(2S)-n-[(1S)-1-cyano-2-phenylethyl]-1,4-oxazepane-2-carboxamides as dipeptidyl peptidase 1 inhibitors
By developing (2S)-N-[(1S)-1-chloro-2-phenacetyl]-1,4-oxaphenyl-2-hydroxyamide compounds with β-amino acid structure, the shortcomings of DPP1 inhibitors in the prior art were solved, effective inhibition of DPP1 and related proteases was achieved, and the potential for the treatment of asthma and COPD was achieved.
Patent Information
- Application Number
- JP2025012602
- Authority / Receiving Office
- JP · JP
- Patent Type
- Applications
- Current Assignee / Owner
- Priority Date
- 2014-01-24
- Filing Date
- 2025-01-29
- Publication Date
- 2025-05-09
- Estimated Expiration
- 2035-01-23
AI Technical Summary
The prior art lacks (2S)-N-[(1S)-1-chloro-2-phenylacetyl]-1,4-oxaphenylpropane-2-hydroxyamide compounds with a β-amino structure, which have strong and ideal pharmacokinetic properties for inhibiting dipeptidase 1 (DPP1).
(2S)-N-[(1S)-1-chloro-2-phenacetyl]-1,4-oxaphenylpropane-2-hydroxyamide compounds of specific structures and their acceptable pharmaceutically acceptable salts are provided as inhibitors of DPP1 for the treatment and prevention of respiratory diseases such as asthma and chronic obstructive pulmonary disease (COPD).
As DPP1 inhibitors, these compounds can effectively reduce the activities of DPP1, neutrophil protease G, and protease 3, thereby alleviating related symptoms of respiratory disease.
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Abstract
Description
[Technical field]
[0001] The technical field relates to certain (2S)-N-[(1S)-1-cyano-2-phenylethyl]-1,4-oxazepane-2-carboxamide compounds (including pharma- ceutically acceptable salts thereof) that inhibit dipeptidyl peptidase 1 (DPP1; EC 3.4.14.1) activity, their utility in the treatment and / or prevention of clinical conditions, including respiratory diseases such as asthma and chronic obstructive pulmonary disease (COPD), their use in therapy, pharmaceutical compositions containing them, and methods for making the compounds. [Background technology]
[0002] Dipeptidyl peptidase 1 (DPP1; EC 3.4.14.1), also known as cathepsin C, is a lysosomal cysteine protease belonging to the papain family with a molecular weight of 200 kDa. DPP1 was first discovered by Gutman and Fruton in 1948 (Non-Patent Document 1); however, the cDNA of the human enzyme was first described in 1995 (Non-Patent Document 2). DPP1 is the only member of the papain family that functions as a tetramer consisting of four identical subunits. Each subunit consists of an N-terminal fragment, a heavy chain and a light chain (Non-Patent Document 3).
[0003] DPP1 is constitutively expressed in many tissues, with the highest levels in the lungs, kidneys, liver and spleen. DPP1 catalyzes the removal of dipeptides from the N-terminus of polypeptide substrates with broad specificity. Recent data suggest that DPP1, in addition to being a key enzyme in lysosomal protein degradation, also functions as a key enzyme in the activation of granule serine proteases in cytotoxic T lymphocytes and natural killer cells (granzymes A and B), mast cells (chymase and tryptase) and neutrophils (cathepsin G, neutrophil elastase and proteinase 3).
[0004] Mast cells are found in many tissues, but the majority are found along the epithelial linings of the body, such as the skin, respiratory tract, and gastrointestinal tract. In humans, two types of mast cells have been identified: T type, which expresses tryptase only, and MC type, which expresses both tryptase and chymase. In humans, T type mast cells are found primarily in the alveolar tissue and intestinal mucosa, whereas TC type cells are found primarily in the skin and conjunctiva. Tryptase and chymase are thought to be important mediators of allergic diseases, involved in the processes of inflammation, bronchoconstriction, and mucus secretion.
[0005] Neutrophils play a crucial role in host defense against invading pathogens. They are produced in the bone marrow and are fully mature when released into the circulation to serve as the first line of cellular defense. Proinflammatory mediators and chemoattractants activate neutrophils and attract them to the site of infection, where they act to engulf bacteria by phagocytosis and attack the bacteria with an arsenal of antibacterial compounds using both oxidative and nonoxidative attack methods. Neutrophil elastase, a potent serine protease, is one of these antibacterial compounds apparently involved in the destruction of bacteria. Neutrophil elastase is released into the phagolysome that surrounds the microorganism and begins to destroy the microorganism. Neutrophil elastase can attack the outer membrane protein OmpA of gram-negative bacteria, helping to directly kill the pathogen by disrupting its membrane, while allowing other antibacterial compounds to enter the pathogen. In addition, neutrophil elastase may aid in the processing of other antibacterial compounds, converting them from an inactive propeptide to an active state, as for cathelicidin.
[0006] Nevertheless, neutrophil elastase can also cause problems for its host. It is one of the most destructive enzymes in the body, with the ability to degrade extracellular matrix proteins (including collagen, proteoglycans, fibronectin, platelet receptors, complement receptors, thrombomodulin, pulmonary surfactant, and cadherins) and important plasma proteins (including clotting and complement factors, immunoglobulins, several proteases, and protease inhibitors). Endogenous protease inhibitors such as α1-antitrypsin tightly control the activity of neutrophil elastase under physiological conditions. However, neutrophil elastase can evade control at sites of inflammation, and once unregulated, it can induce the release of proinflammatory cytokines such as interleukin-6 and interleukin-8, leading to acute lung injury. It can even impair host defense against infection by degrading phagocyte surface receptors and opsonins. Its negative role is explained by its involvement in the tissue destruction and inflammation that characterizes many diseases, including hereditary emphysema, chronic obstructive pulmonary disease, cystic fibrosis, adult respiratory distress syndrome, ischemia-reperfusion injury and rheumatoid arthritis.
[0007] There is strong evidence linking tryptase and chymase to many mast cell-mediated allergic, immunological and inflammatory diseases. The fact that neutrophil elastase, cathepsin G and proteinase 3 also appear to play important roles in this type of disease indicates that DPPI is a valid therapeutic target due to its central role in the activation of these proteases (Non-Patent Document 4; Non-Patent Document 5).
[0008] WO 02 / 06331 relates to certain nitrile derivatives and their use as DPP1 inhibitors.
[0009] WO 02 / 06333 relates to peptidyl nitriles and their use as DPP1 inhibitors.
[0010] WO 02 / 06333 relates to α-aminoamidonitriles and their use as DPP1 inhibitors.
[0011] WO 02 / 06331 relates to peptidyl nitrile compounds and their use as DPP1 inhibitors.
[0012] WO 2005 / 013393 relates to N-[1-cyano-2-(phenyl)ethyl]-2-azabicyclo[2.2.1]heptane-3-carboxamides and their use as DPP1 inhibitors.
[0013] US Pat. No. 5,399,433 and US Pat. No. 5,499,442 relate to β-aminoamidonitriles having inhibitory activity against cysteine proteases. [Prior art documents] [Patent documents]
[0014] [Patent Document 1] International Publication No. 2004 / 110988 [Patent Document 2] International Publication No. 2009 / 074829 [Patent Document 3] International Publication No. 2010 / 128324 [Patent Document 4] International Publication No. 2012 / 119941 [Patent Document 5] International Publication No. 2013 / 041497 [Patent Document 6] International Publication No. 2001 / 096285 [Patent Document 7] International Publication No. 2003 / 048123 [Non-patent literature]
[0015] [Non-Patent Document 1] J Biol Chem, 174, 851-858 [Non-Patent Document 2] Paris et al. 1995, FEBS Lett, 369, 326-330 [Non-Patent Document 3] Dolenc et al. 1995, J Biol Chem, 270, 21626-21631 [Non-Patent Document 4] Adkison et al. 2002, J Clin Invest, 109, 363-271 [Non-Patent Document 5] Pham et al. 2004, J Immunol, 173, 7277-7281 Summary of the Invention [Problem to be solved by the invention]
[0016] Amidonitrile compounds with β-amino acids in the form of the described (2S)-N-[(1S)-1-cyano-2-phenylethyl]-1,4-oxazepane-2-carboxamide compounds have never been disclosed. The inventors have now found that such compounds have potent DPP1 activity and / or a desirable pharmacological activity profile (e.g., reduced risk of binding to elastin-rich tissues such as the aorta).
[0017] overview Provided are compounds that are inhibitors of dipeptidyl peptidase 1 (DPP1), their use as pharmaceuticals, pharmaceutical compositions containing the compounds, and synthetic routes for the preparation of the compounds. [Means for solving the problem]
[0018] According to a first embodiment, a compound of formula (I): [ka] [In the formula, R 1 teeth, [ka] and; R 2 is hydrogen, F, Cl, Br, OSOC 1-3 Alkyl or C 1-3 alkyl; R 3 are hydrogen, F, Cl, Br, CN, CF3, SO2C 1-3 Alkyl, CONH2 or SO2NR 4 R 5 (where R 4 and R 5 together with the nitrogen atom to which they are attached form an azetidine, pyrrolidine or piperidine ring; or R 1 teeth, [ka] Selected from; X is selected from O, S or CF2; Y is selected from O or S; Q is selected from CH or N; R 6 is C 1-3 alkyl, wherein the C 1-3 Alkyl may be substituted by 1, 2 or 3 F and may also be substituted by OH, OC 1-3 Alkyl, N(C 1-3 alkyl), optionally substituted with one substituent selected from 2, cyclopropyl or tetrahydropyran; R 7 is selected from hydrogen, F, Cl or CH3. or a pharma- ceutically acceptable salt thereof.
[0019] The described compounds are inhibitors of DPP1. Thus, the described compounds can be used as medicines, particularly for disorders, diseases or conditions that respond to the inhibition of DPP1, more particularly respiratory diseases (e.g., COPD and asthma).
[0020] In another embodiment, there is provided a compound of formula (I) or a pharma- ceutically acceptable salt of a compound of formula (I) (wherein the stereochemistry is not defined, e.g., a racemate or a mixture of diastereomers).
[0021] In another aspect, there is provided a pharmaceutical formulation comprising a therapeutically effective amount of a compound of Formula (I) or a pharma- ceutically acceptable salt of a compound of Formula (I), and a pharma- ceutically acceptable diluent, excipient and / or inert carrier.
[0022] In a further embodiment, there is provided a pharmaceutical formulation for the treatment of a condition in which inhibition of dipeptidyl peptidase 1 (DPP1) is beneficial, comprising a compound of Formula (I) or a pharma- ceutically acceptable salt of a compound of Formula (I).
[0023] In a further embodiment, there is provided a compound of formula (I) or a pharma- ceutically acceptable salt of a compound of formula (I) for use in the therapy (particularly for the prophylaxis or treatment) of a respiratory disease in a mammal (particularly a human).
[0024] In a further embodiment, there is provided a compound of formula (I) or a pharma- ceutically acceptable salt of a compound of formula (I) for use in the therapy (particularly for the prophylaxis or treatment) of asthma in a mammal (particularly a human).
[0025] In a further embodiment there is provided a compound of formula (I) or a pharma- ceutically acceptable salt of a compound of formula (I) for use in the therapy (particularly for the prophylaxis or treatment) of COPD in a mammal (particularly a human).
[0026] In a further embodiment, there is provided the use of a compound of formula (I) or a pharma- ceutically acceptable salt of a compound of formula (I) for the manufacture of a medicament for the treatment and prevention of respiratory diseases.
[0027] In a further embodiment there is provided the use of a compound of formula (I) or a pharma- ceutically acceptable salt of a compound of formula (I) for the manufacture of a medicament for the treatment and prophylaxis of asthma.
[0028] In a further embodiment there is provided the use of a compound of formula (I) or a pharma- ceutically acceptable salt of a compound of formula (I) for the manufacture of a medicament for the treatment and prevention of COPD.
[0029] In yet a further embodiment, administration of a compound of formula (I) or a pharma- ceutically acceptable salt of a compound of formula (I) causes a decrease in the level of DPP1 in a mammal, particularly a human.
[0030] In yet a further embodiment, administration of a compound of Formula (I) or a pharma- ceutically acceptable salt of a compound of Formula (I) causes a decrease in the levels of DPP1, neutrophil elastase, cathepsin G and proteinase 3 in a mammal, particularly a human.
[0031] In yet a further embodiment, administration of a compound of formula (I) or a pharma- ceutically acceptable salt of a compound of formula (I) causes a decrease in DPP1 activity in a mammal, particularly a human.
[0032] In yet further embodiments, administration of a compound of Formula (I) or a pharma- ceutically acceptable salt of a compound of Formula (I) causes a decrease in DPP1 activity, neutrophil elastase activity, cathepsin G activity, and proteinase 3 activity in a mammal, particularly a human.
[0033] In accordance with another aspect, there is provided a process for the preparation of a compound of formula (I), or a pharma- ceutically acceptable salt of a compound of formula (I), and intermediates used in said process.
[0034] According to another embodiment, the compound of formula (XXIV): [ka] [In the formula, R 8 is C 1-4 alkyl or aryl, wherein the aryl is selected from R 1 may be substituted by); R 9 and R 10 together with the nitrogen atom to which they are attached represent a 5- to 7-membered saturated or unsaturated ring which may contain one further heteroatom which is oxygen, nitrogen or sulfur, which ring may be fused to a (C3-C8)cycloalkyl, heterocycloalkyl, aryl or heteroaryl ring; or R 9 and R 10 together with the nitrogen atom to which they are attached, represent a 6- to 10-membered bridged bicyclic ring optionally fused to a (C3-C8)cycloalkyl, heterocycloalkyl, aryl, or heteroaryl ring. or a pharma- ceutically acceptable salt thereof.
[0035] In a still further embodiment, there is provided a compound of formula (XXIV) or a pharma- ceutically acceptable salt of a compound of formula (XXIV) for use in the therapy (particularly for the prophylaxis or treatment) of a respiratory disease in a mammal (particularly a human).
[0036] The compounds of formula (I) exemplified herein have an IC50 value for DPP1 in an enzyme activity assay (e.g., Test A1 or Test A2 below). 50 is less than 100 nmol / L. The compounds of formula (I) also exhibit a promising pharmacological profile by separating desirable and undesirable effects in vivo. [Brief description of the drawings]
[0037] [Figure 1]FIG. 1 shows the powder X-ray diffraction pattern of Example 2: (2S)—N-{(1S)-1-cyano-2-[4-(3-methyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide, Form A. [Diagram 2] FIG. 2 shows the powder X-ray diffraction pattern of Example 2: (2S)—N-{(1S)-1-cyano-2-[4-(3-methyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide, Form B. [Diagram 3] FIG. 3 shows the powder X-ray diffraction pattern of Example 2: (2S)—N-{(1S)-1-cyano-2-[4-(3-methyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide, Form C. [Figure 4] FIG. 4 shows the powder X-ray diffraction pattern of Example 2: (2S)-N-{(1S)-1-cyano-2-[4-(3-methyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide xinafoate, Form A. [Diagram 5] FIG. 5 shows the powder X-ray diffraction pattern of Example 2: (2S)—N-{(1S)-1-cyano-2-[4-(3-methyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide R-mandelate, Form A. DETAILED DESCRIPTION OF THE PREFERRED EMBODIMENTS
[0038] Detailed Description This detailed description is intended to familiarize those skilled in the art with the invention, its purpose and its practical application so that they may readily utilize the invention. This description and its specific examples, while showing embodiments of the invention, are for illustrative purposes only. Thus, the invention is not limited to the exemplary embodiments described herein. In addition, various features of the invention that are described in the context of separate embodiments for clarity may be combined to form a single embodiment. Conversely, various features of the invention that are described in the context of a single embodiment for brevity may be combined to form a subcombination thereof.
[0039] Set forth below are definitions of various terms used in the specification and claims to describe the invention.
[0040] For the avoidance of doubt, wherever a group is qualified herein by the statement "as defined above," it will be understood that this group encompasses the broadest definition first described and each and every alternative definition of that group.
[0041] For the avoidance of doubt, it is to be understood that in this specification, 1-3 " means a carbon group having 1, 2 or 3 carbon atoms.
[0042] In this specification, unless otherwise stated, the term "alkyl" includes both straight and branched chain alkyl groups and may be, but is not limited to, methyl, ethyl, n-propyl or i-propyl.
[0043] In this specification, unless otherwise specified, the term "pharmaceutical acceptable" is used to characterize a moiety (e.g., a salt, a dosage form, or an excipient) as appropriate for use according to sound medical judgment. Generally, a pharmaceutical acceptable moiety has one or more benefits that outweigh any adverse effects that the moiety may have. Adverse effects can include, for example, excessive toxicity, irritation, allergic reactions, and other problems and complications.
[0044] R 1 ~R 7 Disclosed are compounds of formula (I) wherein X, Y and Q are as defined in formula (I).
[0045] In one embodiment, R 1 teeth, [ka] and; R 2 is hydrogen, F, Cl, Br, OSOC 1-3 Alkyl or C 1-3 alkyl; R 3 are hydrogen, F, Cl, Br, CN, CF3, SO2C 1-3 Alkyl, CONH2 or SO2NR 4 R 5 where R 4 and R 5 together with the nitrogen atom to which they are attached form an azetidine ring, a pyrrolidine ring, or a piperidine ring.
[0046] In a further embodiment, R 1 teeth, [ka] and; R 2 is hydrogen, F, Cl or C 1-3 alkyl; R 3 is hydrogen, F, Cl, CN or SO2C 1-3 is selected from alkyl.
[0047] In yet a further embodiment, R 1 teeth, [ka] and; R 2 is hydrogen, F or C1-3 alkyl; R 3 is selected from hydrogen, F or CN.
[0048] In yet a further embodiment, R 1 teeth, [ka] Selected from; X is selected from O, S or CF2; Y is selected from O or S; Q is selected from CH or N; R 6 is C 1-3 alkyl, wherein the C 1-3 Alkyl may be substituted by 1, 2 or 3 F and may also be substituted by OH, OC 1-3 Alkyl, N(C 1-3 alkyl), optionally substituted with one substituent selected from 2, cyclopropyl or tetrahydropyran; R 7 is selected from hydrogen, F, Cl or CH3.
[0049] In yet a further embodiment, R 1 teeth, [ka] Selected from; X is selected from O, S or CF2; Y is selected from O or S; R 6 is C 1-3 alkyl, wherein the C 1-3 Alkyl may be substituted by 1, 2 or 3 F and may also be substituted by OH, OC 1-3 Alkyl, N(C 1-3alkyl), optionally substituted with one substituent selected from 2, cyclopropyl or tetrahydropyran; R 7 is selected from hydrogen, F, Cl or CH3.
[0050] In yet a further embodiment, R 1 teeth, [ka] Selected from; X is selected from O, S or CF2; R 6 is C 1-3 alkyl, wherein the C 1-3 The alkyl may be optionally substituted by 1, 2 or 3 F; R 7 is selected from hydrogen, F, Cl or CH3.
[0051] In yet a further embodiment, R 1 teeth, [ka] Selected from; X is O; R 6 is C 1-3 alkyl, wherein the C 1-3 The alkyl may be optionally substituted by 1, 2 or 3 F; R 7 is hydrogen.
[0052] In one embodiment, R 2 is hydrogen, F, Cl, Br, OSOC 1-3 Alkyl or C 1-3 is selected from alkyl.
[0053] In a further embodiment, R 2 is hydrogen, F, Cl or C 1-3 is selected from alkyl.
[0054] In yet a further embodiment, R 2 is hydrogen, F or C 1-3 is selected from alkyl.
[0055] In one embodiment, R 3 are hydrogen, F, Cl, Br, CN, CF3, SO2C 1-3 Alkyl, CONH2 or SO2NR 4 R 5 where R 4 and R 5 together with the nitrogen atom to which they are attached form an azetidine ring, a pyrrolidine ring, or a piperidine ring.
[0056] In a further embodiment, R 3 is hydrogen, F, Cl, CN or SO2C 1-3 is selected from alkyl.
[0057] In yet a further embodiment, R 3 is selected from hydrogen, F or CN.
[0058] In one embodiment, R 6 is C 1-3 alkyl, wherein the C 1-3 Alkyl may be substituted by 1, 2 or 3 F and may also be substituted by OH, OC 1-3 Alkyl, N(C 1-3 It may be substituted by one substituent selected from alkyl, cyclopropyl or tetrahydropyran.
[0059] In a further embodiment, R 6 is C 1-3 alkyl, wherein the C 1-3 The alkyl may be substituted by 1, 2 or 3 F.
[0060] In yet a further embodiment, R 6 is selected from methyl and ethyl.
[0061] In yet a further embodiment, R 6 is methyl.
[0062] In one embodiment, R 7 is selected from hydrogen, F, Cl or CH3.
[0063] In a further embodiment, R 7 is hydrogen.
[0064] One or more of the above embodiments may be combined to provide further specific embodiments of the present invention.
