.99 (s, 3H), 1.84-1.78 (m, 2H), 1.38-1.32 (m, 2H).
[0220] 6-(trifluoromethyl)spiro[2,3-dihydroisoquinoline-4,1'-cyclopropane]-1-one: To a mixture of methyl 2-(1-cyanocyclopropyl)-4-(trifluoromethyl)benzoate (0.30 g, 1.11 mmol) and dichlorocobalt (289 mg, 2.23 mmol) in MeOH (5 mL) and THF (2 mL) at 0 °C was added NaBH4 (211 mg, 5.57 mmol). The reaction mixture was stirred at 20 °C for 2 h. The reaction mixture cooled to 0 °C, quenched by the addition of sat. aq. NH4Cl (10 mL), and extracted with EtOAc (3 × 10 mL). The organics were combined, dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to provide a residue that was used directly. LCMS: m / z = 242.1 [M+H]+
[0221] Methyl 2-[1-oxo-6-(trifluoromethyl)spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl]acetate: To a solution of 6-(trifluoromethyl)spiro[2,3-dihydroisoquinoline-4,1'-cyclopropane]-1-one (0.20 g, 0.83 mmol) in DMF (5.0 mL) at 0 °C was added NaH (36 mg, 0.91 mmol, 60% purity in mineral oil). The reaction mixture was stirred at 0 °C for 0.5 h followed by the addition of methyl 2-bromoacetate (190 mg, 1.24 mmol). The reaction mixture was stirred at 20 °C for a further 2 h. The reaction mixture was quenched by the addition of water (5 mL) and extracted with EtOAc (3 × 5 mL). These organics were combined, dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography.1H NMR (400 MHz, CDCl3): δ 8.23 (d, J = 8.0 Hz, 1H), 7.55 (d, J = 8.0 Hz, 1H), 7.08 (s, 1H), 4.35 (s, 2H), 3.76 (s, 3H), 3.48 (s, 2H), 1.21-1.06 (m, 4H). Intermediate 5 Methyl 2-(6-bromo-1-oxospiro[3H-isoquinoline-4,1'-cyclobutane]-2-yl)acetate
[0222] 4-bromo-2-(1-cyanocyclobutyl)benzoic acid: To a solution of 4-bromo-2-fluorobenzoic acid (1.0 g, 4.57 mmol) and cyclobutanecarbonitrile (1.11 g, 13.7 mmol) in THF (10 mL) at -40 °C was added KHMDS (11.88 mL, 1 M in THF). The reaction mixture was stirred at 25 °C for 1 h and then stirred at 40 °C for an additional 2 h. The reaction mixture was diluted with water (10 mL) and extracted with EtOAc (2 × 8 mL). The organic layers were discarded and the aqueous layer was adjusted to pH = 3 withaqueous HCl (3 N). The aqueous was then extracted with EtOAc (3 × 8 mL). The organics were combined, washed with brine (20 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure to provide a residue that was used directly.1H NMR (400 MHz, CDCl3): δ 7.95 (d, J = 8.4 Hz, 1H), 7.60-7.58 (m, 1H), 7.52 (d, J = 2.0 Hz, 1H) 2.65-2.38 (m, 6H).
[0223] Methyl 4-bromo-2-(1-cyanocyclobutyl)benzoate: To a solution of 4-bromo-2-(1- cyanocyclobutyl)benzoic acid (1.0 g, 3.57 mmol) in THF (8 mL) and MeOH (2 mL) at 0 °C was added TMSCHN2 (3.57 mL, 2 M in n-hexane). The reaction mixture was stirred at 25 °C for 2 h. The reaction mixture was quenched by addition of sat. aq. Na2S2O3 (50 mL) and extracted with EtOAc (3 × 50 mL). The combined organic layers were washed with brine (50 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography.1H NMR (400 MHz, CDCl3): δ 7.45 (d, J = 8.4 Hz, 1H), 7.54-7.51 (m, 1H), 7.47 (d, J = 2.0 Hz, 1H), 3.92 (s, 3H), 2.94-2.89 (m, 2H), 2.56-2.45 (m, 2H), 1.95-1.92(m, 2H).
[0224] 6-bromospiro[2,3-dihydroisoquinoline-4,1'-cyclobutane]-1-one: To a solution of methyl 4- bromo-2-(1-cyanocyclobutyl)benzoate (360 mg, 1.22 mmol) and dichlorocobalt (318 mg, 2.45 mmol) in MeOH (6 mL) at 0 °C was added NaBH4 (278 mg, 7.34 mmol). The reaction mixture was stirred at 20 °C for 3 h. The reaction mixture was cooled to 0 °C, diluted with sat. aq. NH4Cl (30 mL), and extracted with DCM (4 × 30 mL). The combined organic layers were washed with brine (30 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography.1H NMR (400 MHz, CDCl3): δ 7.93 (d, J = 8.4 Hz, 1H), 7.65 (d, J = 1.6 Hz, 1H) 7.55- 7.49 (m, 1H), 3.59-3.58 (m, 2H), 2.34-2.31 (m, 2H), 2.18-2.08 (m, 4H).
[0225] Methyl 2-(6-bromo-1-oxospiro[3H-isoquinoline-4,1'-cyclobutane]-2-yl)acetate: To a solution of 6-bromospiro[2,3-dihydroisoquinoline-4,1'-cyclobutane]-1-one (150 mg, 0.56 mmol) and methyl 2- bromoacetate (95 mg, 0.62 mmol) in DMF (1.5 mL) was added Cs2CO3 (276 mg, 0.845 mmol). The reaction mixture was stirred at 70 °C for 12 h. The reaction mixture was diluted with water (10 mL) and extracted with EtOAc (3 × 10 mL). The combined organic layers were washed with brine (10 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography.1H NMR (400 MHz, CDCl3): δ 7.95 (d, J = 8.4 Hz, 1H), 7.64 (d, J = 2.0 Hz, 1H), 7.53-7.47 (m, 1H), 4.36 (s, 1H), 4.25 (s, 1H), 3.78-3.77 (m, 3H), 3.69-3.68 (m, 2H), 2.38- 2.33 (m, 2H), 2.22-2.07 (m, 4H).Intermediate 6 Methyl 2-[2'-methyl-1-oxo-6-(trifluoromethyl)spiro[3H-isoquinoline-4,1'-cyclopropane]-2- yl]acetate
[0226] 2-(1-cyano-2-methylcyclopropyl)-4-(trifluoromethyl)benzoic acid: To a solution of 2-fluoro- 4-(trifluoromethyl)benzoic acid (2.00 g, 9.61 mmol) and 2-methylcyclopropanecarbonitrile (2.34 g, 28.8 mmol) in THF (20 mL) at -40 °C was added KHMDS (38.4 mmol, 1 M in THF, 38.44 mL). The reaction mixture was stirred at 25 °C for 0.5 h then stirred at 50 °C for a further 1 h. The reaction mixture was diluted with water (10 mL) and extracted with EtOAc (2 × 8 mL). The organic layers were discarded and the aqueous layer was adjusted to pH = 3 with aqueous HCl (3 N). The aqueous was then extracted with EtOAc (3 × 8 mL). The combined organics were dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure to give a residue that was used directly. LCMS: m / z = 268.1 [M-H]–.
[0227] Methyl 2-(1-cyano-2-methylcyclopropyl)-4-(trifluoromethyl)benzoate: To a solution of 2-(1- cyano-2-methylcyclopropyl)-4-(trifluoromethyl)benzoic acid (2.50 g, 9.29 mmol) in THF (20 mL) and MeOH (5 mL) at 0 °C was added TMSCHN2(9.29 mL, 2 M in n-hexane). The reaction mixture was stirred at 25 °C for 1 h. The reaction mixture was diluted with water (50 mL) and extracted with EtOAc (4 × 50 mL). The combined organic layers were washed with brine (30 mL), dried over anhydrous Na-2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography. LCMS: m / z = 284.0 [M+H]+.
[0228] 2'-methyl-6-(trifluoromethyl)spiro[2,3-dihydroisoquinoline-4,1'-cyclopropane]-1-one: To a solution of methyl 2-(1-cyano-2-methylcyclopropyl)-4-(trifluoromethyl)benzoate (1.00 g, 3.53 mmol) in MeOH (20 mL) at 0 °C were added NaBH4(801 mg, 21.2 mmol) and dichlorocobalt (917 mg, 7.06 mmol). The reaction mixture was stirred at 25 °C for 2 h. The reaction mixture was cooled to 0 °C, diluted with sat. aq. NH4Cl (50 mL), and extracted with EtOAc (4 × 50 mL). The combined organics were washed with brine (30 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography.1H NMR (400 MHz, DMSO- d6): δ 8.25 (br s, 1H), 8.04 (d, J = 8.0 Hz, 1H), 7.63 (d, J = 8.0 Hz, 1H), 7.27 (s, 1H), 3.53-3.49 (m, 1H), 3.23-3.20 (m, 1H), 1.54-1.47 (m, 1H), 1.22 (s, 3H), 1.98-1.92 (m, 1H), 0.76-0.68 (m, 1H).
[0229] Methyl 2-[2'-methyl-1-oxo-6-(trifluoromethyl)spiro[3H-isoquinoline-4,1'-cyclopropane]-2- yl]acetate: To a solution of 2'-methyl-6-(trifluoromethyl)spiro[2,3-dihydroisoquinoline-4,1'- cyclopropane]-1-one (0.4 g, 1.57 mmol) and methyl 2-bromoacetate (239.74 mg, 1.57 mmol) in DMF (5mL) was added Cs2CO3(765.93 mg, 2.35 mmol). The reaction mixture was stirred at 50 °C for 10 h. The reaction mixture was quenched with sat. aq. NH4Cl (50 mL) at 0 °C and extracted with EtOAc (4 × 50 mL). The combined organic layers were washed with brine (30 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure to give a residue. The residue was purified by silica gel column chromatography.1H NMR (400 MHz, DMSO-d6): δ 8.07 (d, J = 8.0 Hz, 1H), 7.66 (d, J = 8.0 Hz, 1H), 7.32 (s, 1H), 4.40-4.26 (m, 2H), 3.78 (d, J = 13.2 Hz, 1H), 3.68 (s, 3H), 3.53 (d, J = 13.2 Hz, 1H), 1.53-1.50 (m, 1H), 1.35-1.32 (m, 1H), 1.27 (d, J = 2.4 Hz, 3H), 0.78-0.75 (m, 1H). Intermediate 7 Methyl 2-[4-ethyl-4-methyl-1-oxo-6-(trifluoromethyl)-3H-isoquinolin-2-yl]acetate
[0230] 2-(2-cyanobutan-2-yl)-4-(trifluoromethyl)benzoic acid: To a solution of 2-fluoro-4- (trifluoromethyl)benzoic acid (7.00 g, 33.6 mmol) and 2-methylbutanenitrile (16.8 g, 201 mmol) in THF (70 mL) at -40 °C was added KHMDS (175 mL, 1 M in THF). The reaction mixture was stirred at 25 °C for 1 h then stirred at 40 °C for a further 2 h. The reaction mixture was diluted with water (100 mL) and extracted with EtOAc (3 × 10 mL). The aqueous was lyophilized to give a residue that was used directly. LCMS: m / z = 270.2 [M-H]–.
[0231] Methyl 2-(2-cyanobutan-2-yl)-4-(trifluoromethyl) benzoate: To a solution of 2-(2- cyanobutan-2-yl)-4-(trifluoromethyl) benzoic acid (5.00 g, 18.4 mmol) in DMF (50 mL) at 0 °C were added K2CO3(3.82 g, 27.7 mmol) and CH3I (3.92 g, 27.7 mmol). The reaction mixture was stirred at 25 °C for 1 h. The reaction mixture was diluted with sat. aq. NaHCO3(50 mL) and extracted with EtOAc (3 × 50 mL). The combined organics were washed with brine (50 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography. LCMS: m / z = 286.0 [M+H]+.
[0232] 4-ethyl-4-methyl-6-(trifluoromethyl)-2,3-dihydroisoquinolin-1-one: To a solution of methyl 2-(2-cyanobutan-2-yl)-4-(trifluoromethyl)benzoate (800 mg, 2.80 mmol) in MeOH (16 mL) at 0 °C were added NaBH4(637 mg, 16.8 mmol) and dichlorocobalt (364 mg, 2.80 mmol). The reaction mixture was stirred at 25 °C for 2 h. The reaction mixture was cooled to 0 °C, diluted with sat. aq. NH4Cl (15 mL), and extracted with EtOAc (3 × 15 mL). The combined organic layers were washed with brine (15 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography.1H NMR (400 MHz, CDCl3): δ 8.21 (d, J = 8.0 Hz, 1H),7.62 (d, J = 8.0 Hz, 1H), 7.52 (s, 1H), 6.78 (br s, 1H), 3.48-3.33 (m, 2H), 1.84-1.64 (m, 2H), 1.36 (s, 3H), 0.85 (t, J = 7.2 Hz, 3H).
[0233] Methyl 2-[4-ethyl-4-methyl-1-oxo-6-(trifluoromethyl)-3H-isoquinolin-2-yl]acetate: To a solution of 4-ethyl-4-methyl-6-(trifluoromethyl)-2,3-dihydroisoquinolin-1-one (200 mg, 0.78 mmol) in DMF (2 mL) were added methyl 2-bromoacetate (178 mg, 1.17 mmol) and Cs2CO3(507 mg, 1.55 mmol). The reaction mixture was stirred at 40 °C for 2 h. The reaction mixture was diluted with water (10 mL) and extracted with EtOAc (3 × 10 mL). The combined organics were washed with brine (10 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel preparatory TLC. LCMS: m / z = 330.1 [M+H]+. Intermediate 8 2-(trifluoromethyl)spiro[6,7-dihydro-1,6-naphthyridine-8,1'-cyclopropane]-5-one
[0234] Methyl 2-[3-bromo-6-(trifluoromethyl)-2-pyridyl]-2-cyano-acetate: To a solution of 3- bromo-2-chloro-6-(trifluoromethyl)pyridine (2.00 g, 7.68 mmol) in CH3CN (20 mL) were added methyl 2-cyanoacetate (1.52 g, 15.4 mmol) and Cs2CO3(7.51 g, 23.0 mmol). The reaction mixture was stirred at 70 °C for 12 h. The reaction mixture was diluted with water (100 mL) and extracted with EtOAc (3 × 80 mL). The combined organics were washed with brine (100 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography.1H NMR (400 MHz, CDCl3) δ 8.17 (d, J = 8.0 Hz, 1H), 7.64 (d, J = 8.4 Hz, 1H), 5.44 (s, 1H), 3.90 (s, 3H).
[0235] 2-(3-bromo-6-(trifluoromethyl)pyridin-2-yl)acetonitrile: To a solution of methyl 2-[3-bromo- 6-(trifluoromethyl)-2-pyridyl]-2-cyano-acetate (1.60 g, 4.75 mmol) in DMSO (16 mL) was added a solution of NaCl (2.77 g, 47.5 mmol) in water (16 mL). The reaction mixture was stirred at 120 °C for 12 h. The reaction mixture was cooled to ambient temperature, diluted with water (80 mL) and extracted with EtOAc (3 × 60 mL). The combined organics were washed with brine (100 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure to provide a residue that was used directly.1H NMR (400 MHz, CDCl3) δ 8.17 (d, J = 8.0 Hz, 1H), 7.64 (d, J = 8.0 Hz, 1H), 4.14 (s, 2H).
[0236] 1-(3-bromo-6-(trifluoromethyl)pyridin-2-yl)cyclopropanecarbonitrile: To a mixture of 2-(3- bromo-6-(trifluoromethyl)pyridin-2-yl)acetonitrile (900 mg, 3.40 mmol) in DMF (10 mL) was added NaH (408 mg, 10.2 mmol, 60% purity). The reaction mixture was stirred at 25 °C for 15 min followed by the addition of 1,2-dibromoethane (1.91 g, 10.2 mmol). The reaction mixture was stirred at 25 °C for a further 15 min. The reaction mixture was diluted with water (40 mL) and extracted with EtOAc (3 × 60mL). The combined organics were washed with brine (50 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography.1H NMR (400 MHz, CDCl3) δ 8.14 (d, J = 8.0 Hz, 1H), 7.55 (d, J = 8.0 Hz, 1H), 1.85-1.82 (m, 2H), 1.74-1.69 (m, 2H).
[0237] Methyl 2-(1-cyanocyclopropyl)-6-(trifluoromethyl)nicotinate: To a solution of 1-(3-bromo-6- (trifluoromethyl)pyridin-2-yl)cyclopropanecarbonitrile (900 mg, 3.09 mmol) in MeOH (30 mL) were added Pd(dppf)Cl2 (113 mg, 0.15 mmol) and DIPEA (1.20 g, 9.28 mmol). The reaction mixture was stirred at 80 °C for 12 h under an atmosphere of CO (50 psi). The reaction mixture was diluted with water (120 mL) and extracted with EtOAc (3 × 80 mL). The combined organic layers were washed with brine (150 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography.1H NMR (400 MHz, CDCl3) δ 8.33 (d, J = 8.0 Hz, 1H), 7.70 (d, J = 8.0 Hz, 1H), 4.06 (s, 3H), 1.94-1.87 (m, 2H), 1.82-1.76 (m, 2H).
[0238] 2-(trifluoromethyl)spiro[6,7-dihydro-1,6-naphthyridine-8,1'-cyclopropane]-5-one: To a solution of methyl 2-(1-cyanocyclopropyl)-6-(trifluoromethyl)nicotinate (600 mg, 2.22 mmol) in MeOH (12 mL) at 0 °C were added dichlorocobalt (577 mg, 4.44 mmol) and NaBH4 (504 mg, 13.3 mmol). The reaction mixture was stirred at 25 °C for 1 h. The reaction mixture was cooled to 0 °C, diluted with sat. aq. NH4Cl (40 mL), and extracted with EtOAc (3 × 30 mL). The combined organics were washed with brine (50 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by preparatory TLC.1H NMR (400 MHz, CDCl3) δ 8.49 (d, J = 8.0 Hz, 1H), 7.60 (d, J = 8.0 Hz, 1H), 6.66 (br s, 1H), 3.56 (d, J = 4.0 Hz, 2H), 1.60-1.55 (m, 2H), 1.08-1.02 (m, 2H).
[0239] Methyl 2-[5-oxo-2-(trifluoromethyl)spiro[7H-1,6-naphthyridine-8,1'-cyclopropane]-6- yl]acetate: To a solution of 2-(trifluoromethyl)spiro[6,7-dihydro-1,6-naphthyridine-8,1'-cyclopropane]-5- one (240 mg, 0.99 mmol) in DMF (3.0 mL) were added methyl 2-bromoacetate (136 mg, 0.89 mmol) and Cs2CO3 (646 mg, 1.98 mmol). The reaction mixture was stirred at 40 °C for 2 h. The reaction mixture was diluted with water (10 mL) and extracted with EtOAc (3 × 8 mL). The combined organics were washed with brine (15 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by preparatory TLC.1H NMR (400 MHz, CDCl3) δ 8.50 (d, J = 8.0 Hz, 1H), 7.59 (d, J = 8.0 Hz, 1H), 4.36 (s, 2H), 3.78 (s, 3H), 3.62 (s, 2H), 1.62-1.58 (m, 2H), 1.10-1.05 (m, 2H).Intermediate 9 Methyl 2-[6-(difluoromethoxy)-1-oxospiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl]acetate
[0240] methyl 2-[1-oxo-6-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)spiro[3H-isoquinoline-4,1'- cyclopropane]-2-yl]acetate: To a solution of methyl 2-(6-bromo-1-oxo-spiro[3H-isoquinoline-4,1'- cyclopropane]-2-yl)acetate (0.50 g, 1.54 mmol) and 4,4,4',4',5,5,5',5'-octamethyl-2,2'-bi(1,3,2- dioxaborolane) (588 mg, 2.31 mmol) in 1,4-dioxane (10 mL) were added KOAc (454 mg, 4.63 mmol) and Pd(dppf)Cl2(12 mg, 0.02 mmol). The reaction mixture was stirred at 80 °C for 5 h. The reaction mixture was filtered and the filtrate was concentrated under reduced pressure. The residue was purified by silica gel column chromatography. LCMS: m / z = 372.2 [M+H]+.
[0241] Methyl 2-(6-hydroxy-1-oxospiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)acetate: To a solution of methyl 2-[1-oxo-6-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)spiro[3H-isoquinoline-4,1'- cyclopropane]-2-yl]acetate (670 mg, 1.80 mmol) in 1,4-dioxane (6 mL) and H2O (6 mL) at 0 °C was added Oxone (1.22 g, 1.99 mmol). The reaction mixture was stirred at 20 °C for 4 h. The reaction mixture was diluted with sat. aq. Na2S2O3 (10 mL) and extracted with EtOAc (3 × 10 mL). The combined organics were washed with brine (10 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure to give a residue that was used directly. LCMS: m / z = 262.3 [M+H]+.
[0242] Methyl 2-[6-(difluoromethoxy)-1-oxospiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl]acetate: To a solution of methyl 2-(6-hydroxy-1-oxospiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)acetate (390 mg, 1.49 mmol) and sodium 2-chloro-2,2-difluoroacetate (273 mg, 1.79 mmol) in DMF (5 mL) was added K2CO3 (413 mg, 2.99 mmol). The reaction mixture was stirred at 110 °C for 16 h. The reaction mixture was cooled to ambient temperature, diluted with water (5 mL), and extracted with EtOAc (3 × 5 mL). The combined organics were washed with brine (5 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography. LCMS: m / z = 312.1 [M+H]+. Intermediate 10 Methyl 2-(6-cyclopropyl-1-oxospiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)acetate
[0243] To a solution of methyl 2-(6-bromo-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)acetate (200 mg, 0.62 mmol) in 1,4-dioxane (3.0 mL) were added cyclopropylboronic acid (159 mg, 1.85 mmol), CsF (282 mg, 1.85 mmol), and Pd(dppf)Cl2 (45 mg, 0.06 mmol). The reaction mixture was stirred at 100 °C for 6 h. The reaction mixture was diluted with water (10 mL) and extracted with EtOAc (3 × 3 mL). The combined organic layers were washed with brine (10 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography. LCMS: m / z = 286.2 [M+H]+. Intermediate 11 Methyl 2-[5-fluoro-1-oxo-6-(trifluoromethyl)spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl]acetate
[0244] 2,3-difluoro-4-(trifluoromethyl)benzoic acid: To a solution of 1,2-difluoro-3- (trifluoromethyl)benzene (3.60 g, 19.8 mmol) in THF (240 mL) at -70 °C was added LDA (11.86 mL, 2 M in 12:25 THF:n-hexane). The reaction mixture was stirred at -70 °C for 2 h. Into the reaction mixture was added dry ice pellets (5 g) and the reaction mixture was stirred at -70 °C for a further 2 h. The reaction mixture was diluted with water (100 mL) and extracted with EtOAc (3 × 100 mL). The combined organics were dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure to provide a residue that was used directly.1H NMR (400 MHz, CDCl3): δ 9.03 (br s, 1H), 7.78 (t, J = 6.8 Hz, 1H), 7.41 (t, J = 6.8 Hz, 1H).
[0245] 2-(1-cyanocyclopropyl)-3-fluoro-4-(trifluoromethyl)benzoic acid: To a solution of 2,3- difluoro-4-(trifluoromethyl)benzoic acid (4.70 g, 20.8 mmol) and cyclopropanecarbonitrile (1.39 g, 20.8 mmol) in THF (100 mL) at -40 °C was added dropwise KHMDS (54.1 mL, 1 M in THF). The reaction mixture was stirred at -40 °C for 3 h. The reaction mixture was diluted with water (100 mL) and extracted with EtOAc (3 × 50 mL). The organics were discarded and the aqueous layer was adjusted pH = 3-4 with aqueous HCl (2 N). The aqueous was extracted with EtOAc (3 × 50 mL). The combined organics were dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure to provide a residue that was used directly.1H NMR (400 MHz, CDCl3): δ 9.34 (br s, 1H), 7.87-7.94 (m, 1H), 7.79- 7.73 (m, 1H), 1.88-1.97 (m, 2H), 1.31-1.37 (m, 2H).
[0246] Methyl 2-(1-cyanocyclopropyl)-3-fluoro-4-(trifluoromethyl)benzoate: To a solution of 2-(1- cyanocyclopropyl)-3-fluoro-4-(trifluoromethyl)benzoic acid (4.50 g, 16.5 mmol) in DMF (50 mL) were added K2CO3(3.41 g, 24.7 mmol) and CH3I (2.57 g, 18.1 mmol). The reaction mixture was stirred at 20 °C for 2 h. The reaction mixture was diluted with EtOAc (100 mL) and washed with H2O (50 mL) andbrine (50 mL). The organic layer was dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography.1H NMR (400 MHz, CDCl3): δ 7.78-7.67 (m, 2H), 4.04 (s, 3H), 1.81-1.89 (m, 2H), 1.22-1.30 (m, 2H).
[0247] 5-fluoro-6-(trifluoromethyl)spiro[2,3-dihydroisoquinoline-4,1'-cyclopropane]-1-one: To a mixture of methyl 2-(1-cyanocyclopropyl)-3-fluoro-4-(trifluoromethyl)benzoate (0.50 g, 1.74 mmol) and dichlorocobalt (226 mg, 1.74 mmol) in MeOH (10 mL) at 0 °C was added NaBH4 (132 mg, 3.48 mmol). The reaction mixture was stirred at 20 °C for 2 h. The reaction mixture was cooled to 0 °C, diluted with sat. aq. NH4Cl (10 mL) and extracted with EtOAc (3 × 10 mL). The combined organics were washed with brine (50 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure to provide a residue that was used directly. LCMS: m / z = 260.1 [M+H]+.
[0248] Methyl 2-[5-fluoro-1-oxo-6-(trifluoromethyl)spiro[3H-isoquinoline-4,1'-cyclopropane]-2- yl]acetate: To a solution of 5-fluoro-6-(trifluoromethyl)spiro[2,3-dihydroisoquinoline-4,1'- cyclopropane]-1-one (0.29 g, 1.12 mmol) in DMF (5 mL) at 0 °C was added NaH (49 mg, 1.23 mmol, 60% purity). The reaction mixture was stirred at 0 °C for 0.5 h followed by the addition of methyl 2- bromoacetate (257 mg, 1.68 mmol). The reaction mixture was stirred at 20 °C for a further 2 h. The reaction mixture was diluted with water (5 mL) and extracted with EtOAc (3 x 5 mL). The combined organic layers were dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography.1H NMR (400 MHz, CDCl3): δ 8.05 (d, J = 8.0 Hz, 1H), 7.54 (d, J = 8.0 Hz, 1H), 4.34 (s, 2H), 3.78 (s, 3H), 3.40 (s, 2H), 1.63-1.70 (m, 2H), 1.02- 1.09 (m, 2H). Intermediate 12 2-(6-bromo-4,4-dimethyl-1-oxo-3H-isoquinolin-2-yl)acetic acid
[0249] Methyl 2-(6-bromo-4,4-dimethyl-1-oxo-3H-isoquinolin-2-yl)acetate: To a mixture of 6- bromo-4,4-dimethyl-2,3-dihydroisoquinolin-1-one (182 mg, 0.72 mmol) and Cs2CO3 (352 mg, 1.07 mmol) in MeCN (2.9 mL) were added methyl bromoacetate (131 mg, 0.86 mmol) and tetrabutylammonium iodide (26 mg, 0.07 mmol). The reaction mixture was stirred at 80 ºC for 16 h. The reaction mixture was cooled to ambient temperature and diluted with EtOAc (15 mL). The resulting mixture was filtered through a pad of silica and the filtrate was concentrated under reduced pressure. The residue was purified by silica gel column chromatography. LCMS: m / z = 326.2, 328.2 [M+H]+.
[0250] 2-(6-bromo-4,4-dimethyl-1-oxo-3H-isoquinolin-2-yl)acetic acid: To a solution of methyl 2-(6- bromo-4,4-dimethyl-1-oxo-3H-isoquinolin-2-yl)acetate (234 mg, 0.72 mmol) in THF (15 mL) was added LiOH (0.72 mL, 2 M in water). The reaction mixture was stirred at 23 °C for 3 h. The reaction mixture was adjusted pH = 3-4 using aqueous HCl (1 N) and extracted with EtOAc (3 x 10 mL). The combinedorganics were washed with brine, dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure to provide a residue that was used directly. LCMS: m / z = 312.1, 314.1 [M+H]+. Intermediate 13 2-(6-bromo-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopentane]-2-yl)acetic acid
[0251] 6-bromospiro[2,3-dihydroisoquinoline-4,1'-cyclopentane]-1-one: To a solution of [1-(3- bromophenyl)cyclopentyl]methanamine (300 mg, 1.18 mmol) in DCM (2.5 mL) were added a solution of triphosgene (140 mg, 0.47 mmol) in DCM (4 mL) followed by Et3N (237 mg, 2.36 mmol). The reaction mixture was stirred for 2 h at 23 °C. The reaction mixture was filtered through celite and the filtrate was added dropwise to a solution of aluminum chloride (644 mg, 4.72 mmol) in DCM (6 mL) at 0 °C. This mixture was stirred at 0 °C for 45 min. The reaction mixture was diluted with aqueous HCl (30 mL, 0.1 N) and extracted with DCM (3 x 20 mL). The combined organics were washed with brine (3 x 20 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The crude residue was purified by reverse-phase HPLC. LCMS: m / z = 280.0, 282.0 [M+H]+.
[0252] Ethyl 2-(6-bromo-1-oxospiro[3H-isoquinoline-4,1'-cyclopentane]-2-yl)acetate: To a solution of 6-bromospiro[2,3-dihydroisoquinoline-4,1'-cyclopentane]-1-one (59 mg, 0.21 mmol) in MeCN (1.5 mL) was added Cs2CO3(138 mg, 0.42 mmol). The reaction mixture was stirred at 23 °C for 15 min followed by the addition of ethyl 2-iodoacetate (68 mg, 0.32 mmol). The reaction mixture was stirred at 55 °C for a further 2 h. The reaction mixture was cooled to 23 °C, diluted with aqueous HCl (20 mL, 0.1 N), and extracted with EtOAc (4 x 20 mL). The combined organics were dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure to provide a residue that was used directly. LCMS: m / z = 366.4, 368.3 [M+H]+.
[0253] 2-(6-bromo-1-oxospiro[3H-isoquinoline-4,1'-cyclopentane]-2-yl)acetic acid: To a solution of ethyl 2-(6-bromo-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopentane]-2-yl)acetate (88 mg, 0.24 mmol) in THF (1.5 mL) was added a solution of LiOH (12 mg, 0.48 mmol) in water (0.12 mL). The reaction mixture was stirred for 3 h at 23 °C. The reaction mixture was adjusted pH = 3-4 using aqueous HCl (1 N) and extracted with EtOAc (3 x 15 mL). The combined organic layers were washed with brine (20 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure to provide a residue that was used directly. LCMS: m / z = 338.2, 340.2 [M+H]+.Intermediate 14 2-(6-bromo-4-methyl-1-oxo-3,4-dihydroisoquinolin-2-yl)acetic acid
[0254] 6-bromo-4-methyl-3,4-dihydro-2H-isoquinolin-1-one: To a solution triphosgene (140 mg, 0.47 mmol) in DCM (4 mL) was added 2-(3-bromophenyl)propan-1-amine (250 mg, 1.17 mmol) as a solution in DCM (2.5 mL) followed by Et3N (237 mg, 2.36 mmol). The reaction mixture was stirred for 2 h at 23 °C and then filtered through celite. The resulting filtrate was added dropwise to a solution of AlCl3(637 mg, 4.67 mmol) in DCM (6 mL) at 0 °C. The resultant mixture was stirred at 0 °C for 1 h. The reaction mixture was diluted with aqueous HCl (30 mL, 0.1 N) and extracted with DCM (3 x 20 mL). The combined organics were washed with brine (3 x 20 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The crude residue was purified by reverse-phase HPLC. LCMS: m / z = 240.1, 242.0 [M+H]+.
[0255] ethyl 2-(6-bromo-4-methyl-1-oxo-3,4-dihydroisoquinolin-2-yl)acetate : To a solution of 6- bromo-4-methyl-3,4-dihydro-2H-isoquinolin-1-one (40 mg, 0.17 mmol) in MeCN (1.1 mL) was added Cs2CO3(1.31 g, 0.33 mmol). The reaction mixture was stirred at 23 °C for 15 min followed by the addition of ethyl 2-iodoacetate (54 mg, 0.25 mmol). The reaction mixture was heated at 55 °C for a further 2 h. The reaction mixture was cooled to 23 °C, diluted with aqueous HCl (20 mL, 0.1 N), and extracted with EtOAc (4 x 20 mL). The combined organics were dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure to provide a residue that was used directly. LCMS: m / z = 326.2, 328.2 [M+H]+.
[0256] 2-(6-bromo-4-methyl-1-oxo-3,4-dihydroisoquinolin-2-yl)acetic acid: To a solution of ethyl 2- (6-bromo-4-methyl-1-oxo-3,4-dihydroisoquinolin-2-yl)acetate (64 mg, 0.20 mmol) in THF (1.1 mL) was added a solution of LiOH (10 mg, 0.39 mmol) in water (0.10 mL). The reaction mixture was stirred for 3 h at 23 °C. The reaction mixture was adjusted pH = 3-4 using aqueous HCl (1 N) and extracted with EtOAc (3 x 15 mL). The combined organics were washed with brine (20 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure to provide a residue that was used directly. LCMS: m / z = 298.1, 300.1 [M+H]+.Intermediate 15 Methyl 2-(6-bromo-5-fluoro-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)acetate and methyl 2-(5-fluoro-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)acetate
[0257] 4-bromo-2-(1-cyanocyclopropyl)-3-fluorobenzoic acid: To a solution of 4-bromo-2,3- difluorobenzoic acid (4.50 g, 19.0 mmol) and cyclopropanecarbonitrile (3.80 g, 57.0 mmol) in THF (6.0 mL) at -40 °C was added KHMDS (49.4 mL, 1 M in THF). The reaction mixture was stirred at 20 °C for 1 h. The reaction mixture was diluted with water (10 mL) and extracted with EtOAc (3 × 10 mL). The aqueous was adjusted pH = 3-4 using aqueous HCl (3.0 N) and then extracted with EtOAc (3 × 10 mL). The combined organics were washed with brine (20 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure to give a residue that was used directly.1H NMR (400 MHz, CD3OD): δ 7.79-7.74 (m, 1H), 7.64-7.60 (m, 1H), 1.81-1.76 (m, 2H), 1.33-1.29 (m, 2H).
[0258] Methyl 4-bromo-2-(1-cyanocyclopropyl)-3-fluorobenzoate: To a solution of 4-bromo-2-(1- cyanocyclopropyl)-3-fluorobenzoic acid (4.80 g, 16.9 mmol) in THF (50 mL) at 0 °C was added TMSCHN2 (16.9 mL, 2 M in n-hexane). The reaction mixture was stirred at 20 °C for 16 h. The reaction mixture was diluted with glacial acetic acid (20 mL) stirred at 20 °C for a further 30 min. The reaction mixture was diluted with water (20 mL) and extracted with EtOAc (3 × 10 mL). The combined organics were washed with brine (15 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography.1H NMR (400 MHz, CD3OD): δ 7.82-7.76 (m, 1H), 7.63-7.57 (m, 1H), 3.98 (s, 3H), 1.81-1.75 (m, 2H), 1.31-1.25 (m, 2H).
[0259] 6-bromo-5-fluoro-spiro[2,3-dihydroisoquinoline-4,1'-cyclopropane]-1-one and 5-fluoro- spiro[2,3-dihydroisoquinoline-4,1'-cyclopropane]-1-one: To a solution of methyl 4-bromo-2-(1- cyanocyclopropyl)-3-fluorobenzoate (1.8 g, 6.04 mmol) and dichlorocobalt (1.57 g, 12.1 mmol) in MeOH (3.0 mL) at 0 °C was added NaBH4 (1.15 g, 30.4 mmol). The reaction mixture was stirred at 20 °C for 16 h. The reaction mixture was diluted with sat. aq. NH4Cl (10 mL) and water (5 mL) and extracted with EtOAc (3 × 8 mL). The combined organics were washed with brine, dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure to give a residue as a 3:1 mixture in favor of 5- fluoro-spiro[2,3-dihydroisoquinoline-4,1'-cyclopropane]-1-one that was used directly: 6-bromo-5-fluoro- spiro[2,3-dihydroisoquinoline-4,1'-cyclopropane]-1-one. LCMS: m / z = 270.0, 272.0 [M+H]+; 5-fluoro- spiro[2,3-dihydroisoquinoline-4,1'-cyclopropane]-1-one: LCMS: m / z = 192.1 [M+H]+.
[0260] Methyl 2-(6-bromo-5-fluoro-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)acetate and methyl 2-(5-fluoro-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)acetate: To a mixture of 6-bromo-5-fluoro-spiro[2,3-dihydroisoquinoline-4,1'-cyclopropane]-1-one and 5-fluoro-spiro[2,3- dihydroisoquinoline-4,1'-cyclopropane]-1-one (500 mg, 1.85 mmol, 1:3 ratio) in DMF (3.0 mL) at 0 °C was added NaH (74 mg, 1.85 mmol, 60% purity). The reaction mixture was stirred at 0 °C for 30 min followed by the addition of methyl 2-bromoacetate (425 mg, 2.78 mmol). The reaction mixture was stirred at 20 °C for a further 1.5 h. The reaction mixture was diluted with water (5 mL) and then extracted with EtOAc (3 × 5 mL). The combined organics were washed with brine (5 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography to provide a 3:1 mixture of the title compounds in favor of methyl 2-(5-fluoro-1-oxo- spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)acetate:
[0261] methyl 2-(6-bromo-5-fluoro-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)acetate: LCMS: m / z = 342.0, 344.0 [M+H]+; methyl 2-(5-fluoro-1-oxo-spiro[3H-isoquinoline-4,1'- cyclopropane]-2-yl)acetate: LCMS: m / z = 264.1 [M+H]+Intermediate 16 methyl 2-(6-cyano-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)acetate
[0262] To a solution of methyl 2-(6-bromo-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)acetate (100 mg, 0.31 mmol) in DMF (3.1 mL) were added zinc cyanide (54 mg, 0.46 mmol) and Pd(PPh3)4 (71 mg, 0.2 mmol). The suspension was sparged with N2 and stirred at 100 ºC for 3 h. The reaction mixture was cooled to ambient temperature, diluted with water (10 mL), and extracted with EtOAc (3 × 10 mL). The combined organic layers were washed with brine, dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography. LCMS: m / z = 271.2 [M+H]+.1H NMR (400 MHz, CDCl3): δ 8.19 (dd, J = 8.0, 0.5 Hz, 1H), 7.57 (dd, J = 8.0, 1.5 Hz, 1H), 7.14 (dd, J = 1.5, 0.4 Hz, 1H), 4.34 (s, 2H), 3.75 (s, 3H), 3.48 (s, 2H), 1.16-1.09 (m, 4H). Intermediate 17 2-(6-fluoro-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)acetic acid
[0263] 6-fluorospiro[2,3-dihydroisoquinoline-4,1'-cyclopropane]-1-one: To a solution of [1-(3- fluorophenyl)cyclopropyl]methanamine (300 mg, 1.82 mmol) in DCM (3 mL) was added a solution of triphosgene (215 mg, 0.73 mmol) in DCM (3 mL) followed by Et3N (367 mg, 3.63 mmol). The reactionmixture was stirred for 2 h at 23 °C. The reaction mixture was filtered through celite, and the filtrate was added dropwise to a solution of aluminum chloride (990 mg, 7.26 mmol) in DCM (6 mL) at 0 °C. This mixture was stirred at 0 °C for 60 min. The reaction mixture was diluted with aqueous HCl (50 mL, 0.1 N) and extracted with DCM (3 x 20 mL). The combined organics were washed with brine (3 x 20 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The crude residue was purified by reverse-phase preparative HPLC. LCMS: m / z = 192.1 [M+H]+.
[0264] Ethyl 2-(6-fluoro-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)acetate: To a solution of 6-fluorospiro[2,3-dihydroisoquinoline-4,1'-cyclopropane]-1-one (32 mg, 0.17 mmol) in MeCN (1.2 mL) was added Cs2CO3 (110 mg, 0.33 mmol). The reaction mixture was stirred at 23 °C for 15 min followed by the addition of ethyl 2-iodoacetate (54 mg, 0.25 mmol). The reaction mixture was stirred at 55 °C for 24 h. The reaction mixture was cooled to 23 °C, diluted with aq. HCl (15 mL, 0.1 N), and extracted with EtOAc (4 x 15 mL). The combined organics were dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure to provide a residue that was used directly. LCMS: m / z = 278.1 [M+H]+.
[0265] 2-(6-fluoro-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)acetic acid: To a solution of ethyl 2-(6-fluoro-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)acetate (45 mg, 0.16 mmol) in THF (1.0 mL) was added a solution of LiOH (12 mg, 0.48 mmol) in water (0.12 mL). The reaction mixture was stirred for 3 h at 23 °C. The reaction mixture was adjusted to pH = 3-4 using aq. HCl (1 N) and extracted with EtOAc (3 x 20 mL). The combined organic layers were washed with brine (20 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure to provide a residue that was used directly. LCMS: m / z = 250.1 [M+H]+. Intermediate 18
[0266] 5-fluoro-4-methylpyrimidin-2-amine: To a solution of 2-chloro-5-fluoro-4-methylpyrimidine (300 mg, 2.05 mmol) in i-PrOH (1 mL) was added NH3•H2O (0.63 mL) at 25 °C. Then the mixture was stirred at 100 °C for 1.5 h. The reaction mixture was filtered and the filter cake was concentrated under reduced pressure.1H NMR (400 MHz, DMSO-d6): δ 8.11 (d, J = 1.6 Hz, 1H), 6.48 (br s, 2H), 2.23 (d, J = 2.4 Hz, 3H). Intermediate 19
[0267] 3-fluoro-5-(1H-pyrazol-1-yl)pyridin-2-amine: To a solution of 5-bromo-3-fluoro-pyridin-2- amine (500 mg, 2.62 mmol) and 1H-pyrazole (149 mg, 2.18 mmol) in DMF (5 mL) was added (1R,2R)-N1,N2-dimethylcyclohexane-1,2-diamine (62.1 mg, 0.44 mmol), CuI (41.6 mg, 0.22 mmol) and K2CO3(452 mg, 3.27 mmol) under N2. The reaction mixture was stirred at 120 °C for 12 h. The reaction mixture was quenched by addition of H2O (30 mL) and extracted with EtOAc (5 × 30 mL). The combined organics were washed with brine (30 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography.1H NMR (400 MHz, CDCl3): δ 8.19 (d, J = 2.0 Hz, 1H), 7.80 (d, J = 2.4 Hz, 1H), 7.71-7.67 (m, 2H), 6.47 (s, 1H), 4.73 (br s, 2H). Intermediate 20
[0268] (Z)-3-(dimethylamino)-1-(2-methylthiazol-4-yl)prop-2-en-1-one: A solution of 1-(2- methylthiazol-4-yl)ethanone (3.0 g, 21.3 mmol) in N,N-Dimethylformamide dimethyl acetal (10 mL) was heated at 90 °C in a sealed tube for 16 h. The reaction mixture was cooled to 15 °C, filtered, and the filter cake was dried under reduced pressure to provide a solid that was used directly. LCMS: m / z = 197.1 [M+H]+.
[0269] 4-(2-methylthiazol-4-yl)pyrimidin-2-amine: To a solution of (Z)-3-(dimethylamino)-1-(2- methylthiazol-4-yl)prop-2-en-1-one (1.0 g, 5.10 mmol) and guanidine hydrochloride (487 mg, 5.10 mmol) in EtOH (20 mL) was added NaOH (245 mg, 6.11 mmol). The reaction mixture was stirred at 80 °C for 32 h. The reaction mixture was concentrated under reduced pressure, and the resulting residue was suspended in H2O (10 mL). This solution was filtered and the filter cake was dried under reduced pressure to provide a solid that was used directly. LCMS: m / z = 193.1 [M+H]+. Intermediate 21
[0270] Ethyl 2-imino-2-((2-oxopyrrolidin-1-yl)amino)acetate: To a solution of 1-aminopyrrolidin-2- one HCl salt (10 g, 73.2 mmol) and ethyl 2-ethoxy-2-imino-acetate (15.9 g, 110 mmol) in EtOH (120 mL) was added Et3N (7.41 g, 73.2 mmol). The reaction mixture was stirred at 60 °C for 5 h. The reaction mixture was concentrated under reduced pressure to give a residue that was used directly. LCMS: m / z = 200.1 [M+H]+.