[0065] In one embodiment, the compound of formula (I) is selected from: (2S)-N-[(1S)-1-cyano-2-(4'-cyanobiphenyl-4-yl)ethyl]-1,4-oxazepane-2-carboxamide, (2S)-N-{(1S)-1-cyano-2-[4-(3-methyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide, (2S)-N-{(1S)-1-cyano-2-[4-(3,7-dimethyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide, 4'-[(2S)-2-cyano-2-{[(2S)-1,4-oxazepan-2-ylcarbonyl]amino}ethyl]biphenyl-3-yl methanesulfonate, (2S)-N-{(1S)-1-cyano-2-[4-(3-methyl-1,2-benzoxazol-5-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide, (2S)-N-{(1S)-1-cyano-2-[4'-(trifluoromethyl)biphenyl-4-yl]ethyl}-1,4-oxazepane-2-carboxamide, (2S)-N-[(1S)-1-cyano-2-(3',4'-difluorobiphenyl-4-yl)ethyl]-1,4-oxazepane-2-carboxamide, (2S)-N-{(1S)-1-cyano-2-[4-(6-cyanopyridin-3-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide, (2S)-N-{(1S)-1-cyano-2-[4-(4-methyl-3-oxo-3,4-dihydro-2H-1,4-benzothiazin-6-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide, (2S)-N-{(1S)-1-cyano-2-[4-(3-ethyl-7-methyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide, (2S)-N-[(1S)-1-cyano-2-{4-[3-(2-hydroxy-2-methylpropyl)-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl]phenyl}ethyl]-1,4-oxazepane-2-carboxamide, (2S)-N-[(1S)-1-cyano-2-{4-[3-(2,2-difluoroethyl)-7-fluoro-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl]phenyl}ethyl]-1,4-oxazepane-2-carboxamide, (2S)-N-[(1S)-1-cyano-2-(4-{3-[2-(dimethylamino)ethyl]-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl}phenyl)ethyl]-1,4-oxazepane-2-carboxamide, (2S)-N-{(1S)-1-cyano-2-[4-(3,3-difluoro-1-methyl-2-oxo-2,3-dihydro-1H-indol-6-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide, (2S)-N-{(1S)-1-cyano-2-[4-(7-fluoro-3-methyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide, (2S)-N-{(1S)-1-cyano-2-[4-(3-ethyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide, (2S)-N-[(1S)-1-cyano-2-{4-[3-(cyclopropylmethyl)-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl]phenyl}ethyl]-1,4-oxazepane-2-carboxamide, (2S)-N-[(1S)-1-cyano-2-{4-[3-(2-methoxyethyl)-2-oxo-2,3-dihydro-1,3-benzothiazol-5-yl]phenyl}ethyl]-1,4-oxazepane-2-carboxamide,
[0066] (2S)-N-[(1S)-1-cyano-2-{4-[2-oxo-3-(propan-2-yl)-2,3-dihydro-1,3-benzoxazol-5-yl]phenyl}ethyl]-1,4-oxazepane-2-carboxamide, (2S)-N-{(1S)-1-cyano-2-[4-(4-methyl-3-oxo-3,4-dihydro-2H-1,4-benzoxazin-6-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide, (2S)-N-[(1S)-1-cyano-2-{4-[3-(2-methoxyethyl)-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl]phenyl}ethyl]-1,4-oxazepane-2-carboxamide, (2S)-N-{(1S)-1-cyano-2-[4-(5-cyanothiophen-2-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide, (2S)-N-[(1S)-2-(4'-carbamoyl-3'-fluorobiphenyl-4-yl)-1-cyanoethyl]-1,4-oxazepane-2-carboxamide, (2S)-N-{(1S)-1-cyano-2-[4-(1-methyl-2-oxo-1,2-dihydroquinolin-7-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide, (2S)-N-[(1S)-1-cyano-2-{4-[2-oxo-3-(tetrahydro-2H-pyran-4-ylmethyl)-2,3-dihydro-1,3-benzoxazol-5-yl]phenyl}ethyl]-1,4-oxazepane-2-carboxamide, (2S)-N-{(1S)-2-[4-(7-chloro-3-methyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]-1-cyanoethyl}-1,4-oxazepane-2-carboxamide, (2S)-N-[(1S)-1-cyano-2-{4-[3-(2,2-difluoroethyl)-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl]phenyl}ethyl]-1,4-oxazepane-2-carboxamide, (2S)-N-[(1S)-1-cyano-2-{4-[2-oxo-3-(2,2,2-trifluoroethyl)-2,3-dihydro-1,3-benzoxazol-5-yl]phenyl}ethyl]-1,4-oxazepane-2-carboxamide, (2S)-N-{(1S)-1-cyano-2-[4-(3-methyl-2-oxo-2,3-dihydro-1,3-benzothiazol-5-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide, (2S)-N-{(1S)-1-cyano-2-[4'-(methylsulfonyl)biphenyl-4-yl]ethyl}-1,4-oxazepane-2-carboxamide, (2S)-N-{(1S)-2-[4'-(azetidin-1-ylsulfonyl)biphenyl-4-yl]-1-cyanoethyl}-1,4-oxazepane-2-carboxamide, (2S)-N-[(1S)-1-cyano-2-(4'-fluorobiphenyl-4-yl)ethyl]-1,4-oxazepane-2-carboxamide, (2S)-N-{(1S)-2-[4-(1,3-benzothiazol-5-yl)phenyl]-1-cyanoethyl}-1,4-oxazepane-2-carboxamide, (2S)-N-[(1S)-1-cyano-2-(4'-cyanobiphenyl-4-yl)ethyl]-1,4-oxazepane-2-carboxamide, or (2S)-N-{(1S)-1-cyano-2-[4-(4-methyl-3-oxo-1,2,3,4-tetrahydroquinoxalin-6-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide, and pharma-ceutically acceptable salts thereof.
[0067] It should be noted that any one of these specific compounds may be disclaimed from the embodiments of the invention described herein.
[0068] Another embodiment is a product obtained by any of the processes or examples described herein.
[0069] Pharmacological properties The compounds of formula (I) and their pharma- ceutically acceptable salts have activity as pharmaceutical preparations, in particular as inhibitors of dipeptidyl peptidase 1 activity, and thus may be used in the treatment of obstructive diseases of the airways, including asthma of all severity, both intermittent and persistent, including bronchial asthma, allergic asthma, intrinsic asthma, extrinsic asthma, exercise-induced asthma, drug-induced (aspirin-induced and NSAID-induced) asthma and dust-induced asthma, as well as other causes of airway hyperresponsiveness; chronic obstructive pulmonary disease (COPD); bronchitis, including infectious bronchitis and eosinophilic bronchitis; emphysema; bronchiectasis; cystic fibrosis; sarcoidosis; alpha-1-antitrypsin deficiency; farmer's lung and related diseases; hypersensitivity pneumonitis; idiopathic fibrosing alveolitis, idiopathic interstitial pneumonia, antineoplastic diseases. pulmonary fibrosis, including fibrosis complicating drug therapy and chronic infections (including tuberculosis and aspergillosis) and other fungal infections; complications of lung transplantation; vasculitic and thrombotic disorders of the pulmonary vasculature and pulmonary hypertension; antitussive activity, including the treatment of chronic cough associated with inflammatory and secretory states of the airways, and iatrogenic cough; acute and chronic rhinitis, including rhinitis medicamentosa and vasomotor rhinitis; perennial and seasonal allergic rhinitis, including rhinitis neuropathica (hay fever); nasal polyposis; common cold and acute viral infections, including infections with respiratory syncytial virus (RSV), influenza, coronaviruses (including SARS) and adenoviruses, acute lung injury, acute respiratory distress syndrome (ARDS), and exacerbations of each of the above inspiratory disease conditions, in particular exacerbations of any type of asthma or COPD.
[0070] Thus, there is provided a compound of formula (I), or a pharma- ceutically acceptable salt thereof, as hereinbefore defined for use in therapy.
[0071] In a further aspect there is provided the use of a compound of formula (I), or a pharma- ceutically acceptable salt thereof, as hereinbefore defined in the manufacture of a medicament for use in therapy.
[0072] In the context of this specification, the term "treatment" also encompasses "prophylaxis", unless there are specific indications to the contrary. The terms "therapeutic" and "therapeutically" shall be construed accordingly.
[0073] Prevention may be particularly relevant to the treatment of individuals who have suffered from a previous episode of the disease or condition in question, or who are otherwise considered to be at high risk for the disease or condition in question. Individuals at risk of developing a particular disease or condition generally include individuals who have a family history of the disease or condition, or individuals who have been identified by genetic testing or screening as being particularly susceptible to the disease or condition.
[0074] In particular, the compounds of the present invention (including pharma- ceutically acceptable salts) may be used to treat asthma (e.g. bronchial asthma, allergic asthma, intrinsic asthma, extrinsic asthma or dust asthma, in particular chronic or refractory asthma (e.g. late-onset asthma or airway hyperresponsiveness)), chronic obstructive pulmonary disease (COPD) or allergic rhinitis.
[0075] There is also provided a method of treating or reducing the risk of an obstructive airways disease or condition (e.g. asthma or COPD), which comprises administering to a patient in need of such treatment or reduction a therapeutically effective amount of a compound of formula (I) as defined above, or a pharma- ceutical acceptable salt thereof.
[0076] In a further aspect there is provided the use of a compound of formula (I) or a pharma- ceutically acceptable salt thereof as defined above in the manufacture of a medicament for the treatment of COPD.
[0077] In a further aspect there is provided the use of a compound of formula (I) or a pharma- ceutically acceptable salt thereof as hereinbefore defined in the manufacture of a medicament for the treatment of asthma.
[0078] In a further aspect there is provided the use of a compound of formula (I) or a pharma- ceutically acceptable salt thereof as hereinbefore defined in the manufacture of a medicament for the treatment of allergic rhinitis.
[0079] In a further aspect, there is provided a compound of formula (I) or a pharma- ceutically acceptable salt thereof as hereinbefore defined for use in the treatment of allergic rhinitis.
[0080] In a further aspect, there is provided a compound of formula (I) or a pharma- ceutically acceptable salt thereof as hereinbefore defined for use in the treatment of COPD.
[0081] In a further aspect, there is provided a compound of formula (I) or a pharma- ceutically acceptable salt thereof as hereinbefore defined for use in the treatment of asthma.
[0082] Combination Therapy The compounds of formula (I), or a pharma- ceutically acceptable salt thereof, may be administered in combination with another compound used in the treatment of the above conditions.
[0083] The present invention also relates to combination therapy in which a compound of the present invention or a pharma- ceutically acceptable salt thereof is administered simultaneously, sequentially or in admixture with a second active ingredient for the treatment of one or more of the above conditions. Such combinations may be used in combination with one or more additional active ingredients.
[0084] The present invention further relates to a method for treating rheumatoid arthritis, comprising administering to a patient a therapeutically effective amount of a compound of the present invention or a pharma- ceutical acceptable salt thereof in the presence of a glucocorticoid receptor agonist (steroidal or nonsteroidal), such as triamcinolone, triamcinolone acetonide, prednisone, mometasone furoate, lotepredonol etabonate, fluticasone propionate, fluticasone furoate, fluocinolone acetonide, dexamethasone cipesilate, desisobutyryl ciclesonide, clobetasol propionate, ciclesonide, butixocort propionate, budesonide, benzyl dipropionate, or cyclohexyl benzoate. for combination with clomethasone, alclometasone dipropionate, 2,2,2-trifluoro-N-[(1S,2R)-2-[1-(4-fluorophenyl)indazol-5-yl]oxy-2-(3-methoxyphenyl)-1-methyl-ethyl]acetamide, or 3-[5-[(1R,2S)-2-(2,2-difluoropropanoylamino)-1-(2,3-dihydro-1,4-benzodioxin-6-yl)propoxy]indazol-1-yl]-N-[(3R)-tetrahydrofuran-3-yl]benzamide.
[0085] The present invention further relates to a method for treating a patient with a p38 antagonist, such as PH797804 (3-[3-bromo-4-(2,4-difluoro-benzyloxy)-6-methyl-2-oxo-2H-pyridin-1-yl]-4,N-dimethyl-benzamide), losmapimod, PF03715455 (1-[5-tert-butyl-2-(3-chloro-4-hydroxy-phenyl)pyrazole-3 -yl]-3-[[2-[[3-[2-(2-hydroxyethylsulfanyl)phenyl]-[1,2,4]triazolo[4,3-a]pyridin-6-yl]sulfanyl]phenyl]methyl]urea) or N-cyclopropyl-3-fluoro-4-methyl-5-[3-[[1-[2-[2-(methylamino)ethoxy]phenyl]cyclopropyl]amino]-2-oxo-pyrazin-1-yl]benzamide.
[0086] The present invention further relates to a method for the treatment of cancer, comprising administering to a patient a compound of the present invention or a pharma- ceutical acceptable salt thereof in combination with a phosphodiesterase (PDE) inhibitor, such as methylxanthanine (including theophylline and aminophylline), or a selective PDE isoenzyme inhibitor (including PDE4 inhibitors, or inhibitors of the isoform PDE4D), such as tetomilast, roflumilast, oglemilast, ibudilast, GPD-1116 (3-benzyl-5-phenyl-1H-pyrazolo[4,3-c][1,8]naphthyridin-4-one), lonomimilast, NVP ABE, or a combination thereof. 171 (4-[8-(2,1,3-benzoxadiazol-5-yl)-1,7-naphthyridin-6-yl]benzoic acid), RPL554 (2-[(2E)-9,10-dimethoxy-4-oxo-2-(2,4,6-trimethylphenyl)imino-6,7-dihydropyrimido[6,1-a]isoquinolin-3-yl]ethyl urea), CHF5480 ([(Z)-2-(3,5-dichloro-4-pyridyl)-1-(3,4-dimethoxyphenyl)vinyl](2S)-2-(4-isobutylphenyl)propanoate), or GSK256066 (6-[3-(dimethylcarbamoyl)phenyl]sulfonyl-4-(3-methoxyanilino)-8-methyl-quinoline-3-carboxamide).
[0087] The present invention further relates to the combination of a compound of the invention, or a pharma- ceutically acceptable salt thereof, with a modulator of chemokine receptor function, such as an antagonist of CCR1, CCR2, CCR2A, CCR2B, CCR3, CCR4, CCR5, CCR6, CCR7, CCR8, CCR9, CCR10 or CCR11 (for the CC family), such as a CCR1, CCR2B or CCR5 receptor antagonist; CXCR1, CXCR2, CXCR3, CXCR4 or CXCR5 (for the CXC family), such as a CXCR2 or CXCR3 receptor antagonist; or CX3CR1 for the C-X3-C family. For example, the present invention relates to a method for treating a pulmonary artery disease comprising administering to a patient a therapeutically effective amount of a compound of the present invention in combination with a compound of the present invention, such as PS-031291 (pyrrolidine-1,2-dicarboxylic acid 2-[(4-chloro-benzyl)-methyl-amide] 1-[(4-trifluoromethyl-phenyl)-amide]), CCX-354 (1-[4-(4-chloro-3-methoxy-phenyl)piperazin-1-yl]-2-[3-(1H-imidazol-2-yl)pyrazolo[3,4-b]pyridin-1-yl]ethanone), vicriviroc, maraviroc, cenicriviroc, navarixin (2-hydroxy-N,N-dimethyl-3-[[2-[[(1R)-1-(5-methyl-2-furyl)propyl]amino]-3,4-dioxo-cyclobuten-1-yl]amino]benzamide), SB656933 (1-(2-chloro-3-fluoro-phenyl)-3-( 4-Chloro-2-hydroxy-3-piperazin-1-ylsulfonyl-phenyl)urea), N-[2-[(2,3-difluorophenyl)methylsulfanyl]-6-[(1R,2S)-2,3-dihydroxy-1-methyl-propoxy]pyrimidin-4-yl]azetidine-1-sulfonamide, N-[6-[(1R,2S)-2,3-dihydroxy-1-methyl-propoxy]-2-[(4-fluorophenyl)methylsulfanyl]pyrimidin-4-yl]-3-methyl-azetidine-1-sulfonamide or N-[2-[(2,3-difluorophenyl)methylsulfanyl]-6-[[(1R,2R)-2,3-dihydroxy-1-methyl-propyl]amino]pyrimidin-4-yl]azetidine-1-sulfonamide.
[0088] The present invention further relates to a method for treating a leukotriene biosynthesis inhibitor, a 5-lipoxygenase (5-LO) inhibitor, or a 5-lipoxygenase-activating protein (FLAP) antagonist, such as TA270 (4-hydroxy-1-methyl-3-octyloxy-7-sinapinoylamino-2(1H)-quinolinone), PF-4191834 (2H-pyran-4-carbohydrate (C-C-C-C-O-1H)-1H-pyran-4-carbazolyl) or PF-4191834 (2H-pyran-4-carbohydrate ( ... oxamide, tetrahydro-4-[3-[[4-(1-methyl-1H-pyrazol-5-yl)phenyl]thio]phenyl]-), setileuton, CMI 977 (1-[4-[(2S,5S)-5-[(4-fluorophenoxy)methyl]tetrahydrofuran-2-yl]but-3-ynyl]-1-hydroxy-urea), fiboflavon (3-[3-tert-butylsulfanyl-1-[[4-(6-ethoxy -3-pyridyl)phenyl]methyl]-5-[(5-methyl-2-pyridyl)methoxy]indol-2-yl]-2,2-dimethyl-propanoic acid), GSK2190915 (1H-indole-2-propanoic acid, 3-[(1,1-dimethylethyl)thio]-1-[[4-(6-methoxy-3-pyridinyl)phenyl]methyl]-α,α-dimethyl-5-[(2-pyridinyl)methoxy]-), Licofelone, Quiflapon (3-[3-t ert-butylsulfanyl-1-[(4-chlorophenyl)methyl]-5-(2-quinolylmethoxy)indol-2-yl]-2,2-dimethyl-propanoic acid), veriflavone ((2R)-2-cyclopentyl-2-[4-(2-quinolylmethoxy)phenyl]acetic acid), ABT080 (4,4-bis[4-(2-quinolylmethoxy)phenyl]pentanoic acid), zileuton, zafirlukast or montelukast.
[0089] The present invention further relates to a method for treating a CRTh2 or DP2 disorder, comprising administering to a patient a compound of the present invention or a pharma- ceutical acceptable salt thereof in a therapeutically effective amount, in the presence of a CRTh2 antagonist or a DP2 antagonist, for example, ACT129968 (2-[2-[(5-acetyl-2-methoxy-phenyl)methylsulfanyl]-5-fluoro-benzimidazol-1-yl]acetic acid), AMG853 (2-[4-[4-(tert-butylcarbamoyl)-2-[(2-chloro-4-cyclopropyl-phenyl)sulfonylamino]phenoxy]-5-chloro-2-fluoro-phenyl]acetic acid), AM211 (2-[3-[2-[[benzylcarbamoyl(ethyl)amino]methyl] -4-(trifluoromethyl)phenyl]-4-methoxy-phenyl]acetic acid), 2-[4-acetamido-3-(4-chlorophenyl)sulfanyl-2-methyl-indol-1-yl]acetic acid, (2S)-2-[4-chloro-2-(2-chloro-4-ethylsulfonyl-phenoxy)phenoxy]propanoic acid, 2-[4-chloro-2-[2-fluoro-4-(4-fluorophenyl)sulfonyl-phenyl]phenoxy]acetic acid, or (2S)-2-[2-[3-chloro-4-(2,2-dimethylpyrrolidine-1-carbonyl)phenyl]-4-fluoro-phenoxy]propanoic acid.
[0090] The present invention also relates to a combination of a compound of the invention, or a pharma- ceutically acceptable salt thereof, and a myeloperoxidase antagonist, such as resveratrol, piceatannol, or 1-(2-isopropoxyethyl)-2-thioxo-5H-pyrrolo[3,2-d]pyrimidin-4-one.
[0091] In a further aspect of the invention, a compound of the invention or a pharma- ceutical acceptable salt thereof is combined with a) Toll-like receptor agonists (e.g., TLR7 agonists or TLR9 agonists); b) adenosine antagonists; c) glucocorticoid receptor agonists (steroidal or nonsteroidal); d) p38 antagonists; e) PDE4 antagonists; f) chemokine receptor function modulators (e.g., CCR1 receptor antagonists, CCR2B receptor antagonists, CCR5 receptor antagonists, CXCR2 receptor antagonists, or CXCR3 receptor antagonists); or g) CRTh2 antagonist There is provided a pharmaceutical composition (e.g. for use as a medicament for the treatment of one of the diseases or conditions described herein, such as COPD, asthma or allergic rhinitis) comprising at least one active ingredient selected from:
[0092] In one embodiment, the compound of the present invention or its pharmaceutically acceptable salt is administered simultaneously or successively with one or more additional active ingredients selected from those defined above.For example, the compound of the present invention or its pharmaceutically acceptable salt can be administered simultaneously or successively with an additional pharmaceutical composition for use as a medicament for treating one of the above diseases or conditions, such as respiratory conditions (e.g., COPD, asthma or allergic rhinitis).This additional pharmaceutical composition can be a medicament (e.g., an existing standard care medication) that the patient may already be prescribed, and can itself be a composition that contains one or more additional active ingredients selected from those defined above.
[0093] Pharmaceutical Compositions For the above therapeutic uses, the dosage varies depending on the compound used, the mode of administration, the desired treatment, and the indicated disease. For example, the daily dosage of the compound of the present invention can range from 0.05 μg per kg body weight (μg / kg) to 100 μg per kg body weight (μg / kg) when inhaled. Alternatively, the daily dosage of the compound of the present invention can range from 0.01 μg per kg body weight (μg / kg) to 100 mg per kg body weight (mg / kg) when the compound is administered orally.
[0094] The compound of formula (I) or its pharma- ceutical acceptable salt may be used alone, but is generally administered in the form of a pharmaceutical composition in which the compound of formula (I) / salt (active ingredient) is associated with a pharma- ceutical acceptable adjuvant, diluent or carrier. Conventional procedures for the selection and preparation of suitable pharmaceutical formulations are described, for example, in “Pharmaceuticals—The Science of Dosage Form Designs”, ME Aulton, Churchill Livingstone, 2nd Ed. 2002.
[0095] Depending on the mode of administration, the pharmaceutical composition preferably contains 0.05 to 99% w (weight %) of the active ingredient, more preferably 0.05 to 80% w, even more preferably 0.10 to 70% w, and even more preferably 0.10 to 50% w (all weight % based on the total composition).
[0096] The present invention also provides a pharmaceutical composition comprising a compound of formula (I) as defined above, or a pharma- ceutically acceptable salt thereof, in association with a pharma- ceutically acceptable adjuvant, diluent or carrier.
[0097] The present invention further provides a process for the preparation of a pharmaceutical composition of the invention which comprises mixing a compound of formula (I) or a pharma- ceutically acceptable salt thereof as defined above with a pharma- ceutically acceptable adjuvant, diluent or carrier.
[0098] The pharmaceutical compositions may be administered locally (e.g., to the skin, or to the lungs and / or airways), for example, in the form of creams, solutions, suspensions, heptafluoroalkane (HFA) aerosols and dry powders (e.g., formulations in inhalers known as Turbuhaler®); or systemically, for example, by oral administration in the form of tablets, capsules, syrups, powders or granules; or parenterally in the form of sterile solutions, suspensions or emulsions for injection (including intravenously, subcutaneously, intramuscularly, intravascularly or infusion); or rectally in the form of suppositories.
[0099] For oral administration, the compound of the present invention can be mixed with adjuvants, diluents or carriers, such as lactose, saccharose, sorbitol, mannitol; starches, such as potato starch, corn starch or amylopectin; cellulose derivatives; binders, such as gelatin or polyvinylpyrrolidone; disintegrants, such as cellulose derivatives, and / or lubricants, such as magnesium stearate, calcium stearate, polyethylene glycol, wax, paraffin, etc., and then compressed into tablets. If coated tablets are required, the cores prepared as described above can be coated with a suitable polymer dissolved or dispersed in water or a readily volatile organic solvent. Alternatively, tablets can be coated with a concentrated sugar solution, which can include, for example, gum arabic, gelatin, talc and titanium dioxide.
[0100] For the preparation of soft gelatin capsules, the compound of the present invention may be mixed with, for example, vegetable oil or polyethylene glycol.Hard gelatin capsules may contain granules of the compound using pharmaceutical excipients such as those mentioned above for tablets.Liquid or semisolid formulations of the compound of the present invention may also be filled into hard gelatin capsules.
[0101] Oral liquid preparations can be in the form of syrup, solution or suspension. Liquid preparations can contain, for example, the compound of the present invention, the balance being sugar, and a mixture of ethanol, water, glycerol and propylene glycol. Optionally, such liquid preparations can contain coloring agents, flavoring agents, saccharin and / or carboxymethylcellulose as thickening agents. In addition, other additives known to those skilled in the art can be used when preparing oral preparations.
[0102] Compound Production The present invention further provides a process for the preparation of compounds of formula (I) as defined above.
[0103] General manufacturing method Those skilled in the art will recognize that the compounds of the present invention can be prepared in a variety of ways, in a known manner. The following routes are merely illustrative of some of the methods that can be used to synthesize the compounds of formula (I).