[0271] Ethyl 6,7-dihydro-5H-pyrrolo[1,2-b][1,2,4]triazole-2-carboxylate: A solution of ethyl 2- imino-2-((2-oxopyrrolidin-1-yl)amino)acetate (15.0 g, 75.3 mmol) in POCl3(173 g, 1.13 mol) was stirred at 120 °C for 3 h. The reaction mixture was concentrated under reduced pressure, and the resulting solution was added dropwise to sat. aq. NaHCO3(240 mL) and extracted with EtOAc (3 × 80 mL). Thecombined organics were washed with brine (80 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography. LCMS: m / z = 182.1 [M+H]+.
[0272] 6,7-dihydro-5H-pyrrolo[1,2-b][1,2,4]triazole-2-carboxylic acid: To a solution of ethyl 6,7- dihydro-5H-pyrrolo[1,2-b][1,2,4]triazole-2-carboxylate (3.0 g, 16.6 mmol) in 1,4-dioxane (15 mL) was added aq. HCl (30.4 mL, 3 M). The reaction mixture was stirred at 100 °C for 16 h. The reaction mixture was concentrated under reduced pressure, and the resulting residue was slurried with MTBE:DCM (3:1, 20 mL) at 25oC to give a solid that was filtered and used directly. LCMS: m / z = 154.1 [M+H]+.
[0273] tert-butyl N-(6,7-dihydro-5H-pyrrolo[1,2-b][1,2,4]triazol-2-yl)carbamate: To a solution of 6,7-dihydro-5H-pyrrolo[1,2-b][1,2,4]triazole-2-carboxylic acid (2.6 g, 16.9 mmol) in toluene (26 mL) was added Et3N (2.6 g, 25.5 mmol) and DPPA (5.6 g, 20.4 mmol). The reaction mixture was stirred at 25 °C for 16 h, followed by addition of t-BuOH (20.1 g, 272 mmol). The reaction mixture was stirred at 80 °C for an additional 4 h. The reaction mixture was cooled to ambient temperature, quenched with water (120 mL), and extracted with EtOAc (3 × 40 mL). The combined organics were washed with brine (40 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography. The resulting residue was slurried with MTBE (30 mL) and the filter cake was collected and dried under reduced pressure. LCMS: m / z = 225.1 [M+H]+.
[0274] 6,7-dihydro-5H-pyrrolo[1,2-b][1,2,4]triazol-2-amine: A solution of tert-butyl N-(6,7-dihydro- 5H-pyrrolo[1,2-b][1,2,4]triazol-2-yl)carbamate (500 mg, 2.23 mmol) in HCl (10 mL, 4 M in EtOAc) was stirred at 20 °C for 4 h. The reaction mixture was concentrated under reduced pressure to give a solid that was used directly.1H NMR (400 MHz, DMSO-d6) δ 4.05 (t, J = 7.2 Hz, 2H), 3.02 (t, J = 7.2 Hz, 2H), 2.60 (m, 2H). Intermediate 22
[0275] 5-chloro-1-methyl-1H-pyrazolo[4,3-b]pyridine: To a solution of 5-chloro-1H-pyrazolo[4,3- b]pyridine (2.0 g, 13.0 mmol) in acetone (20 mL) at 0 °C was added KOH (2.19 g, 39.1 mmol). The reaction mixture was stirred for 1 h at 0 °C followed by the addition of MeI (1.22 mL, 19.5 mmol). The reaction mixture was stirred at 25 °C for another 12 h. The reaction mixture was poured into H2O (40 mL) and extracted with EtOAc (3 × 40 mL). The combined organic layers were washed with brine (40 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography.Intermediate 23
[0276] 1-methyl-1H-pyrazolo[4,3-b]pyridin-5-amine: To a solution of 5-chloro-1-methyl-1H- pyrazolo[4,3-b]pyridine (1.0 g, 5.97 mmol) in THF (10 mL) was added diphenylmethanimine (1.30 g, 7.16 mmol), Pd2(dba)3(1.09 g, 1.19 mmol), X-phos (1.14 g, 2.39 mmol) and LiHMDS (1 M in THF, 7.16 mL). The reaction mixture was stirred at 65 °C for 10 h. To the reaction mixture was added 2N HCl (30 mL) and THF (10 mL), and the reaction mixture was stirred at 25 °C for 30 min. The reaction mixture was adjusted to pH = 9 by the addition of solid Na2CO3. The reaction mixture was poured into H2O (20 mL) and extracted with EtOAc (3 × 20 mL). The combined organics were washed with brine (20 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography. LCMS: m / z = 149.1 [M+H]+. Intermediate 24
[0277] 2-methyl-2H-pyrazolo[4,3-b]pyridin-5-amine: To a solution of 5-chloro-2-methyl-2H- pyrazolo[4,3-b]pyridine (1.0 g, 5.97 mmol) and diphenylmethanimine (1.3 g, 7.16 mmol) in THF (10 mL) at 0 °C was added X-Phos (1.1 g, 2.39 mmol), Pd2(dba)3(1.1 g, 1.19 mmol) and LiHMDS (1 M in THF, 7.16 mL). The reaction mixture was stirred at 65 °C for 10 h. To the reaction mixture was added aq. HCl (30 mL, 2 N) and THF (10 mL), and the reaction mixture was stirred at 25 °C for 30 min. The reaction mixture was adjusted to pH = 9 by the addition of solid Na2CO3.The reaction mixture was diluted with water (20 mL) and extracted with EtOAc (3 × 20 mL). The combined organics were washed with brine (20 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography.1H NMR (400 MHz, DMSO-d6) δ 7.84 (d, J = 1.2 Hz, 1H), 7.67-7.65 (m, 1H), 6.58-6.55 (m, 1H), 5.91 (br s, 2H), 4.01 (d, J = 2.0 Hz, 3H). Intermediate 25
[0278] Methyl 2-(1-((tert-butoxycarbonyl)amino)cyclopropyl)acetate: To a solution of 2-(1-((tert- butoxycarbonyl)amino)cyclopropyl)acetic acid (300 mg, 1.39 mmol) in THF (3 mL) and MeOH (1 mL) was added TMSCHN2(2 M in hexanes, 1.39 mL) at 0 °C, the mixture was stirred at 25 °C for 2 h. The mixture was quenched by addition of Na2S2O3(10 mL) and extracted with EtOAc (3 × 6 mL). Thecombined organic layers were washed with brine (10 mL), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to give a residue. The mixture was purified by preparatory TLC.
[0279] tert-butyl (1-(2-hydroxy-2-methylpropyl)cyclopropyl)carbamate: To a solution of methyl 2- (1-((tert-butoxycarbonyl)amino)cyclopropyl)acetate (100 mg, 0.44 mmol) in THF (2 mL) was added MeMgBr (3 M in ether, 0.58 mL) at -78 °C, and then the mixture was stirred at 25 °C for 1 h. The mixture was poured into ice water (10 mL) and extracted with EtOAc (3 × 8 mL). The combined organic layers were washed with brine (15 mL), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to provide a residue that was used directly.
[0280] 1-(1-aminocyclopropyl)-2-methylpropan-2-ol: A solution of tert-butyl (1-(2-hydroxy-2- methylpropyl)cyclopropyl)carbamate (40 mg, 0.17 mmol) in 4 M HCl / MeOH (0.5 mL) was stirred at 25 °C for 0.5 h. The mixture was concentrated under reduced pressure. Crude material was used in the next step without purification. Intermediate 26
[0281] 4-bromo-2-(1-cyanocyclopropyl)-3-fluorobenzoic acid: To a solution of 4-bromo-2,3- difluorobenzoic acid (40 g, 169 mmol) in THF (700 mL) was added cyclopropanecarbonitrile (34 g, 506 mmol). To the reaction mixture was cooled to -40oC followed by the addition of KHMDS (438.8 mL, 1M in THF). The reaction mixture was stirred at 20oC for 1 h, diluted with water (500 mL), and extracted with EtOAc (2 × 100 mL). The aqueous phase was adjusted to pH = 3 with aq. HCl (3 N) and extracted with EtOAc (3 × 200 mL). The combined organics were dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure to provide a solid that was used directly. LCMS: m / z = 284.0, 285.9 [M+H]+.
[0282] Methyl 4-bromo-2-(1-cyanocyclopropyl)-3-fluorobenzoate: To a solution of 4-bromo-2-(1- cyanocyclopropyl)-3-fluorobenzoic acid (46 g, 162 mmol) in DMF (500 mL) at 0 °C was added K2CO3 (34 g, 243 mmol). To the mixture was added MeI (23 g, 162 mmol). The reaction mixture was stirred at 20 °C for 2 h. The reaction mixture was poured into ice cold water (500 mL), filtered, and the filter cake was washed with petroleum ether (2 × 100 mL). The filtrate was concentrated under reduced pressure to provide a solid that was used directly. LCMS: m / z = 298.1, 300.0 [M+H]+.
[0283] 6-bromo-5-fluoro-spiro[2,3-dihydroisoquinoline-4,1'-cyclopropane]-1-one: To a solution of methyl 4-bromo-2-(1-cyanocyclopropyl)-3-fluorobenzoate (42 g, 141 mmol) in MeOH (600 mL) and water (20 mL) at 0 °C was added dichlorocobalt (73 g, 563 mmol) and NaBH4 (27.0 g, 704 mmol). The reaction mixture was stirred at 20 °C for 4 h. The reaction mixture was poured into sat. aq. NH4Cl (600 mL), diluted with water (300 mL), and extracted with EtOAc (3 × 200 mL). The combined organics were dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel chromatography. LCMS: m / z = 270.0, 272.0 [M+H]+.
[0284] Methyl 2-(6-bromo-5-fluoro-1-oxospiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)acetate: To a solution of 6-bromo-5-fluoro-spiro[2,3-dihydroisoquinoline-4,1'-cyclopropane]-1-one (9.3 g, 34.4 mmol) in DMF (100 mL) at 0 °C was added NaH (2.1 g, 51.6 mmol, 60% purity). The reaction mixture was stirred at 0 °C for 0.5 h. To the reaction mixture was added methyl 2-bromoacetate (11 g, 68.9 mmol, 6.50 mL) at 0 °C. The reaction mixture was stirred at 20oC for 16 h. The reaction mixture was quenched by the addition sat. aq. NH4Cl (50 mL) and ice-cold water (300 mL) and extracted with EtOAc (3 × 80 mL). The combined organics were washed with brine (200 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel chromatography, and the resulting product was slurried with MTBE:PE (2:1, 5 mL) at 25 °C to give a solid that was filtered and dried under reduced pressure. LCMS: m / z = 342.0, 344.0 [M+H]+.1H NMR (400 MHz, CDCl3): δ 7.84 (dd, J = 0.8, 8.4 Hz, 1H), 7.52-7.46 (m, 1H), 4.32 (s, 2H), 3.77 (s, 3H), 3.38 (s, 2H), 1.66-1.60 (m, 2H), 1.04-0.99 (m, 2H). Intermediate 27
[0285] ((fluoromethyl)sulfinyl)benzene: To a suspension of SelectFluor (463.5 g, 1.31 mol) in MeCN (1500 mL) at 0 °C was added a solution of methyl(phenyl)sulfane (130.0 g, 1.05 mol) in MeCN (150 mL) over 10 min. Et3N (132.4 g, 1.31 mol) was then added to the mixture at 0 °C. The reaction mixture was allowed to warm to 20 °C and stirred for 16 h. Two batches of the above were run in parallel and combined for workup. The combined batches were diluted with water (1000 mL) and extracted with DCM (3 × 500 mL). The combined organic layers were dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The crude residue was then dissolved in MeOH (2000 mL), diluted with water (200 mL), and cooled to 0 °C. NBS (372.6 g, 2.09 mol) was carefully added and the mixture was stirred for 16 h at 15 °C. The reaction mixture was diluted with 10% Na2SO3 solution (200 mL) followed by sat. aq. NaHCO3 until pH = 7. Methanol was removed under reduced pressure and the remaining aqueous phase was extracted with DCM (3 × 500 mL). The combined organic layers were washed with brine (500 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure
[0286] (fluoromethyl)(phenyl)(2,3,4,5-tetramethylphenyl)sulfonium tetrafluoroborate: To a solution of ((fluoromethyl)sulfinyl)benzene (10.0 g, 63.2 mmol) in diisopropyl ether (100 mL) at -10 °C were added 1,2,3,4-tetramethylbenzene (7.64 g, 56.9 mmol) and Tf2O (17.8 g, 63.2 mmol). The reaction mixture was allowed to warm to 20 °C and stirred for 1 h. The reaction mixture was filtered and the resulting solid was dissolved in DCM (200 mL) and washed with aq. NaBF4(1 M, 6 × 200 mL). The organic phase was dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. Theresidue was triturated with MTBE at 20 °C for 30 min and then filtered to provide the desired product. LCMS: m / z = 275.2 [M+H]+. Intermediate 28
[0287] Diphenyl(2,2,2-trifluoroethyl)sulfonium trifluoromethanesulfonate: A mixture of diphenylsulfane (36.1 g, 193.9 mmol) and 2,2,2-trifluoroethyl trifluoromethanesulfonate (9 g, 38.8 mmol) was stirred at 150 °C for 20 h in a 100 mL sealed tube. The mixture was cooled to 20 °C and added in MTBE (200 mL). The resulting mixture was filtered and the solid was concentrated under reduced pressure.1H NMR (400 MHz, Acetone-d6): δ 8.38-8.36 (m, 4H), 7.96-7.92 (m, 2H), 7.87-7.83 (m, 4H), 5.79-5.72 (m, 2H). Intermediates 29 and 30
[0288] Methyl 4-bromo-2-iodobenzoate: To a solution of 4-bromo-2-iodo-benzoic acid (10.0 g, 30.6 mmol) in MeOH (100 mL) at 0 °C was added conc. H2SO4 (15 g, 153 mmol). The reaction mixture was stirred at 80 °C for 5 h. The reaction mixture was poured into water (300 mL) and extracted with EtOAc (3 × 100 mL). The combined organic layers were washed with sat. aq. NaHCO3 (3 × 50 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure to provide a crude residue that was used directly.1H NMR (400 MHz, CDCl3): δ 8.18 (s, 1H), 7.70 (d, J = 8.4 Hz, 1H), 7.55 (dd, J = 0.8, 8.0 Hz, 1H), 3.93 (s, 3H).
[0289] Methyl 4-bromo-2-vinylbenzoate: To a mixture of methyl 4-bromo-2-iodo-benzoate (6.0 g, 17.6 mmol), potassium vinyltrifluoroborate (2.4 g, 17.6 mmol), and CsF (8.0 g, 52.8 mmol) in 1,4- dioxane (100 mL) was added Pd(dppf)Cl2 (1.3 g, 1.76 mmol). The reaction mixture was stirred at 90 °C for 16 h. The reaction mixture was concentrated under reduced pressure. The residue was purified by silica gel column chromatography.1H NMR (400 MHz, CDCl3): δ 7.77 (d, J = 8.4 Hz, 1H), 7.72 (d, J = 2.0 Hz, 1H), 7.49-7.37 (m, 2H), 5.66 (d, J = 17.2 Hz, 1H), 5.41 (d, J = 10.8 Hz, 1H), 3.90 (s, 3H).
[0290] Methyl 4-bromo-2-(1-cyanovinyl)benzoate: To a mixture of Cu2O (345 mg, 2.41 mmol), 6,6'- dimethyl-2,2'-bipyridine (444 mg, 2.41 mmol), and Selectfluor (6.4 g, 18 mmol) in acetone (20 mL) and water (10 mL) were added methyl 4-bromo-2-vinyl-benzoate (2.9 g, 12 mmol) and TMSCN (2.4 g, 24.1 mmol). The reaction mixture was stirred at 20 °C for 16 h. The reaction mixture was poured into aq. NaHCO3(1 M, 30 mL) and extracted with EtOAc (3 × 30 mL). The combined organic layers werewashed with brine (30 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography.1H NMR (400 MHz, CDCl3): δ 7.89 (d, J = 8.4 Hz, 1H), 7.65 (dd, J = 2.0, 8.4 Hz, 1H), 7.51 (d, J = 1.6 Hz, 1H), 6.24 (s, 1H), 6.01 (s, 1H), 3.96 (s, 3H).
[0291] Methyl 4-bromo-2-((1r,2r)-1-cyano-2-fluorocyclopropyl)benzoate and methyl 4-bromo-2- ((1r,2s)-1-cyano-2-fluorocyclopropyl)benzoate: To a solution of methyl 4-bromo-2-(1- cyanovinyl)benzoate (800 mg, 3.01 mmol) in THF (30 mL) at 0 °C were added (fluoromethyl)(phenyl)(2,3,4,5-tetramethylphenyl)sulfonium tetrafluoroborate (2.3 g, 6.0 mmol) and NaH (1.2 g, 30.1 mmol, 60% purity in mineral oil). The reaction mixture was stirred at 20 °C for 1 h. The reaction mixture was poured into water (50 mL) and extracted with EtOAc (3 × 30 mL). The combined organic layers were washed with brine (10 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography to provide the title products as a 3:2 mixture. LCMS: m / z = 298.0, 300.0 [M+H]+.
[0292] (2's,4r)-6-bromo-2'-fluorospiro[2,3-dihydroisoquinoline-4,1'-cyclopropane]-1-one and (2'r,4r)-6-bromo-2'-fluorospiro[2,3-dihydroisoquinoline-4,1'-cyclopropane]-1-one: To a solution of methyl 4-bromo-2-((1r,2r)-1-cyano-2-fluorocyclopropyl)benzoate and methyl 4-bromo-2-((1r,2s)-1- cyano-2-fluorocyclopropyl)benzoate (0.92 g, 3.09 mmol, 3:2 mixture) and dichlorocobalt (401 mg, 3.09 mmol) in MeOH (10 mL) at 0 °C was added NaBH4 (350 mg, 9.26 mmol). The reaction mixture was stirred at 20 °C for 2 h. The reaction mixture was poured into sat. aq. NH4Cl (20 mL) and extracted with EtOAc (3 × 20 mL). The combined organic layers were washed with brine (2 × 10 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography to provide:
[0293] (2's,4r)-6-bromo-2'-fluorospiro[2,3-dihydroisoquinoline-4,1'-cyclopropane]-1-one (Int.29):1H NMR (400 MHz, CDCl3): δ 8.02 (d, J = 8.4 Hz, 1H), 7.52 (dd, J = 2.0, 8.4 Hz, 1H), 6.85 (d, J = 2.0 Hz, 1H), 6.12 (br s, 1H), 4.70-4.50 (m, 1H), 3.87 (d, J = 12.4 Hz, 1H), 3.51 (dd, J = 4.4, 12.8 Hz, 1H), 1.62-1.54 (m, 1H), 1.42-1.24 (m, 1H).
[0294] (2'r,4r)-6-bromo-2'-fluorospiro[2,3-dihydroisoquinoline-4,1'-cyclopropane]-1-one (Int.30):1H NMR (400 MHz, CDCl3): δ 8.02 (d, J = 8.4 Hz, 1H), 7.55 (dd, J = 2.0, 8.4 Hz, 1H), 7.28 (d, J = 2.0 Hz, 1H), 6.56 (br s, 1H), 4.81-4.59 (m, 1H), 3.78 (dd, J = 7.6, 12.4 Hz, 1H), 2.74 (dd, J = 4.4, 12.8 Hz, 1H), 1.83-1.73 (m, 1H), 1.21-1.15 (m, 1H). Intermediate 31
[0295] Methyl 2-[(2's,4r)-6-bromo-2'-fluoro-1-oxospiro[3H-isoquinoline-4,1'-cyclopropane]-2- yl]acetate: To a solution of (2's,4r)-6-bromo-2'-fluorospiro[2,3-dihydroisoquinoline-4,1'-cyclopropane]- 1-one (200 mg, 0.74 mmol, Int.29) in DMF (2.0 mL) at 0 °C was added NaH (45 mg, 1.11 mmol, 60%purity in mineral oil). The reaction mixture was stirred at 20 °C for 0.5 h followed by the addition of methyl 2-bromoacetate (227 mg, 1.48 mmol). The reaction mixture was stirred at 20 °C for 3 h. The reaction mixture was poured into sat. aq. NH4Cl and ice water mixture (10 mL) and extracted with EtOAc (3 × 5mL). The combined organic layers were washed with brine (5 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography. LCMS: m / z = 342.0, 344.0 [M+H]+.1H NMR (400 MHz, CDCl3): δ 8.03 (d, J = 4.4 Hz, 1H), 7.51 (d, J = 8.4 Hz, 1H), 6.83 (s, 1H), 4.73-4.54 (m, 2H), 4.13-4.08 (m, 1H), 4.03-3.94 (m, 1H), 3.77 (s, 3H), 3.44 (m, 1H), 1.63-1.55 (m, 1H), 1.44-1.33 (m, 1H). Intermediates 32 and 33
[0296] Methyl 2-[(2's,4r)-6-bromo-2'-fluoro-1-oxospiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl]acetate (Int.31) could be further separated by chiral SFC (Column: Daicel Chiralpak AD (250mm x 30mm, 10 µm particle size); Mobile Phase: A: CO2, B: 0.1% NH4OH in i-PrOH; Gradient: 38%B isocratic; Flow Rate: 64 g / min; Detection Wavelength: 220 nm; Column Temperature: 40 °C; System Back Pressure: 100 bar) to provide:
[0297] methyl 2-[(2's,4r)-6-bromo-2'-fluoro-1-oxospiro[3H-isoquinoline-4,1'-cyclopropane]-2- yl]acetate (first eluting isomer, Int.32):1H NMR (400 MHz, CDCl3): δ 8.02 (d, J = 8.0 Hz, 1H), 7.51 (dd, J = 1.6, 8.4 Hz, 1H), 6.83 (d, J = 1.6 Hz, 1H), 4.73-4.54 (m, 2H), 4.10 (dd, J = 2.0, 12.4 Hz, 1H), 4.00 (d, J = 17.2 Hz, 1H), 3.77 (s, 3H), 3.44 (d, J = 12.4 Hz, 1H), 1.60-1.57 (m, 1H), 1.44-1.33 (m, 1H).