[0104] The present invention further relates to a method for preparing a compound of formula (I) as defined above or a pharma- ceutically acceptable salt thereof, comprising the steps of: (II) [ka] [In the formula, R 1 is as defined in formula (I). With a compound represented by formula (III): [ka] [In the formula, PG represents a protecting group (e.g., tert-butoxycarbonyl)] and optionally thereafter reacting a compound represented by the following steps: - converting a compound of formula (I) into another compound of formula (I); Removing protecting groups; Formation of pharma- ceutically acceptable salts The method may include performing one or more of the following:
[0105] The process is conveniently carried out in the presence of a base, such as DiPEA or TEA, and one or more activating agents, such as EDCI, 2-pyridinol-1-oxide or T3P. The reaction is conveniently carried out in the presence of an organic solvent, such as DMF or DCM, at a temperature in the range, for example, from 20° C. to 100° C., in particular at ambient temperature (25° C.).
[0106] The compound represented by formula (II) may be represented by formula (IV): [ka] [In the formula, PG represents a protecting group (e.g., tert-butoxycarbonyl)] with a suitable reagent to remove the protecting group PG. An example of a suitable reagent is formic acid.
[0107] Compounds of formula (IV) can be prepared by reaction of compounds of formula (V): [ka] [wherein PG represents a protecting group (e.g., tert-butoxycarbonyl) and Hal represents a halogen (e.g., I or Br)] With a compound represented by formula (VI): [ka] [In the formula, R 1 is as defined in formula (I). or an ester thereof. The reaction is conveniently carried out in a solvent such as a dioxane / water mixture or an ACN / water mixture at a temperature in the range of, for example, 20° C. to 100° C., in particular at 75° C.
[0108] The compound represented by formula (V) may be represented by formula (VII): [ka] [wherein PG represents a protecting group (e.g., tert-butoxycarbonyl) and Hal represents a halogen (e.g., I or Br)] can be prepared from a compound of the formula:
[0109] Compounds of formula (VII) can be prepared by the reaction of amides of formula (VIII): [ka] [wherein PG represents a protecting group (e.g., tert-butoxycarbonyl) and Hal represents a halogen (e.g., I or Br)] with aqueous ammonia. The reaction is conveniently carried out in an organic solvent such as DMF at a temperature in the range of -20°C to 100°C, for example 0°C.
[0110] Compounds of formula (VIII) are either commercially available, known in the literature (eg Tetrahedron: Asymmetry, 1998, 9, 503), or may be prepared using known techniques.
[0111] Furthermore, there is also provided a process for the preparation of a compound of formula (I) as defined above, or a pharma- ceutical acceptable salt thereof, comprising the steps of: reacting a compound of formula (IX): [ka] [In the formula, R 1is as defined above, and PG represents a protecting group (e.g., tert-butoxycarbonyl). with a reagent such as Burgess's reagent or T3P, followed by reaction with a suitable reagent for removing the protecting group PG. An example of a suitable reagent is formic acid.
[0112] The compound of formula (IX) can be prepared by reaction of the compound of formula (X): [ka] [In the formula, PG represents a protecting group (e.g., tert-butoxycarbonyl)] The compound represented by formula (XI): [ka] [In the formula, R 1 is as defined in formula (I). The reaction is conveniently carried out in a solvent such as a dioxane / water mixture or an ACN / water mixture at a temperature in the range of, for example, 20° C. to 100° C., particularly at 80° C.
[0113] Compounds of formula (X) can be prepared by reaction of 1,1'-bis(diphenylphosphino)ferrocene or 1,1-bis(di-tert-butylphosphino)ferrocene with or without palladium dichloride in a solvent such as DMSO with a suitable salt such as potassium acetate to give compounds of formula (XII): [ka] [In the formula, PG represents a protecting group (e.g., tert-butoxycarbonyl)] The compound can be prepared by reacting the compound represented by the formula: with B2Pin2.
[0114] The compound of formula (XII) can be converted to a compound of formula (XIII): [ka] With a compound represented by formula (III): [ka] [In the formula, PG represents a protecting group (e.g., tert-butoxycarbonyl)] The reaction is conveniently carried out in an organic solvent such as DMF or DCM at a temperature in the range, for example, 20° C. to 100° C., particularly at ambient temperature (25° C.).
[0115] Compounds of formula (XIII) can be prepared using standard literature procedures for the formation of amides, for example in the presence of a base such as N-ethyl-morpholine or DiPEA and an activating agent such as an "uronium" reagent (e.g. TBTU) or T3P, to give compounds of formula (XIV): [ka] wherein PG is as defined in formula (VII). with aqueous ammonia. The reaction is conveniently carried out in an organic solvent such as DMF at a temperature in the range of -20°C to 100°C, for example 0°C.
[0116] Compounds of formula (IX) may be prepared by reacting compounds of formula (XII) (wherein PG represents a protecting group, e.g. tert-butoxycarbonyl) with compounds of formula (VI) or a boronic ester thereof in the presence of a catalyst such as bis[bis(1,2-diphenylphosphino)ethane]palladium(0) or Pd(dppf)Cl2·DCM and a base such as potassium carbonate or sodium carbonate. The reaction is conveniently carried out at a temperature in the range of 20° C. to 100° C., in particular at 80° C., in a solvent such as dioxane / water or ACN / water mixtures.
[0117] Furthermore, there is provided a process for the preparation of a compound of formula (I) as defined above or a pharma- ceutically acceptable salt thereof, comprising the step of reacting a compound of formula (XV): [ka] [In the formula, PG represents a protecting group (e.g., tert-butoxycarbonyl)] The compound represented by formula (VI) [wherein R 1 is as defined above] or an ester thereof. The reaction is conveniently carried out at a temperature in the range of 20° C. to 100° C., in particular at 75° C., in a solvent such as a dioxane / water mixture or an ACN / water mixture, followed by reaction with a suitable reagent to remove the protecting group PG. An example of a suitable reagent is formic acid.
[0118] Compounds of formula (XV) may be prepared from compounds of formula (XII) using standard literature procedures for dehydration of amides, for example using reagents such as Burgess reagent or TBTU or T3P, with or without a base such as DiPEA, in a solvent such as DCM or DMF, at a temperature in the range of -20°C to 100°C, for example at 25°C.
[0119] Furthermore, there is also a process for the preparation of a compound of formula (I) as defined above or a pharma- ceutically acceptable salt thereof, which comprises reacting a compound of formula (XVI): [ka] [In the formula, R 1 is as defined in formula (I). With a compound of formula (III): The reaction is conveniently carried out in an organic solvent such as DMF or DCM at a temperature in the range, for example, 20° C. to 100° C., particularly at ambient temperature (25° C.).
[0120] The compound of formula (XVI) can be prepared by reacting the compound of formula (VII) with the compound of formula (VI) [wherein R 1 is as defined in formula (I) or an ester thereof. The reaction is conveniently carried out in a solvent such as a dioxane / water mixture or an ACN / water mixture at a temperature in the range of, for example, 20° C. to 100° C., in particular at 75° C., followed by deprotection of PG.
[0121] Formula (III): [ka] Compounds of the formula (XVII): wherein PG represents a protecting group (e.g., tert-butoxycarbonyl) are commercially available or can be obtained by reaction of the formula (XVII): [ka] can be prepared from the compound of formula (I) using literature procedures for mild ester hydrolysis (e.g., Tetr. Lett., 2007, 48, 2497), for example using LiBr and a base such as TEA in a solvent such as an ACN / water mixture at, for example, 25° C.
[0122] The compound of formula (XVII) [wherein PG represents a protecting group (e.g., tert-butoxycarbonyl)] can be prepared by the reaction of formula (XVIII): [ka] using a reducing agent such as BH3-DMS in a solvent such as THF at a temperature in the range of 0-40° C., for example at 25° C.
[0123] The compound of formula (XVIII) [wherein PG represents a protecting group (e.g., tert-butoxycarbonyl)] can be prepared by the reaction of formula (XIX): [ka] can be prepared from a compound of the formula:
[0124] The compound represented by formula (XIX) can be represented by formula (XX): [ka] [In the formula, PG 1 and P.G. 2represents a protecting group (e.g., benzyl). using conditions for hydrogenation, for example using H2(g) and a reagent such as palladium dihydroxide on carbon in a solvent such as methanol or dioxane at a temperature in the range of 25-80°C, for example at 40°C, under a pressure of for example 10 bar.
[0125] Formula (XX) [wherein, PG 1 and P.G. 2 represents a protecting group (e.g., benzyl) can be represented by the formula (XXI): [ka] [In the formula, PG 1 and P.G. 2 represents a protecting group (e.g., benzyl). by reacting with methyl propionate in the presence of a base such as 4-methylmorpholine in a solvent such as toluene at a temperature in the range of 0-100° C., for example at 25° C., using conditions for the Oxa-Michael reaction.
[0126] Formula (XXI) [wherein, PG 1 and P.G. 2 represents a protecting group (e.g., benzyl) can be prepared by reacting a diprotected benzylamine (e.g., dibenzylamine) with methyl (S)-oxirane-2-carboxylate in a solvent such as ethanol at a temperature in the range of 0-78°C, e.g., 70°C.
[0127] Alternatively, the compound of formula (III): [ka] [In the formula, PG represents a protecting group (e.g., tert-butoxycarbonyl)] can be obtained by reacting a compound of formula (XXII): [ka] It can be prepared by oxidation of a compound represented by the formula:
[0128] The compound of formula (XXII) [wherein PG represents a protecting group (e.g., tert-butoxycarbonyl)] can be prepared by the reaction of the compound of formula (XXIII): [ka] [In the formula, PG 1 and P.G. 2 represents a protecting group (e.g., benzyl). with a base such as sodium hydride in a solvent such as THF at a temperature in the range of 0-60° C., for example at 25° C., and then reacting with a protecting group PG, PG as defined in formula (XXII) and (XXIII) 1 and P.G. 2 It can be prepared by the interconversion of
[0129] Formula (XXIII) [wherein, PG 1 and P.G. 2 represents a protecting group (e.g., benzyl) can be prepared by reacting a protected 3-aminopropanol (e.g., N-benzyl-3-aminopropanol) with (S)-2-((benzyloxy)methyl)oxirane in a solvent such as ethanol or propanol at a temperature in the range of 0-70° C., for example at 40° C., and then reacting the crude product with methanesulfonyl chloride in the presence of a base such as DiPEA in a solvent such as DCM at a temperature in the range of −10-25° C., for example at −5° C.
[0130] The compound of formula (VI) or its esters, and the compounds of formulae (VIII), (XI) and (XIV) are either commercially available, known in the literature or may be prepared using known techniques.
[0131] It will be appreciated by those skilled in the art that in the preparation processes of the present invention, certain functional groups, such as hydroxyl or amino groups in the reagents, may require protection by protecting groups. Thus, the preparation of the compounds of formula (I) may involve, at an appropriate stage, the removal of one or more protecting groups.
[0132] Those skilled in the art will appreciate that at any stage in the preparation of a compound of formula (I), an isomeric mixture (e.g., racemate) of a compound corresponding to any of formulas (II)-(V), (VII)-(X), and (XXII)-(XVI) is available. At any stage in the preparation, a single stereoisomer can be obtained by isolation from the isomeric mixture (e.g., racemate) using, for example, chiral chromatographic separation.
[0133] Protection and deprotection of functional groups is described in 'Protective Groups in Organic Synthesis', 4th Ed, TW Greene and PGM Wuts, Wiley (2006) and 'Protecting Groups', 3rd Ed PJ Kocienski, Georg Thieme Verlag (2005).
[0134] Further embodiments include pharma- ceutically acceptable salts of the compounds of formula (I).
[0135] Salt of compound of formula (I) may be advantageous due to one or more of its chemical or physical properties, such as stability at different temperatures and humidities, or desirable solubility in H2O, oil or other solvents.In some cases, salt can be used to aid in the isolation or purification of said compound.In some embodiments (especially when salt is intended for administration to animals (e.g., humans), or when salt is a reagent used in the preparation of compound or salt intended for administration to animals), said salt is pharmaceutically acceptable.
[0136] When the compound of formula (I) is sufficiently acidic, pharma- ceutically acceptable salts include, but are not limited to, alkali metal salts, such as Na or K, alkaline earth metal salts, such as Ca or Mg, or organic amine salts.When the compound of formula (I) is sufficiently basic, pharma- ceutically acceptable salts include, but are not limited to, inorganic or organic acid addition salts.
[0137] There may be more than one cation or anion depending on the number of charged functional groups and the valency of the cation or anion.
[0138] For a review of suitable salts, see Berge et al., J. Pharm. Sci., 1977, 66, 1-19 or “Handbook of Pharmaceutical Salts: Properties, selection and use”, PH Stahl, PG Vermuth, IUPAC, Wiley-VCH, 2002.
[0139] In salts, proton transfer occurs between the compound of formula (I) and the counter ion of the salt. However, in some cases, proton transfer may not be complete, and therefore the solid is not a true salt. In such cases, the compound of formula (I) and the "co-former" molecule in the solid interact mainly through non-ionic forces, such as hydrogen bonding. Proton transfer is in fact a continuum and can vary with temperature, and therefore it is accepted that the point at which a salt is more desirably described as a cocrystal is somewhat subjective.
[0140] If the acid or base coformer is a solid at room temperature and there is no or only partial proton transfer between the compound of formula (I) and such an acid or base coformer, a co-crystal of the coformer with the compound of formula (I) may form, rather than a salt. All such co-crystals of the compound of formula (I) are encompassed by the present invention.
[0141] Compounds of formula (I) may form co-crystal mixtures with their salts and it is to be understood that the present invention encompasses salt / co-crystal mixtures of compounds of formula (I).
[0142] The salts and co-crystals can be characterized using well-known techniques, such as powder X-ray diffraction, single crystal X-ray diffraction (e.g., to assess proton positions, bond lengths or bond angles), solid state NMR (e.g., to assess C, N or P chemical shifts) or spectroscopic techniques (e.g., to measure OH, NH or COOH signals, and IR peak shifts resulting from hydrogen bonding).
[0143] Certain compounds of formula (I) may exist in solvated form, for example hydrates and should be understood to include solvates of pharma- ceutically acceptable salts of the compounds of formula (I).
[0144] In further embodiments, certain compounds of formula (I) may exist as racemates and racemic mixtures, single enantiomers, and individual diastereomers and diastereomeric mixtures. The present invention should be understood to include all such isomers. Certain compounds of formula (I) may also contain linking groups (e.g., carbon-carbon bonds, carbon-nitrogen bonds such as amide bonds), where bond rotation is restricted for that particular linking group, e.g., due to the presence of ring bonds or double bonds. Thus, the present invention should be understood to include all such isomers. Certain compounds of formula (I) may also contain multiple tautomers. The present invention should be understood to include all such tautomers. Stereoisomers can be separated using conventional techniques, e.g., chromatography or fractional crystallization, or the stereoisomers can be prepared by stereoselective synthesis.
[0145] In further embodiments, the compounds of formula (I) include any isotopically labeled (or "radiolabeled") derivatives of the compounds of formula (I). Such derivatives are derivatives of the compounds of formula (I) in which one or more atoms are replaced with atoms having an atomic mass or mass number different from the atomic mass or mass number typically found in nature. Examples of radionuclides that can be incorporated include: 2 H (also written as "D" for deuterium).
[0146] In a further embodiment, the compounds of formula (I) may be administered in the form of a pro-drug which is broken down in the human or animal body to give a compound of formula (I). Examples of pro-drugs include in vivo hydrolysable esters of compounds of formula (I).
[0147] In vivo hydrolyzable (cleavable) esters of compounds of formula (I) containing a carboxy or hydroxy group are, for example, pharma- ceutically acceptable esters which hydrolyze in the human or animal body to produce the parent acid or alcohol. For examples of ester prodrug derivatives, see Curr. Drug. Metab. 2003, 4, 461.
[0148] Various other forms of prodrugs are known in the art. For examples of prodrug derivatives, see Nature Reviews Drug Discovery 2008, 7, 255 and references cited therein. EXAMPLES
[0149] The invention will now be further described by reference to the following non-limiting examples.
[0150] (i) Unless otherwise stated: 1 H NMR spectra were recorded on a Bruker Avance III spectrometer operating at field strengths of 400, 500 or 600 MHz. H 7.27 ppm), dimethylsulfoxide-d6 (d3-DMSO; δ H 2.50 ppm) or methanol-d4 (CD3OD; δ H The central peak of either the chromatogram or the chromatogram (3.31 ppm) was used as a reference.
[0151] (ii) MS spectra were recorded on either a Micromass ZQ single quadrupole LC-MS or a Quattro Micro LC-MS-MS following analytical HPLC using a Phenomenex Luna 5μ C18(2), 100 × 4.6 mm (plus guard cartridge) column and a gradient of 0.1% formic acid in ACN in 0.1% formic acid or a Waters Xterra MS 5μ C18, 100 × 4.6 mm (plus guard cartridge) column and a gradient of ACN in 10 mM ammonium bicarbonate in water. Ionization was routinely ESCI, with the option to obtain both ESI and APCI data in a single run. Alternatively, LC-MS experiments were performed using a Waters Acquity UPLC system coupled to a Waters Xevo Q-ToF Mass Spectrometer in ESI mode. The UPLC system was equipped with both a BEH C18 column (1.7 μm, 2.1 × 50 mm) coupled with 46 mM ammonium carbonate / NH3 buffer (pH 10) and an HSS C18 column (1.8 μm, 2.1 × 50 mm) coupled with 10 mM formic acid, 1 mM ammonium formate buffer (pH 3). When m / z values are given, generally only ions that indicate the parent mass are listed, and the mass ions quoted are either positive or negative mass ions: [M] + , [M+H] + , [MH] - or [M+2H-BOC] + .
[0152] (iii) The title and subtitle compounds of the Examples and Preparations have been named using the IUPAC naming program ACD / Name2012 from Acdlabs.
[0153] (iv) Unless otherwise stated, starting materials were commercially available and all solvents and commercially available reagents were of experimental grade and used as received. Unless otherwise stated, operations were carried out at ambient temperature, i.e., in the range of 17-28° C., and, where necessary, under an atmosphere of an inert gas such as nitrogen.
[0154] (iv) X-ray diffraction analyses were performed according to standard methods which can be found, for example, in Kitaigorodsky, AI (1973), Molecular Crystals and Molecules, Academic Press, New York; Bunn, CW (1948), Chemical Crystallography, Clarendon Press, London; or Klug, HP & Alexander, LE (1974), X-ray Diffraction Procedures, John Wiley & Sons, New York.
[0155] Samples were mounted on single crystal silicon (SSC) wafer mounts and powder X-ray diffraction was recorded using a PANalytical X'Pert PRO (reflection position, X-ray wavelength 1.5418 Å nickel-filtered Cu irradiation, voltage 45 kV, filament emission 40 mA). Automatic variable divergence and anti scatter slits were used and the sample was rotated during the measurement. Samples were scanned using a PIXCEL detector (effective length 3.35° 2θ) from 2 to 50° 2θ with a step width of 0.013° and a count time of 116 or 233 s.
[0156] It is known in the art that depending on the measurement conditions (e.g., the equipment, sample preparation, or machine used), a powder X-ray diffraction pattern is obtained that has one or more measurement errors. In particular, it is generally known that the intensities of a powder X-ray diffraction pattern can vary depending on the measurement conditions and sample preparation. For example, those skilled in the art of powder X-ray diffraction fully understand that the relative intensity of peaks can change according to the orientation of the sample under test and the type and settings of the tool used. Those skilled in the art also fully understand that the position of reflections can be influenced by the exact height at which it rests in the diffractometer and the zero calibration of the diffractometer. The planarity of the surface of the sample can also have a small effect. Therefore, those skilled in the art will fully understand that the diffractogram data presented herein should not be taken as absolute, and that crystals that give substantially the same powder diffractogram as that described herein are within the scope of the present invention (for further information, see Jenkins, R & Snyder, RL 'Introduction to X-Ray Powder Diffractometry' John Wiley & Sons, 1996).
[0157] In general, the measurement error of the diffraction angles in powder X-ray diffractograms can be about ±0.1°2θ, and this degree of measurement error should be considered when considering powder X-ray diffraction data. Furthermore, it should be understood that the intensities vary depending on the experimental conditions and therapeutic preparation (e.g., desired orientation). The following definitions for relative intensity (%) were used: 81-100%, vs (very strong); 41-80%, str (strong); 21-40%, med (moderate); 10-20%, w (weak); 1-9%, vw (very weak).
[0158] The following abbreviations are used: [Table 1]
[0159] Preparation of Boronic Ester Intermediates
[0160] Boronic ester 1 5-(5,5-Dimethyl-1,3,2-dioxaborinane-2-yl)-3,7-dimethyl-1,3-benzoxazol-2(3H)-one i) 5-Chloro-7-methyl-1,3-benzoxazol-2(3H)-one To a solution of 2-amino-4-chloro-6-methylphenol (2.5 g, 15.9 mmol) in THF (65 mL) was added CDI (3.09 g, 19.0 mmol). The reaction was heated at reflux for 2.5 h and then cooled to room temperature. The reaction mixture was transferred to a separatory funnel and diluted with EtOAc (100 mL). The mixture was washed successively with 2M hydrochloric acid, saturated aqueous sodium bicarbonate and saturated sodium chloride solutions. The organic extract was dried (sodium sulfate), filtered and concentrated under reduced pressure to give the subtitle compound as a light brown solid (2.89 g, 98%). 1 H NMR (400 MHz, DMSO-d6): 11.84 (s, 1H), 7.10 (d, 1H), 7.06 (d, 1H), 2.37 (s, 3H).
[0161] ii) 5-chloro-3,7-dimethyl-1,3-benzoxazol-2(3H)-one To a solution of 5-chloro-7-methyl-1,3-benzoxazol-2(3H)-one (1.50 g, 8.12 mmol) in DMF (100 mL) was added cesium carbonate (2.65 g, 8.12 mmol). After 20 min, methyl iodide (0.61 mL, 9.84 mmol) was added dropwise and stirred at room temperature for 2 h before pouring into ice water (100 mL). The resulting brown precipitate was collected by filtration and dried in a vacuum oven to give the subtitle compound as a brown solid (1.6 g, 100%). 1 H NMR (400 MHz, DMSO-d6): 7.27 (s, 1H), 7.07 (s, 1H), 2.31 (s, 3H) (one CH3 under a weak peak).
[0162] iii) 5-(5,5-dimethyl-1,3,2-dioxaborinane-2-yl)-3,7-dimethyl-1,3-benzoxazol-2(3H)-one To a solution of 5-chloro-3,7-dimethyl-1,3-benzoxazol-2(3H)-one (200 mg, 1.01 mmol) in 1,4-dioxane (5 mL) was added bis(neopentylglycolato)diboron (342 mg, 1.52 mmol) and potassium acetate (198 mg, 2.02 mmol). The reaction mixture was degassed under nitrogen for 15 minutes, followed by addition of XPhos (19 mg, 0.040 mmol) and chloro(2-dicyclohexylphosphino-2',4',6'-triisopropyl-1,1'-biphenyl)[2-(2'-amino-1,1'-biphenyl)]palladium(II) (XPhos-Pd-G2, 16 mg, 0.020 mmol). The reaction mixture was heated at 80°C for 3 hours. The reaction mixture was then concentrated under reduced pressure and purified by silica gel column chromatography eluting with 0-20% EtOAc in isohexane to afford the title compound as a light brown oil (184 mg, 66%). 1 H NMR (400 MHz, CDCl3): δ 7.44 (s, 1H), 7.23 (s, 1H), 3.80 (s, 4H), 3.40 (s, 3H), 2.39 (s, 3H), 1.04 (s, 6H).
[0163] Boronic acid ester 2 7-(5,5-Dimethyl-1,3,2-dioxaborinane-2-yl)-1-methylquinoxalin-2(1H)-one To a solution of 7-bromo-1-methylquinoxalin-2(1H)-one (1.0 g, 4.2 mmol) in 1,4-dioxane (15 mL) was added bis(neopentylglycolato)diboron (1.42 mg, 6.30 mmol) and potassium acetate (823 mg, 8.40 mmol). The reaction mixture was degassed under nitrogen for 30 min, and then Pd(dppf)Cl2·DCM (171 mg, 0.21 mmol) was added. The reaction mixture was heated at 80° C. for 3 h. The reaction mixture was then concentrated under reduced pressure and purified by silica gel column chromatography eluting with 30% EtOAc in isohexane to give an orange solid. Trituration with diethyl ether afforded the title compound as an off-white solid (340 mg, 30%). 1 H NMR (400 MHz, CDCl3): δ 8.37-8.30 (m, 1H), 7.79 (m, 3H), 3.82 (s, 4H), 3.75 (s, 3H), 1.06 (s, 6H).
[0164] Boronic acid ester 3 5-(5,5-Dimethyl-1,3,2-dioxaborinane-2-yl)-3-ethyl-1,3-benzoxazol-2(3H)-one i) 5-Bromo-3-ethyl-1,3-benzoxazol-2(3H)-one To a solution of 5-bromo-1,3-benzoxazol-2(3H)-one (1.07 g, 5.0 mmol) in DMF (10 mL) was added cesium carbonate (1.79 g, 5.5 mmol). Ethyl iodide (0.44 mL, 5.5 mmol) was added dropwise and the reaction was stirred at room temperature for 24 h. The solvent was removed under reduced pressure and the resulting oil was dissolved in EtOAc. The organic extract was washed successively with water and saturated sodium chloride solution, dried (magnesium sulfate), filtered and concentrated under reduced pressure. The resulting oil was purified by silica gel column chromatography eluting with DCM:isohexane in a 1:2 ratio to give the subtitle compound as a white solid (1.06 g, 88%). 1H NMR (400 MHz, CDCl3): δ 7.25 (dd, 1H), 7.13 (d, 1H), 7.08 (d, 1H), 3.87 (dd, 2H), 1.39 (t, 3H).
[0165] ii) 5-(5,5-dimethyl-1,3,2-dioxaborinane-2-yl)-3-ethyl-1,3-benzoxazol-2(3H)-one To a solution of 5-bromo-3-ethyl-1,3-benzoxazol-2(3H)-one (600 mg, 2.48 mmol) in 1,4-dioxane (10 mL) was added bis(neopentylglycolato)diboron (616 mg, 2.73 mmol) and potassium acetate (487 mg, 4.96 mmol). The reaction mixture was degassed under nitrogen for 30 min, after which Pd(dppf)Cl2·DCM (101 mg, 0.12 mmol) was added. The reaction mixture was heated at 80° C. for 4 h. The reaction mixture was then concentrated under reduced pressure and purified by silica gel column chromatography eluting with 0-20% EtOAc in isohexane to give the title compound as an off-white solid (338 mg, 57%). 1 H NMR (400 MHz, CDCl3): δ 7.60 (d, 1H), 7.41 (s, 1H), 7.19 (d, 1H), 3.90 (dd, 2H), 3.79 (s, 4H), 1.43-1.35 (m, 3H), 1.04 (s, 6H).
[0166] Boronic ester 4 5-(5,5-Dimethyl-1,3,2-dioxaborinane-2-yl)-3-ethyl-7-methyl-1,3-benzoxazol-2(3H)-one i) 5-chloro-3-ethyl-7-methyl-1,3-benzoxazol-2(3H)-one Prepared according to the procedure of boronic ester 3, step i) using 5-chloro-7-methyl-1,3-benzoxazol-2(3H)-one (boronic ester 1, step i) to give the sub-title compound as a brown solid (258 mg, 82%). 1H NMR (400 MHz, CDCl3): δ 6.93 (s, 1H), 6.82 (d, 1H), 3.85 (q, 2H), 2.35 (s, 3H), 1.37 (t, 3H).
[0167] ii) 5-(5,5-dimethyl-1,3,2-dioxaborinane-2-yl)-3-ethyl-7-methyl-1,3-benzoxazol-2(3H)-one Prepared according to the procedure of boronic ester 1, step iii) using 5-chloro-3-ethyl-7-methyl-1,3-benzoxazol-2(3H)-one to afford the title compound as an orange solid (285 mg, 81%). 1 H NMR (400 MHz, CDCl3): δ 7.42 (s, 1H), 7.24 (s, 1H), 3.93-3.83 (m, 2H), 3.78 (s, 4H), 2.37 (s, 3H), 1.41-1.32 (m, 3H), 1.04 (s, 6H).
[0168] Boronic ester 5 5-(5,5-Dimethyl-1,3,2-dioxaborinane-2-yl)-3-(2-hydroxy-2-methylpropyl)-1,3-benzoxazol-2(3H)-one i) 5-Bromo-3-(2-oxopropyl)-1,3-benzoxazol-2(3H)-one The preparation was carried out according to the procedure in step i) of boronic ester 3 using 5-bromo-1,3-benzoxazol-2(3H)-one and chloroacetone to give the sub-title compound as a yellow solid (1.31 g, 94%). 1 H NMR (400 MHz, CDCl3): δ 7.28-7.24 (m, 1H), 7.11 (d, 1H), 6.93 (d, 1H), 4.59 (s, 2H), 2.31 (s, 3H).
[0169] ii) 5-Bromo-3-(2-hydroxy-2-methylpropyl)-1,3-benzoxazol-2(3H)-one Methylmagnesium chloride (1.62 mL, 4.87 mmol, 3M solution in THF) was added to a solution of 5-bromo-3-(2-oxopropyl)-1,3-benzoxazol-2(3H)-one (1.31 g, 4.87 mmol) in THF (20 mL) with stirring at 0° C. After 1 h, further methylmagnesium chloride (0.81 mL, 2.43 mmol) was added. The reaction was allowed to warm to room temperature and stirred for 1 h before being quenched with ammonium chloride (saturated aqueous solution). The reaction mixture was diluted with EtOAc and the layers separated. The organic extract was washed successively with water and saturated sodium chloride solution, dried (magnesium sulfate), filtered and concentrated under reduced pressure. The crude product was purified by silica gel column chromatography eluting with EtOAc and isohexane to give the subtitle compound as a brown solid (428 mg, 31%). 1 H NMR (400 MHz, CDCl3): δ 8.26 (s, 1H), 7.28-7.23 (m, 1H), 7.16-7.03 (m, 1H), 7.00-6.89 (m, 1H), 3.86 (s, 2H), 1.61 (s, 6H).
[0170] iii) 5-(5,5-dimethyl-1,3,2-dioxaborinane-2-yl)-3-(2-hydroxy-2-methylpropyl)-1,3-benzoxazol-2(3H)-one Prepared according to the procedure in step ii) of boronic ester 3 using 5-bromo-3-(2-hydroxy-2-methylpropyl)-1,3-benzoxazol-2(3H)-one to afford the title compound as an orange solid (269 mg, 56%). 1 H NMR (400 MHz, CDCl3): δ 8.53 (s, 1H), 7.62 (dd, 1H), 7.42 (d, 1H), 7.06 (d, 1H), 3.96 (s, 2H), 3.76 (s, 4H), 1.62 (s, 6H), 1.11-0.96 (m, 6H).
[0171] Boronic ester 6 5-(5,5-dimethyl-1,3,2-dioxaborinane-2-yl)-7-fluoro-3-methyl-1,3-benzoxazol-2(3H)-one i) 5-Bromo-7-fluoro-1,3-benzoxazol-2(3H)-one To a solution of 2-amino-4-bromo-6-fluorophenol (2.5 g, 12.25 mmol) in THF (65 mL) was added CDI (2.38 g, 14.70 mmol). The reaction was heated at reflux for 2.5 h and then cooled to room temperature. The reaction mixture was transferred to a separatory funnel and diluted with EtOAc (100 mL). The mixture was washed successively with 2M hydrochloric acid, saturated aqueous sodium bicarbonate and saturated sodium chloride solutions. The organic extracts were dried (sodium sulfate), filtered and concentrated under reduced pressure. The resulting dark brown solid was triturated with diethyl ether and isohexane to give the subtitle compound as a light brown solid (2.01 g, 71%). 1 H NMR (400 MHz, DMSO-d6): δ 12.14 (s, 1H), 7.38 (dd, 1H), 7.16-7.15 (m, 1H).
[0172] ii) 5-Bromo-7-fluoro-3-methyl-1,3-benzoxazol-2(3H)-one A solution of 5-bromo-7-fluoro-1,3-benzoxazol-2(3H)-one (2.01 g, 8.74 mmol) in DMF (30 mL) was added dropwise to a suspension of sodium hydride (419 mg, 10.49 mmol, 60% dispersion in mineral oil) in DMF (50 mL) with stirring at 0° C. The reaction was allowed to warm to room temperature for 30 minutes and then recooled to 0° C. Methyl iodide (653 μL) was added dropwise and the reaction was allowed to warm to room temperature. After 18 hours, the reaction was carefully quenched with water and transferred to a separatory funnel. The mixture was extracted with diethyl ether (×3). The organic extract was washed successively with saturated sodium chloride solution, dried (magnesium sulfate), filtered, and concentrated under reduced pressure. The resulting material was triturated with diethyl ether and isohexane to give the sub-title compound as a pale brown solid (1.38g, 64%). 1H NMR (400 MHz, DMSO-d6): δ 7.49 (d, 1H), 7.44 (dd, 1H), 3.35 (s, 3H).
[0173] iii) 5-(5,5-dimethyl-1,3,2-dioxaborinane-2-yl)-7-fluoro-3-methyl-1,3-benzoxazol-2(3H)-one To a solution of 5-bromo-7-fluoro-3-methyl-1,3-benzoxazol-2(3H)-one (1.38 g, 5.60 mmol) in 1,4-dioxane (20 mL) was added bis(neopentylglycolato)diboron (1.39 g, 6.17 mmol) and potassium acetate (1.10 g, 11.20 mmol). The reaction mixture was degassed with nitrogen for 15 minutes, and then Pd(dppf)Cl2·DCM (229 mg, 0.28 mmol) was added. The reaction mixture was heated at 80° C. for 3 hours. The reaction mixture was then concentrated under reduced pressure and purified by silica gel column chromatography, eluting with 20% EtOAc in isohexane to give the title compound as a light brown solid (1.16 g, 75%). 1 H NMR (400 MHz, CDCl3): δ 7.36 (d, 1H), 7.19 (m, 1H), 3.78 (s, 4H), 3.42 (s, 3H), 1.03 (s, 6H).
[0174] Boronic ester 7 5-(5,5-dimethyl-1,3,2-dioxaborinane-2-yl)-3-(2,2-difluoroethyl)-1,3-benzoxazol-2(3H)-one i) 5-Bromo-3-(2,2-difluoroethyl)-7-fluoro-1,3-benzoxazol-2(3H)-one Prepared according to the procedure of boronic ester 3, step i) using 5-bromo-7-fluoro-1,3-benzoxazol-2(3H)-one (boronic ester 6, step i) and 2,2-difluoroethyl trifluoromethanesulfonate to give the sub-title compound as a brown solid (2.49 g, 89%). 1H NMR (400 MHz, CDCl3): δ 7.16 (dd, 1H), 7.05 (s, 1H), 6.08 (tt, 1H), 4.16 (td, 2H).
[0175] ii) 5-(5,5-dimethyl-1,3,2-dioxaborinane-2-yl)-3-(2,2-difluoroethyl-2-methylpropyl)-1,3-benzoxazol-2(3H)-one Prepared according to the procedure in step ii) of boronic ester 3 using 5-bromo-3-(2,2-difluoroethyl)-7-fluoro-1,3-benzoxazol-2(3H)-one to give the title compound as an off-white solid (1.15 g, 41%). 1 H NMR (400 MHz, CDCl3): δ 7.40 (d, 1H), 7.30-7.24 (m, 1H), 6.10 (tt, 1H), 4.23-4.12 (m, 2H), 3.78 (s, 4H), 1.03 (s, 6H).
[0176] Boronic ester 8 5-(5,5-Dimethyl-1,3,2-dioxaborinane-2-yl)-3-(2-(dimethylamino)ethyl)-1,3-benzoxazol-2(3H)-one i) 5-Bromo-3-(2-(dimethylamino)ethyl)-1,3-benzoxazol-2(3H)-one To 5-bromo-1,3-benzoxazol-2(3H)-one (1.80 g, 8.41 mmol) and potassium carbonate (3.87 g, 28.0 mmol) in DMF (10 mL) was added 2-dimethylaminoethyl chloride hydrochloride (1.21 g, 8.41 mmol). The reaction was heated at 125° C. for 3.5 h, then cooled to room temperature and poured into ice water. The aqueous layer was extracted with EtOAc (100 mL×4). The combined organic extracts were dried (magnesium sulfate), filtered and concentrated in vacuo. The resulting oil was dissolved in diethyl ether, washed with water, dried (magnesium sulfate), filtered and concentrated in vacuo to give the subtitle compound as a pale brown oil (1.63 g, 68%). 1H NMR (400 MHz, CDCl3): δ 7.23 (dd, 1H), 7.15 (d, 1H), 7.10-7.02 (m, 1H), 3.93-3.85 (m, 2H), 2.69-2.61 (m, 2H), 2.30 (s, 6H).
[0177] ii) 5-(5,5-dimethyl-1,3,2-dioxaborinan-2-yl)-3-(2-(dimethylamino)ethyl)-1,3-benzoxazol-2(3H)-one Prepared according to the procedure in step ii) of boronic ester 3 using 5-bromo-3-(2-(dimethylamino)ethyl)-1,3-benzoxazol-2(3H)-one to give the title compound as an off-white solid (1.15 g, 41%), which was used in the next step without further purification.
[0178] Boronic Ester 9 6-(5,5-Dimethyl-1,3,2-dioxaborinane-2-yl)-3,3-difluoro-1-methyl-1,3-dihydro-2H-indol-2-one i) 6-Bromo-3,3-difluoro-1,3-dihydro-2H-indol-2-one To a suspension of 6-bromoisatin (2.0 g, 8.75 mmol) in DCM (90 mL) stirred at room temperature was added bis(2-methoxyethyl)aminosulfur trifluoride (deoxo-fluor, 44.25 mL, 22.12 mmol, 50% solution in THF) dropwise over 30 min. After 24 h the reaction was carefully quenched with saturated sodium bicarbonate solution (40 mL) at 0° C. The aqueous layer was separated and the organic extracts were dried (hydrophobic frit / phase separator) and concentrated under reduced pressure. The crude material was purified by silica gel column chromatography eluting with 20% EtOAc in isohexane to give the subtitle compound as an orange solid (1.63 g, 74%). 1 H NMR (400 MHz, CH3OH-d4): δ 7.50-7.46 (m, 1H), 7.36 (dd, 1H), 7.18 (d, 1H), (one exchanger not seen).
[0179] ii) 6-Bromo-3,3-difluoro-1-methyl-1,3-dihydro-2H-indol-2-one Prepared according to the procedure of step i) of boronic ester 3 using 6-bromo-3,3-difluoro-1,3-dihydro-2H-indol-2-one and methyl iodide to give the subtitle compound as an orange solid (1.39 g, 82%), which was used in the next step without further purification.
[0180] iii) 6-(5,5-dimethyl-1,3,2-dioxaborinane-2-yl)-3,3-difluoro-1-methyl-1,3-dihydro-2H-indol-2-one Prepared according to the procedure of boronic ester 3, step ii) using 6-bromo-3,3-difluoro-1-methyl-1,3-dihydro-2H-indol-2-one to afford the title compound as an off-white solid (120 mg, 8%). 1 H NMR (400 MHz, CDCl3): δ 7.62 (t, 1H), 7.55-7.47 (m, 1H), 7.31-7.28 (m, 1H), 3.80 (s, 4H), 3.22 (s, 3H), 1.04 (s, 6H).
[0181] Boronic Ester 10 3-(Cyclopropylmethyl)-5-(5,5-dimethyl-1,3,2-dioxaborinane-2-yl)-1,3-benzoxazol-2(3H)-one i) 5-Bromo-3-(cyclopropylmethyl)-1,3-benzoxazol-2(3H)-one To a solution of 5-bromo-1,3-benzoxazol-2(3H)-one (1.07 g, 5.0 mmol) in DMF (10 mL) was added cesium carbonate (1.79 g, 5.5 mmol). (Bromomethyl)cyclopropane (743 mg, 5.5 mmol) was added dropwise and the reaction was stirred at room temperature for 24 h. The solvent was removed under reduced pressure and the resulting oil was dissolved in EtOAc. The organic extract was washed with water and saturated sodium chloride solution, dried (magnesium sulfate), filtered and concentrated under reduced pressure. The resulting oil was purified by silica gel column chromatography eluting with DCM:isohexane in a 1:2 ratio to give the subtitle compound as a white solid (918 mg, 68%). 1 H NMR (400 MHz, CDCl3): δ 7.24 (dd, 1H), 7.17 (d, 1H), 7.13-7.04 (m, 1H), 3.68 (d, 2H), 1.29-1.17 (m, 1H), 0.69-0.54 (m, 2H), 0.51-0.41 (m, 2H).
[0182] ii) 3-(cyclopropylmethyl)-5-(5,5-dimethyl-1,3,2-dioxaborinane-2-yl)-1,3-benzoxazol-2(3H)-one The preparation was carried out according to the procedure in step ii) of boronic ester 3 using 5-bromo-3-(cyclopropylmethyl)-1,3-benzoxazol-2(3H)-one to give the title compound as a brown solid (520 mg, 62%), which was used in the next step without further purification.
[0183] Boronic Ester 11 5-(5,5-Dimethyl-1,3,2-dioxaborinane-2-yl)-3-(2-methoxyethyl)-1,3-benzothiazol-2(3H)-one i) 5-Chloro-3-(2-methoxyethyl)-1,3-benzothiazol-2(3H)-one Prepared according to the procedure in step ii) of boronic ester 1 using 5-chloro-1,3-benzothiazol-2(3H)-one and 1-bromo-2-methoxyethane to give the sub-title compound as a yellow solid (3.5 g, 89%). 1 H NMR (400 MHz, CDCl3): δ 7.32 (d, 1H), 7.22 (d, 1H), 7.13 (dd, 1H), 4.12-4.06 (m, 2H), 3.71-3.65 (m, 2H), 3.34 (s, 3H).
[0184] ii) 5-(5,5-dimethyl-1,3,2-dioxaborinane-2-yl)-3-(2-methoxyethyl)-1,3-benzothiazol-2(3H)-one Prepared according to the procedure in step iii) of boronic ester 1 using 5-chloro-3-(2-methoxyethyl)-1,3-benzothiazol-2(3H)-one to give the title compound as a pale brown solid (1.02 g, 64%), used in the next step without further purification.
[0185] Boronic Ester 12 5-(5,5-Dimethyl-1,3,2-dioxaborinane-2-yl)-3-isopropyl-1,3-benzoxazol-2(3H)-one i) 5-Bromo-3-isopropyl-1,3-benzoxazol-2(3H)-one Prepared according to the procedure of boronic ester 3, step i) using 5-bromo-1,3-benzoxazol-2(3H)-one and 2-iodopropane to give the sub-title compound as a white solid (510 mg, 66%), used in the next step without further purification.
[0186] ii) 5-(5,5-dimethyl-1,3,2-dioxaborinane-2-yl)-3-isopropyl-1,3-benzoxazol-2(3H)-one Prepared according to the procedure in step ii) of boronic ester 3 using 5-bromo-3-isopropyl-1,3-benzoxazol-2(3H)-one to give the sub-title compound as a brown solid (132 mg, 19%) which was used in the next step without further purification.
[0187] Boronic acid ester 13 6-(5,5-Dimethyl-1,3,2-dioxaborinane-2-yl)-4-methyl-2H-1,4-benzoxazin-3(4H)-one Prepared according to the procedure of step ii) of boronic ester 3 using commercially available 6-bromo-4-methyl-2H-1,4-benzoxazin-3(4H)-one to give the title compound as a brown solid (520 mg, 62%), which was used directly without further purification.
[0188] Boronic ester 14 7-(5,5-Dimethyl-1,3,2-dioxaborinane-2-yl)-1-methylquinolin-2(1H)-one i) 7-Bromoquinolin-2(1H)-one A stirred mixture of 7-bromo-2-chloroquinoline (5.0 g, 20.6 mmol) in 5 M aqueous hydrochloric acid (133 mL) and 1,4-dioxane (14 mL) was heated at reflux for 2 h. The reaction was cooled and the resulting precipitate was collected by filtration and washed with water to give the subtitle compound as a colourless solid (4.3 g, 93%). 1 H NMR (400 MHz, DMSO-d6): δ 11.80 (s, 1H), 7.91 (d, 1H), 7.63 (d, 1H), 7.48 (d, 1H), 7.34 (dd, 1H), 6.53 (d, 1H).
[0189] ii) 7-Bromo-1-methylquinolin-2(1H)-one To a solution of 7-bromoquinolin-2(1H)-one (1.5 g, 6.64 mmol) in anhydrous THF at room temperature under a nitrogen atmosphere was added sodium hydride (320 mg, 7.98 mmol, 60% dispersion in mineral oil). After 1 h the reaction mixture was cooled to 0° C., methyl iodide (1.88 g, 0.81 ml, 13.28 mmol) was added and the reaction was allowed to warm slowly to room temperature. After 18 h the reaction was carefully quenched with water (1 mL) and concentrated under reduced pressure. The resulting residue was partitioned between EtOAc and water. The layers were separated and the aqueous layer was extracted with EtOAc. The combined organic extracts were dried (magnesium sulfate), filtered and concentrated under reduced pressure. The residue was added isohexane and recrystallised from DCM to give the subtitle compound as a colourless solid (650 mg, 40%). 1 H NMR (400 MHz, CDCl3): δ 7.62 (d, 1H), 7.53 (d, 1H), 7.40 (s, 1H), 7.35 (dd, 1H), 6.75-6.66 (m, 1H), 3.69 (s, 3H).
[0190] ii) 7-(5,5-dimethyl-1,3,2-dioxaborinane-2-yl)-1-methylquinolin-2(1H)-one Prepared according to the procedure for boronic ester 2 starting from 7-bromo-1-methylquinolin-2(1H)-one to afford the title compound as a pale pink solid (650 mg, 88%). 1 H NMR (400 MHz, CDCl3): δ 7.83 (s, 1H), 7.69-7.60 (m, 2H), 7.53 (d, 1H), 6.73 (d, 1H), 3.82 (s, 4H), 3.78 (s, 3H), 1.05 (s, 6H).