[0298] methyl 2-[(2's,4r)-6-bromo-2'-fluoro-1-oxospiro[3H-isoquinoline-4,1'-cyclopropane]-2- yl]acetate (second eluting isomer, Int.33):1H NMR (400 MHz, CDCl3): δ 8.02 (d, J = 8.0 Hz, 1H), 7.51 (dd, J = 1.6, 8.4 Hz, 1H), 6.83 (d, J = 1.6 Hz, 1H), 4.73-4.54 (m, 2H), 4.10 (dd, J = 2.0, 12.4 Hz, 1H), 4.00 (d, J = 17.2 Hz, 1H), 3.77 (s, 3H), 3.44 (d, J = 12.4 Hz, 1H), 1.60-1.57 (m, 1H), 1.44-1.33 (m, 1H).
[0299] Absolute stereochemistry of intermediates 32 and 33 were assigned based on stereochemical identification of a Table 1A compound disclosed herein. Intermediate 32 has been identified as methyl 2- ((1R,2S)-6'-bromo-2-fluoro-1'-oxo-1'H-spiro[cyclopropane-1,4'-isoquinolin]-2'(3'H)-yl)acetate. Intermediate 33 has been identified as methyl 2-((1S,2R)-6'-bromo-2-fluoro-1'-oxo-1'H- spiro[cyclopropane-1,4'-isoquinolin]-2'(3'H)-yl)acetate.Intermediate 34
[0300] 2-[(2's,4r)-6-bromo-2'-fluoro-1-oxospiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl]acetic acid: To a solution of methyl 2-[(2's,4r)-6-bromo-2'-fluoro-1-oxospiro[3H-isoquinoline-4,1'- cyclopropane]-2-yl]acetate (150 mg, 0.44 mmol, Int.33) in THF (2.0 mL) and water (2.0 mL) was added LiOH•H2O (46 mg, 1.10 mmol). The reaction mixture was stirred at 20 °C for 1 h. The reaction mixture was diluted with water (5 mL), extracted with MTBE (3 mL), and the organics were discarded. The aqueous was adjusted pH = 3 by the addition of aq. HCl (3 M) and extracted with EtOAc (3 × 2 mL). The combined organics were washed with brine (5 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure to provide a residue that was used directly. LCMS: m / z = 328.0, 330.0 [M+H]+.
[0301] Intermediate 34 has been identified as 2-((1S,2R)-6'-bromo-2-fluoro-1'-oxo-1'H- spiro[cyclopropane-1,4'-isoquinolin]-2'(3'H)-yl)acetic acid. Intermediate 35
[0302] Methyl 2-[(2'r,4r)-6-bromo-2'-fluoro-1-oxospiro[3H-isoquinoline-4,1'-cyclopropane]-2- yl]acetate: To a solution of (2'r,4r)-6-bromo-2'-fluorospiro[2,3-dihydroisoquinoline-4,1'-cyclopropane]- 1-one (210 mg, 0.77mmol, Int.30) in DMF (2.0 mL) at 0 °C was added NaH (93 mg, 2.33 mmol, 60% purity in mineral oil). The reaction mixture was stirred at 0 °C for 0.5 h followed by the addition of methyl 2-bromoacetate (119 mg, 0.78 mmol). The reaction mixture was stirred at 20 °C for 3 h. The reaction mixture was poured into a mixture of sat. aq. NH4Cl and ice water (10 mL) and extracted with EtOAc (3 × 5 mL). The combined organic layers were washed with brine (5 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography.1H NMR (400 MHz, CDCl3): δ 8.03 (d, J = 8.4 Hz, 1H), 7.54 (dd, J = 1.2, 8.4 Hz, 1H), 7.26 (s, 1H), 4.90-4.70 (m, 1H), 4.44-4.25 (m, 2H), 3.97 (dd, J = 7.6, 12.4 Hz, 1H), 3.79 (s, 3H), 2.72- 2.65 (m, 1H), 1.87-1.71 (m, 1H), 1.23-1.10 (m, 1H). Intermediate 36
[0303] methyl 2-amino-4-bromo-3-fluorobenzoate: To a solution of 2-amino-4-bromo-3-fluoro- benzoic acid (40.0 g, 170 mmol) in DCM (500 mL) and MeOH (500 mL) at 0 °C was added TMSCHN2(2 M in n-hexane, 427 mL, 854 mmol). The mixture was stirred for 16 h at 15 °C, cooled to 0 °C, and TMSCHN2(2 M in hexane, 171 mL) was added. The mixture was stirred for another 16 h at 15 °C. The mixture was quenched by addition of sat. aq. NH4Cl (500 mL) and H2O (500 mL). The mixture was concentrated under reduced pressure to remove organic solvent. The white precipitate was filtered and dried under reduced pressure. The filter cake was then suspended in n-hexane (300 mL), stirred for 10 min, filtered, and dried under reduced pressure to provide a residue that was used directly. LCMS: m / z = 247.9, 249.9 [M+H]+.
[0304] methyl 4-bromo-3-fluoro-2-iodobenzoate: To a solution of methyl 2-amino-4-bromo-3-fluoro- benzoate (42.0 g, 170 mmol) in H2SO4 (420 mL) and MeCN (420 mL) at 0 °C was added a solution of NaNO2 (14 g, 203 mmol) in H2O (60 mL). The mixture was stirred for 1 h at 0 °C followed by the addition of a solution of KI (56 g, 338 mmol) in H2O (60 mL). The mixture was stirred for 15 h at 15 °C. The mixture was cooled to 0 °C, diluted with sat. aq. Na2S2O3 (1000 mL), and extracted with MTBE (4 × 500 mL). The combined organic layers were washed with brine (500 mL), dried over anhydrous Na2SO4, filtered, concentrated under reduced pressure, and purified by silica gel column chromatography.
[0305] methyl 4-bromo-3-fluoro-2-vinylbenzoate: To a solution of methyl 4-bromo-3-fluoro-2-iodo- benzoate (12.0 g, 33.0 mmol) and potassium hydride:trifluoro(vinyl)boron (5.6 g, 41.7 mmol) in 1,4- dioxane (300 mL) were added CsF (20.3 g, 133.7 mmol) and Pd(dppf)Cl2 (4.89 g, 6.69 mmol). The mixture was stirred for 16 h at 100 °C. The mixture was filtered, the filtrate was diluted with water (1000 mL) and extracted with EtOAc (3 × 300 mL). The combined organic layers were washed with brine (100 mL), dried over anhydrous Na2SO4, filtered, concentrated under reduced pressure, and purified by silica gel column chromatography.1H NMR (400 MHz, CDCl3): δ 7.56-7.47 (m, 2H), 7.01 (dd, J = 11.6, 18 Hz, 1H), 5.81-5.72 (m, 1H), 5.66 (td, J = 1.2, 12.8 Hz, 1H), 3.90 (s, 3H).
[0306] methyl 4-bromo-2-(1-cyanovinyl)-3-fluoro-benzoate (Int.36): To a solution of 6,6'-dimethyl- 2,2'-bipyridine (711 mg, 3.86 mmol), Cu2O (2.76 g, 19.3 mmol) and SelectFluor (10.3 g, 29.0 mmol) in acetone (60 mL) and water (30 mL) at 0 °C were added a solution of methyl 4-bromo-3-fluoro-2-vinyl- benzoate (5.0 g, 19.3 mmol) in acetone (5 mL) and TMSCN (3.83 g, 38.6 mmol, 4.83 mL). The mixture was stirred for 16 h at 20 °C. The mixture was quenched with H2O (100 mL) and extracted with EtOAc (5 × 30 mL). The combined organic layers were washed with brine (30 mL), dried over anhydrous Na2SO4, filtered, concentrated under reduced pressure, and purified by silica gel column chromatography. LCMS: m / z = 283.9, 285.9 [M+H]+. Intermediate 37 and 38
[0307] methyl 4-bromo-3-fluoro-2-[(1s,2r)-1-cyano-2-fluoro-cyclopropyl]benzoate and methyl 4- bromo-3-fluoro-2-[(1s,2s)-1-cyano-2-fluoro-cyclopropyl]benzoate: To a solution of methyl 4-bromo-2- (1-cyanovinyl)-3-fluoro-benzoate (6.0 g, 21.1 mmol, Int.36) and (fluoromethyl)(phenyl)(2,3,4,5-tetramethylphenyl)sulfonium tetrafluoroborate (11.5 g, 31.7 mmol) in THF (80 mL) at 0 °C was added NaH (3.38 g, 84.5 mmol, 60% purity). The mixture was stirred for 1 h at 20 °C. The mixture was cooled to 0 °C, diluted with sat. aq. NH4Cl (150 mL), and extracted with EtOAc (3 × 50 mL). The combined organic layers were washed with brine (50 mL), dried over anhydrous Na2SO4, filtered, concentrated under reduced pressure, and purified by silica gel column chromatography to provide:
[0308] methyl 4-bromo-3-fluoro-2-[(1s,2r)-1-cyano-2-fluoro-cyclopropyl]benzoate (Int.37):1H NMR (400 MHz, CDCl3): δ 7.73-7.66 (m, 2H), 4.83-4.63 (m, 1H), 4.03 (s, 3H), 2.39-2.28 (m, 1H), 1.67- 1.57 (m, 1H).
[0309] methyl 4-bromo-3-fluoro-2-[(1s,2s)-1-cyano-2-fluoro-cyclopropyl]benzoate (Int.38):1H NMR (400 MHz, CDCl3): δ 7.74-7.67 (m, 2H), 5.29-5.06 (m, 1H), 3.99 (s, 3H), 2.37-2.29 (m, 1H), 1.78- 1.67 (m, 1H). Intermediate 39
[0310] (2's,4r)-6-bromo-2',5-difluorospiro[2,3-dihydroisoquinoline-4,1'-cyclopropane]-1-one: To a solution of methyl 4-bromo-3-fluoro-2-[(1s,2r)-1-cyano-2-fluoro-cyclopropyl]benzoate (5.8 g, 18.3 mmol, Int.37) and CoCl2(9.5 g, 73.4 mmol) in MeOH (180 mL) and H2O (4.5 mL) at 0 °C was added NaBH4 (2.78 g, 73.4 mmol). The mixture was stirred for 2 h at 20 °C. Additional NaBH4 (694 mg, 18.3 mmol) was then added to the solution. The mixture was stirred for a further 1 h. The mixture was quenched by sat. aq. NH4Cl (200 mL) at 0 °C and extracted with EtOAc (3 × 60 mL). The combined organic layers were washed with brine (60 mL), dried over anhydrous Na2SO4, filtered, concentrated under reduced pressure and purified by silica gel column chromatography. LCMS: m / z = 287.9, 289.9 [M+H]+. Intermediate 40 and 41
[0311] ethyl 2-[(2's,4r)-6-bromo-2',5-difluoro-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2- yl]acetate: To a solution of (2's,4r)-6-bromo-2',5-difluorospiro[2,3-dihydroisoquinoline-4,1'- cyclopropane]-1-one (1.2 g, 4.17 mmol, Int.39) in DMF (20 mL) at 0 °C was added Cs2CO3(2.71 g, 8.33 mmol). The mixture was stirred for 0.5 h. Ethyl 2-iodoacetate (1.34 g, 6.25 mmol, 0.74 mL) was added to the solution. The mixture was stirred for 2 h at 15 °C. The mixture was quenched with H2O (45 mL) and extracted with EtOAc (3 × 15 mL). The combined organic layers were washed with brine (10 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The mixture was purified by silica gel column chromatography. The mixture was further purified by reverse-phase preparative HPLC.The mixture was further purified by chiral SFC (Column: Daicel Chiralpak AS (250 mm x 30 mm, 10 µm particle size); Mobile phase: A: CO2 and B: i-PrOH; Gradient: 15% B isocratic; Flowrate: 55 g / min; Detection wavelength: 220 nm; Column temperature: 35 °C; System back pressure: 100 bar) to provide:
[0312] ethyl 2-[(2's,4r)-6-bromo-2',5-difluoro-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2- yl]acetate (first eluting isomer, Int.40): LCMS: m / z = 373.9, 375.9 [M+H]+.1H NMR (400 MHz, CDCl3): δ 7.87 (d, J = 8.0 Hz, 1H), 7.58-7.51 (m, 1H), 5.48-5.23 (m, 1H), 4.60 (d, J = 17.2 Hz, 1H), 4.23 (q, J = 7.2 Hz, 2H), 4.05 (d, J = 17.2 Hz, 1H), 3.79 (dd, J = 2.4, 12.8 Hz, 1H), 3.63 (d, J = 12.8 Hz, 1H), 1.89 (td, J = 7.2, 14.0 Hz, 1H), 1.55-1.40 (m, 1H), 1.30 (t, J = 7.2 Hz, 3H).
[0313] ethyl 2-[(2's,4r)-6-bromo-2',5-difluoro-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2- yl]acetate (second eluting isomer, Int.41): LCMS: m / z = 373.9, 375.9 [M+H]+.1H NMR (400 MHz, CDCl3): δ 7.87 (d, J = 8.0 Hz, 1H), 7.58-7.51 (m, 1H), 5.48-5.23 (m, 1H), 4.60 (d, J = 17.2 Hz, 1H), 4.23 (q, J = 7.2 Hz, 2H), 4.05 (d, J = 17.2 Hz, 1H), 3.79 (dd, J = 2.4, 12.8 Hz, 1H), 3.63 (d, J = 12.8 Hz, 1H), 1.89 (td, J = 7.2, 14.0 Hz, 1H), 1.55-1.40 (m, 1H), 1.30 (t, J = 7.2 Hz, 3H). Intermediate 42 and 43
[0314] methyl 2-[(2's,4r)-6-bromo-2',5-difluoro-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2- yl]acetate: To a solution of (2's,4r)-6-bromo-2',5-difluorospiro[2,3-dihydroisoquinoline-4,1'- cyclopropane]-1-one (31.0 g, 107 mmol, Int.39) and NaI (1.61 g, 10.8 mmol) in DMF (350 mL) at 0 °C were added Cs2CO3(70 g, 215 mmol) and methyl 2-bromoacetate (19.7 g, 129 mmol). The mixture was stirred at 20 °C for 16 h. The reaction mixture was quenched by addition of aq. HCl (1 M, 700 mL) at 0 °C and extracted with EtOAc (3 × 200 mL). The combined organic layers were washed with brine (3 × 350 mL), dried over Na2SO4, filtered and concentrated under reduced pressure. The residue was purified by reverse-phase HPLC. The mixture was further by chiral SFC (Column: Daicel Chiralpak IG (250 mm × 50 mm, 10 µm particle size); Mobile phase: A: CO2and B: MeOH; Gradient: 35% B isocratic; Flow rate: 200 g / min; Detection wavelength: 220nm; Column temperature: 40 °C; System back pressure: 100 bar) to provide:
[0315] methyl 2-[(2's,4r)-6-bromo-2',5-difluoro-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2- yl]acetate (first eluting isomer, Int.42): LCMS: m / z = 359.9, 361.9 [M+H]+.1H NMR (400 MHz, CDCl3): δ 7.87 (dd, J = 1.0, 8.4 Hz, 1H), 7.54 (dd, J = 6.4, 8.4 Hz, 1H), 5.44-5.23 (m, 1H), 4.60 (d, J = 17.6 Hz, 1H), 4.12-4.00 (m, 1H), 3.81-3.77 (m, 4H), 3.62 (d, J = 12.8 Hz, 1H), 1.93-1.87 (m, 1H), 1.54- 1.41 (m, 1H).
[0316] methyl 2-[(2's,4r)-6-bromo-2',5-difluoro-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2- yl]acetate (second eluting isomer, Int.43): LCMS: m / z = 359.9, 361.9 [M+H]+.1H NMR (400 MHz, CDCl3): δ 7.87 (dd, J = 0.8, 8.4 Hz, 1H), 7.54 (dd, J = 6.4, 8.4 Hz, 1H), 5.46-5.23 (m, 1H), 4.60 (d, J =17.6 Hz, 1H), 4.08 (d, J = 17.6 Hz, 1H), 3.81 (d, J = 2.6 Hz, 1H), 3.78 (s, 3H), 3.63 (d, J = 12.9 Hz, 1H), 1.93-1.87 (m, 1H), 1.55-1.40 (m, 1H). Intermediate 44
[0317] methyl 2-[(2's,4r)-6-cyclopropyl-2',5-difluoro-1-oxo-spiro[3H-isoquinoline-4,1'- cyclopropane]-2-yl]acetate: To a solution of methyl 2-[(2's,4r)-6-bromo-2',5-difluoro-1-oxo-spiro[3H- isoquinoline-4,1'-cyclopropane]-2-yl]acetate (50 mg, 0.14 mmol, Int.43) and potassium cyclopropyltrifluoroborate (62 mg, 0.42 mmol) in 1,4-dioxane (1.0 mL) and H2O (0.1 mL) were added CsF (63 mg, 0.42 mmol) and Pd(dppf)Cl2(10 mg, 0.014 mmol). The mixture was stirred at 100 °C for 16 h. The reaction mixture was quenched with H2O (6 mL) and extracted with EtOAc (3 × 2 mL). The combined organic layers were washed with brine (3 mL), dried over anhydrous Na2SO4, filtered, concentrated under reduced pressure, and purified by silica gel column chromatography. LCMS: m / z = 322.0 [M+H]+. Intermediate 45
[0318] methyl 2-[(2's,4r)-6-cyclopropyl-2'-fluoro-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]- 2-yl]acetate: To a solution of methyl 2-[(2's,4r)-6-bromo-2'-fluoro-1-oxospiro[3H-isoquinoline-4,1'- cyclopropane]-2-yl]acetate (100 mg, 0.30 mmol, Int.33) and cyclopropylboronic acid (75 mg, 0.88 mmol) in 1,4-dioxane (2 mL) were added Pd(dppf)Cl2 (21 mg, 0.03 mmol) and CsF (133 mg, 0.88 mmol). The mixture was stirred at 100 °C for 6 h. The mixture was added H2O (5 mL) and extracted with EtOAc (3 × 5 mL). The combined organic layers were washed with brine (5 mL), dried over anhydrous Na2SO4, filtered, concentrated under reduced pressure, and purified by silica gel column chromatography.1H NMR (400 MHz, CDCl3): δ 8.04 (d, J = 8.4 Hz, 1H), 7.01-6.98 (m, 1H), 6.39 (s, 1H), 4.72-4.52 (m, 2H), 4.07 (dd, J = 2.4, 12.0 Hz, 1H), 4.01 (d, J = 18.0 Hz, 1H), 3.76 (s, 3H), 3.43 (d, J = 12.4 Hz, 1H), 1.97-1.83 (m, 1H), 1.26 (s, 2H), 1.08-1.00 (m, 2H), 0.76-0.70 (m, 2H).
[0319] Intermediate 45 has been identified as methyl 2-((1S,2R)-6'-cyclopropyl-2-fluoro-1'-oxo-1'H- spiro[cyclopropane-1,4'-isoquinolin]-2'(3'H)-yl)acetate.Intermediate 46 and 47
[0320] methyl 4-(trifluoromethyl)-2-vinylbenzoate: To a solution of methyl 2-bromo-4- (trifluoromethyl)benzoate (100 g, 353 mmol) in 1,4-dioxane (2000 mL) was added potassium vinyltrifluoroborate (52 g, 388 mmol), CsF (161 g, 1.06 mol) and Pd(dppf)Cl2(12.9 g, 17.7 mmol). The mixture was stirred at 90 °C for 6 h. The mixture was diluted with H2O (2000 mL) and extracted with EtOAc (3 × 700 mL). The combined organic layers were washed with brine (1500 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography.
[0321] methyl 2-(1-cyanovinyl)-4-(trifluoromethyl)benzoate: To a solution of Cu2O (31.0 g, 217 mmol), 6,6'-dimethyl-2,2'-bipyridine (8.0 g, 43 mmol) and SelectFluor (115 g, 325 mmol) in acetone (1 L) and H2O (500 mL) were added dropwise methyl 4-(trifluoromethyl)-2-vinylbenzoate (50 g, 217 mmol) and TMSCN (64.6 g, 652 mmol). The mixture was stirred at 20 °C for 20 h. The mixture was poured into aq. sat. NaHCO3(200 mL) and H2O (800 mL). The mixture was filtered and the filtrate was extracted with EtOAc (3 × 300 mL). The combined organic layers were washed with brine (600 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography. LCMS: m / z = 256.0 [M+H]+.
[0322] methyl 2-[(1r,2s)-1-cyano-2-fluoro-cyclopropyl]-4-(trifluoromethyl)benzoate and methyl 2- [(1s,2s)-1-cyano-2-fluoro-cyclopropyl]-4-(trifluoromethyl)benzoate: To a solution of methyl 2-(1- cyanovinyl)-4-(trifluoromethyl)benzoate (11.0 g, 43.1 mmol) in THF (200 mL) at 0 °C were added (fluoromethyl)(phenyl)(2,3,4,5-tetramethylphenyl)sulfonium tetrafluoroborate (31.0 g, 86 mmol) and NaH (6.9 g, 172 mmol, 60% purity). The mixture was stirred at 20 °C for 1 h. The reaction mixture was poured into H2O (30 mL) and extracted with EtOAc (3 × 10 mL). The combined organic layers were washed with brine (30 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography. LCMS: m / z = 288.0 [M+H]+.