[0191] Boronic Ester 15 5-(5,5-Dimethyl-1,3,2-dioxaborinane-2-yl)-3-(tetrahydro-2H-pyran-4-ylmethyl)-1,3-benzoxazol-2(3H)-one i) 5-Bromo-3-(tetrahydro-2H-pyran-4-ylmethyl)-1,3-benzoxazol-2(3H)-one To 5-bromo-2-benzoxazolinone (795 mg, 3.7 mmol) and cesium carbonate (500 mg, 7.4 mmol) in DMF (10 mL) was added 4-(chloromethyl)tetrahydro-2H-pyran (500 mg, 3.7 mmol). The reaction was heated at 110° C. for 48 hours, then cooled to room temperature and poured into ice water. The resulting precipitate was collected by filtration and dried in vacuum to give the subtitle compound as a light brown oil (840 mg, 73%). 1 H NMR (400 MHz, DMSO-d6): δ 7.70 (s, 1H), 7.34-7.27 (m, 2H), 3.88-3.78 (m, 2H), 3.71 (d, 2H), 3.25 (td, 2H), 2.11-1.99 (m, 1H), 1.53 (d, 2H), 1.35-1.22 (m, 2H).
[0192] ii) 5-(5,5-dimethyl-1,3,2-dioxaborinane-2-yl)-3-(tetrahydro-2H-pyran-4-ylmethyl)-1,3-benzoxazol-2(3H)-one Prepared according to the procedure for boronic ester 2 starting from 5-bromo-3-(tetrahydro-2H-pyran-4-ylmethyl)-1,3-benzoxazol-2(3H)-one to give the title compound as an orange solid (440 mg, 47%). 1 H NMR (400 MHz, CDCl3): δ 7.61 (dd, 1H), 7.37 (s, 1H), 3.98 (dd, 2H), 3.79 (s, 3H), 3.75-3.69 (m, 2H), 3.40-3.32 (m, 2H), 2.25-2.11 (m, 1H), 1.66-1.53 (m, 3H), 1.53-1.39 (m, 2H), 1.04 (s, 6H) (one H below the CHCl3 peak).
[0193] Boronic ester 16 7-Chloro-5-(5,5-dimethyl-1,3,2-dioxaborinane-2-yl)-3-methyl-1,3-benzoxazol-2(3H)-one i) 4-Bromo-2-chloro-6-nitrophenol To a solution of 4-bromo-2-chlorophenol (20.0 g, 96.4 mmol) in acetic acid (100 mL) at room temperature was slowly added 70% aqueous nitric acid (11.5 mL, 190 mol). The resulting precipitate was collected by filtration to give the subtitle compound as a yellow solid (24.0 g). Used in the next step without further purification.
[0194] ii) 2-amino-4-bromo-6-chlorophenol To a solution of 4-bromo-2-chloro-6-nitrophenol (10.0 g) in ethanol (400 mL) and water (100 mL) was added calcium chloride (443 mg, 4 mmol) and iron (11.16 g, 0.2 mol). The suspension was heated at 80° C. for 2 h. The reaction was cooled, filtered, and the filtrate was concentrated under reduced pressure. The resulting residue was diluted with saturated sodium chloride solution (500 mL) and extracted with EtOAc (500 mL×2). The combined organic extracts were dried (magnesium sulfate), filtered, and concentrated under reduced pressure to give the subtitle compound as a black solid (4 g, 45%). 1 H NMR (400 MHz, CDCl3): δ 6.85 (d, 1H), 6.75 (d, 1H), 5.38 (s, 1H), 3.92 (bs, 2H).
[0195] iii) 5-Bromo-7-chloro-1,3-benzoxazol-2(3H)-one To a stirred solution of 2-amino-4-bromo-6-chlorophenol (2.0 g, 9.0 mmol) in anhydrous THF (50 mL) was added CDI (4.0 g, 24.6 mmol). The mixture was heated at reflux under nitrogen for 2.5 h. The reaction was cooled and the solvent was removed under reduced pressure. The resulting residue was washed with 2N aqueous hydrochloric acid and then triturated with methanol to give the subtitle compound as a brown solid (0.8 g, 36%). 1H NMR (400 MHz, DMSO-d6): δ 12.18 (s, 1H), 7.46 (d, 1H), 7.27 (d, 1H).
[0196] iv) 5-Bromo-7-chloro-3-methyl-1,3-benzoxazol-2(3H)-one Prepared according to the procedure of boronic ester 1, step ii) starting from 5-bromo-7-chloro-1,3-benzoxazol-2(3H)-one using potassium carbonate instead of cesium carbonate to give the sub-title compound as a brown solid (700 mg, 83%). 1 H NMR (400 MHz, CDCl3): δ 7.26 (s, 1H), 7.02 (d, 1H), 3.40 (s, 3H).
[0197] v) 7-chloro-5-(5,5-dimethyl-1,3,2-dioxaborinan-2-yl)-3-methyl-1,3-benzoxazol-2(3H)-one Prepared according to the procedure for boronic ester 2 starting from 5-bromo-7-chloro-3-methyl-1,3-benzoxazol-2(3H)-one to give the title compound as an off-white solid (170 mg, 22%). 1 H NMR (400 MHz, CDCl3): δ 7.59 (s, 1H), 7.28 (s, 1H), 3.78 (s, 4H), 3.41 (s, 3H), 1.03 (s, 6H).
[0198] Boronic ester 17 3-(2,2-difluoroethyl)-5-(5,5-dimethyl-1,3,2-dioxaborinane-2-yl)-1,3-benzoxazol-2(3H)-one i) 5-Chloro-3-(2,2-difluoroethyl)-1,3-benzoxazol-2(3H)-one To a solution of 5-chloro-1,3-benzoxazol-2(3H)-one (1 g, 5.89 mmol) in DMF (20 mL) was added cesium carbonate (3.83 g, 11.8 mmol), followed by dropwise addition of 2,2-difluoroethyl trifluoromethanesulfonate (1.38 g, 6.5 mmol) and the resulting mixture was stirred at room temperature for 30 min. Water (60 mL) was then added and the resulting precipitate was collected by filtration, washed with water and dried in vacuo to give the subtitle compound as a white solid (1.25 g, 91%). 1 H NMR (400 MHz, CDCl3): δ 7.24-7.18 (m, 1H), 7.08 (m, 1H), 7.01 (s, 1H), 6.17-5.85 (m, 1H), 4.14-4.04 (m, 2H).
[0199] ii) 3-(2,2-difluoroethyl)-5-(5,5-dimethyl-1,3,2-dioxaborinan-2-yl)-1,3-benzoxazol-2(3H)-one Prepared according to the procedure in step iii) of boronic ester 1 using 5-chloro-3-(2,2-difluoroethyl)-1,3-benzoxazol-2(3H)-one to afford the title compound as an off-white solid (670 mg, 40%). 1 H NMR (400 MHz, CDCl3): δ 7.67-7.61 (m, 1H), 7.48 (s, 1H), 7.21 (d, 1H), 6.26-5.93 (m, 1H), 4.22-4.10 (m, 2H), 3.78 (s, 4H), 1.03 (s, 6H).
[0200] Boronic ester 18 3-(2,2,2-trifluoroethyl)-5-(5,5-dimethyl-1,3,2-dioxaborinane-2-yl)-1,3-benzoxazol-2(3H)-one i) 5-chloro-3-(2,2,2-trifluoroethyl)-1,3-benzoxazol-2(3H)-one To a solution of 5-chloro-1,3-benzoxazol-2(3H)-one (1 g, 5.89 mmol) in DMF (20 mL) was added cesium carbonate (3.83 g, 11.8 mmol) followed by 2,2,2-trifluoroethyl trifluoromethanesulfonate (1.5 g, 6.5 mmol). The resulting mixture was stirred at room temperature for 30 minutes. Water (60 mL) was added and the resulting precipitate was collected by filtration, washed with water and dried in vacuo to give the subtitle compound as a white solid (1.31 g, 89%). 1 H NMR (400 MHz, CDCl3): δ 7.19-7.15 (m, 2H), 7.08 (s, 1H), 4.40 (q, 2H).
[0201] ii) 3-(2,2,2-trifluoroethyl)-5-(5,5-dimethyl-1,3,2-dioxaborinane-2-yl)-1,3-benzoxazol-2(3H)-one Prepared according to the procedure in step iii) of boronic ester 1 using 5-chloro-3-(2,2,2-trifluoroethyl)-1,3-benzoxazol-2(3H)-one to afford the title compound as an off-white solid (670 mg, 40%). 1 H NMR (400 MHz, CDCl3): δ 7.67 (dd, 1H), 7.47 (s, 1H), 7.22 (d, 1H), 4.41 (dd, 2H), 3.78 (s, 4H), 1.03 (s, 6H).
[0202] Boronic acid ester 19 5-(5,5-Dimethyl-1,3,2-dioxaborinane-2-yl)-3-methyl-1,3-benzothiazol-2(3H)-one i) 5-Chloro-3-methyl-1,3-benzothiazol-2(3H)-one To a solution of 5-chloro-1,3-benzothiazol-2(3H)-one (5.0 g, 26.9 mmol) in DMF (70 mL) was added cesium carbonate (17.5 g, 53.8 mmol). After 20 min, methyl iodide (2.51 mL, 40.4 mmol) was added dropwise. After complete addition, the reaction mixture was stirred at room temperature for 2 h and then poured into ice water (300 mL). The resulting brown precipitate was collected by filtration and dried in a vacuum oven to give the subtitle compound as a colourless solid (4.42 g, 82%). 1 H NMR (400 MHz, CDCl3): δ 7.35 (d, 1H), 7.17 (dd, 1H), 7.06 (d, 1H), 3.45 (s, 3H).
[0203] ii) 5-(5,5-dimethyl-1,3,2-dioxaborinane-2-yl)-3-methyl-1,3-benzothiazol-2(3H)-one Prepared according to the procedure in step iii) of boronic ester 1 using 5-chloro-3-methyl-1,3-benzothiazol-2(3H)-one to afford the title compound as an off-white solid (620 mg, 15%). 1 H NMR (400 MHz, CDCl3): δ 7.61 (dd, 1H), 7.50-7.36 (m, 2H), 3.80 (s, 4H), 3.48 (s, 3H), 1.04 (s, 6H).
[0204] Boronic acid ester 20 6-(5,5-Dimethyl-1,3,2-dioxaborinane-2-yl)-4-methyl-2H-1,4-benzothiazin-3(4H)-one i) 2-((4-bromo-2-nitrophenyl)thio)acetic acid To a solution of 4-bromo-1-fluoro-2-nitrobenzene (3.02 g, 15 mmol) in DMF (20 mL) was added successively with stirring at room temperature potassium carbonate (4.55 g, 33 mmol) and thioacetic acid (1.15 mL, 16.5 mmol). After 18 h, the reaction was diluted with EtOAc and water. The layers were separated. The aqueous layer was acidified and extracted with EtOAc. The organic extracts were dried (magnesium sulfate), filtered and concentrated under reduced pressure to give the subtitle compound as a yellow solid (2.60 g, 59%). 1 H NMR (400 MHz, DMSO-d6): δ 13.04 (s, 1H), 8.37 (d, 1H), 7.96-7.91 (m, 1H), 7.54 (d, 1H), 4.05 (s, 2H).
[0205] ii) 6-Bromo-2H-1,4-benzothiazin-3(4H)-one To a solution of ammonium hydroxide (26 mL) and 2-((4-bromo-2-nitrophenyl)thio)acetic acid (2.6 g, 8.93 mmol) at room temperature was slowly added iron(II) sulfate heptahydrate (18.12 g, 65.17 mmol) in water (25 mL). After 3 h, the reaction mixture was filtered through Celite and washed with ammonium hydroxide and water. The filtrate was acidified with concentrated hydrochloric acid and the resulting precipitate was collected by filtration. The solid was dissolved in EtOAc, dried (magnesium sulfate), filtered and concentrated in vacuo to give the subtitle compound as a yellow solid (1.9 g, 93%). 1 H NMR (400 MHz, DMSO-d6): δ 10.64 (br, 1H), 7.36-7.26 (m, 1H), 7.15 (dd, 2H), 3.49 (s, 2H).
[0206] iii) 6-Bromo-4-methyl-2H-1,4-benzothiazin-3(4H)-one Prepared according to the procedure of boronic ester 1, step ii) starting from 6-bromo-2H-1,4-benzothiazin-3(4H)-one to give the sub-title compound as a yellow solid (1.16 g, 86%). 1H NMR (400 MHz, CDCl3): δ 7.25 (d, 1H), 7.21 (d, 1H), 7.15 (dd, 1H), 3.42 (s, 3H), 3.40 (s, 2H).
[0207] iv) 6-(5,5-dimethyl-1,3,2-dioxaborinane-2-yl)-4-methyl-2H-1,4-benzothiazin-3(4H)-one Prepared according to the procedure in step ii) of boronic ester 3 using 6-bromo-4-methyl-2H-1,4-benzothiazin-3(4H)-one to afford the title compound as a white solid (655 mg, 45%). 1 H NMR (400 MHz, CDCl3): δ 7.58-7.44 (m, 1H), 7.45 (dd, 1H), 7.38-7.30 (m, 1H), 3.77 (s, 4H), 3.48 (s, 3H), 3.47-3.35 (m, 2H), 1.03 (s, 6H).
[0208] Boronic ester 21 5-(5,5-Dimethyl-1,3,2-dioxaborinane-2-yl)-3-(2-methoxyethyl)-1,3-benzoxazol-2(3H)-one i) 5-Bromo-3-(2-methoxyethyl)-1,3-benzoxazol-2(3H)-one Prepared according to the procedure in step i) of boronic ester 3 using 5-bromo-1,3-benzoxazol-2(3H)-one to give the sub-title compound as a yellow solid (1.15 g, 85%). 1 H NMR (400 MHz, CDCl3): δ 7.27-7.20 (m, 2H), 7.06 (d, 1H), 3.97 (t, 2H), 3.72-3.66 (m, 2H), 3.35 (s, 3H).
[0209] ii) 5-(5,5-dimethyl-1,3,2-dioxaborinane-2-yl)-3-(2-methoxyethyl)-1,3-benzoxazol-2(3H)-one The preparation was carried out according to the procedure in step ii) of boronic ester 3 using 5-bromo-3-(2-methoxyethyl)-1,3-benzoxazol-2(3H)-one to give the title compound as a yellow oil (1.15 g, 85%), which was used in the next step without further purification.
[0210] Boronic acid ester 22 5-(5,5-Dimethyl-1,3,2-dioxaborinane-2-yl)-3-methyl-1,3-benzoxazol-2(3H)-one [ka]
[0211] i) 5-Chloro-3-methyl-1,3-benzoxazol-2(3H)-one [ka] To a solution of 5-chloro-1,3-benzoxazol-2(3H)-one (10 g, 58.96 mmol) in DMF (100 mL) was added cesium carbonate (19.21 g, 58.96 mmol). After 30 min, methyl iodide (4.40 mL, 70.75 mmol) was added dropwise. After complete addition, the reaction mixture was stirred at room temperature for 18 h and then poured into ice water (500 mL). The resulting white precipitate was collected by filtration and dried over P2O5 in a vacuum oven to give the subtitle compound as a white solid (9.92 g, 92%). 1 H NMR (400 MHz, DMSO-d6): δ 7.46 (d, 1H), 7.36 (d, 1H), 7.17 (dd, 1H), 3.34 (s, 3H).
[0212] ii) 5-(5,5-dimethyl-1,3,2-dioxaborinane-2-yl)-3-methyl-1,3-benzoxazol-2(3H)-one To a solution of 5-chloro-3-methyl-1,3-benzoxazol-2(3H)-one (3.0 g, 16.3 mmol) in 1,4-dioxane (80 mL) was added bis(neopentylglycolato)diboron (5.54 g, 24.5 mmol) and potassium acetate (3.21 g, 32.7 mmol). The reaction mixture was degassed under nitrogen for 40 min, after which XPhos (311 mg, 0.65 mmol) and chloro(2-dicyclohexylphosphino-2',4',6'-triisopropyl-1,1'-biphenyl)[2-(2'-amino-1,1'-biphenyl)]palladium(II) (XPhos-Pd-G2, 257 mg, 0.33 mmol) were added. The reaction mixture was heated at 80° C. for 2 h. The reaction mixture was then concentrated in vacuo and purified by silica gel column chromatography eluting with 0-10% EtOAc in isohexane to afford the title compound as a yellow solid (4.8 mg, >100%). 1 H NMR (400 MHz, CDCl3): δ 7.61 (dd, 1H), 7.40 (s, 1H), 7.21-7.13 (m, 1H), 3.79 (s, 4H), 3.41 (s, 3H), 1.04 (s, 6H).
[0213] Preparation of intermediate building blocks
[0214] Intermediate 1 4'-[(2S)-2-Amino-2-cyanoethyl]biphenyl-4-carbonitrile i) tert-Butyl [(1S)-1-cyano-2-(4'-cyanobiphenyl-4-yl)ethyl]carbamate To a suspension of tert-butyl N-[(1S)-1-cyano-2-(4-iodophenyl)ethyl]carbamate (prepared according to the procedure on page 47 of WO 2009 / 74829) (5.99 g, 16 mmol) and (4-cyanophenyl)boronic acid (2.64 g, 18 mmol) in 1,4-dioxane (60 mL) and water (8 mL) was added potassium carbonate (4.5 g, 36 mmol). The suspension was stirred under a stream of nitrogen for 15 min before Pd(dppf)Cl2·DCM (1.3 g) was added. The reaction was heated at 75° C. for 45 min and then concentrated under reduced pressure. The resulting oil was diluted with EtOAc (200 mL) and washed with water (100 mL) and saturated sodium chloride solution (50 mL). The organic extract was dried (magnesium sulfate), filtered and evaporated under reduced pressure to give a brown oil. The oil was purified by silica gel column chromatography eluting with 20-30% EtOAc in isohexane to give the sub-title compound as a colourless solid (5.9 g, 90%). 1 H NMR (400 MHz, DMSO-d6): δ 10.63 (s, 1H), 7.96-7.81 (m, 4H), 7.73 (d, 2H), 7.45 (d, 2H), 4.71 (q, 1H), 3.18-3.05 (m, 2H), 1.36 (s, 9H).
[0215] ii) 4'-[(2S)-2-amino-2-cyanoethyl]biphenyl-4-carbonitrile tert-Butyl [(1S)-1-cyano-2-(4'-cyanobiphenyl-4-yl)ethyl]carbamate (5.4g, 15.5mmol) was dissolved in formic acid (50mL) and heated to 50°C on a preheated hotplate stirrer for 15 minutes. The solution was evaporated under reduced pressure and diluted with EtOAc (150mL). Saturated aqueous sodium bicarbonate was added to basify the mixture (pH 8). EtOAc was separated, washed with saturated sodium chloride, dried (magnesium sulfate), filtered and evaporated under reduced pressure to give a yellow oil. The oil was purified by silica gel column chromatography eluting with EtOAc to give the title compound as a colorless solid (2.88g, 74%). 1H NMR (400 MHz, CDCl3): δ 7.62 (m, 4H), 7.52 (m, 2H), 7.35 (d, 2H), 3.92 (t, 1H), 3.10-2.96 (m, 2H) (two exchangeable protons not observed).
[0216] Intermediate 2 (2S)-2-Amino-3-[4-(3-methyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]propanenitrile i) tert-Butyl {(1S)-1-cyano-2-[4-(3-methyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]ethyl}carbamate [ka] 5-(5,5-Dimethyl-1,3,2-dioxaborinan-2-yl)-3-methyl-1,3-benzoxazol-2(3H)-one (boronic ester 22, 3.34 g, 12.81 mmol) and (S)-(1-cyano-2-(4-iodophenyl)ethyl) tert-butyl carbamate (prepared according to the procedure on page 47 of WO 2009 / 074829) (12.81 mmol) were dissolved in 1,4-dioxane (340 mL) and water (12 mL). The reaction mixture was degassed under nitrogen for 30 minutes before potassium carbonate (2.66 g, 19.21 mmol) and Pd(dppf)Cl2·DCM (1.05 g, 1.28 mmol) were added. The reaction mixture was heated at 80° C. for 1.5 hours. The reaction was then concentrated under reduced pressure. The residue was diluted with EtOAc (200 mL) and water (50 mL). The mixture was filtered through Celite and the layers were separated. The organic extract was washed with saturated sodium chloride solution, dried (magnesium sulfate), filtered and evaporated. The resulting oil was purified by silica gel column chromatography eluting with a gradient of 0-40% EtOAc in isohexane to give the subtitle compound as a white solid (3.87 mg, 77%). 1H NMR (400 MHz, CDCl3): δ 7.51-7.46 (m, 2H), 7.31 (d, 2H), 7.21-7.17 (m, 3H), 7.12-7.06 (m, 1H), 4.78 (s, 1H), 3.39 (s, 3H), 3.14-2.98 (m, 2H), 1.39 (s, 9H).
[0217] ii) (2S)-2-amino-3-[4-(3-methyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]propanenitrile [ka] To tert-butyl {(1S)-1-cyano-2-[4-(3-methyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]ethyl}carbamate (3.87 g, 9.84 mmol) was added formic acid (32 mL). The mixture was heated on a preheated hotplate stirrer at 50° C. for 15 min. After which the solvent was removed under reduced pressure. The residue was dissolved in DCM, washed with saturated bicarbonate solution, dried (phase separator cartridge) and concentrated under reduced pressure. The crude material was purified by silica gel column chromatography eluting with 80-100% EtOAc in isohexane to give the title compound as a white solid (1.76 g, 59%). 1 H NMR (400 MHz, CDCl3): δ 7.60-7.50 (m, 2H), 7.39 (d, 2H), 7.34-7.30 (m, 1H), 7.25 (t, 1H), 7.14 (d, 1H), 4.02-3.96 (m, 1H), 3.45 (s, 3H), 3.18-3.01 (m, 2H), 1.67 (s, 2H).
[0218] Intermediate 3 (2S)-4-(tert-butoxycarbonyl)-1,4-oxazepane-2-carboxylic acid [ka]
[0219] i) 3-{benzyl[(2S)-3-(benzyloxy)-2-hydroxypropyl]amino}propan-1-ol [ka] A solution of N-benzylpropanolamine (3.3 g) and benzyl (S)-(+)-glycidyl ether (3.6 g) in ethanol (40 mL) was heated at 40° C. for 18 h. The solvent was evaporated under reduced pressure to give the sub-title compound as a colourless oil (6.8 g, 100%) which was used without further purification. 1 H NMR (400 MHz, DMSO-d6): δ 7.29 (m, 10H), 4.54 (m, 1H), 4.45 (s, 2H), 4.36 (t, 2H), 3.76 (m, 1H), 3.44 (m, 5H), 2.47 (m, 4H), 1.57 (m, 2H).