[0323] (2's,4r)-2'-fluoro-6-(trifluoromethyl)spiro[2,3-dihydroisoquinoline-4,1'-cyclopropane]-1-one and (2's,4s)-2'-fluoro-6-(trifluoromethyl)spiro[2,3-dihydroisoquinoline-4,1'-cyclopropane]-1-one: To a solution of methyl 2-[(1r,2s)-1-cyano-2-fluoro-cyclopropyl]-4-(trifluoromethyl)benzoate and methyl 2- [(1s,2s)-1-cyano-2-fluoro-cyclopropyl]-4-(trifluoromethyl)benzoate (12.0 g, 41.0 mmol) in MeOH (120 mL) was added Raney-Ni (5.0 g, 58.0 mmol). The mixture was stirred at 20 °C for 1 h under H2 (30 psi).The mixture was filtered, and the filtrate was concentrated under reduced pressure. The residue was purified by silica gel column chromatography to provide:
[0324] (2's,4r)-2'-fluoro-6-(trifluoromethyl)spiro[2,3-dihydroisoquinoline-4,1'-cyclopropane]-1- one (Int.46): LCMS: m / z = 260.0 [M+H]+.1H NMR (400 MHz, CDCl3): δ 8.27 (d, J = 8.0 Hz, 1H), 7.65 (d, J = 8.0 Hz, 1H), 7.04 (br s, 1H), 6.95 (s, 1H), 4.75-4.52 (m, 1H), 3.91 (d, J = 12.8 Hz, 1H), 3.58 (dd, J = 4.4, 13.2 Hz, 1H), 1.61-1.72 (m, 1H), 1.47-1.36 (m, 1H);
[0325] (2's,4s)-2'-fluoro-6-(trifluoromethyl)spiro[2,3-dihydroisoquinoline-4,1'-cyclopropane]-1-one (Int 47): LCMS: m / z = 260.0 [M+H]+.1H NMR (400 MHz, CDCl3): δ 8.27 (d, J = 8.4 Hz, 1H), 7.67 (dd, J = 0.8, 8.0 Hz, 1H), 7.48 (br s, 1H), 7.37 (s, 1H), 4.89-4.62 (m, 1H), 3.81 (dd, J = 7.6, 12.8 Hz, 1H), 2.81 (dd, J = 4.8, 13.2 Hz, 1H), 1.93-1.79 (m, 1H), 1.25-1.18 (m, 1H). Intermediate 48
[0326] methyl 2-[(2's,4r)-2'-fluoro-1-oxo-6-(trifluoromethyl)spiro[3H-isoquinoline-4,1'- cyclopropane]-2-yl]acetate: To a solution of (2's,4r)-2'-fluoro-6-(trifluoromethyl)spiro[2,3- dihydroisoquinoline-4,1'-cyclopropane]-1-one (2.4 g, 9.3 mmol, Int.46) in DMF (30 mL) at 0 °C was added NaH (560 mg, 13.9 mmol, 60% purity). The mixture was stirred for 0.5 h at 0 °C. To the mixture was added methyl 2-bromoacetate (2.83 g, 18.5 mmol) at 0 °C. The mixture was stirred at 20 °C for 2 h. The mixture was poured into sat. aq. NH4Cl (30 mL) and extracted with EtOAc (3 × 10 mL). The combined organic layers were washed with brine (20 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography. LCMS: m / z = 332.2 [M+H]+. Intermediate 49
[0327] 2-[(2's,4r)-2'-fluoro-1-oxo-6-(trifluoromethyl)spiro[3H-isoquinoline-4,1'-cyclopropane]-2- yl]acetic acid: To a solution of methyl 2-[(2's,4r)-2'-fluoro-1-oxo-6-(trifluoromethyl)spiro[3H- isoquinoline-4,1'-cyclopropane]-2-yl]acetate (150 mg, 0.45 mmol, Int.48) in THF (2.0 mL) and H2O (2.0 mL) was added LiOH•H2O (47 mg, 1.1 mmol). The mixture was stirred at 20 °C for 2 h. The mixture was diluted with H2O (3 mL) and extracted with MTBE (2 mL). The aqueous phase was adjusted to pH = 3 by addition of aq. HCl (3 M). The mixture was extracted with EtOAc (3 × 2 mL). The combined organic layers were washed with brine (3 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure to give a crude residue that was used directly. LCMS: m / z = 317.9 [M+H]+.Intermediate 50
[0328] methyl 2-[(2's,4r)-2'-fluoro-6-iodo-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2- yl]acetate: A mixture of methyl 2-[(2's,4r)-6-bromo-2'-fluoro-1-oxospiro[3H-isoquinoline-4,1'- cyclopropane]-2-yl]acetate (200 mg, 0.58 mmol, Int.33), CuI (22 mg, 0.12 mmol), NaI (350 mg, 2.34 mmol) and (1R,2R)-N1,N2-dimethylcyclohexane-1,2-diamine (33 mg, 0.23 mmol) in toluene (4 mL) was degassed and purged with N2. The mixture was stirred at 130 °C for 32 h. The reaction mixture was washed with H2O (5 mL) and extracted with EtOAc (3 × 5 mL). The combined organic layers were washed with brine (5 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure to provide a residue that was used directly.1H NMR (400 MHz, CDCl3): δ 7.86 (d, J = 8.4 Hz, 1H), 7.73 (dd, J = 8.4, 1.6 Hz, 1H), 7.04 (d, J = 1.2 Hz, 1H), 4.66-4.53 (m, 2H), 4.09 (dd, J = 12.4, 1.6 Hz, 1H), 3.99 (d, J = 17.2 Hz, 1H), 3.77 (s, 3H), 3.43 (d, J = 12.8 Hz, 1H), 1.60-1.56 (m, 1H), 1.33-1.43 (m, 1H).
[0329] Intermediate 50 has been identified as methyl 2-((1S,2R)-2-fluoro-6'-iodo-1'-oxo-1'H- spiro[cyclopropane-1,4'-isoquinolin]-2'(3'H)-yl)acetate. Intermediate 51
[0330] tert-butyl 2-[(2's,4r)-6-bromo-2'-fluoro-1-oxospiro[3H-isoquinoline-4,1'-cyclopropane]-2- yl]acetate: To a solution of 2-[(2's,4r)-6-bromo-2'-fluoro-1-oxospiro[3H-isoquinoline-4,1'- cyclopropane]-2-yl]acetic acid (1.25 g, 3.81 mmol, Int.34) in DCM (20 mL) at 0 °C were added DMAP (465 mg, 3.81 mmol), DCC (865 mg, 4.19 mmol), and t-BuOH (424 mg, 5.71 mmol). The mixture was stirred at 20 °C for 16 h. The mixture was filtered and the filtrate was washed with aq. sat. Na2CO3 (3 × 200 mL). The combined organic layers were washed with brine (2 × 20 mL), dried over anhydrous Na2SO4, filtered, concentrated under reduced pressure, and purified by silica gel column chromatography.1H NMR (400 MHz, CDCl3): δ 8.03 (d, J = 8.0 Hz, 1H), 7.50 (dd, J = 2.0, 8.4 Hz, 1H), 6.82 (d, J = 2.0Hz, 1H), 4.73-4.51 (m, 2H), 4.07 (dd, J = 1.6, 12.4 Hz, 1H), 3.85 (d, J = 17.2 Hz, 1H), 3.43 (d, J = 12.4 Hz, 1H), 1.58-1.54 (m, 1H), 1.48 (s, 9H), 1.44-1.33 (m, 1H).
[0331] tert-butyl 2-[(2's,4r)-2'-fluoro-1-oxo-6-vinylspiro[3H-isoquinoline-4,1'-cyclopropane]-2- yl]acetate: To a solution of tert-butyl 2-[(2's,4r)-6-bromo-2'-fluoro-1-oxospiro[3H-isoquinoline-4,1'- cyclopropane]-2-yl]acetate (500 mg, 1.30 mmol), potassium trifluoro(vinyl)borate (436 mg, 3.25 mmol) in 1,4-dioxane (10 mL) were added CsF (593 mg, 3.90 mmol) and Pd(dppf)Cl2 (95 mg, 0.13 mmol). The mixture was stirred at 90 °C for 3 h. The reaction mixture was poured into H2O (20 mL) and extracted with EtOAc (4 × 15 mL). The combined organic layers were washed with brine (2 × 10 mL), dried over anhydrous Na2SO4, filtered, concentrated under reduced pressure, and purified by silica gel column chromatography. LCMS: m / z = 276.2 [M-tBu+H]+.1H NMR (400 MHz, CDCl3): δ 8.13 (d, J = 8.0 Hz, 1H), 7.41 (dd, J = 1.6, 8.0 Hz, 1H), 6.75-6.68 (m, 1H), 6.66 (d, J = 1.6 Hz, 1H), 5.82 (d, J = 17.6 Hz, 1H), 5.37 (d, J = 11.2 Hz, 1H), 4.75-4.53 (m, 2H), 4.07 (dd, J = 2.0, 12.8 Hz, 1H), 3.87 (d, J = 17.2 Hz, 1H), 3.44 (d, J = 12.8 Hz, 1H), 1.64-1.60 (m, 1H), 1.48 (s, 9H), 1.42-1.31 (m, 1H).
[0332] tert-butyl 2-[(2's,4r)-2'-fluoro-1-oxo-6-(2-bromo-1-fluoroethyl)spiro[3H-isoquinoline-4,1'- cyclopropane]-2-yl]acetate: To a solution of tert-butyl 2-[(2's,4r)-2'-fluoro-1-oxo-6-vinylspiro[3H- isoquinoline-4,1'-cyclopropane]-2-yl]acetate (1.04 g, 3.14 mmol) in DCM (20 mL) at 0 °C were added NBS (614 mg, 3.45 mmol) and triethylamine tris(hydrogen fluoride) (759 mg, 4.71 mmol). The mixture was stirred at 0 °C for 15 min then stirred at 20 °C for 16 h. The mixture was poured into H2O (10 mL) and extracted with DCM (3 × 10 mL). The combined organic layers were washed with brine (30 mL), dried over anhydrous Na2SO4, filtered, concentrated under reduced pressure, and purified by silica gel column chromatography. LCMS: m / z = 374.0, 376.0 [M-tBu+H]+.1H NMR (400 MHz, CDCl3): δ 8.20 (d, J = 8.0 Hz, 1H), 7.31 (br d, J = 8.0 Hz, 1H), 6.70 (s, 1H), 5.73-5.55 (m, 1H), 4.75-4.52 (m, 2H), 4.15-4.04 (m, 1H), 3.87 (dd, J = 4.8, 17.2 Hz, 1H), 3.68-3.57 (m, 2H), 3.46 (dd, J = 6.4, 12.8 Hz, 1H), 1.66-1.59 (m, 1H), 1.49 (s, 9H), 1.45-1.35 (m, 1H).
[0333] tert-butyl 2-[(2's,4r)-2'-fluoro-1-oxo-6-(1-fluorovinyl)spiro[3H-isoquinoline-4,1'- cyclopropane]-2-yl]acetate: To a solution of tert-butyl 2-[(2's,4r)-2'-fluoro-1-oxo-6-(2-bromo-1- fluoroethyl)spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl]acetate (1.07 g, 2.49 mmol) in DMSO (20 mL) was added DBU (568 mg, 3.73 mmol). The mixture was stirred at 60 °C for 1 h. The reaction mixture was poured into H2O (100 mL) and extracted with EtOAc (3 × 20 mL). The combined organic layers were washed with brine (30 mL), dried over anhydrous Na2SO4, filtered, concentrated under reduced pressure, and purified by silica gel column chromatography. LCMS: m / z = 294.1 [M-t-Bu+H]+.1H NMR (400 MHz, CDCl3): δ 8.27 (d, J = 8.0 Hz, 1H), 7.64 (d, J = 8.0 Hz, 1H), 6.93 (s, 1H), 5.23 (dd, J = 3.6, 49.2 Hz, 1H), 5.07 (dd, J = 3.6, 17.6 Hz, 1H), 4.87-4.62 (m, 2H), 4.26-4.11 (m, 1H), 4.02-3.91 (m, 1H), 3.64-3.50 (m, 1H), 1.74-1.67 (m, 1H), 1.58 (s, 9H), 1.54-1.44 (m, 1H).
[0334] tert-butyl 2-[(2's,4r)-2'-fluoro-1-oxo-6-(2,2-dichloro-1-fluorocyclopropyl)spiro[3H- isoquinoline-4,1'-cyclopropane]-2-yl]acetate: To a solution of tert-butyl 2-[(2's,4r)-2'-fluoro-1-oxo-6- (1-fluorovinyl)spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl]acetate (650 mg, 1.86 mmol) in CHCl3(15mL) at 0 °C were added benzyltriethylammonium chloride (17 mg, 0.07 mmol) followed by aq. NaOH (4.47 g, 55.8 mmol, 50 wt%) dropwise. The mixture was stirred at 0 °C for 0.5 h. The mixture was then stirred at 20 °C for 3 h. The reaction mixture was poured into ice-cold H2O (20 mL) and extracted with DCM (2 × 10 mL). The combined organic layers were washed with aq. HCl (20 mL, 0.1 M), aq. sat. NaHCO3(20 ml), and brine (20 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography. LCMS: m / z = 375.9, 377.0, 377.9 [M- t-Bu +H]+.1H NMR (400 MHz, CDCl3): δ 8.22 (d, J = 8.0 Hz, 1H), 7.40-7.31 (m, 1H), 6.89-6.81 (m, 1H), 4.76-4.56 (m, 2H), 4.18-4.05 (m, 1H), 3.87 (dd, J = 3.2, 17.2 Hz, 1H), 3.52-3.42 (m, 1H), 2.36-2.19 (m, 2H), 1.70-1.62 (m, 1H), 1.49 (s, 9H), 1.46-1.36 (m, 1H).
[0335] tert-butyl 2-[(2's,4r)-2'-fluoro-1-oxo-6-(1-fluorocyclopropyl)spiro[3H-isoquinoline-4,1'- cyclopropane]-2-yl]acetate: To a solution tert-butyl 2-[(2's,4r)-2'-fluoro-1-oxo-6-(2,2-dichloro-1- fluorocyclopropyl)spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl]acetate (100 mg, 0.23 mmol) in tri-n- butyl-tin hydride (660 mg, 2.27 mmol) was added AIBN (3.80 mg, 0.023 mmol). The mixture was stirred at 160 °C for 3 h. The reaction mixture was poured into aq. sat. KF (20 mL). The mixture was stirred 1 h at 20 °C and extracted with EtOAc (4 × 10 mL). The combined organic layers were washed with brine (10 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by preparative silica gel thin-layer chromatography. LCMS: m / z = 308.1 [M-tBu+H]+.1H NMR (400 MHz, CDCl3): δ 8.13 (dd, J = 0.8, 8.0 Hz, 1H), 6.99 (d, J = 8.0 Hz, 1H), 6.71 (d, J = 1.6 Hz, 1H), 4.77-4.53 (m, 2H), 4.08 (dd, J = 2.0, 12.8 Hz, 1H), 3.87 (d, J = 17.6 Hz, 1H), 3.45 (d, J = 12.6 Hz, 1H), 1.59-1.51 (m, 2H), 1.48 (s, 9H), 1.43-1.32 (m, 2H), 1.14-1.09 (m, 2H).
[0336] 2-[(2's,4r)-2'-fluoro-1-oxo-6-(1-fluorocyclopropyl)spiro[3H-isoquinoline-4,1'-cyclopropane]- 2-yl]acetic acid: To a solution of tert-butyl 2-[(2's,4r)-2'-fluoro-1-oxo-6-(1-fluorocyclopropyl)spiro[3H- isoquinoline-4,1'-cyclopropane]-2-yl]acetate (190 mg, 0.52 mmol) in DCM (4.0 mL) was added formic acid (1.0 mL). The mixture was stirred at 40 °C for 12 h. The mixture was concentrated under reduced pressure to provide a residue that was used directly. LCMS: m / z = 306.2 [M-H]-.
[0337] methyl 2-[(2's,4r)-2'-fluoro-1-oxo-6-(1-fluorocyclopropyl)spiro[3H-isoquinoline-4,1'- cyclopropane]-2-yl]acetate (Int.51): To a solution of 2-[(2's,4r)-2'-fluoro-1-oxo-6-(1- fluorocyclopropyl)spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl]acetic acid (77 mg, 0.25 mmol) in DMF (2.0 mL) were added K2CO3(52 mg, 0.38 mmol) and MeI (43 mg, 0.3 mmol). The mixture was stirred at 20 °C for 2 h. The reaction mixture was poured into H2O (10 mL) and extracted with EtOAc (3 × 5 mL). The combined organic layers were washed with brine (2 × 10 mL), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure. The residue was purified by preparative silica gel thin-layer chromatography. LCMS: m / z = 322.1 [M+H]+.
[0338] Intermediate 51 has been identified as methyl 2-((1S,2R)-2-fluoro-6'-(1-fluorocyclopropyl)-1'- oxo-1'H-spiro[cyclopropane-1,4'-isoquinolin]-2'(3'H)-yl)acetate.Intermediate 52
[0339] 6-bromo-2-[(4-methoxyphenyl)methyl]spiro[3H-isoquinoline-4,1'-cyclopropane]-1-one: To a solution of 6'-bromo-2',3'-dihydro-1'H-spiro[cyclopropane-1,4'-isoquinolin]-1'-one (5.0 g, 19.9 mmol, Int.1) in THF (100 mL) at 0 °C were added PMBCl (3.73 g, 23.8 mmol) and NaH (1.59 g, 39.7 mmol, 60% purity). The mixture was stirred at 50 °C for 12 h. The reaction mixture was poured into aq. sat. NH4Cl (100 mL) and extracted with EtOAc (3 × 50 mL). The combined organic layers were washed with brine (50 mL), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure. The residue was purified by silica gel column chromatography.1H NMR (400 MHz, CDCl3): δ 8.05 (d, J = 8.0 Hz, 1H), 7.45 (dd, J = 2.0, 8.4 Hz, 1H), 7.24 (d, J = 8.4 Hz, 2H), 6.95 (d, J = 1.6 Hz, 1H), 6.89-6.85 (m, 2H), 4.71 (s, 2H), 3.81 (s, 3H), 3.20 (s, 2H), 1.04-0.99 (m, 2H), 0.77-0.72 (m, 2H). Intermediates 53 and 54
[0340] 6'-(1-fluorovinyl)-2'-(4-methoxybenzyl)-2',3'-dihydro-1'H-spiro[cyclopropane-1,4'- isoquinolin]-1'-one: To a solution of 6'-bromo-2'-(4-methoxybenzyl)-2',3'-dihydro-1'H- spiro[cyclopropane-1,4'-isoquinolin]-1'-one (3 g, 8.06 mmol, Int.52) and (1- fluorovinyl)(methyl)diphenylsilane (2.93 g, 12.1 mmol) in 1,3-dimethylimidazolidin-2-one (30 mL) were added CuI (306 mg, 1.61 mmol), Pd(dppf)Cl2 (590 mg, 0.81 mmol), and CsF (3.06 g, 20.1 mmol). The mixture was stirred for 16 h. The reaction mixture was quenched by addition of H2O (50 mL) and extracted with EtOAc (3 × 20 mL). The combined organic layers were washed with brine (3 × 10 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography. LCMS: m / z = 338.0 [M+H]+.
[0341] 6'-(2-bromo-1,2-difluorocyclopropyl)-2'-(4-methoxybenzyl)-2',3'-dihydro-1'H- spiro[cyclopropane-1,4'-isoquinolin]-1'-one: To a solution of 6'-(1-fluorovinyl)-2'-(4-methoxybenzyl)- 2',3'-dihydro-1'H-spiro[cyclopropane-1,4'-isoquinolin]-1'-one (800 mg, 2.37 mmol) in H2O (2 mL) and DCM (10 mL) at 0 °C were added benzyltriethylammonium chloride (54 mg, 0.24 mmol), dibromo(fluoro)methane (2.27 g, 11.9 mmol) and aq. NaOH (190 mg, 2.37 mmol, 50 wt%). The mixture was stirred at 20 °C for 16 h. The reaction mixture was quenched by addition of aq. sat. NH4Cl (30 mL) and extracted with EtOAc (3 × 20 mL). The combined organic layers were washed with brine (3 × 10mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography. LCMS: m / z = 447.9, 450.0 [M+H]+.
[0342] 6-[(1r,2r)-1,2-difluorocyclopropyl]-2-[(4-methoxyphenyl)methyl]spiro[3H-isoquinoline-4,1'- cyclopropane]-1-one and 6-[(1r,2s)-1,2-difluorocyclopropyl]-2-[(4-methoxyphenyl)methyl]spiro[3H- isoquinoline-4,1'-cyclopropane]-1-one: A solution of 6'-(2-bromo-1,2-difluorocyclopropyl)-2'-(4- methoxybenzyl)-2',3'-dihydro-1'H-spiro[cyclopropane-1,4'-isoquinolin]-1'-one (1.8 g, 4.02 mmol) and AIBN (65.93 mg, 0.401 mol) in toluene (15 mL) was degassed with N2. To this mixture was added a solution of tributylstannane (4.32 g, 14.86 mmol) in toluene (2 mL). The reaction mixture was stirred at 70 °C for 3 h. The mixture was quenched by addition of aq. sat. KF (20 mL) and extracted with EtOAc (3 × 30 mL). The combined organic layers were washed with brine (3 × 20 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography and further purified by reverse-phase preparative HPLC to provide:
[0343] 6-[(1r,2s)-1,2-difluorocyclopropyl]-2-[(4-methoxyphenyl)methyl]spiro[3H-isoquinoline-4,1'- cyclopropane]-1-one (Int.53):1H NMR (400 MHz, CDCl3): δ = 8.22 (d, J = 8.0 Hz, 1H), 7.33 (br d, J = 8.0 Hz, 1H), 7.28-7.25 (m, 2H), 6.91 (s, 1H), 6.87 (d, J = 8.6 Hz, 2H), 5.19-4.90 (m, 1H), 4.73 (s, 2H), 3.81 (s, 3H), 3.23 (s, 2H), 1.90-1.64 (m, 2H), 1.12-0.98 (m, 2H), 0.77-0.73 (m, 2H).
[0344] 6-[(1r,2r)-1,2-difluorocyclopropyl]-2-[(4-methoxyphenyl)methyl]spiro[3H-isoquinoline-4,1'- cyclopropane]-1-one (Int.54):1H NMR (400 MHz, CDCl3): δ 8.18 (d, J = 7.6 Hz, 1H), 7.25 (d, J = 8.6 Hz, 2H), 6.94 (d, J = 8.1 Hz, 1H), 6.87 (d, J = 8.7 Hz, 2H), 6.82 (d, J = 1.5 Hz, 1H), 4.72 (s, 2H), 4.67- 4.45 (m, 1H), 3.81 (s, 3H), 3.22 (s, 2H), 1.99-1.79 (m, 1H), 1.63-1.50 (m, 1H), 1.08-1.01 (m, 2H), 0.81- 0.68 (m, 2H). Intermediate 55
[0345] tert-butyl N-tert-butoxycarbonyl-N-(5-cyclobutylpyrimidin-2-yl)carbamate: A solution of tert-butyl N-(5-bromopyrimidin-2-yl)-N-tert-butoxycarbonyl-carbamate (500 mg, 1.34 mmol), potassium cyclobutyltrifluoroboranuide (325 mg, 2.00 mmol), Na2CO3(283 mg, 2.67 mmol), 4,4'-di-tert-butyl-2,2'- bipyridine (18 mg, 0.07 mmol), bis[3,5-difluoro-2-[5-(trifluoromethyl)-2-pyridyl]phenyl]iridium(1+);2- (2-pyridyl)pyridine hexafluorophosphate (13.5 mg, 0.013 mmol), and dichloro(1,2- dimethoxyethane)nickel (15 mg, 0.067 mmol) in DMA (10 mL) was stirred for 16 h under a 34W blue light. The reaction mixture was poured into aq. sat. NH4Cl (30 mL) and extracted with EtOAc (3 × 10 mL). The combined organic layers were washed with brine (10 mL), dried over anhydrous Na2SO4, filtered, concentrated under reduced pressure, and purified by silica gel column chromatography. LCMS: m / z = 350.2 [M+H]+.
[0346] 5-cyclobutylpyrimidin-2-amine hydrochloride 9 (Int.55): A solution of tert-butyl N-tert- butoxycarbonyl-N-(5-cyclobutylpyrimidin-2-yl)carbamate (100 mg, 0.29 mmol) in HCl (4M in EtOAc,10 mL) was stirred for 16 h. The reaction mixture was concentrated under reduced pressure to provide a residue that was used directly. LCMS: m / z = 150.2 [M+H]+. Intermediate 56
[0347] 5-(1-methylpyrazol-4-yl)pyrimidin-2-amine: To a solution of 5-bromopyrimidin-2-amine (500 mg, 2.87 mmol) and 1-methyl-4-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-1H-pyrazole (658 mg, 3.16 mmol) in 1,4-dioxane (5 mL) and H2O (1 mL) were added Pd(dppf)Cl2(421 mg, 0.57 mmol) and K2CO3(993 mg, 7.18 mmol). The reaction mixture was stirred at 80 °C for 3 h. The reaction mixture was poured into H2O (10 mL) and extracted with DCM (4 × 10 mL). The combined organic layers were washed with brine (10 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by preparative silica gel thin-layer chromatography. LCMS: m / z = 176.1 [M+H]+. Intermediate 57
[0348] 5-(2,5-dihydrofuran-3-yl)pyrimidin-2-amine: To a solution of 5-iodopyrimidin-2-amine (500 mg, 2.26 mmol) and 2-(2,5-dihydrofuran-3-yl)-4,4,5,5-tetramethyl-1,3,2-dioxaborolane (444 mg, 2.26 mmol) in 1,4-dioxane (5 mL) and H2O (0.5 mL) were added K2CO3(625 mg, 4.52 mmol) and Pd(dppf)Cl2(82 mg, 0.11 mmol). The mixture was stirred at 90 °C for 16 h. The reaction mixture was filtered then quenched by addition of H2O (10 mL) at 20 °C. The mixture was extracted with DCM:MeOH (10:1, 6 × 5 mL). The combined organic layers were washed with brine (15 mL), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure. The residue was purified by silica gel column chromatography. LCMS: m / z = 164.0 [M+H]+.
[0349] 5-tetrahydrofuran-3-ylpyrimidin-2-amine (Int.57): To a solution of 5-(2,5-dihydrofuran-3- yl)pyrimidin-2-amine (230 mg, 1.41 mmol) in MeOH (4.5 mL), THF (4.5 mL) and EtOAc (4.5 mL) was added Pd / C (200 mg, 10% purity) under H2. The mixture was stirred at 20 °C for 5 h. The reaction mixture was filtered and concentrated under reduced pressure to provide a residue that was used directly. LCMS: m / z = 166.0 [M+H]+. Intermediate 58
[0350] 2-(6-bromo-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)acetamide: To a solution of 2-(6-bromo-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)acetic acid (2 g, 6.45 mmol, Int.3),NH4Cl (690 mg, 12.90 mmol), HOBt (1.05 g, 7.74 mmol) in DCM (20 mL) were added EDCI (1.48 g, 7.74 mmol) and DIPEA (1.67 g, 12.90 mmol). The mixture was stirred at 20 °C for 16 h. The mixture was added to H2O (30 mL) and extracted with DCM (3 × 20 mL). The combined organics were washed with brine (20 mL), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure. The crude product were triturated with MTBE at 25 °C for 30 min to provide a residue that was used directly. LCMS: m / z = 309.0, 311.0 [M+H]+. Intermediate 59
[0351] 4-amino-3-fluoro-benzonitrile: To a solution of 5-bromo-3-fluoropyridin-2-amine (300 mg, 1.57 mmol), K4[Fe(CN)6] (231 mg, 0.63 mmol), and Pd(PPh3)4(91 mg, 0.08 mmol) in t-BuOH (3 mL) and water (3 mL) was added DBU (60 mg, 0.4 mmol). The reaction mixture was stirred at 85 °C for 12 h and then at 120 °C for 3 h. The reaction mixture was poured into H2O (5 mL) and extracted with EtOAc (3 × 5 mL). The combined organic layers were washed with brine (5 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography.1H NMR (400 MHz, CDCl3): δ 8.19 (s, 1H), 7.41 (dd, J = 2.0, 10.4 Hz, 1H), 5.19 (br s, 2H). Intermediate 60
[0352] methyl 4-bromo-2-(1-cyano-2-methoxy-2-oxoethyl)benzoate: To a solution of methyl 4- bromo-2-fluorobenzoate (50 g, 214 mmol) and Cs2CO3(140 g, 429 mmol) in DMF (800 mL) was added methyl 2-cyanoacetate (25.5 g, 257 mmol). The mixture was stirred at 90 °C for 16 h. The reaction mixture was poured into H2O (1.5 L) at 0 °C, and extracted with EtOAc (3 × 500 mL). The combined organic layers were washed with aq. sat. NaHCO3(3 × 200 mL). The combined organic layers were washed with brine (200 mL), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure. The residue was purified by silica gel column chromatography.
[0353] methyl 6-bromo-1-oxo-3,4-dihydro-2H-isoquinoline-4-carboxylate (Int.60): To a solution of methyl 4-bromo-2-(1-cyano-2-methoxy-2-oxoethyl)benzoate (10 g, 32 mmol) in MeOH (420 mL) and H2O (4.2 mL) at 0 °C was added CoCl2(4.16 g, 32 mmol) and NaBH4(4.85 g, 128 mmol). The mixture was stirred at 0 °C for 3 h. The reaction mixture was quenched with HCl (3M) to pH = 3 and concentrated under reduced pressure. The mixture was extracted with EtOAc (3 × 300 mL). The combined organic layers were washed with brine (400 mL) dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure. The residue was purified by silica gel column chromatography. LCMS: m / z = 284.0, 286.0 [M+H]+.Intermediate 61
[0354] To a solution of 6-bromo-5-fluoro-spiro[2,3-dihydroisoquinoline-4,1'-cyclopropane]-1-one (5.3 g, 19.6 mmol) and 1-(chloromethyl)-4-methoxy-benzene (3.69 g, 23.6 mmol) in THF (50 mL) at 0 °C was added NaH (1.57 g, 39.2 mmol, 60% purity). The mixture was stirred at 50 °C for 20 h. The reaction mixture was poured into H2O (50 mL) and extracted with EtOAc (3 × 20 mL). The combined organic layers were washed with brine (20 mL), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure. The residue was purified by silica gel column chromatography. LCMS: m / z = 390.0, 392.0 [M+H]+. Intermediate 62 and 63
[0355] 5'-fluoro-2'-(4-methoxybenzyl)-6'-vinyl-2',3'-dihydro-1'H-spiro[cyclopropane-1,4'- isoquinolin]-1'-one: To a solution of 6'-bromo-5'-fluoro-2'-(4-methoxybenzyl)-2',3'-dihydro-1'H- spiro[cyclopropane-1,4'-isoquinolin]-1'-one (4.0 g, 10.2 mmol, Int.61) and potassium vinyltrifluoroborate (1.37 g, 10.2 mmol) in 1,4-dioxane (40 mL) and H2O (10 mL) were added Pd(dppf)Cl2 (750 mg, 1.02 mmol) and CsF (3.11 g, 20.5 mmol). The mixture was stirred at 100 °C for 12 h. The reaction mixture was poured into H2O (80 mL) and extracted with EtOAc (3 × 40 mL). The combined organic layers were dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography. LCMS: m / z = 338.2 [M+H]+.
[0356] 6'-(2-bromo-2-fluorocyclopropyl)-5'-fluoro-2'-(4-methoxybenzyl)-2',3'-dihydro-1'H- spiro[cyclopropane-1,4'-isoquinolin]-1'-one: To a solution of 5'-fluoro-2'-(4-methoxybenzyl)-6'-vinyl- 2',3'-dihydro-1'H-spiro[cyclopropane-1,4'-isoquinolin]-1'-one (2.7 g, 8.0 mmol) in DCM (15 mL) at 0 °C were added aq. NaOH (28.8 g, 360 mmol, 50 % (w / w)), dibromo(fluoro)methane (7.68 g, 40.0 mmol), and benzyltriethylammonium chloride (183 mg, 0.80 mmol). The mixture was stirred at 0 °C for 0.5 h, then stirred at 20 °C for 12 h. The reaction mixture was poured into ice-cold H2O (40 mL) and extracted with EtOAc (2 × 20 mL). The combined organic layers were dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography. LCMS: m / z = 448.0, 450.1 [M+H]+.
[0357] 5'-fluoro-6'-(2-fluorocyclopropyl)-2'-(4-methoxybenzyl)-2',3'-dihydro-1'H- spiro[cyclopropane-1,4'-isoquinolin]-1'-one: To a solution of 6'-(2-bromo-2-fluorocyclopropyl)-5'- fluoro-2'-(4-methoxybenzyl)-2',3'-dihydro-1'H-spiro[cyclopropane-1,4'-isoquinolin]-1'-one (2.4 g, 5.35mmol) in tributylstannane (26.4 g, 90.7 mmol) at 20 °C was added AIBN (88 mg, 0.54 mmol). The mixture was stirred at 80 °C for 3 h. The reaction mixture was poured into aq. sat. KF (40 mL), stirred for 1 h at 20 °C, and extracted with EtOAc (4 × 30 mL). The combined organic layers were washed with brine (10 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography. LCMS: m / z = 370.1 [M+H]+.
[0358] 5'-fluoro-6'-(2-fluorocyclopropyl)-2',3'-dihydro-1'H-spiro[cyclopropane-1,4'-isoquinolin]- 1'-one: 5'-fluoro-6'-(2-fluorocyclopropyl)-2'-(4-methoxybenzyl)-2',3'-dihydro-1'H-spiro[cyclopropane- 1,4'-isoquinolin]-1'-one (1.4 g, 3.79 mmol) was added to TFA (15 mL) at 20 °C and the mixture was stirred at 60 °C for 5 h. The reaction mixture was poured into H2O (10 mL) and the aqueous layer was adjusted to pH = 8 with aq. sat. NaHCO3. The mixture was extracted with EtOAc (3 × 20 mL). The combined organic layers were dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography. LCMS: m / z = 250.1 [M+H]+.
[0359] methyl 2-(5'-fluoro-6'-(2-fluorocyclopropyl)-1'-oxo-1'H-spiro[cyclopropane-1,4'- isoquinolin]-2'(3'H)-yl)acetate: To a solution of 5'-fluoro-6'-(2-fluorocyclopropyl)-2',3'-dihydro-1'H- spiro[cyclopropane-1,4'-isoquinolin]-1'-one (200 mg, 0.80 mmol) in DMF (3.0 mL) at 0 °C was added NaH (48 mg, 1.20 mmol, 60% purity). The mixture was stirred for 15 min and methyl 2-bromoacetate (245 mg, 1.60 mmol) was added. The mixture was stirred at 25 °C for 2 h. The reaction mixture was quenched by addition aq. sat. NH4Cl (10 mL) and extracted with EtOAc (3 × 10 mL). The combined organic layers were dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography. LCMS: m / z = 322.2 [M+H]+.
[0360] 2-(5'-fluoro-6'-((1r,2r)-2-fluorocyclopropyl)-1'-oxo-1'H-spiro[cyclopropane-1,4'-isoquinolin]- 2'(3'H)-yl)-N-(5-fluoropyrimidin-2-yl)acetamide and 2-(5'-fluoro-6'-((1s,2r)-2-fluorocyclopropyl)-1'-oxo- 1'H-spiro[cyclopropane-1,4'-isoquinolin]-2'(3'H)-yl)-N-(5-fluoropyrimidin-2-yl)acetamide: To a solution of methyl 2-(5'-fluoro-6'-(2-fluorocyclopropyl)-1'-oxo-1'H-spiro[cyclopropane-1,4'-isoquinolin]-2'(3'H)- yl)acetate (100 mg, 0.31 mmol) and 5-fluoropyrimidin-2-amine (70 mg, 0.62 mmol) in DCE (3.0 mL) at 25 °C was added AlMe3(1 M in n-heptane, 0.62 mmol). The mixture was stirred at 90 °C for 3 h. The mixture was diluted with H2O (30 mL) and extracted with DCM (3 × 10 mL). The combined organic layers were dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by reverse-phase preparative HPLC to provide:
[0361] 2-(5'-fluoro-6'-((1r,2r)-2-fluorocyclopropyl)-1'-oxo-1'H-spiro[cyclopropane-1,4'-isoquinolin]- 2'(3'H)-yl)-N-(5-fluoropyrimidin-2-yl)acetamide (Int.62)
[0362] LCMS: m / z = 403.0 [M+H]+.1H NMR (400 MHz, CDCl3): δ 9.06 (br s, 1H), 8.48 (s, 2H), 7.94 (d, J = 8.0 Hz, 1H), 7.15 (t, J = 7.2 Hz, 1H), 5.00-4.73 (m, 1H), 4.60-4.47 (m, 2H), 3.54-3.36 (m, 2H), 2.26-2.06 (m, 1H), 1.64-1.58 (m, 2H), 1.41-1.23 (m, 2H), 1.06-0.91 (m, 2H).
[0363] 2-(5'-fluoro-6'-((1s,2r)-2-fluorocyclopropyl)-1'-oxo-1'H-spiro[cyclopropane-1,4'-isoquinolin]- 2'(3'H)-yl)-N-(5-fluoropyrimidin-2-yl)acetamide (Int.63). LCMS: m / z = 403.0 [M+H]+.1H NMR (400 MHz, CDCl3): δ 9.06-8.89 (m, 1H), 8.48 (s, 2H), 7.90 (d, J = 8.0 Hz, 1H), 6.80-6.68 (m, 1H), 4.79-4.59(m, 1H), 4.55 (br s, 2H), 3.44 (s, 2H), 2.63-2.44 (m, 1H), 1.67-1.55 (m, 3H), 1.22-1.12 (m, 1H), 1.00 (s, 2H). Intermediate 64
[0364] 2-chloro-5-vinylpyrimidine: To a solution of 2-chloro-5-iodo-pyrimidine (2.0 g, 8.32 mmol) and potassium trifluorovinylborate (1.11 g, 8.32 mmol) in 1,4-dioxane (40 mL) at 15 °C were added CsF (2.53 g, 16.64 mmol) and Pd(dppf)Cl2(609 mg, 0.83 mmol). The mixture was heated to 80 °C and stirred for 5 h. The mixture was diluted with H2O (60 mL) and extracted with EtOAc (3 × 20 mL). The combined organic layers were washed with brine (30 mL), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure. The residue was purified by silica gel column chromatography. LCMS: m / z = 141.1, 143.0 [M+H]+.
[0365] 2-chloro-5-(2,2-difluorocyclopropyl)pyrimidine: To a solution of 2-chloro-5-vinyl-pyrimidine (300 mg, 2.13 mmol) and NaI (96 mg, 0.64 mmol) in THF (3.0 mL) at 80 °C was added TMSCF3(1.52 g, 10.7 mmol). The mixture was stirred for 1 h at 80 °C. The mixture was diluted with H2O (10 mL) and extracted with EtOAc (3 × 3 mL). The combined organic layers were washed with brine (3 mL), dried over anhydrous Na2SO4, filtered, and concentrate under reduced pressure. The residue was purified by silica gel column chromatography. LCMS: m / z = 191.0, 193.0 [M+H]+.
[0366] 5-(2,2-difluorocyclopropyl)pyrimidin-2-amine: To a solution of 2-chloro-5-(2,2- difluorocyclopropyl)pyrimidine (30 mg, 0.16 mmol) in 1,4-dioxane (0.5 mL) at 20 °C was added NH4OH (0.5 mL). The mixture was heated to 65 °C and stirred for 2 h. The mixture was concentrated under reduced pressure to provide a residue that was used directly. LCMS: m / z = 172.1 [M+H]+. Intermediate 65
[0367] 2-bromo-5-(methoxymethoxy)pyrimidine: To a solution of 2-bromopyrimidin-5-ol (5.0 g, 28.6 mmol) in THF (50 mL) at 0 °C were added Et3N (3.47 g, 34.3 mmol) and MOMCl (2.5 g, 31.4 mmol). The reaction mixture was quenched by addition aq. HCl (1M, 50 mL) and extracted with EtOAc (3 × 20 mL). The combined organic layers were washed with aq. NaOH (1M, 15 mL) and brine (3 × 20 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure to provide a residue. The residue was purified by silica gel column chromatography. LCMS: m / z = 219.0, 221.0 [M+H]+.Intermediate 66
[0368] methyl 4-bromo-2-(1-cyano-2,2-difluorocyclopropyl)-3-fluorobenzoate: To a solution of methyl 4-bromo-2-(1-cyanovinyl)-3-fluorobenzoate (450 mg, 1.58 mmol, Int.36) in 1,4-dioxane (2.0 mL) was added sodium 2-chloro-2,2-difluoroacetate (725 mg, 4.75 mmol). The mixture was stirred at 150 °C for 20 min under microwave irradiation. The reaction mixture was poured into H2O (20 mL) and extracted with EtOAc (4 × 15 mL). The combined organic layers were washed with brine (2 × 10 mL), dried over anhydrous Na2SO4, filtered, concentrated under reduced pressure, and purified by reverse- phase preparative HPLC. LCMS: m / z = 333.9, 335.9 [M+H]+.
[0369] 6'-bromo-2,2,5'-trifluoro-2',3'-dihydro-1'H-spiro[cyclopropane-1,4'-isoquinolin]-1'-one: To a mixture of methyl 4-bromo-2-(1-cyano-2,2-difluorocyclopropyl)-3-fluorobenzoate (600 mg, 1.80 mmol) and CoCl2(233 mg, 1.80 mmol) in MeOH (12 mL) and H2O (1.2 mL) at -10 °C was added NaBH4(204 mg, 5.39 mmol). The mixture was stirred at 0 °C for 1 h and then -10 °C for a further 4 h. The reaction mixture was diluted with sat. aq. NH4Cl (20 mL) and extracted with EtOAc (4 × 15 mL). The combined organic layers were washed with brine (2 × 10 mL), dried over anhydrous Na2SO4, filtered, concentrated under reduced pressure, and purified by silica gel column chromatography. LCMS: m / z = 306.0, 308.0 [M+H]+.
[0370] methyl 2-(6'-bromo-2,2,5'-trifluoro-1'-oxo-1'H-spiro[cyclopropane-1,4'-isoquinolin]- 2'(3'H)-yl)acetate: To a solution of methyl 2-bromoacetate (82 mg, 0.54 mmol) in DMF (1.5 mL) were added 6'-bromo-2,2,5'-trifluoro-2',3'-dihydro-1'H-spiro[cyclopropane-1,4'-isoquinolin]-1'-one (110 mg, 0.36 mmol), Cs2CO3 (234 mg, 0.72 mmol), and NaI (27 mg, 0.18 mmol). The mixture was stirred at 20 °C for 2 h. The reaction mixture was cooled to 0 °C, diluted with H2O (10 mL), and extracted with EtOAc (4 × 5 mL). The combined organic layers were washed with brine (10 mL), dried over anhydrous Na2SO4, filtered, concentrated under reduced pressure, and purified by silica gel column chromatography. LCMS: m / z = 378.0, 380.0 [M+H]+. Intermediate 67
[0371] 2-(6'-bromo-2,2,5'-trifluoro-1'-oxo-1'H-spiro[cyclopropane-1,4'-isoquinolin]-2'(3'H)- yl)acetic acid: To a solution of methyl 2-(6'-bromo-2,2,5'-trifluoro-1'-oxo-1'H-spiro[cyclopropane-1,4'- isoquinolin]-2'(3'H)-yl)acetate (115 mg, 0.30 mmol, Int.66) in THF (3.0 mL) and H2O (0.6 mL) was added LiOH•H2O (26 mg, 0.61 mmol). The mixture was stirred at 20 °C for 1 h. The reaction mixture was poured into H2O (10 mL) and washed with MTBE (3 × 5 mL). The aqueous layer was adjusted to pH = 3 with aq. HCl (3 M) at 0 °C and extracted with EtOAc (3 × 10 mL). The combined organic layerswere washed with brine (10 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure to provide a residue that was used directly. LCMS: m / z = 361.9, 363.9 [M-H]-. Example 1 2-(6-bromo-4-ethyl-1-oxo-3,4-dihydroisoquinolin-2(1H)-yl)-N-(5-fluoropyrimidin-4-yl)acetamide
[0372] Methyl 4-bromo-2-(1-cyanopropyl)benzoate: To a solution of methyl 4-bromo-2- (cyanomethyl)benzoate (500 mg, 1.97 mmol) in THF (8 mL) was added NaHMDS (2.16 mmol, 1 M in THF) dropwise at -78 °C. The reaction mixture was stirred at -78 °C for 0.5 h before the addition of a solution of iodoethane (307 mg, 1.97 mmol) in THF (2 mL). The reaction mixture was stirred at -78 °C for a further 1 h and then stirred at 25 °C for 2 h. The reaction mixture was poured into 1 M aqueous HCl (20 mL) and extracted with EtOAc (3 × 8 mL). The combined organic layers were washed with brine (5 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography. LCMS: m / z = 282.0, 283.9 [M+H]+.
[0373] 6-Bromo-4-ethyl-3,4-dihydroisoquinolin-1(2H)-one: To a mixture of methyl 4-bromo-2-(1- cyanopropyl)benzoate (200 mg, 0.71 mmol) and dichlorocobalt (184 mg, 1.42 mmol) in MeOH (4 mL) was added NaBH4(134 mg, 3.54 mmol) at 0 °C. The reaction mixture was stirred at 50 °C for 6 h. The reaction mixture was poured into water (10 mL) and extracted with EtOAc (3 × 5 mL). The combined organic layers were washed with brine (5 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography. LCMS: m / z = 253.9, 255.9 [M+H]+.