[0220] ii) (2S)-4-benzyl-2-[(benzyloxy)methyl]-1,4-oxazepane [ka] Sodium hydride (15.2 g, 0.38 mol, 60% dispersion in oil) was added dropwise to a stirred solution of 3-{benzyl[(2S)-3-(benzyloxy)-2-hydroxypropyl]amino}propan-1-ol (50.0 g, 0.153 mol) in THF (2.5 L) at 0° C. The reaction was stirred at 0° C. for 30 min, then p-toluenesulfonylimidazole (37.8 g, 0.17 mol) was added dropwise. The reaction was warmed to room temperature and stirred for 4 h before being cooled to 0° C. The reaction was quenched by careful addition of saturated sodium bicarbonate solution (70 mL). The solvent was removed under reduced pressure and the crude residue was partitioned between water (400 mL) and EtOAc (400 mL). The layers were separated and the aqueous portion was extracted with EtOAc (400 mL×2). The combined organic extracts were dried (magnesium sulfate), filtered and evaporated under reduced pressure to give an oil which was purified by silica gel column chromatography eluting with a 0-50% EtOAc in isohexane gradient to give the sub-title compound as a colourless oil (12.2 g, 26%). 1 H NMR (400 MHz, DMSO-d6): δ 7.36-7.20 (m, 10H), 4.45-4.35 (m, 2H), 3.81-3.65 (m, 2H), 3.60-3.39 (m, 2H), 3.42-3.31 (m, 2H), 3.25 (dd, 1H), 2.86 (d, 1H), 2.78-2.70 (m, 1H), 2.54-2.46 (m, 1H) 2.37 (dd, 1H), 1.89-1.77 (m, 1H), 1.78-1.66 (m, 1H).
[0221] iii) (2S)-2-(hydroxymethyl)-1,4-oxazepane-4-carboxylate tert-butyl [ka] To a solution of (2S)-4-benzyl-2-[(benzyloxy)methyl]-1,4-oxazepane (12.2 g, 39.2 mmol) in ethanol (250 mL) under nitrogen was added di-tert-butyl dicarbonate (10.22 g, 47.1 mmol) and 20% palladium on carbon (16.5 g). The reaction mixture was shaken under a hydrogen atmosphere at 50 psi for 18 hours. The reaction mixture was then filtered through Celite and washed with methanol. The solvent was evaporated under reduced pressure to give the subtitle compound as a colourless oil (11.16 g). 1 H NMR (400 MHz, DMSO-d6): δ 4.72-4.66 (m, 1H), 4.00-3.89 (m, 1H), 3.80-3.61 (m, 1H), 3.60-3.47 (m, 2H), 3.49-3.21 (m, 4H), 3.07-2.88 (m, 1H), 1.79-1.69 (m, 2H), 1.40 (s, 9H).
[0222] iv) (2S)-4-(tert-butoxycarbonyl)-1,4-oxazepane-2-carboxylic acid Sodium bromide (1.46 g) and TEMPO (218 mg) were added to a solution of (2S)-2-(hydroxymethyl)-1,4-oxazepane-4-tert-butyl carboxylate (13.2 g, 46.6 mmol) in acetone (730 mL) and saturated sodium bicarbonate (218 mL) at 0° C. 1,3,5-trichloro-1,3,5-triazinane-2,4,6-trione (23.9 g, 102.5 mmol) was added dropwise and the reaction mixture was allowed to warm to room temperature over 18 hours. The reaction was quenched by the addition of isopropanol (30 mL) and stirred for 30 minutes. The reaction mixture was filtered through Celite and washed with EtOAc. The filtrate was evaporated under reduced pressure, dissolved in 1M sodium carbonate solution (100 mL) and extracted with EtOAc (200 mL×2). The aqueous solution was acidified with 2M HCl (150 mL) and extracted with EtOAc (400 mL×3). The combined organic extracts were dried (magnesium sulfate), filtered and evaporated under reduced pressure to give the title compound as a colorless solid (7.86 g, 68%). 1H NMR (400 MHz, DMSO-d6): δ 12.71 (s, 1H), 4.22-4.15 (m, 1H), 3.98-3.80 (m, 2H), 3.70-3.50 (m, 2H), 3.45-3.11 (m, 1H), 3.21-3.06 (m, 1H), 1.71 (s, 2H), 1.40 (d, 9H).
[0223] Intermediate 3 (first alternative synthesis method) (2S)-4-(tert-butoxycarbonyl)-1,4-oxazepane-2-carboxylic acid i) (2S)-3-(dibenzylamino)-2-hydroxypropanoic acid methyl ester [ka] (S)-Methyl oxirane-2-carboxylate (117 g, 1134 mmol) and dibenzylamine (226 g, 1123 mmol) were heated at 70° C. overnight under a nitrogen atmosphere. Further (S)-methyl oxirane-2-carboxylate (1.15 g, 11.2 mmol) was added and stirred at 80° C. for 5 hours. The mixture was then left overnight at 50° C. under reduced pressure (0-10 mbar). This gave the desired product as a light brown viscous oil (342.7 g, 1145 mmol). 1 Assay by H NMR = 89% w / w, effective yield 91%. 1 H NMR (400 MHz, CDCl3): δ 2.77 - 2.92 (m, 2H), 3.13 - 3.4 (s, broad, 1H), 3.49 (d, J=13.5, 2H), 3.63 (s, 3H), 3.74 (d, J=13.5, 2H), 4.21 (dd, J=4.3, 6.7, 1H), 7.18 - 7.34 (m, 10H).
[0224] ii) 3-{[(2S)-3-(dibenzylamino)-1-methoxy-1-oxopropan-2-yl]oxy}prop-2-enoic acid methyl ester [ka] Methyl (2S)-3-(dibenzylamino)-2-hydroxypropanoate (342.7 g, 1018.8 mmol) was dissolved in toluene (200 mL). 4-Methylmorpholine (22.4 mL, 203.8 mmol) was added, followed by slow addition of methyl propiolate (108.8 g, 1273.6 mmol) over a period of 60 min. The reaction temperature was maintained between 20-25° C. throughout the addition by cooling in a water / ice bath. After stirring for 3 h, the mixture was concentrated to give the desired product as a brown viscous oil (447.6 g, 1167 mmol, Z / E isomer mixture). 1 H NMR assay = 87% w / w (contains both Z and E isomers). 1 H NMR (400 MHz, CDCl3): δ 2.9 - 3.02 (m, 2H), 3.53 (d, 2H), 3.64 (s, 3H), 3.66 (s, 2H), 3.70 (d, 2H), 4.41 (td, 1H), 4.86 (d, 0.08H), 5.20 (d, 0.92H), 6.33 (d, 0.08H), 7.16 - 7.34 (m, 11H), 7.43 (d, 0.92H). 13 C NMR (101 MHz, CDCl3): δ 51.13 (s), 52.30 (s), 54.64 (s), 58.92 (d, J = 5.6 Hz), 79.19 (s), 82.16 (s), 97.20 (s), 98.20 (s), 127.14 (s), 128.18 (d, J = 8.0 Hz), 128.88 (s), 138.54 (s), 138.88 (s), 156.76 (s), 161.01 (s), 167.59 (s), 169.04 (s).
[0225] iii) (2S)-3-amino-2-(3-methoxy-3-oxopropoxy)propanoic acid methyl ester [ka] Pd(OH)2 (20% charcoal, 50% water) (11.17 g, 79.50 mmol) was dried under a stream of nitrogen overnight. It was then suspended in 1,4-dioxane (200 mL) and then added to a solution of methyl 3-{[(2S)-3-(dibenzylamino)-1-methoxy-1-oxopropan-2-yl]oxy}prop-2-enoate (438 g, 994 mmol) dissolved in 1,4-dioxane (3800 mL). The mixture was hydrogenated overnight at 30° C. under 10 bar hydrogen pressure. The temperature was raised to 40° C. and the mixture was stirred for another 2 days. The mixture was filtered and rinsed with dioxane (200 mL). The dioxane solution (4527 g) was then used directly in the next step. Assay=4.6% w / w, effective yield 103%. 1 H NMR (400 MHz, CDCl3): δ 1.4 (s, 2H), 2.55 - 2.73 (m, 2H), 2.90 - 2.97 (dd, J=6.7, 13.5, 1H), 3.00 - 3.08 (dd, J=3.8, 13.5, 1H), 3.69 (s, 3H), 3.72 - 3.74 (m, 1H), 3.75 (s, 3H), 3.87 - 3.98 (ddd, 3.7, 6.3, 13.5, 2H).
[0226] iv) (2S)-5-oxo-1,4-oxazepane-2-carboxylate methyl [ka] To a crude solution of methyl (2S)-3-amino-2-(3-methoxy-3-oxopropoxy)propanoate (204 g, 994 mmol) in dioxane (4.2 L) was added Novozyme 435 (immobilized, 75 g). The mixture was stirred at 45° C. for 2 days. More Novozyme 435 (immobilized, 25 g) was added and the mixture was stirred for another 2 h. The temperature was increased to 55° C. and the mixture was stirred for 24 h. The mixture was filtered through a Celite filter, rinsed with MeOH, and then concentrated to give a soap-like solid (254 g). This was further purified by preparative HPLC to give 85.2 g (492 mmol) of the desired product as a colorless solid (>90% w / w, 1 1H NMR). 1 H NMR (400 MHz, CDCl3): δ 6.98, (1H, s), 4.19 (2H, m), 3.77 (3H,s), 3.69 (1H,m), 3.59 (2H,m), 2.83 (1H, ddd) and 2.63 (1H, dd).
[0227] v) (2S)-5-Oxo-1,4-oxazepane-2,4-dicarboxylate, 4-tert-butyl, 2-methyl [ka] To a mixture of methyl (2S)-5-oxo-1,4-oxazepane-2-carboxylate (152.5 g, 863.0 mmol), N,N-dimethylpyridin-4-amine (2.11 g, 17.3 mmol) and THF (1200 mL) was added di-tert-butyl dicarbonate (192 g, 863.0 mmol). The resulting yellow suspension was then stirred at 30° C. for 20 h. Further di-tert-butyl dicarbonate (11.30 g, 51.8 mmol) was added and the mixture was stirred at 30° C. for another 20 h. The mixture was concentrated to near dryness on a 37° C. water bath. MTBE (400 mL) was added and then concentrated to near dryness. This procedure was repeated once more to remove t-BuOH formed in the reaction. Finally, THF (300 mL) was added and then concentrated to give a yellow oil, which was used directly in the next step. Completion was deemed quantitative.1 H NMR (400 MHz, CDCl3): δ 1.48 (s, 9H); 2.77 (ddd, 1H, J = 16.1, 7.0, 1.9 Hz); 2.94 (ddd, 1H, J = 16.1, 9.3, 2.5 Hz); 3.75 (s, 3H); 3.80 (ddd, 1H, J = 12.9, 9.1, 2.0 Hz); 3.91 (dd, 1H, J = 16.0, 7.2 Hz); 4.12-4.30 (m, 2H); 4.38 (dd, 1H, J = 16.0, 1.4 Hz). 13 C NMR (126 MHz, CDCl3): δ 27.9, 42.3, 48.8, 52.6, 63.4, 77.5, 83.8, 152.1, 169.0, 172.6.
[0228] vi) (2S)-1,4-Oxazepane-2,4-dicarboxylate, 4-tert-butyl, 2-methyl [ka] To the crude mixture of 4-tert-butyl, 2-methyl (2S)-5-oxo-1,4-oxazepane-2,4-dicarboxylate (212.4 g, 777.2 mmol) from the previous step in THF (2 L) was added BH3-DMS solution (118 g, 1554 mmol) over a period of 30 min. The reaction temperature was maintained between 20-23° C. throughout the addition. The mixture was then stirred at 23° C. for 17 h. The mixture was slowly transferred to MeOH solution (1.5 L). The mixture was then combined with the crude material obtained in a small scale experiment (starting with 23.6 g of 4-tert-butyl, 2-methyl (2S)-5-oxo-1,4-oxazepane-2,4-dicarboxylate, using the procedure described above). The clear homogeneous solution was then stirred at 20° C. for 1 h, then concentrated to near dryness. MeOH (500 mL) was added, then concentrated to near dryness, and repeated once more. ACN (500 mL) was then added, then concentrated to near dryness, and repeated once more. The crude product (24% w / w, 1Determined by H NMR, internal standard: benzyl benzoate) stored as a solution in ACN (500 mL). Effective yield = 71%. 1 H NMR (400 MHz, MeOD, approximately 50:50 rotamer mixture): δ 1.51 (s, 9H); 1.84-1.93 (m, 2H); 3.20-3.34 (m, 1H); 3.42-3.56 (m, 1H); 3.70-3.81 (m, 5H); 4.02-4.12 (m, 2H); 4.36-4.41 (m, 1H). 13 C NMR (100.6 MHz, MeOD, approximately 50:50 rotamer mixture) δ 28.6, 31.0, 31.5, 47.8, 48.2, 51.0, 51.2, 52.6, 68.6, 68.7, 77.6, 77.8, 81.4, 81.6, 156.7, 156.9, 172.8, 172.9.
[0229] vii) (2S)-4-(tert-butoxycarbonyl)-1,4-oxazepane-2-carboxylic acid LiBr (375 g, 4319 mmol) was added to a mixture of ACN (700 mL), water (30 mL), TEA (187 g, 1851 mmol) and water (30 mL). Then, 4-tert-butyl, 2-methyl (2S)-1,4-oxazepane-2,4-dicarboxylate (160 g, 617 mmol) dissolved in ACN (200 mL) was added at a reaction temperature of 30° C. The mixture was stirred vigorously at 20° C. overnight. Most of the ACN was removed by concentration. MTBE (500 mL) was added to the residue. The yellow aqueous layer was washed with MTBE (200 mL). MTBE (400 mL) was then added to the aqueous layer, which was then acidified to about pH 2 using 2M KHSO4. The aqueous layer was extracted with MTBE (300 mL x 2), and the pooled organic layers were washed with water (100 mL), then concentrated to give a colorless solid (170 g, 80% w / w). The solid was suspended in 30% MTBE in heptane (600 mL) and the mixture was then stirred overnight. The mixture was filtered and the solid was washed with 25% MTBE in heptane (100 mL) and then dried under reduced pressure at 40° C. This gave 140.1 g (571 mmol) of the desired product ( 1 93% w / w by H NMR and 99.7% ee by HPLC). 1 H NMR (400 MHz, MeOD, mixture of two rotamers): δ 1.46 (s, 9H); 1.77-1.90 (m, 2H); 3.15-3.77 (m, 4H); 3.91-4.17 (m, 2H); 4.22-4.32 (m, 1H). 13 C NMR (100.6 MHz, MeOD, mixture of two rotamers) δ 28.5, 28.6, 31.0, 31.3, 47.8, 47.9, 51.4, 68.6, 69.0, 77.7, 78.0, 81.4, 81.7, 156.8, 157.0, 174.0, 174.2.
[0230] Intermediate 3 (2S)-4-(tert-butoxycarbonyl)-1,4-oxazepane-2-carboxylic acid (Second alternative synthesis method) i) 3-{benzyl[(2S)-3-(benzyloxy)-2-hydroxypropyl]amino}propan-1-ol [ka] The reactants, 1219 g (7.16 mol) of 3-(benzylamino)propan-1-ol and 1200 g (7.16 mol) of (S)-2-((benzyloxy)methyl)oxirane, were separately dissolved in 3 L each of 2-propanol and charged separately to inerted reactors and heated at 50° C. for 24 hours. The reaction mixture was evaporated at 60° C. and 110 mbar to give 2.48 kg of oil. The oil was dissolved in 1 L of toluene and evaporated to dryness. Yield: 2.45 kg, Assay: approx. 95%, Effective Yield: approx. 98%. 1H NMR (400 MHz, CDCl3): δ 1.59 - 1.78 (m, 2H), 2.47 (dd, J=13.3, 1H), 2.53 - 2.65 (m, 2H), 2.71-2.78 (ddd, 5.6, 7.7, 13.2, 1H), 3.31 - 3.45 (m, 3H), 3.50 (d, 1H), 3.67 - 3.74 (m, J=13.3, 3H), 3.93-3.99 (ddt, J=4.1,4.1,6.2, 8.3, 1H), 4.48 (s, 2H), 7.18 - 7.36 (m, 10H).
[0231] ii) 3-{benzyl[(2S)-3-(benzyloxy)-2-hydroxypropyl]amino}propyl methanesulfonate [ka] 147 g (446 mmol) of the diol product from the previous experiment was dissolved in 400 mL of DCM and cooled to -1°C. 72.3 mL (446 mmol) of DIPEA was added to the reactor at -1°C. The solution was cooled to -6°C. 51.1 g (446 mmol) of methanesulfonyl chloride in 200 mL of DCM was then added dropwise to the diol solution at about -6°C to -2°C for 1 hour. After addition, the mixture was stirred for 30 minutes and then poured onto 400 mL of ice. The phases were separated and washed twice with cold water, then twice with brine, and then evaporated to give an oil. The oil was diluted with DCM, extracted with aqueous sodium sulfate, filtered, and evaporated to give an oil, 176 g (97%) (assay 85%). 1 H NMR (600 MHz, CDCl3): δ 1.82-1.87 (m, 2H), 2.47 - 2.56 (m, 3H), 2.59 - 2.67 (m, 1H), 2.86 (s, 3H), 3.02 (s, 1H), 3.38 - 3.45 (m, 2H), 3.49 (d,1H), 3.69 (d, 1H), 3.83 - 3.87 (m, 1H), 4.14-4.20 (m, 2H), 4.49 (s, 2H), 7.20 - 7.32 (m, 10H).
[0232] iii) (2S)-4-benzyl-2-[(benzyloxy)methyl]-1,4-oxazepane [ka] 169g of the crude product from the previous experiment (assay about 85%, 143.65g, 0.35mol) was dissolved in 300mL dry THF and slowly (5h) added to NaH (1.4eq, 18.46g, 0.423mol) in 200mL dry THF (addition started after washing the sodium hydride paste with heptane) at 25°C in a dry reactor under nitrogen. The reaction mixture was stirred overnight at 25°C. The next day, 400mL of saturated aqueous bicarbonate solution was added to the reaction mixture at room temperature. Initially, gas was evolved. The phases were separated and the aqueous phase was discarded. The organic phase was evaporated to give an oil. The oil was dissolved in 400mL isopropyl acetate. The isopropyl acetate solution was washed with 100ml 2M NaOH(aq), then twice with water (100ml) and with brine. Evaporation gave 136 g of product (assay 65% w / w). Estimated yield: 88 g (81%) 0.28 mol. Chromatography: EtOAc / heptane 254 nm. Isolated yield: 81.6 g (0.26 mol, 74%) 1 H NMR (400 MHz, DMSO-d6): δ 1.66 - 1.76 (m, 1H), 1.77 - 1.87 (m, 1H), 2.37 (dd, 1H), 2.46 - 2.5 (m, 1H), 2.68 - 2.77 (m, 1H), 2.81 - 2.89 (m, 1H), 3.24 (dd, 1H), 3.37 (dd, 1H), 3.64 (d, 2H), 3.64 - 3.74 (m, 1H), 3.76 (ddd, 2H), 4.35 - 4.43 (m, 2H), 7.18 - 7.37 (m, 10H).
[0233] iv) (2S)-1,4-Oxazepan-2-ylmethanol [ka] 81.6 g (0.26 mol) of the product from the previous experiment was dissolved in 1 L of methanol and charged to a hydrogenation vessel under nitrogen. The catalyst PdOH2 (20%) (50% humidity)-10 g charcoal = 3 mol% was slurried in ethanol and charged to a reaction vessel under nitrogen. The mixture was hydrogenated at ambient temperature and 4.5 bar for 72 hours. About 50% conversion was achieved, 10 g fresh catalyst was added, the pressure was increased to 8 bar, and the temperature was increased from ambient to 45° C. Hydrogenation was continued overnight. About 96% conversion was achieved. 3 g catalyst was added to the reaction mixture and hydrogenation was continued for 6 hours. Complete conversion was achieved, the reaction mixture was filtered, and the sample was evaporated to give an oil. 1 H NMR (500 MHz, MeOD): δ 1.60-1.79 (m, 2H), 2.42 - 2.53 (dd,J=8.8, 14, 1H), 2.62-2.81 (dddd, J=4.2,7.3,13.5,49,2H), 2.81-2.89 (dd, 1H), 2.94 (dd, 1H), 3.17 (s, 1H), 3.24 - 3.37 (qd, J=5.6, 11.4, 11.4, 11.4, 2H), 3.41-3.48 (m, 1H), 3.53 (td, J=3.9, 7.9, 7.8, 1H), 3.74-3.84 (dt, J=5.5, 5.5, 12.2, 1H).
[0234] v) (2S)-2-(hydroxymethyl)-1,4-oxazepane-4-carboxylate tert-butyl [ka] A solution of the product from the previous experiment (ca. 0.26 mol) in methanol (ca. 1.2 L), after filtering off the catalyst, was treated with 54.3 g (0.25 mol) of Boc anhydride under CO2 (g) at room temperature to initiate direct formation. The reaction was left under nitrogen with stirring overnight. The reaction mixture was evaporated to dryness to give 59 g (98%) of a light yellow liquid. 1 H NMR (500 MHz, MeOD): δ 1.47 (s, 9H), 1.81-1.93 (qt, J=3.51, 3.51, 6.3, 6.3, 6.3, 2H), 3.03-3.16 (ddd, J=9.5, 14.4, 21.8, 1H), 3.29-3.32 (dt, J=1.6, 1.6, 3.3, 1H), 3.32 - 3.41 (m, 1H), 3.43 - 3.56 (m, 3H), 3.56 - 3.71 (m, 2H), 3.78 (dd, 1H), 4.07 (tq, 1H).
[0235] vi) (2S)-4-(tert-butoxycarbonyl)-1,4-oxazepane-2-carboxylic acid 52.5 g (assay 85%, 40.7 g) of tert-butyl (2S)-2-(hydroxymethyl)-1,4-oxazepane-4-carboxylate was dissolved in 300 mL of DCM. 0.5 g of TEMPO was dissolved in 100 mL of DCM. 3.88 g of tetrabutylammonium hydrogen sulfate was dissolved in 100 mL of DCM. These three DCM solutions were charged to a reaction vessel and 100 mL of water was added. 350 mL of 10-15% sodium hypochlorite solution was pH adjusted to about pH 8-9 with sodium bicarbonate (liquid + solid) (about 100 ml). 58 mL of 0.5 M solution of sodium bromide was added to the above buffered solution. The resulting aqueous solution was added dropwise to a two-phase system consisting of DCM mixture and water at 0° C. with stirring. The reaction was exothermic. Following the addition, a color change occurred (yellow to pale yellow). This color change indicates when the oxidant is consumed. After 10 minutes, the jacket was set to −5° C. to maintain the internal temperature at about 10° C. The addition was complete in 45 minutes and the reaction mixture was allowed to stand overnight. Workup: At room temperature, the off-white reaction mixture was pH adjusted to about pH 2-3 with about 40 g of potassium hydrogen sulfate, the phases were separated and the aqueous phase was washed with DCM (100 ml×3). The resulting DCM (800ml) solution was evaporated to give about 100g of oil. The oil was dissolved in 400ml of bicarbonate solution and extracted with DCM (75ml x 2). The remaining aqueous phase was acidified to pH 2-3 with about 35-40g of potassium hydrogen sulfate and extracted with DCM (75ml x 5). The DCM was evaporated to give 40.7g of white crystals; Yield: 40.7g, 85% yield based on assay of starting material. The product contained 10% water. Purification: The product was slurried with 200 mL of toluene and heated to 60° C. to form a solution. Approximately 100 mL of toluene was removed by evaporation and the acidic product began to crystallize at 60° C. The mixture was cooled to room temperature. The product was filtered and washed with toluene. The product was dried under reduced pressure. 1 H NMR (600 MHz, CDCl3): δ 1.46 (s, 9H), 1.93 (s, 2H), 3.23 (ddt, 1H), 3.33 - 3.78 (m, 3H), 3.95 - 4.38 (m, 3H), 9.91(s,1H).