[0374] 2-(6-bromo-4-ethyl-1-oxo-3,4-dihydroisoquinolin-2(1H)-yl)acetic acid: To a solution of 6- bromo-4-ethyl-3,4-dihydroisoquinolin-1(2H)-one (120 mg, 0.47 mmol) in THF (3 mL) was added NaH (20 mg, 0.52 mmol, 60% purity) at 0 °C. The reaction mixture was stirred at 0 °C for 0.5 h before the addition of methyl 2-bromoacetate (79 mg, 0.52 mmol). The reaction mixture was stirred at 25 °C for a further 2 h. The reaction mixture was poured into water (10 mL). The pH was adjusted to pH = 3 using aqueous 3 N HCl and then the mixture was extracted with EtOAc (3 x 10 mL). The combined organic layers were dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure to provide a residue that was used directly. LCMS: m / z = 311.9, 313.9 [M+H]+.
[0375] Methyl 2-(6-bromo-4-ethyl-1-oxo-3,4-dihydroisoquinolin-2(1H)-yl)acetate: To a solution of 2-(6-bromo-4-ethyl-1-oxo-3,4-dihydroisoquinolin-2(1H)-yl)acetic acid (130 mg, 0.42 mmol) in MeOH (1 mL) was added SOCl2 (99 mg, 0.83 mmol) at 0 °C. The reaction mixture was stirred at 60 °C for 1 h. Thereaction mixture was concentrated under reduced pressure. The residue was resuspended in MTBE (5 mL) and adjusted to pH = 7 with sat. aqueous NaHCO3. The layers were separated and the aqueous phase was extracted with MTBE (2 × 5 mL). The combined organic layers were washed with brine (5 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure to provide a residue that was used directly.
[0376] 2-(6-bromo-4-ethyl-1-oxo-3,4-dihydroisoquinolin-2(1H)-yl)-N-(5-fluoropyrimidin-4- yl)acetamide: To a solution of methyl 2-(6-bromo-4-ethyl-1-oxo-3,4-dihydroisoquinolin-2(1H)- yl)acetate (70 mg, 0.21 mmol) in toluene (1 mL) and THF (1 mL) were added 5-fluoropyrimidin-4-amine (48 mg, 0.43 mmol) and AlMe3 (0.64 mmol, 2 M in toluene) at 25 °C. The reaction mixture was stirred at 90 °C for 4 h. The reaction mixture was poured into water (5 mL) and filtered. The filtrate was extracted with EtOAc (4 × 5 mL). The combined organic layers were dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The crude residue was purified by reverse-phase HPLC. LCMS: m / z = 407.0, 409.0 [M+H]+.1H NMR (400 MHz, CDCl3): δ 8.82-8.69 (m, 1H), 8.49 (d, J = 2.4 Hz, 1H), 7.97 (d, J = 8.4 Hz, 1H), 7.52 (dd, J = 1.6, 8.4 Hz, 1H), 7.39 (d, J = 1.6 Hz, 1H), 4.74-4.48 (m, 2H), 3.99 (dd, J = 4.4, 12.4 Hz, 1H), 3.54 (dd, J = 3.6, 12.4 Hz, 1H), 2.82 (m, 1H), 1.81-1.71 (m, 2H), 1.00 (t, J = 7.6 Hz, 3H). Example 2 2-(6-bromo-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)-N-(5-fluoropyrimidin-2- yl)acetamide (2)
[0377] To a mixture of 5-fluoropyrimidin-2-amine (49 mg, 0.43 mmol) and methyl 2-(6-bromo-1-oxo- spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)acetate (70 mg, 0.22 mmol) in toluene (2 mL) and THF (2 mL) was added dropwise AlMe3 (0.30 mL, 2 M in toluene) at 20 °C. The reaction mixture was stirred for 3 h at 90 °C. The reaction mixture was poured into ice-cold H2O (10 mL) and extracted with EtOAc (4 × 5 mL). The combined organic layers were washed with brine (2 × 10 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The crude residue was purified by reverse- phase HPLC. LCMS: m / z = 405.0, 407.0 [M+H]+.1H NMR (400 MHz, CDCl3): δ 9.06 (br s, 1H), 8.49 (s, 2H), 8.02 (d, J = 8.4 Hz, 1H), 7.46 (dd, J = 1.6, 8.4 Hz, 1H), 7.01 (d, J = 1.6 Hz, 1H), 4.64-4.49 (m, 2H), 3.54 (s, 2H), 1.17-1.11 (m, 2H), 1.10-1.05 (m, 2H).
[0378] The following compounds as shown in Table 1 were, or can be, made via similar procedures as those described above.Example 13 2-(6-bromo-1-oxospiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)-N-[3-(trifluoromethyl)-1- bicyclo[1.1.1]pentanyl]acetamide (13)
[0379] To a solution of 2-(6-bromo-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)acetic acid (35 mg, 0.11 mmol) in DMF (1.4 mL) were added 3-(trifluoromethyl)bicyclo[1.1.1]pentan-1-amine HCl salt (29 mg, 0.16 mmol), DIPEA (43 mg, 0.34 mmol), and T3P (93 mg, 0.15 mmol, 50% in DMF). The reaction mixture was stirred at 25 °C for 1 h. The reaction mixture was purified directly by reverse-phase HPLC. LCMS: m / z = 443.3, 445.4 [M+H]+.1H NMR (400 MHz, DMSO-d6): δ 8.83 (s, 1H), 7.80 (d, J = 8.3 Hz, 1H), 7.52 (dd, J = 8.3, 1.9 Hz, 1H), 7.24 (d, J = 1.9 Hz, 1H), 4.08 (s, 2H), 3.44 (s, 2H), 2.25-2.20 (m, 6H), 1.15-1.12 (m, 2H), 1.04-1.01 (m, 2H).
[0380] The following compounds as shown in Table 1 were, or can be, made via similar procedures as those described above.Example 26 (R)-2-(6-bromo-4,4-dimethyl-1-oxo-3,4-dihydroisoquinolin-2(1H)-yl)-N-(1-cyclobutylpiperidin-3- yl)acetamide (26)
[0381] tert-Butyl N-[(3R)-1-cyclobutyl-3-piperidyl]carbamate: To a solution of tert-butyl N-[(3R)-3- piperidyl]carbamate (10.0 g, 49.9 mmol) and cyclobutanone (7.0 g, 99.9 mmol) in methanol (100 mL) was added sodium cyanoborohydride (5.33 g, 84.9 mmol) and acetic acid (5.71 mL, 99.9 mmol). The reaction mixture was stirred at 23 °C for 18 h. The reaction mixture was concentrated under reduced pressure. The residue was taken up in EtOAc (100 mL) and the organics were washed with water (2 x 50 mL) and brine (50 mL). The organic layer was dried over anhydrous MgSO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography. LCMS: m / z = 255.2 [M+H]+.
[0382] (3R)-1-cyclobutylpiperidin-3-amine HCl salt: tert-Butyl N-[(3R)-1-cyclobutyl-3- piperidyl]carbamate (6.5 g, 25.6 mmol) was dissolved in HCl (63.9 mL, 4 N in 1,4-dioxane). The reaction mixture was stirred at 23 °C for 3 h. The reaction mixture was concentrated under reduced pressure to provide a residue that was used directly. LCMS: m / z = 155.1 [M+H]+.
[0383] 2-chloro-N-[(3R)-1-cyclobutyl-3-piperidyl]acetamide: To a solution of (3R)-1- cyclobutylpiperidin-3-amine HCl salt (5.7 g, 29.9 mmol) and N-methylmorpholine (13.2 mL, 119.6 mmol) in DMF (10 mL) and DCM (50 mL) was added a solution of 2-chloroacetyl chloride (2.38 mL, 29.9 mmol) in DCM (10 mL) at -78oC. The reaction mixture was stirred at 23 °C for 3 h. The reaction mixture was concentrated under reduced pressure. The residue was purified by silica gel column chromatography. LCMS: m / z = 231.2 [M+H]+.
[0384] (R)-2-(6-bromo-4,4-dimethyl-1-oxo-3,4-dihydroisoquinolin-2(1H)-yl)-N-(1- cyclobutylpiperidin-3-yl)acetamide: To a solution of 2-chloro-N-[(3R)-1-cyclobutyl-3- piperidyl]acetamide (75 mg, 0.33 mmol) and 6-bromo-4,4-dimethyl-2,3-dihydroisoquinolin-1-one (64 mg, 0.25 mmol) in MeCN (1.0 mL) was added Cs2CO3 (205 mg, 0.63 mmol). The reaction mixture was stirred at 80oC for 3 h. The reaction mixture was cooled to 23 °C, poured into ice-cold water, and extracted with EtOAc (4 x 10 mL). The combined organic layers were dried over anhydrous MgSO4, filtered, and concentrated under reduced pressure. The residue was purified by reverse-phase HPLC. LCMS: m / z = 448.5, 450.5 [M+H]+.1H NMR (400 MHz, CDCl3): δ 8.39 (s, 1H), 7.93-7.90 (m, 1H),7.44-7.41 (m, 2H), 4.39-4.37 (m, 1H), 4.31-4.21 (m, 2H), 3.42 (q, J = 10.4 Hz, 2H), 3.26-3.15 (m, 3H), 2.71-2.66 (m, 1H), 2.55-2.45 (m, 2H), 2.42-2.32 (m, 1H), 2.25-2.12 (m, 3H), 1.93-1.86 (m, 2H), 1.81- 1.63 (m, 3H), 1.33 (d, J = 2.5 Hz, 6H). Example 27 2-[1-oxo-6-(trifluoromethyl)spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl]-N-pyrimidin-2-yl- acetamide (27)
[0385] To a solution of pyrimidin-2-amine (91 mg, 0.96 mmol) and methyl 2-[1-oxo-6- (trifluoromethyl)spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl]acetate (100 mg, 0.32 mmol) in THF (3.0 mL) and toluene (1.0 mL) was added AlMe3 (0.48 mL, 2 M in toluene). The reaction mixture was stirred at 90 °C for 4 h. The reaction mixture was diluted with water (2 mL) and extracted with EtOAc (2 × 5 mL). The combined organics were dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by reverse-phase HPLC. LCMS: m / z = 377.0 [M+H]+.1H NMR (400 MHz, DMSO-d6): δ 10.83 (s, 1H), 8.67 (d, J = 5.2 Hz, 2H), 8.09 (d, J = 8.0 Hz, 1H), 7.68 (d, J = 8.0 Hz, 1H), 7.37 (s, 1H), 7.19 (t, J = 5.2 Hz, 1H), 4.60 (s, 2H), 3.54 (s, 2H), 1.26-1.20 (m, 2H), 1.13- 1.07 (m, 2H). Example 28 2-[1-oxo-6-(trifluoromethyl)spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl]-N-(5-fluoropyrimidin- 2-yl-acetamide (28)
[0386] To a mixture of methyl 2-[1-oxo-6-(trifluoromethyl)spiro[3H-isoquinoline-4,1'-cyclopropane]-2- yl]acetate (50 mg, 0.16 mmol) and 5-fluoropyrimidin-2-amine (20 mg, 0.18 mmol) in toluene (1.0 mL) was added bis(trimethylaluminum)-1,4-diazabicyclo[2.2.2]-octane (41 mg, 0.16 mmol). The reaction mixture was stirred at 120 °C for 8 h. The reaction mixture was cooled to ambient temperature, diluted with water (2 mL) and EtOAc (2 mL), and filtered. The filtrate was extracted with EtOAc (3 × 2 mL). The combined organics were washed with brine (5 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduce pressure. The residue was purified by reverse-phase HPLC. LCMS: m / z = 395.1 [M+H]+.1H NMR (400 MHz, DMSO-d6) δ 10.99 (s, 1H), 8.77 (s, 2H), 8.10 (d, J = 8.0 Hz, 1H), 7.69 (d, J = 8.0 Hz, 1H), 7.38 (s, 1H), 4.54 (s, 2H), 3.54 (s, 2H), 1.25-1.22 (m, 2H), 1.12-1.09 (m, 2H).
[0387] The following compounds as shown in Table 1 were, or can be, made via similar procedures as those described above.Example 32 2-(6-bromo-1-oxo-spiro[3H-isoquinoline-4,1'-cyclobutane]-2-yl)-N-pyrimidin-2-yl-acetamide (32)
[0388] To a solution of methyl 2-(6-bromo-1-oxospiro[3H-isoquinoline-4,1'-cyclobutane]-2-yl)acetate and pyrimidin-2-amine (23 mg, 0.23 mmol) in toluene (0.8 mL) and THF (0.8 mL) was added AlMe3 (0.24 mL, 2 M in toluene,). The reaction mixture was stirred at 50 °C for 12 h before another portion ofAlMe3(0.24 mL, 2 M in toluene) was added. The reaction mixture was stirred at 90 °C for a further 4 h. The reaction mixture was cooled to ambient temperature, diluted with water (20 mL), and extracted with EtOAc (3 × 20 mL). The combined organic layers were washed with brine (20 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by reverse-phase HPLC. LCMS: m / z = 401.1, 403.1 [M+H]+.1H NMR (400 MHz, CDCl3): δ 8.84 (br s, 1H), 8.62 (d, J = 4.8 Hz, 2H), 7.99 (d, J = 8.4 Hz, 1H), 7.66 (d, J = 1.6 Hz, 1H) 7.51-7.49 (m, 1H), 7.03 (t, J = 4.8 Hz, 1H), 4.74 (s, 2H), 3.78 (s, 2H), 2.36-2.31 (m, 2H), 2.24-2.20 (m, 2H), 2.09-2.07 (m, 2H).
[0389] The following compounds as shown in Table 1 were, or can be, made via similar procedures as those described above.Examples 39 and 40 2-(6-bromo-5-fluoro-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)-N-(pyrimidin-2- yl)acetamide (39) and 2-(5-fluoro-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)-N- (pyrimidin-2-yl)acetamide (40):
[0390] To a mixture of methyl 2-(6-bromo-5-fluoro-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2- yl)acetate and methyl 2-(5-fluoro-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)acetate (230 mg, 0.67 mmol, 1:3 ratio) and pyrimidin-2-amine (192 mg, 2.02 mmol) in toluene (3.0 mL) and THF (2.0 mL) was added and AlMe3(1.01 mL, 2 M in toluene). The reaction mixture was stirred at 100 °C for 5 h. The reaction mixture was cooled to ambient temperature, diluted with ice cold water (5 mL) and extracted with EtOAc (3 × 5 mL). The combined organics were washed with brine (20 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by reverse-phase HPLC to provide:
[0391] 2-(6-bromo-5-fluoro-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)-N-(pyrimidin-2- yl)acetamide (39). LCMS: m / z = 404.9, 406.9 [M+H]+.1H NMR (400 MHz, CDCl3): δ 9.26-9.11 (m, 1H), 8.63 (d, J = 4.8 Hz, 2H), 7.87 (d, J = 8.4 Hz, 1H), 7.51-7.45 (m, 1H), 7.03 (t, J = 4.8 Hz, 1H), 4.81- 4.66 (m, 2H), 3.51-3.41 (m, 2H), 1.65-1.61 (m, 2H), 1.08-1.00 (m, 2H).
[0392] 2-(5-fluoro-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)-N-(pyrimidin-2- yl)acetamide (40). LCMS: m / z = 327.0 [M+H]+.1H NMR (400 MHz, CDCl3): δ 9.32-9.22 (m, 1H), 8.63 (d, J = 4.8 Hz, 2H), 8.03-7.97 (m, 1H), 7.26-7.22 (m, 1H), 7.14-7.06 (m, 1H), 7.03 (t, J = 4.8 Hz, 1H), 4.72 (br s, 2H), 3.46 (s, 2H), 1.65-1.59 (m, 2H), 1.04-0.98 (m, 2H).Examples 41 and 42 2-(6-bromo-5-fluoro-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)-N-(5-fluoropyrimidin-2- yl)acetamide (41) and 2-(5-fluoro-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)-N-(5- fluoropyrimidin-2-yl)acetamide (42)
[0393] To a mixture methyl 2-(6-bromo-5-fluoro-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2- yl)acetate and methyl 2-(5-fluoro-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)acetate (400 mg, 1.17 mmol, 1:3 ratio) in toluene (3.0 mL) and THF (2.0 mL) were added 5-fluoropyrimidin-2-amine (397 mg, 3.51 mmol) and AlMe3(1.75 mL, 2 M in toluene). The reaction mixture was stirred at 100 °C for 3 h. The reaction mixture was cooled to ambient temperature, poured into ice cold water, and extracted with EtOAc (3 × 8 mL). The combined organics were washed with brine (20 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by reverse-phase HPLC to provide:
[0394] 2-(6-bromo-5-fluoro-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)-N-(5- fluoropyrimidin-2-yl)acetamide (41): LCMS: m / z = 423.1, 425.1 [M+H]+.1H NMR (400 MHz, DMSO- d6): δ 10.98 (br s, 1H), 8.76 (s, 2H), 7.72-7.64 (m, 2H), 4.50 (s, 2H), 3.45 (s, 2H), 1.51-1.44 (m, 2H), 1.11-1.05 (m, 2H).
[0395] 2-(5-fluoro-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)-N-(5-fluoropyrimidin-2- yl)acetamide (42): LCMS: m / z = 345.1 [M+H]+.1H NMR (400 MHz, DMSO-d6): δ 10.90-11.05 (br s, 1H), 8.76 (s, 2H), 7.76-7.81 (m, 1H), 7.27-7.38 (m, 2H), 4.41-4.60 (s, 2H), 3.44 (s, 2H), 1.40-1.46 (m, 2H), 1.05 (m, 2H). Example 43 2-(6-bromo-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)-N-(1H-indazol-6-yl)acetamide (43)
[0396] To a solution of 1H-indazol-6-amine (70.84 mg, 0.53 mmol) and 2-(6-bromo-1-oxo-spiro[3H- isoquinoline-4,1'-cyclopropane]-2-yl)acetic acid (150 mg, 0.48 mmol) in DMF (5.0 mL) were added HATU (276 mg, 0.73 mmol) and DIPEA (94 mg, 0.73 mmol). The reaction mixture was stirred at 25 °C for 4 h. The reaction mixture was diluted with water (30 mL) and extracted with EtOAc (3 × 20 mL). The combined organic layers were washed with brine (20 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by reverse-phase HPLC. LCMS: m / z = 425.0, 427.0 [M+H]+.1H NMR (400 MHz, DMSO-d6) δ 12.89 (br s, 1H), 10.27 (br s, 1H), 8.11 (s, 1H), 7.96 (s, 1H), 7.82 (d, J = 8.4 Hz, 1H), 7.66 (d, J = 8.8 Hz, 1H), 7.55-7.51 (m, 1H), 7.27 (d, J = 2.0 Hz, 1H), 7.11-7.07 (m, 1H), 4.36 (s, 2H), 3.54 (s, 2H), 1.20-1.14 (m, 2H), 1.10-1.03 (m, 2H).
[0397] The following compounds as shown in Table 1 were, or can be, made via similar procedures as those described above.Example 48 2-(6-bromo-1-oxospiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)-N-(5-pyrazol-1-ylpyrimidin-2- yl)acetamide (48)
[0398] 5-(1H-pyrazol-1-yl) pyrimidin-2-amine: To a solution of 5-bromopyrimidin-2-amine (0.30 g, 1.72 mmol) and 1H-pyrazole (98 mg, 1.44 mmol) in DMF (3.0 mL) were added (1S,2S)-N1,N2- dimethylcyclohexane-1,2-diamine (41 mg, 0.28 mmol), K2CO3 (298 mg, 2.16 mmol) and CuI (27 mg, 0.14 mmol). The reaction mixture was stirred at 120 °C for 2 h. The reaction mixture was cooled to 0 °C, diluted with water (10 mL), and extracted with EtOAc (4 × 10 mL). The combined organics were washedwith brine (10 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by preparatory TLC. LCMS: m / z = 162.0 [M+H]+.
[0399] 2-(6-bromo-1-oxospiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)-N-(5-pyrazol-1- ylpyrimidin-2-yl)acetamide: To a solution of 5-(1H-pyrazol-1-yl) pyrimidin-2-amine (30 mg, 0.19 mmol) and 2-(6-bromo-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)acetate (60 mg, 0.19 mmol) in toluene (1.5 mL) was added bis(trimethylaluminum)-1,4-diazabicyclo[2.2.2]-octane (48 mg, 0.19 mmol). The reaction mixture was stirred at 100 °C for 2 h. The reaction mixture was cooled to 0 °C, diluted with water (10 mL), and extracted with EtOAc (4 × 10 mL). The combined organics were washed with brine (10 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The crude residue was purified by reverse-phase HPLC. LCMS: m / z = 453.0, 455.0 [M+H]+.1H NMR (400 MHz, CDCl3) δ 9.12 (s, 1H), 8.71 (s, 2H), 8.03 (d, J = 8.0 Hz, 1H), 7.80 (s, 1H), 7.49-7.46 (m, 1H), 7.31 (s, 1H), 7.24 (s, 1H), 7.02 (s, 1H), 4.62 (s, 2H), 3.56 (s, 2H), 1.15-1.11 (m, 2H), 1.10-1.07 (m, 2H). Example 49 2-(6-bromo-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)-N-[3-(1-hydroxy-1-methyl-ethyl)- 1-bicyclo[1.1.1]pentanyl]acetamide (49)
[0400] tert-butyl (3-(2-hydroxypropan-2-yl)bicyclo[1.1.1]pentan-1-yl)carbamate: To a solution of methyl 3-((tert-butoxycarbonyl)amino)bicyclo[1.1.1]pentane-1-carboxylate (2.0 g, 8.29 mmol) in THF (20 mL) at 0 °C was added MeMgBr (11.1 mL, 3 M in diethyl ether). The reaction mixture was stirred at 20 °C for 2 h. The reaction mixture was diluted with sat. aq. NH4Cl (20 mL) and extracted with EtOAc (3 × 8 mL). The combined organics were washed with brine (20 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure to provide a residue that was used directly.1H NMR (400 MHz, DMSO-d6): δ 7.35 (br s, 1H), 4.08 (s, 1H), 1.69 (s, 6H), 1.36 (s, 9H), 1.02 (s, 6H).
[0401] 2-(3-aminobicyclo[1.1.1]pentan-1-yl)propan-2-ol HCl salt: A solution of tert-butyl (3-(2- hydroxypropan-2-yl)bicyclo[1.1.1]pentan-1-yl)carbamate (1.0 g, 4.14 mmol) in HCl (10 mL, 4 N in MeOH) was stirred at 20 °C for 2 h. The reaction mixture was concentrated under reduced pressure to provide a residue that was used directly.1H NMR (400 MHz, DMSO-d6): δ 8.89 (br s, 3H), 1.86-1.72 (m, 6H), 1.07-1.00 (m, 6H).
[0402] 2-(6-bromo-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)-N-[3-(1-hydroxy-1- methyl-ethyl)-1-bicyclo[1.1.1]pentanyl]acetamide: To a solution of 2-(3-aminobicyclo[1.1.1]pentan-1- yl)propan-2-ol HCl salt (55 mg, 0.31 mmol) in DMF (1.0 mL) were added 2-(6-bromo-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)acetic acid (80 mg, 0.26 mmol), DIPEA (134 mg, 1.03 mmol), and HATU (196 mg, 0.52 mmol). The reaction mixture was stirred at 20 °C for 2 h. The reaction mixture was diluted with water (5 mL) and extracted with EtOAc (3 × 2 mL). The combined organic layers were washed with brine (5 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by reverse-phase HPLC. LCMS: m / z = 433.1, 435.1 [M+H]+.1H NMR (400 MHz, CDCl3): δ 7.97 (d, J = 8.4 Hz, 1H), 7.47 (d, 8.4 Hz, 1H), 7.00 (s, 1H), 6.64 (s, 1H), 4.13 (s, 2H), 3.46 (s, 2H), 1.98 (s, 6H), 1.19 (s, 6H), 1.15-1.09 (m, 2H), 1.05-1.00 (m, 2H). Example 50 2-(6-bromo-1-oxospiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)-N-[3-(2-hydroxypropan-2- yl)cyclobutyl]acetamide (50)
[0403] tert-butyl (3-(2-hydroxypropan-2-yl)cyclobutyl)carbamate: To a solution of methyl 3-((tert- butoxycarbonyl)amino)cyclobutanecarboxylate (500 mg, 2.18 mmol) in THF (10 mL) at -78 °C was added MeMgBr (2.91 mL, 3 M in Et2O). The reaction mixture was stirred at 25 °C for 1 h. The reaction mixture was diluted with water (20 mL) and extracted with EtOAc (3 × 20 mL). The combined organics were washed with brine (20 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure to provide a residue that was used directly. LCMS: m / z = 230.2 [M+H]+.
[0404] 2-(3-aminocyclobutyl)propan-2-ol HCl salt: A solution of tert-butyl(3-(2-hydroxypropan-2- yl)cyclobutyl) carbamate (400 mg, 1.74 mmol) in HCl (4.0 mL, 4 N in MeOH) was stirred at 25 °C for 1 h. The reaction mixture was concentrated under reduced pressure to provide a residue that was used directly.1H NMR (400 MHz, CDCl3): δ 5.41 (br s, 3H), 2.45-2.25 (m, 3H), 2.22-2.10 (m, 1H), 1.97 (d, J = 8.8 Hz, 1H), 1.55-1.41 (m, 1H), 1.25-1.03 (m, 6H).
[0405] 2-(6-bromo-1-oxospiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)-N-[3-(2-hydroxypropan-2- yl)cyclobutyl]acetamide: To a solution of 2-(6-bromo-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]- 2-yl)acetic acid (50 mg, 0.16 mmol), HATU (96 mg, 0.25 mmol) and DIPEA (109 mg, 0.84 mmol) in DMF (2.0 mL) was added 2-(3-aminocyclobutyl)propan-2-ol HCl salt (28 mg, 0.17 mmol). The reaction mixture was stirred at 20 °C for 2 h. The reaction mixture was diluted with water (5 mL) and extracted with EtOAc (3 × 5mL). The combined organic layers were washed with brine (5 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by reverse-phase HPLC. LCMS: m / z = 421.1, 423.0 [M+H]+.1H NMR (400 MHz, CDCl3): δ 7.97 (dd, J = 8.4, 4.0 Hz, 1H), 7.48-7.45 (m, 1H), 7.02-7.00 (m, 1H), 6.84-6.66 (m, 1H), 4.37-4.23 (m, 1H), 4.18 (d, J= 5.6 Hz, 2H), 3.48 (d, J = 8.4 Hz, 2H), 2.41-2.30 (m, 4H), 2.04-1.94 (m, 1H), 1.88-1.79 (m, 1H), 1.16 (s, 3H), 1.15-1.12 (m, 2H), 1.11 (s, 3H), 1.09-1.02 (m, 2H). Example 51 2-(6-bromo-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)-N-(2-oxabicyclo[2.2.2]octan-4- yl)acetamide (51)
[0406] To a solution of 2-(6-bromo-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)acetic acid (15 mg, 0.048 mmol) in DMF (1.4 mL) were added 2-oxabicyclo[2.2.2]octan-4-amine (8.6 mg, 0.068 mmol), DIPEA (18.8 mg, 0.15 mmol), and T3P (40 mg, 0.068 mmol, 50% in DMF). The reaction mixture was stirred at 25 °C for 1 h. The reaction mixture was directly purified directly by reverse-phase HPLC. LCMS: m / z = 419.4, 421.4 [M+H]+.1H NMR (400 MHz, DMSO-d6): δ 7.80 (d, J = 8.3 Hz, 1H), 7.62 (s, 1H), 7.51 (dd, J = 8.3, 1.9 Hz, 1H), 7.23 (d, J = 1.9 Hz, 1H), 4.05 (s, 2H), 3.81 (s, 2H), 3.65-3.64 (m, 1H), 3.40 (s, 2H), 2.02-1.87 (m, 4H), 1.83-1.76 (m, 2H), 1.67-1.60 (m, 2H), 1.15-1.12 (m, 2H), 1.04-1.01 (m, 2H).
[0407] The following compounds as shown in Table 1 were, or can be, made via similar procedures as those described above.Example 70 2-(6-bromo-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)-N-[(3R)-1-cyclobutyl-3- piperidyl]acetamide (70)
[0408] tert-Butyl (3R)-3-[[2-(6-bromo-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2- yl)acetyl]amino]piperidine-1-carboxylate: To a solution of 2-(6-bromo-1-oxo-spiro[3H-isoquinoline- 4,1'-cyclopropane]-2-yl)acetic acid (73 mg, 0.024 mmol), tert-butyl (3R)-3-aminopiperidine-1- carboxylate (66 mg, 0.033 mmol), DIPEA (92 mg, 0.706 mmol) in DMF (1.4 mL) was added T3P (195 mg, 0.306 mmol, 50% in DMF). The reaction mixture was stirred at 25 °C for 1 h. The reaction mixture was diluted with sat. aq. NaHCO3 (10 mL) and extracted with EtOAc (3 x 10 mL). The combinedorganics were washed with brine (10 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by reverse-phase HPLC. LCMS: m / z = 492.4, 494.4 [M+H]+.
[0409] 2-(6-bromo-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)-N-[(3R)-3- piperidyl]acetamide HCl salt: A solution of tert-butyl (3R)-3-[[2-(6-bromo-1-oxo-spiro[3H- isoquinoline-4,1'-cyclopropane]-2-yl)acetyl]amino]piperidine-1-carboxylate (101 mg, 0.20 mmol) in HCl (5 mL, 4 N in dioxane) was stirred at 23oC for 3 h. The reaction mixture was concentrated under reduced pressure to provide a residue that was used directly. LCMS: m / z = 392.3, 394.3 [M+H]+.
[0410] 2-(6-bromo-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)-N-[(3R)-1-cyclobutyl-3- piperidyl]acetamide: To a solution of 2-(6-bromo-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2- yl)-N-[(3R)-3-piperidyl]acetamide hydrochloride (30 mg, 0.07 mmol), cyclobutanone (9.8 mg, 0.14 mmol), and acetic acid (8.4 mg, 0.14 mmol) in methanol (1.0 mL) was added sodium cyanoborohydride (7.5 mg, 0.12 mmol). The reaction mixture was stirred at 23oC for 18 h. The reaction mixture was diluted with sat. aq. NaHCO3 (10 mL) and extracted with EtOAc (3 x 10 mL). The combined organics were washed with brine (15 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by reverse-phase HPLC. LCMS: m / z = 446.3448.3 [M+H]+.1H NMR (400 MHz, DMSO-d6): δ 8.16 (s, 1H), 7.81 (d, J = 8.3 Hz, 1H), 7.54-7.50 (m, 1H), 7.24 (d, J = 1.9 Hz, 1H), 4.09 (s, 2H), 3.71-3.65 (m, 1H), 3.44 (s, 2H), 2.69-2.59 (m, 2H), 1.95-1.90 (m, 2H), 1.80-1.55 (m, 8H), 1.44-1.40 (m, 2H), 1.26-1.18 (m, 1H), 1.15-1.13 (m, 2H), 1.05-1.03 (m, 2H). Example 71 methyl (3R)-3-[[2-(6-bromo-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2- yl)acetyl]amino]piperidine-1-carboxylate (71)
[0411] To a solution of 2-(6-bromo-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)-N-[(3R)-3- piperidyl]acetamide HCl salt (20 mg, 0.05 mmol) in THF (1.0 mL) were added methyl chloroformate (8.8 mg, 0.09 mmol) and DIPEA (0.02 mL, 0.14 mmol). The reaction mixture was stirred at 23 °C for 3 h. The reaction mixture was concentrated under reduced pressure. The residue was purified by reverse- phase HPLC. LCMS: m / z = 450.4, 452.4 [M+H]+.1H NMR (400 MHz, DMSO-d6): δ 8.01-7.99 (m, 1H), 7.81 (d, J = 8.3 Hz, 1H), 7.54-7.50 (m, 1H), 7.25 (d, J = 1.9 Hz, 1H), 4.12-4.09 (m, 2H), 3.81-3.75 (m, 1H), 3.68-3.63 (m, 2H), 3.59-3.55 (m, 3H), 3.44 (s, 2H), 2.98-2.91 (m, 1H), 2.84-2.68 (m, 1H), 1.82-1.65 (m, 2H), 1.43-1.36 (m, 2H), 1.16-1.13 (m, 2H), 1.05-1.03 (m, 2H).Example 72 2-(6-bromo-1-oxospiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)-N-(5-cyanopyridin-2-yl)acetamide (72)
[0412] To a solution of 2-(6-bromo-1-oxo-spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl)acetic acid (27 mg, 0.09 mmol) in MeCN (1.0 mL) were added 2-amino-5-cyanopyridine (14 mg, 0.11 mmol), 1- methylimidazole (28 mg, 0.34 mmol), and chloro-N,N,N',N'-tetramethylformamidinium hexafluorophosphate (31 mg, 0.11 mmol). The reaction mixture was stirred at 23 °C for 20 h. The reaction mixture was purified directly by reverse-phase HPLC. LCMS: m / z = 411.2, 413.2 [M+H]+.1H NMR (400 MHz, CDCl3): δ 9.17-9.15 (m, 1H), 8.56 (s, 1H), 8.32-8.30 (m, 1H), 8.02 (d, J = 8.3 Hz, 1H), 7.95-7.92 (m, 1H), 7.49-7.46 (m, 1H), 7.01 (s, 1H), 4.36 (s, 2H), 3.52 (s, 2H), 1.18-1.13 (m, 2H), 1.07- 1.03 (m, 2H).
[0413] The following compounds as shown in Table 1 were, or can be, made via similar procedures as those described above.Example 76 2-[3-methyl-1-oxo-6-(trifluoromethyl)spiro[3H-isoquinoline-4,1'-cyclopropane]-2-yl]-N-pyrimidin- 2-ylacetamide (76)
[0414] Methyl 2-(2-bromo-5-(trifluoromethyl)phenyl)-2-cyanoacetate: To a solution of 1-bromo-2- fluoro-4-(trifluoromethyl)benzene (25 g, 102.9 mmol) in NMP (250 mL) was added methyl 2- cyanoacetate (10.2 g, 102.9 mmol) and Cs2CO3(83.8 g, 257.2 mmol). The mixture was stirred at 120 °C for 3 h. The reaction mixture was diluted with water (250 mL) and extracted with EtOAc (3 × 250 mL). The combined organic layers were washed with brine (250 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography. 1H NMR (400 MHz, CDCl3): δ 7.84-7.77 (m, 2H), 7.56 (dd, J = 1.6, 8.4 Hz, 1H), 5.28 (s, 1H), 3.88 (s, 3H).
[0415] 2-(2-bromo-5-(trifluoromethyl)phenyl)acetonitrile: To a solution of methyl 2-(2-bromo-5- (trifluoromethyl)phenyl)-2-cyanoacetate (17.8 g, 55.0 mmol) in DMSO (200 mL) and water (50 mL) was added NaCl (3.22 g, 55.0 mmol). The mixture was stirred at 120 °C for 16 h. The reaction mixture was diluted with water (500 mL) and extracted with EtOAc (3 × 300 mL). The combined organic layers were washed with brine (300 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel column chromatography.1H NMR (400 MHz, CDCl3):δ 7.80-7.75 (m, 2H), 7.50 (dd, J=1.6, 8.0 Hz, 1H), 3.91 (s, 2H).
[0416] 1-(2-bromo-5-(trifluoromethyl)phenyl)cyclopropanecarbonitrile: To a solution of NaH (3.60 g, 90.1 mmol, 60% purity) in DMSO (100 mL) was added 2-(2-bromo-5- (trifluoromethyl)phenyl)acetonitrile (10.3 g, 39.2 mmol) and 1-bromo-2-chloro-ethane (6.74 g, 47.0 mmol) at 0 °C. The mixture was stirred at 20 °C for 2 h. The reaction mixture was diluted with water (300 mL) and extracted with EtOAc (3 × 150 mL). The combined organic layers were washed with brine (150 mL), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure. The residue was purified by silica gel column chromatography.1H NMR (400 MHz, CDCl3): δ 7.78 (d, J = 8.0 Hz, 1H), 7.60 (s, 1H), 7.49 (dd, J = 1.6, 8.0 Hz, 1H), 1.90-1.79 (m, 2H), 1.46-1.35 (m, 2H).
[0417] 1-(2-bromo-5-(trifluoromethyl)phenyl)cyclopropanecarbaldehyde: To a solution of 1-(2- bromo-5-(trifluoromethyl)phenyl)cyclopropanecarbonitrile (9.0 g, 31.0 mmol) in THF (100 mL) was added DIBAL (1 M in toluene, 62.1 mL) at 0 °C. The mixture was stirred at 20 °C for 12 h. The reaction mixture was diluted with water (200 mL) and extracted with EtOAc (3 × 150 mL). The combined organic layers were washed with brine (150 mL), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure. The residue was purified by silica gel column chromatography.1H NMR (400 MHz, CDCl3): δ 9.09 (s, 1H), 7.79-7.74 (m, 1H), 7.51 (s, 1H), 7.49-7.44 (m, 1H), 1.86-1.72 (m, 2H), 1.54-1.41 (m, 2H).
[0418] 1-(1-(2-bromo-5-(trifluoromethyl)phenyl)cyclopropyl)ethanol: To a solution of 1-(2-bromo- 5-(trifluoromethyl)phenyl)cyclopropanecarbaldehyde (6.0 g, 20.5 mmol) in THF (60 mL) at 0 °C was added MeMgBr (3 M in Et2O, 6.82 mL). The reaction mixture was stirred at 20 °C for 1 h. The mixture was diluted with water (100 mL) and extracted with EtOAc (3 × 50 mL). The combined organics were washed with brine (50 mL), dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel chromatography.1H NMR (400 MHz, CDCl3): δ 7.68 (d, J = 8.0 Hz, 1H), 7.59 (d, J = 1.6 Hz, 1H), 7.36 (dd, J = 1.6, 8.0 Hz, 1H), 3.85 (m, 1H), 1.14 (d, J = 6.4 Hz, 3H), 1.12-1.03 (m, 2H), 0.96-0.81 (m, 2H).
[0419] 1-(1-(2-bromo-5-(trifluoromethyl)phenyl)cyclopropyl)ethanone: To a solution of 1-(1-(2- bromo-5-(trifluoromethyl)phenyl)cyclopropyl)ethanol (2.5 g, 8.1 mmol) in DCM (30 mL) was added DMP (6.9 g, 16.2 mmol) at 0 °C. The mixture was stirred at 35 °C for 1 h. The mixture was diluted with DCM (20 mL) and washed with H2O (20 mL). The organic layer was dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by silica gel chromatography.1H NMR (400 MHz, CDCl3): δ 7.76 (d, J = 8.4 Hz, 1H), 7.62 (d, J = 2.0 Hz, 1H), 7.46 (dd, J = 8.0, 2.0 Hz, 1H), 2.03 (s, 3H), 1.90-1.76 (m, 2H), 1.31-1.19 (m, 2H).
[0420] 1-(1-(2-bromo-5-(trifluoromethyl)phenyl)cyclopropyl)ethanamine: To a solution of 1-(1-(2- bromo-5-(trifluoromethyl)phenyl)cyclopropyl)ethanone (1.8 g, 5.9 mmol) in MeOH (20 mL) was added NH4OAc (3.16 g, 41.0 mmol). Then the mixture was stirred at 20 °C for 1 h. NaBH3CN (1.84 g, 29.3 mmol) was added at 20 °C. Then the mixture was stirred at 80 °C for 16 h. The mixture was quenched with water (10 mL) and concentrated under reduced pressure. The residue was purified by reverse-phaseHPLC.1H NMR (400 MHz, CDCl3): δ 7.69 (d, J = 8.4 Hz, 1H), 7.57 (s, 1H), 7.36 (dd, J = 8.0, 1.6 Hz, 1H), 3.05 (m, 1H), 1.12-1.03 (m, 5H), 0.90-0.76 (m, 2H).
[0421] 3-methyl-6-(trifluoromethyl)spiro[2,3-dihydroisoquinoline-4,1'-cyclopropane]-1-one: To a solution of 1-(1-(2-bromo-5-(trifluoromethyl)phenyl)cyclopropyl)ethanamine (100 mg, 0.32 mmol) in toluene (10 mL) was added Pd(dba)2(9 mg, 0.02 mmol), Na2CO3(103 mg, 0.97 mmol) and bis(1- adamantyl)-butyl-phosphane (12 mg, 0.03 mmol) at 20 °C. The suspension was degassed under vacuum and purged with CO several times. The mixture was stirr...
Claims
What is claimed is:
1. A compound, or a pharmaceutically acceptable salt, stereoisomer, mixture of stereoisomers, or prodrug thereof, selected from:Ex Structure 228 unassigned enantiomer of diastereomer as shown 229 unassigned enantiomer of diastereomer as shown 230 unassigned enantiomer ofdiastereomer as shown 231 Single enantiomer 232 Single enantiomer 233 Single enantiomerEx Structure 282 Fourth eluting isomer and unassigned enantiomer of diastereomer as shown 283 First eluting isomer and unassigned enantiomer of diastereomer as shown 284 Second eluting isomer and unassigned enantiomer of diastereomer as shown 285 Mixture of enantiomers, diastereomer as shown 286 First eluting isomer and unassigned enantiomer of diastereomer as shown 287 Second eluting isomer and unassigned enantiomer of diastereomer as shown2. A pharmaceutical composition comprising a compound claim 1, or a pharmaceutically acceptable salt, stereoisomer, mixture of stereoisomers, or prodrug thereof, and a pharmaceutically acceptable carrier.
3. A method for treating a disease or condition mediated, at least in part, by NLRP3, the method comprising administering an effective amount of the pharmaceutical composition of claim 2 to a subject in need thereof.
4. The method of claim 3, wherein the disease or condition is Alzheimer disease, atherosclerosis, asthma, allergic airway inflammation, cryopyrin-associated periodic syndromes, gout, inflammatory bowel disease and related disorders, nonalcoholic fatty liver disease (NAFLD), nonalcoholic steatohepatitis (NASH), hypertension, myocardial infarction, multiple sclerosis, experimental autoimmune encephalitis, oxalate-induced nephropathy, hyperinflammation following influenza infection, graft-versus-host disease, stroke, silicosis, type 1 diabetes, obesity-induced inflammation or insulin resistance, rheumatoid arthritis, myelodysplastic syndrome, contact hypersensitivity, joint inflammation triggered by chikungunya virus, or traumatic brain injury.
5. The method of claim 4, wherein the disease is nonalcoholic fatty liver disease (NAFLD) or nonalcoholic steatohepatitis (NASH).
6. The method of claim 4, wherein the disease is Alzheimer’s disease.
7. Use of a compound of claim 1, or a pharmaceutically acceptable salt, stereoisomer, mixture of stereoisomers, or prodrug thereof, for treating a disease or condition mediated, at least in part, by NLRP3.
8. The use of claim 7, wherein the disease or condition is Alzheimer disease, atherosclerosis, asthma, allergic airway inflammation, cryopyrin-associated periodic syndromes, gout, inflammatory bowel disease and related disorders, nonalcoholic fatty liver disease (NAFLD), nonalcoholic steatohepatitis (NASH), hypertension, myocardial infarction, multiple sclerosis, experimental autoimmune encephalitis, oxalate-induced nephropathy, hyperinflammation following influenza infection, graft-versus-host disease, stroke, silicosis, type 1 diabetes, obesity-induced inflammation or insulin resistance, rheumatoid arthritis, myelodysplastic syndrome, contact hypersensitivity, joint inflammation triggered by chikungunya virus, or traumatic brain injury.
9. A compound of claim 1, or a pharmaceutically acceptable salt, stereoisomer, mixture of stereoisomers, or prodrug thereof, for use in therapy.
10. A compound of claim 1, or a pharmaceutically acceptable salt, stereoisomer, mixture of stereoisomers, or prodrug thereof, for use in treating Alzheimer disease.
11. A compound of claim 1, or a pharmaceutically acceptable salt, stereoisomer, mixture of stereoisomers, or prodrug thereof, for use in treating nonalcoholic fatty liver disease (NAFLD) or nonalcoholic steatohepatitis (NASH).
12. The use of a compound of claim 1, or a pharmaceutically acceptable salt, stereoisomer, mixture of stereoisomers, or prodrug thereof, for the manufacture of a medicament for treating a neurodegenerative disease, treating Alzheimer disease, atherosclerosis, asthma, allergic airway inflammation, cryopyrin-associated periodic syndromes, gout, inflammatory bowel disease and related disorders, nonalcoholic fatty liver disease (NAFLD), nonalcoholic steatohepatitis (NASH), hypertension, myocardial infarction, multiple sclerosis, experimental autoimmune encephalitis, oxalate-induced nephropathy, hyperinflammation following influenza infection, graft-versus-host disease, stroke, silicosis, type 1 diabetes, obesity-induced inflammation or insulin resistance, rheumatoid arthritis, myelodysplastic syndrome, contact hypersensitivity, joint inflammation triggered by chikungunya virus, or traumatic brain injury.
Citation Information
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