[0236] Intermediate 4 (2S)-2-{[(2S)-1-amino-3-(4-iodophenyl)-1-oxopropan-2-yl]carbamoyl}-1,4-oxazepane-4-carboxylate tert-Butyl To T3P (25 g, 39.3 mmol, 50% solution in DMF) in DMF (200 mL) was added (2S)-4-(tert-butoxycarbonyl)-1,4-oxazepane-2-carboxylic acid (intermediate 3, 7.9 g, 32.2 mmol) and (S)-2-amino-3-(4-iodophenyl)propanamide (9.0 g, 32.2 mmol, prepared according to the procedure of WO 2009 / 074829, p. 45). TEA (25 mL, 180.3 mmol) was added and the reaction was stirred at room temperature for 4 hours. The reaction mixture was then concentrated under reduced pressure. The resulting oil was dissolved in EtOAc and washed successively with 2M aqueous hydrochloric acid, saturated aqueous sodium bicarbonate and sodium chloride solutions. The organic extract was dried (magnesium sulfate), filtered and concentrated in vacuo to give the title compound as a yellow foamy oil (13.1 g, 79%) which was used in the next step without further purification.
[0237] Intermediate 5 (2S)-2-{[(1S)-1-cyano-2-(4-iodophenyl)ethyl]carbamoyl}-1,4-oxazepane-4-carboxylate tert-Butyl To a solution of tert-butyl (2S)-2-{[(2S)-1-amino-3-(4-iodophenyl)-1-oxopropan-2-yl]carbamoyl}-1,4-oxazepane-4-carboxylate (Intermediate 4, 8.86 g, 17.13 mmol) in DCM (740 mL) was added Burgess reagent (8.16 g, 34.27 mmol). After stirring the reaction mixture at room temperature for 24 hours, the reaction was transferred to a separatory funnel and washed with water. The organic extract was dried (phase separator cartridge) and concentrated under reduced pressure. The resulting solid was purified by silica gel column chromatography eluting with 25% EtOAc in isohexane to give a yellow oil. Trituration with diethyl ether gave the title compound as an off-white solid (6.05 g, 71%). 1H NMR (400 MHz, CDCl3): δ 7.66 (d, 2H), 6.98 (m, 3H), 5.06 (s, 1H), 4.22-3.92 (m, 3H), 3.70 (m, 0.5H), 3.54-3.20 (m, 2.5H), 3.09-2.89 (m, 3H), 1.88 (s, 2H), 1.42 (s, 9H).
[0238] Intermediate 6 (2S)-2-[[(1S)-2-Amino-2-oxo-1-[[4-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)phenyl]methyl]ethyl]carbamoyl]-1,4-oxazepane-4-carboxylate tert-Butyl To a stirred solution of tert-butyl (2S)-2-{[(2S)-1-amino-3-(4-iodophenyl)-1-oxopropan-2-yl]carbamoyl}-1,4-oxazepane-4-carboxylate (Intermediate 4, 0.5 g, 0.97 mmol) in dry DMSO (2.5 mL) under nitrogen was added Pin2B2 (0.32 g, 1.26 mmol), potassium acetate (0.28 g, 2.9 mmol) and Pd(dppf)Cl2·DCM (0.039 g, 5 mol%). The reaction was heated at 85° C. for 5 h and left at room temperature overnight. Water (15 mL) was added and the mixture was extracted with EtOAc (50 mL×2). The combined extracts were washed with saturated sodium chloride (20 mL), dried (magnesium sulfate) and evaporated under reduced pressure. The resulting oil was purified by silica gel column chromatography eluting with EtOAc to give the title compound as a colorless oil (0.3 g, 60%). 1H NMR (400 MHz, CDCl3): δ 7.75 (d, 2H), 7.28-7.21 (m, 2H), 5.30 (s, 1H), 4.60 (m, 1H), 4.18-3.98 (m, 2H), 3.51-3.42 (m, 1H), 3.12 (t, 2H), 2.80 (s, 1H), 2.05 (s, 2H), 1.88 (s, 1H), 1.60 (s, 4H), 1.54-1.33 (m, 6H), 1.40-1.16 (m, 12H) (three exchangeable protons not observed).
[0239] Working Example
[0240] Example 1 (2S)-N-[(1S)-1-cyano-2-(4'-cyanobiphenyl-4-yl)ethyl]-1,4-oxazepane-2-carboxamide [ka] i) (2S)-2-{[(1S)-1-cyano-2-(4'-cyanobiphenyl-4-yl)ethyl]carbamoyl}-1,4-oxazepane-4-carboxylate tert-butyl ester To a solution of (2S)-4-(tert-butoxycarbonyl)-1,4-oxazepane-2-carboxylic acid (Intermediate 3, 0.294 g, 1.2 mmol) in DCM (15 mL) was added 2-pyridinol-1-oxide (0.155 g, 1.4 mmol), TEA (0.36 g, 3.6 mmol) and 1-ethyl-3-(3-dimethylaminopropyl)carbodiimide hydrochloride (0.268 g, 1.4 mmol). After 20 min, 4'-[(2S)-2-amino-2-cyanoethyl]biphenyl-4-carbonitrile (Intermediate 1, 0.296 g, 1.2 mmol) was added and the mixture was stirred for 3 h and left at room temperature for 18 h. The mixture was heated at 40° C. for 4 h before water (15 mL) was added. After 10 min, the DCM was dried (phase separator cartridge) and evaporated under reduced pressure. The resulting yellow oil was purified by silica gel column chromatography to give the sub-title compound (0.29 g, 52%) which was used in the next step without further purification.
[0241] ii) (2S)-N-[(1S)-1-cyano-2-(4'-cyanobiphenyl-4-yl)ethyl]-1,4-oxazepane-2-carboxamide The preparation was performed according to the procedure in step ii) of Method A using tert-butyl (2S)-2-{[(1S)-1-cyano-2-(4'-cyanobiphenyl-4-yl)ethyl]carbamoyl}-1,4-oxazepane-4-carboxylate to give the title compound as a white solid (60 mg, 28%). 1 H NMR (400 MHz, CDCl3): δ 7.77-7.65 (m, 4H), 7.62-7.57 (m, 2H), 7.40 (d, 2H), 7.11 (d, 1H), 5.18-5.11 (m, 1H), 4.19-4.14 (m, 1H), 4.06-3.96 (m, 2H), 3.75-3.69 (m, 1H), 3.56-3.48 (m, 2H), 3.18-3.05 (m, 3H), 2.95-2.90 (m, 1H), 2.70 (ddd, 1H) (one exchangeable proton not observed). LCMS (10cm_ESCI_Formic_MeCN) t R 2.57 (min) m / z 375 (MH + ).
[0242] Example 2 (2S)-N-{(1S)-1-cyano-2-[4-(3-methyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide [ka]
[0243] i) (2S)-2-({(1S)-1-cyano-2-[4-(3-methyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]ethyl}carbamoyl)-1,4-oxazepane-4-carboxylate tert-butyl ester [ka] To a solution of (2S)-4-(tert-butoxycarbonyl)-1,4-oxazepane-2-carboxylic acid (Intermediate 3, 490 mg, 2.0 mmol) in DCM (15 mL) was added N-(3-dimethylaminopropyl)-N'-ethylcarbodiimide hydrochloride (468 mg, 2.44 mmol) and 2-pyridinol 1-oxide (271 mg, 2.44 mmol). The reaction was stirred at room temperature for 30 minutes, after which (2S)-2-amino-3-[4-(3-methyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]propanenitrile (Intermediate 2, 586 mg, 2.0 mmol) and DiPEA (1.79 mL, 10 mmol) were added. The reaction was stirred at room temperature for 18 hours and then transferred to a separatory funnel. The mixture was washed with 2M hydrochloric acid, saturated sodium bicarbonate solution and brine. The organic extracts were passed through a hydrophobic frit / phase separator and concentrated under reduced pressure. The crude material was purified by silica gel column chromatography eluting with 0-60% EtOAc in isohexane to give the sub-title compound as an oil (457mg, 44%). 1 H NMR (400 MHz, CDCl3): δ 7.63-7.52 (m, 2H), 7.38 (d, 2H), 7.36-7.24 (m, 2H), 7.35-6.98 (m, 2H), 5.18 (t, 1H), 4.22-3.97 (m, 2H), 3.76-3.67 (m, 0.5H), 4.10-2.94 (m, 4.5H), 3.35-3.26 (m, 1H), 3.24-3.04 (m, 3H), 2.06-1.82 (m, 2H), 1.47 (s, 10H).
[0244] ii) (2S)-N-{(1S)-1-cyano-2-[4-(3-methyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide tert-Butyl (2S)-2-({(1S)-1-cyano-2-[4-(3-methyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]ethyl}carbamoyl)-1,4-oxazepane-4-carboxylate (457 mg, 0.85 mmol) was dissolved in formic acid (3 mL) and heated at 50° C. on a preheated hotplate stirrer for 10 minutes. The reaction was then concentrated under reduced pressure, dissolved in DCM and washed with saturated sodium bicarbonate solution. The organic extract was passed through a hydrophobic frit / phase separator and concentrated under reduced pressure. The resulting foam was purified by silica gel column chromatography eluting with 0-5% methanolic ammonia (7N) in DCM to give the title compound as a solid material (230 mg, 64%). 1 H NMR (400 MHz, CDCl3): δ 7.59-7.51 (m, 2H), 7.39 (dd, 2H), 7.33-7.23 (m, 3H), 7.14 (d, 1H), 5.23-5.12 (m, 1H), 4.12-4.06 (m, 1H), 4.05-3.95 (m, 1H), 3.81-3.71 (m, 1H), 3.46 (s, 3H), 3.34-3.26 (m, 1H), 3.19-3.00 (m, 3H), 2.99-2.82 (m, 2H), 1.92-1.77 (m, 2H) (one exchangeable proton not observed). LCMS (10cm_ESCI_Formic_MeCN) t R 2.48 (min) m / z 375 (MH + ).
[0245] Example 2 (alternative synthesis method) (2S)-N-{(1S)-1-cyano-2-[4-(3-methyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide i) 5-Chloro-1,3-benzoxazol-2(3H)-one [ka] CDI (497 g, 3.07 mol) was added to a solution of 2-amino-4-chlorophenol (400 g, 2.79 mol) in 2-MeTHF (6 L) under N2 (exotherm 11.0°C to 22.0°C). The reaction mixture was heated at reflux for 1 h. The mixture was cooled to room temperature and washed with 2M HCl(aq) (6 L), 8% NaHCO3(aq) (6 L) and brine (3 L). The organic layer was dried over MgSO4, filtered and evaporated. This gave the product as a light brown solid (456.1 g, 97% yield, LC purity >99%). 1 H NMR (270 MHz, DMSO-d6): δ 12.0-11.5 (brs, 1H), 7.31 (d, 1H), 7.12 (m, 2H). LCMS (5cm_ESCI, aq. formic acid_metanol) t R 3.87 (min) m / z 169.8 (MH + ).
[0246] ii) 5-chloro-3-methyl-1,3-benzoxazol-2(3H)-one [ka] To a solution of 5-chloro-1,3-benzoxazol-2(3H)-one (step i)) (1111.8 g, 6.56 mol) in DMF (4.12 L) was added Cs2CO3 (2136.4 g, 6.56 mol) while maintaining the temperature at 0-5 °C. Then, MeI (450 ml, 7.21 mol) was added slowly while maintaining the temperature at 0-5 °C. The reaction mixture was allowed to warm to room temperature and stirred overnight. The mixture was cooled to 0-5 °C and H2O (4.12 L) was added slowly. Then, the reaction mixture was allowed to warm to room temperature and stirred for 15 min. The solid was filtered and washed with water (980 ml x 4). The filter cake was dried in vacuum at 55 °C overnight (1149.9 g, 96% yield, LC purity >99%, H2O: (Karl Fischer) 0.1%). 1H NMR (270 MHz, DMSO-d6): δ 7.45 (d, 1H), 7.35 (d, 1H), 7.15 (dd, 1H), 3.35 (s, 3H). LCMS (5cm_ ESCI_aq. formic acid_methanol) t R 4.13 (min) m / z 183.8 (M + ).
[0247] iii) 3-Methyl-5-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-1,3-benzoxazol-2(3H)-one [ka] A solution of 5-chloro-3-methyl-1,3-benzoxazol-2(3H)-one (step ii)) (350 g, 1.91 mol), B2pin2 (581.0 g, 2.29 mol) and KOAc (561.3 g, 5.72 mol) was degassed under vacuum and purged with N2 (x3). Pd(OAc)2 (12.9 g, 57.2 mmol) and XPhos (54.6 g, 114 mmol) were added and the mixture was degassed under vacuum and purged with N2 (x3). The mixture was heated to 75°C. A large exotherm was observed at about 70°C, which caused the mixture to warm to reflux (100°C). The reaction mixture was stirred without heating for 1 h. HPLC analysis showed that 2.5% starting material remained, so the mixture was heated at 85°C for 1 h. No further changes were observed at this stage. Further B2pin2 (14.6 g, 57.2 mmol), KOAc (5.7 g, 57.2 mmol), Pd(OAc)2 (12.9 g, 57.2 mmol) and XPhos (27.3 g, 57.2 mmol) were added and the mixture was stirred at 75° C. for 1 h. HPLC analysis showed no starting material remained. The mixture was cooled to room temperature and filtered through a pad of Celite (501 g) and the cake was washed with EtOAc (2240 ml). The filtrate was combined with another two batches (350 g×2) prepared in the same way and evaporated. This gave 1865.1 g of product as a grey solid (yield 97%, purity by LC 90.0%, 1 Purity 82±2% by H NMR (DMSO-d6) assay vs TCNB. 1H NMR (270MHz, DMSO-d6): δ 7.40-7.50 (m, 2H), 7.30 (d, 1H), 3.40 (s, 3H), 1.30 (s, 12H). LCMS (5cm_ ESCI_aq. formic acid_methanol_) t R 4.91 (min) m / z 276.1 (MH + ).
[0248] iv) Nα-(tert-butoxycarbonyl)-4-(3-methyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)-L-phenylalaninamide [ka] To a suspension of 5-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-1,3-benzoxazol-2(3H)-one (step iii)) (859 g, 700 g active, 2.544 mol) and (S)-1-carbamoyl-2-(4-iodophenyl)ethylcarbamate tert-butyl (prepared according to the procedure on page 47 of WO 2009 / 074829) (903 g, 2.313 mol) in dioxane (4.1 L) was added 2M K2CO3 (2.3 L). The suspension was degassed in vacuum and purged with N2 (x3). Pd(dppf)Cl2·DCM (28.33 g, 0.0347 mol) was added and the reaction mixture was heated at 75° C. for 3 h. The mixture was cooled to room temperature and diluted with water (6.4 L). The suspension was stirred at room temperature overnight; the solid was filtered and washed with water (1 L x 3). The product was dried at 45°C for 3 days (1269.1 g, 1 133% yield by H NMR - containing pinacol related impurities and dioxane, LC purity 94.3%, HO:(Karl Fischer) 3.35%). 1 H NMR (270 MHz, DMSO-d6): δ 7.62-7.34 (m, 7H), 7.04 (brs, 2H), 6.86 (d, 1H) 4.12 (m, 1H), 3.40 (s, 3H), 3.00 (dd, 1H), 2.78 (dd, 1H), 1.30 (s, 9H). LCMS (5cm_ESI_Water_MeCN) R 4.51 (min) m / z 312 (MH + ).
[0249] v) 4-(3-methyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)-L-phenylalaninamide [ka] To a very thick suspension of Nα-(tert-butoxycarbonyl)-4-(3-methyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)-L-phenylalaninamide (step iv)) (1269 g, activity 952 g, 2.3138 mol, estimated 100% conversion in step iv) in DCM (2.1 L) was added 4.1 M HCl in dioxane (2.7 L, 11.06 mol) dropwise over 1 h, maintaining the temperature at about 15° C. (the suspension became more mobile after the addition of about 0.5 L of 4.1 M HCl in dioxane). After 2 h, the mixture was diluted with water (5.6 L) and stirred at room temperature for 30 min. The mixture was then filtered through a pad of Celite (500 g) to remove undissolved material - very slow filtration; the Celite was checked for product by LC. The pad was washed with water (400 ml). The layers were separated into DCM / dioxane-water. The aqueous layer was cooled to about 5° C. and 35% NH3(aq) (700 ml) was added slowly to reach pH=9-10. The suspension was stirred overnight, then the product was filtered and washed with water (400 ml×3). The product was dried under vacuum at 45° C. (off-white solid, 489.4 g, 68% yield over two steps, 99.4% purity by LC, >99% EP, 1 Purity 98 ± 2% by H NMR assay vs TCNB in DMSO, HO: (Karl Fischer) 0.92%). 1 H NMR (270 MHz, DMSO-d6): δ 7.59-7.30 (m, 7H), 6.98 (brs, 1H), 3.36 (m, 4H), 2.95 (dd, 1H), 2.67 (dd, 1H) 1.86 (brs, 2H). LCMS (5cm_ESI_Water_MeCN) R 2.76 (min) m / z 312 (MH + ).
[0250] vi) (2S)-2-({(1S)-1-cyano-2-[4-(3-methyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]ethyl}carbamoyl)-1,4-oxazepane-4-carboxylate tert-butyl ester [ka] To a solution of 4-(3-methyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)-L-phenylalaninamide (step v)) (756 g, active 733 g, 2.354 mol) and (2S)-4-(tert-butoxycarbonyl)-1,4-oxazepane-2-carboxylic acid (577 g, 2.354) (intermediate 3) in DMF (3 L) was added DiPEA (1230 ml, 7.062 mol) under N2. T3P in DMF (50% w / w, 1924 ml, 3.296 mol) was added dropwise over 1.5 hours while maintaining the temperature at <25°C. After 30 minutes, an LC completion check indicated the coupling reaction was complete. DiPEA (1230 ml, 7.062 mol) was then added and the reaction mixture was heated to 50°C. T3P in DMF (50% w / w, 3986 ml, 6.827 mol) was added dropwise over 1 h (no exotherm was observed). The reaction mixture was stirred at 50° C. for 4 h and then at room temperature overnight. The mixture was cooled to 10° C. and diluted with 2-MeTHF (4 L) and water (5.6 L, exothermic). The layers were separated and the aqueous layer was extracted with 2-MeTHF (4 L×2). The combined organic extracts were dried over MgSO4, filtered and concentrated under reduced pressure. This gave the product as a light brown solid in 98% yield (1242 g (1205 g active), corrected yield 98%, LC purity 98.4%, 1 H NMR assay vs TCNB 97±2%, 1 Major impurities by H NMR: 2-MeTHF 1.9%, DMF 0.6%).
[0251] vii) (2S)-N-{(1S)-1-cyano-2-[4-(3-methyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide A solution of (2S)-2-({(1S)-1-cyano-2-[4-(3-methyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]ethyl}carbamoyl)-1,4-oxazepane-4-tert-butyl carboxylate (step vi)) (1776 g, activity 1671 g, 3.210 mol) in formic acid / water (4.2 L / 440 ml) was stirred at 35-37° C. under reduced pressure (300-500 mbar) on a buchi. After 3 hours, LCMS completion check showed 93.95% product and 0.5% starting material. The mixture was concentrated (4 hours) to give an oily residue. The residue was dissolved in water (4.4 L) and washed with TBME (2.2 L). The aqueous layer was stirred vigorously and treated with NH3(aq) (1.8 L) at <25°C to reach pH=9-10. The mixture was stirred at room temperature for 3 h. The solid was filtered and washed with water (1 L x 3). The filter cake was dried at 45°C overnight. This gave the product as a light brown solid (1498 g, activity 1333 g, LC 91.5%, 1 H NMR assay vs TCNB 89±2%, HO:(Karl Fischer) 4.63%).
[0252] The crude product was recrystallized from EtOH / H2O in two batches (747g x 2). Batch A: The crude product (747 g) was dissolved in EtOH (8 L) under reflux under N2. Water (1.6 L) was added slowly. The mixture was hot filtered (65° C.) to remove black particles (filtrate temperature 50° C.), then stirred at 40° C. overnight. The suspension was cooled to 10° C. over 4 hours and kept at this temperature for 3 hours. The product was filtered and washed with EtOH / H2O (8:2, 500 ml×3) and then with water (500 ml×3). The filter cake was dried at 45° C. overnight (473 g, purity 97.7% by LC, Pd level 71.4 ppm). Batch B gave 436 g of product (95.8% purity by LC, Pd level 65.8 ppm). The liquid from both batches was combined and concentrated to about 8 L. The liquid was left at room temperature overnight. The solid was filtered and washed with EtOH / H2O (8:2, 400 ml x 3), then with water (400 ml x 3). The product was dried at 45°C overnight. This gave an additional 88 g of product (LC purity 95.0%).
[0253] The products (LC purity of the blend 95.69%) were recrystallized from EtOH / H2O in two batches (Batch C: 520 g, Batch D: 520 g). Batch C: The crude product (520 g) was dissolved in EtOH (6.24 L) at reflux under N2. Water (1248 ml) was added slowly. The mixture was cooled to 40° C. (3 h), seeded with 0.5 g of the title compound and stirred at 40° C. for 10 h. The mixture was then cooled to 26° C. over 7 h. The resulting suspension was cooled to 10° C. and stirred at that temperature for 6 h. The product was filtered and washed with EtOH / water (8:2, 500 ml×3) and water (500 ml×3). The filter cake was dried at 45° C. for 2 days. The product was obtained as a grey solid (418 g, approx. 56% yield, LCMS purity 97.5%, chiral LC 100%, 1 H NMR (DMSO-d6) assay vs TCNB 100±2%). Batch D: 418g, yield approx. 56%, LCMS purity 97.5%, chiral LC 100%, 1 H NMR (DMSO-d6) assay vs TCNB 100±2%
[0254] These products were blended with material from an intermediate scale reaction carried out in the same manner and reanalyzed (968 g, LC purity 98.04%, chiral LC 100%, 1 H NMR assay vs TCNB 99±2%, 1 0.35% EtOH, HO:(Karl Fischer) 4.58% by H NMR, Pd 57.6 ppm, XRPD (X-ray powder diffraction) Form A.
[0255] [Table 2] [Table 3]
[0256] Example 2. Preparation of Crystalline Form B (2S)-N-{(1S)-1-cyano-2-[4-(3-methyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide, Form A (5 g), prepared by the method described above, was charged to a reaction vessel. Acetone (35 ml) was added and the mixture was heated in a heating block at 60-65° C. The heating block was turned off and the resulting solution was allowed to cool to room temperature. The resulting suspension was filtered and the filtrate was dried in a vacuum oven at 40° C. and ≦600 mbar overnight. XRPD (X-ray powder diffraction), Form B.
[0257] [Table 4] [Table 5]
[0258] Example 2. Preparation of Crystalline Form C (2S)-N-{(1S)-1-cyano-2-[4-(3-methyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide, Form A (50 mg) prepared by the method described above was loaded into a 1.5 mL scintillation vial. Propan-2-ol (1 ml) was added and the mixture was placed in an orbital shaker equipped with a heating block at 40° C. for 1 day. The resulting suspension was filtered and the filtrate was dried. XRPD (X-ray powder diffraction), Form C.
[0259] [Table 6] [Table 7]
[0260] Example 2. Preparation of Xinafoate Salt, Crystalline Form A (2S)-N-{(1S)-1-cyano-2-[4-(3-methyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide, Form A (100 mg) prepared by the method described above was loaded into a 1.5 mL scintillation vial. Approximately 48 mg of 1-hydroxy-2-naphthoic acid was added. Subsequently, 1.5 mL of ACN and 0.03 mL of water were added, and the mixture was stirred at room temperature for approximately 6 hours using a magnetic stir bar. The vial was closed during this stirring. The resulting suspension was centrifuged at 7500 rpm for 5 minutes, and the supernatant was removed with a Pasteur pipette. The moist solid residue was dried in a vacuum oven at 30° C. and 30 mbar for approximately 60 hours. XRPD (X-ray powder diffraction), xinafoate salt, Form A.
[0261] [Table 8] [Table 9]
[0262] Example 2. Preparation of R-Mandelate Salt, Crystal Form A (2S)-N-{(1S)-1-cyano-2-[4-(3-methyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide, Form A (120 mg), prepared by the method described above, was loaded into a 1.5 mL scintillation vial. Approximately 45 mg of R-(-)-mandelic acid was added. Subsequently, 1.5 mL of ACN and 0.04 mL of water were added, and the mixture was stirred at room temperature using a magnetic stir bar for approximately 6 hours. The vial was closed during this stirring. The resulting suspension was centrifuged at 7500 rpm for 5 minutes, and the supernatant was removed with a Pasteur pipette. The moist solid residue was dried in a vacuum oven at 30° C. and 30 mbar for approximately 60 hours. XRPD (X-ray powder diffraction), R-mandelic acid salt, Form A.
[0263] [Table 10] [Table 11]
[0264] Example 3 (Method A) (2S)-N-{(1S)-1-cyano-2-[4-(3,7-dimethyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide [ka] i) (2S)-2-({(1S)-1-cyano-2-[4-(3,7-dimethyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]ethyl}carbamoyl)-1,4-oxazepane-4-carboxylate tert-butyl ester 5-(5,5-Dimethyl-1,3,2-dioxaborinan-2-yl)-3,7-dimethyl-1,3-benzoxazol-2(3H)-one (boronic ester 1, 154 mg, 0.56 mmol) and tert-butyl (2S)-2-{[(1S)-1-cyano-2-(4-iodophenyl)ethyl]carbamoyl}-1,4-oxazepane-4-carboxylate (intermediate 5, 266 mg, 0.53 mmol) were dissolved in ACN (13 mL) and water (0.5 mL). Potassium carbonate (110 mg, 0.80 mmol) was added and the reaction mixture was degassed for 20 min, followed by the addition of Pd(dppf)Cl2·DCM (43 mg, 0.053 mmol). The reaction mixture was heated at 80° C. for 90 min. The reaction was then concentrated in vacuo and purified by silica gel column chromatography eluting with a gradient of 0-80% EtOAc in isohexane to afford the sub-title compound as a pale brown solid (242 mg, 85%). 1 H NMR (400 MHz, CDCl3): δ 7.55 (d, 2H), 7.36 (d, 2H), 7.16-7.02 (m, 3H), 6.96 (s, 1H), 5.16 (s, 1H), 4.17-4.00 (m, 3H), 3.56-3.48 (m, 1H), 3.53-3.36 (m, 3H), 3.21-3.12 (m, 2H), 2.44 (s, 3H), 1.95 (d, 2H), 1.47 (s, 9H), 0.94-0.87 (m, 2H).
[0265] ii) (2S)-N-{(1S)-1-cyano-2-[4-(3,7-dimethyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide Tert-butyl (2S)-2-({(1S)-1-cyano-2-[4-(3,7-dimethyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]ethyl}carbamoyl)-1,4-oxazepane-4-carboxylate (240 mg, 0.45 mmol) was dissolved in formic acid (3 mL) and heated at 50° C. on a preheated hotplate stirrer for 10 min. The reaction was then concentrated under reduced pressure, dissolved in DCM and washed with saturated sodium bicarbonate solution. The organic extract was dried (phase separator cartridge) and concentrated under reduced pressure. The solid was purified by silica gel column chromatography eluting with 0-2% methanolic ammonia (7N) in DCM to give the title compound as a white solid (54 mg, 27%). 1 H NMR (400 MHz, DMSO-d6): δ 8.62 (d, 1H), 7.65 (d, 2H), 7.38 (d, 3H), 7.28 (s, 1H), 5.03 (q, 1H), 4.00 (dd, 1H), 3.90-3.82 (m, 1H), 3.73 (ddd, 1H), 3.39 (s, 3H), 3.32 (s, 3H), 3.24-3.13 (m, 2H), 3.04 (dd, 1H), 2.82-2.74 (m, 1H), 2.38 (s, 2H), 1.80-1.68 (m, 2H) (one exchangeable proton not observed). LCMS (10cm_ESCI_Formic_MeCN) t R 2.58 (min) m / z 435 (MH + ).
[0266] Example 4 (Method B) 4'-[(2S)-2-cyano-2-{[(2S)-1,4-oxazepan-2-ylcarbonyl]amino}ethyl]biphenyl-3-yl methanesulfonate [ka] i) (2S)-2-{[(2S)-1-amino-3-{3'-[(methylsulfonyl)oxy]biphenyl-4-yl}-1-oxopropan-2-yl]carbamoyl}-1,4-oxazepane-4-carboxylate tert-butyl ester (2S)-2-[[(1S)-2-amino-2-oxo-1-[[4-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)phenyl]methyl]ethyl]carbamoyl]-1,4-oxazepane-4-carboxylate tert-butyl, 2-({(2S)-1-amino-1-oxo-3-[4-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)phenyl]methyl]ethyl]carbamoyl]-1,4-oxazepane-4-carboxylate tert-butyl A suspension of tert-butyl (3-iodophenyl)propan-2-yl}carbamoyl)-1,4-oxazepane-4-carboxylate (Intermediate 6, 0.21 g, 0.4 mmol), (3-iodophenyl)methanesulfonate (0.13 g, 0.44 mmol) and potassium carbonate (0.16 g, 1.2 mmol) in ACN (30 mL) and water (1.2 mL) was degassed under nitrogen for 10 min. Pd(dppf)Cl2·DCM complex (0.032 g, 10 mol%) was added and the reaction mixture was heated at 80 °C for 120 min. The solvent was removed under reduced pressure and the residue was treated with water (20 mL) and DCM (25 mL). The DCM was dried (phase separation cartridge) and evaporated under reduced pressure to give the subtitle compound as a dark brown glass (0.24 g, >100%). 1 H NMR (400 MHz, CDCl3): δ 7.54-7.43 (m, 5H), 7.35-7.19 (m, 3H), 5.58 (m, 1H), 4.71 (s, 1H), 4.21-3.94 (m, 3H), 3.81-3.76 (m, 1H), 3.52-3.44 (m, 3H), 3.23-3.14 (m, 4H), 2.80 (s, 1H), 2.20-1.54 (m, 1H), 1.45 (s, 9H) (three exchangeable protons not observed).
[0267] ii) (2S)-2-{[(1S)-1-cyano-2-{3'-[(methylsulfonyl)oxy]biphenyl-4-yl}ethyl]carbamoyl}-1,4-oxazepane-4-carboxylate tert-butyl To a stirred solution of tert-butyl (2S)-2-{[(2S)-1-amino-3-{3'-[(methylsulfonyl)oxy]biphenyl-4-yl}-1-oxopropan-2-yl]carbamoyl}-1,4-oxazepane-4-carboxylate (0.24 g) in DCM (20 mL) was added Burgess reagent (0.11 g, 0.046 mmol). After 3 days, further reagent (0.11 g, 0.046 mmol) was added and stirring continued for 6 h. The reaction was left overnight and then washed with water (20 mL). The organic extract was dried (phase separation cartridge) and evaporated under reduced pressure. The residue was purified by silica gel column chromatography eluting with 0-100% EtOAc in isohexane to give the subtitle compound as a colourless glass (0.18 g, 83% over two steps). 1 H NMR (400 MHz, CDCl3): δ 7.61-7.45 (m, 5H), 7.38 (m, 3H), 7.06 (s, 1H), 5.17 (s, 1H), 4.20-3.99 (m, 2H), 3.75-3.63 (m, 1H), 3.57-3.37 (m, 3H), 3.49-2.85 (m, 3H), 1.94 (s, 2H), 1.57 (s, 1H), 1.51-1.35 (m, 9H), 1.33 (s, 1H) (one exchangeable proton not observed).
[0268] iii) 4'-[(2S)-2-cyano-2-{[(2S)-1,4-oxazepan-2-ylcarbonyl]amino}ethyl]biphenyl-3-yl methanesulfonate A solution of tert-butyl (2S)-2-{[(1S)-1-cyano-2-{3'-[(methylsulfonyl)oxy]biphenyl-4-yl}ethyl]carbamoyl}-1,4-oxazepane-4-carboxylate (0.18 g, 0.33 mmol) in formic acid (3 mL) was heated at 50° C. for 15 min. The mixture was evaporated under reduced pressure. The residue was dissolved in DCM (20 mL) and stirred with saturated sodium bicarbonate (30 mL). The layers were separated and the organic extract was dried (phase separation cartridge) and evaporated under reduced pressure. The residue was purified by silica gel column chromatography eluting with 2% 7N methanolic ammonia in DCM. The resulting solid was recrystallized from 1:1 diisopropyl ether:EtOAc to give the title compound as a colorless solid (50 mg, 34%). 1 H NMR (400 MHz, CDCl3): δ 7.61-7.46 (m, 5H), 7.40 (dd, 2H), 7.38-7.18 (m, 1H), 7.18 (d, 1H), 5.23-5.12 (m, 1H), 4.12-4.06 (m, 1H), 4.05-3.95 (m, 1H), 3.81-3.71 (m, 1H), 3.35-3.26 (m, 1H), 3.22-3.09 (m, 4H), 3.07-2.81 (m, 3H), 1.91-1.77 (m, 2H) (two exchangeable protons not observed). LCMS (10cm_ESCI_Bicarb_MeCN) t R 2.75 (min) m / z 444 (MH + ).
[0269] Examples 5 to 33 Using the methods and intermediates described above, the following compounds were prepared: [ka] [Table 12-1] [Table 12-2]
Table 12-3
Table 12-4
Table 12-5
Table 12-6
Table 12-7
Table 12-8
Table 12-9
Table 12-10
Table 12-11
Table 12-12
Table 12-13
Table 12-14
[0270] Example 34 Diastereomeric mixture of (2S)-N-[(1S)-1-cyano-2-(4'-cyanobiphenyl-4-yl)ethyl]-1,4-oxazepane-2-carboxamide and (2R)-N-[(1S)-1-cyano-2-(4'-cyanobiphenyl-4-yl)ethyl]-1,4-oxazepane-2-carboxamide [ka] i) tert-Butyl 2-{[(1S)-1-cyano-2-(4'-cyanobiphenyl-4-yl)ethyl]carbamoyl}-1,4-oxazepane-4-carboxylate To T3P (700 mg, 50% solution in DMF) in DMF (2 mL) was added rac-4-(tert-butoxycarbonyl)-1,4-oxazepane-2-carboxylic acid (248 mg, 1.01 mmol) and 4'-[(2S)-2-amino-2-cyanoethyl]biphenyl-4-carbonitrile (Intermediate 1, 1200 mg, 0.81 mmol). TEA (640 μL, 4.54 mmol) was added and the reaction was stirred at room temperature for 18 hours. The reaction mixture was then concentrated under reduced pressure. The resulting oil was dissolved in EtOAc and washed successively with 2M aqueous hydrochloric acid, saturated aqueous sodium bicarbonate and sodium chloride solutions. The organic extract was dried (magnesium sulfate), filtered and concentrated under reduced pressure to give the subtitle compound as a yellow oil which was used in the next step without further purification.
[0271] ii) Diastereomeric mixture of (2S)-N-[(1S)-1-cyano-2-(4'-cyanobiphenyl-4-yl)ethyl]-1,4-oxazepane-2-carboxamide and (2R)-N-[(1S)-1-cyano-2-(4'-cyanobiphenyl-4-yl)ethyl]-1,4-oxazepane-2-carboxamide The preparation was carried out according to the procedure in step ii) of Method A using tert-butyl 2-{[(1S)-1-cyano-2-(4'-cyanobiphenyl-4-yl)ethyl]carbamoyl}-1,4-oxazepane-4-carboxylate to give the title compound as a white solid (150 mg, 50% over two steps). The isolated compound was a mixture of two diastereomers that were not separated. 1 H NMR (400 MHz, CDCl3): δ 7.75-7.64 (m, 4H), 7.59 (dd, 2H), 7.43 (dd, 2H), 7.30-7.22 (m, 1H), 5.25-5.11 (m, 1H), 4.12-4.06 (m, 1H), 4.05-3.95 (m, 1H), 3.81-3.70 (m, 1H), 3.33 (ddd, 1H), 3.25-3.09 (m, 2H), 3.08-3.00 (m, 1H), 2.98-2.81 (m, 2H), 1.92-1.75 (m, 2H) (one exchangeable proton not observed). LCMS (10cm_ESCI_Formic_MeCN) tR 2.58 (min) m / z 375 (MH + ).
[0272] Example 35 (2S)-N-{(1S)-1-cyano-2-[4-(4-methyl-3-oxo-1,2,3,4-tetrahydroquinoxalin-6-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide [ka] i) (2S)-2-({(2S)-1-amino-3-[4-(4-methyl-3-oxo-1,2,3,4-tetrahydroquinoxalin-6-yl)phenyl]-1-oxopropan-2-yl}carbamoyl)-1,4-oxazepane-4-carboxylate tert-butyl ester 7-(5,5-Dimethyl-1,3,2-dioxaborinane-2-yl)-1-methylquinoxalin-2(1H)-one (boronic ester 2, 100 mg, 0.37 mmol) and tert-butyl (2S)-2-{[(2S)-1-amino-3-(4-iodophenyl)-1-oxopropan-2-yl]carbamoyl}-1,4-oxazepane-4-carboxylate (Intermediate 4, 182 mg, 0.35 mmol) were dissolved in ACN (9 mL) and water (0.4 mL). The reaction mixture was degassed under nitrogen for 30 minutes, after which potassium carbonate (73 mg, 0.53 mmol) and Pd(dppf)Cl2·DCM (29 mg, 0.035 mmol) were added. The reaction mixture was heated at 80° C. for 1 h. The reaction was then concentrated under reduced pressure. Purification by silica gel column chromatography eluting with 8% methanol in EtOAc gave the sub-title compound as a brown oil (192 mg, 100%) which was used in the next step without further purification.
[0273] ii) (2S)-2-({(1S)-1-cyano-2-[4-(4-methyl-3-oxo-1,2,3,4-tetrahydroquinoxalin-6-yl)phenyl]ethyl}carbamoyl)-1,4-oxazepane-4-carboxylate tert-butyl To a solution of tert-butyl (2S)-2-({(2S)-1-amino-3-[4-(4-methyl-3-oxo-1,2,3,4-tetrahydroquinoxalin-6-yl)phenyl]-1-oxopropan-2-yl}carbamoyl)-1,4-oxazepane-4-carboxylate (192 mg, 0.35 mmol) in DCM (15 mL) was added Burgess reagent (167 mg, 0.70 mmol). The reaction mixture was stirred at room temperature for 24 h. After which time the reaction was transferred to a separatory funnel and washed with water. The organic extract was dried (phase separator cartridge) and concentrated under reduced pressure. The resulting solid was purified by silica gel column chromatography eluting with 65% EtOAc in isohexane to give a yellow oil. Trituration with diethyl ether gave the subtitle compound as an oil (101 mg, 54%). 1 H NMR (400 MHz, CDCl3): δ 8.32 (s, 1H), 7.95 (d, 1H), 7.67 (d, 2H), 7.58 (dd, 1H), 7.49 (d, 1H), 7.43 (d, 2H), 7.10-7.03 (m, 1H), 5.25-5.12 (m, 1H), 4.23-4.10 (m, 3H), 3.77 (s, 3H), 3.54-3.49 (m, 3H), 3.28-3.19 (m, 3H), 2.05-1.89 (m, 2H), 1.47 (s, 9H).
[0274] iii) (2S)-N-{(1S)-1-cyano-2-[4-(4-methyl-3-oxo-1,2,3,4-tetrahydroquinoxalin-6-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide tert-Butyl (2S)-2-({(1S)-1-cyano-2-[4-(4-methyl-3-oxo-1,2,3,4-tetrahydroquinoxalin-6-yl)phenyl]ethyl}carbamoyl)-1,4-oxazepane-4-carboxylate (101 mg, 0.19 mmol) was dissolved in formic acid (2 mL) and heated at 50° C. on a preheated hotplate stirrer for 10 minutes. The reaction was then concentrated under reduced pressure, dissolved in DCM and washed with saturated sodium bicarbonate solution. The organic extract was passed through a hydrophobic frit / phase separator and concentrated under reduced pressure. The solid was purified by silica gel column chromatography eluting with 0-2% methanolic ammonia (7N) in DCM to give the title compound as a yellow solid (65 mg, 80%). 1 H NMR (400 MHz, CDCl3): δ 8.32 (s, 1H), 7.95 (d, 1H), 7.65 (d, 2H), 7.57 (dd, 1H), 7.47 (m, 3H), 7.21 (d, 1H), 5.22 (dt, 1H), 4.11 (dd, 1H), 4.00 (dt, 1H), 3.75 (m, 5H), 3.32 (dd, 1H), 3.17 (m, 2H), 3.06 (dd, 1H), 2.99-2.87 (m, 2H), 1.89-1.81 (m, 2H) (two exchangeable protons not observed). LCMS (10cm_ESCI_Formic_MeCN) tR 2.38 (min) m / z 432 (MH + ).
[0275] Example 36 (2S)-2-[(3S,4E)-6-(2,3-dihydro-1H-indol-1-yl)-6-oxohex-4-en-3-yl]-1,4-oxazepane-2-carboxamide trifluoroacetic acid [ka] i) (2S)-2-{[(3S,4E)-6-(2,3-dihydro-1H-indol-1-yl)-6-oxohex-4-en-3-yl]carbamoyl}-1,4-oxazepane-4-carboxylate tert-butyl [ka] HATU (2.33 g, 6.12 mmol) was added to (2S)-4-(tert-butoxycarbonyl)-1,4-oxazepane-2-carboxylic acid (intermediate 3, 1.25 g, 5.10 mmol), [(1S,2E)-4-(2,3-dihydro-1H-indol-1-yl)-1-ethyl-4-oxo-buten-1-yl]amine trifluoroacetate (intermediate 6 of WO 2012 / 109415, 1.76 g, 5.10 mmol) and DiPEA (4.45 ml, 25.5 mmol) in DCM (25 ml) at room temperature. The resulting mixture was stirred at room temperature for 4 h. The reaction mixture was diluted with DCM (100 mL) and washed successively with 0.1 M aqueous HCl (100 mL), saturated aqueous NaHCO3 (100 mL) and saturated brine (100 mL). The organic layer was dried over Na2SO4, filtered and evaporated to give the subtitle product (1.50 g, 64%). LC-MS m / z 358 (M-Boc+H + ). A sample of the crude product (190 mg, 0.42 mmol) was purified by preparative chiral HPLC on a CHIRALPAK IC-3 column, eluted isocratically with 50% EtOH in hexanes as eluent. Fractions containing the desired compound were evaporated to dryness to give the subtitle product as a colourless oil (180 mg, 95%). LC-MS m / z 358 (M-Boc+H + ). To tert-butyl (2S)-2-{[(3S,4E)-6-(2,3-dihydro-1H-indol-1-yl)-6-oxohex-4-en-3-yl]carbamoyl}-1,4-oxazepane-4-carboxylate (180 mg, 0.39 mmol) in DCM (10 mL) at room temperature was added TFA (2 mL, 26.0 mmol). The resulting solution was stirred at room temperature for 4 h. The solvent was removed under reduced pressure. The crude product was purified by preparative flash (C18 column) using decreasingly polar mixtures of water (containing 0.1% TFA) and MeCN as eluents. Fractions containing the desired product were dried by lyophilization to give the title product as a white solid (100 mg, 54%). 1 H NMR (300 MHz, DMSO-d6): δ 8.80-9.10 (m, 2H), 8.30 (d,1H), 8.15 (d, 1H), 7.10-7.30 (m, 2H), 6.95-7.10 (m, 1H), 6.70-6.85 (m, 1H), 6.45 (d, 1H), 4.10-4.70 (m, 4H), 3.90-4.10 (m, 1H), 3.75-3.85 (m, 1H), 3.55-3.70 (m, 1H), 3.05-3.40 (m, 5H), 1.90-2.10 (m, 2H), 1.50-1.75 (m, 2H), 0.85 (t, 3H). LCMS m / z 358 (MH + ).
[0276] Example 37 (2S)-2-[(2E,4S)-1-(2,3-dihydro-1H-indol-1-yl)-6-methyl-1-oxohept-2-en-4-yl]-1,4-oxazepane-2-carboxamide trifluoroacetate [ka] i) (2S)-2-{[(2E,4S)-1-(2,3-dihydro-1H-indol-1-yl)-6-methyl-1-oxohept-2-en-4-yl]carbamoyl}-1,4-oxazepane-4-carboxylate tert-butyl ester [ka] HATU (465 mg, 1.22 mmol) was added to (2S)-4-(tert-butoxycarbonyl)-1,4-oxazepane-2-carboxylic acid (intermediate 3, 150 mg, 0.61 mmol), [(1S,2E)-4-(2,3-dihydro-1H-indol-1-yl)-1-(2-methylpropyl)-4-oxo-2-buten-1-yl]amine trifluoroacetate (intermediate 13 of WO 2012 / 109415, 174 mg, 0.47 mmol) and DiPEA (0.427 mL, 2.45 mmol) in DMF (5.0 mL) at 0 °C. The resulting solution was stirred at room temperature for 2.5 h. The reaction mixture was evaporated to dryness, redissolved in EtOAc (25 mL) and washed successively with saturated aqueous NH4Cl (20 mL x 4), saturated brine (20 mL x 3) and water (20 mL x 3). The organic layer was dried over Na2SO4, filtered and evaporated to give the crude subtitle product as a yellow oil (200 mg, 67%). LC-MS m / z 486 (MH + ). The crude product was used in the next step without further purification. To tert-butyl (2S)-2-{[(2E,4S)-1-(2,3-dihydro-1H-indol-1-yl)-6-methyl-1-oxohept-2-en-4-yl]carbamoyl}-1,4-oxazepane-4-carboxylate (200 mg, 0.41 mmol) in DCM (5.0 mL) at 0° C. was added TFA (0.635 mL, 8.24 mmol). The resulting solution was stirred at room temperature for 2 h. The solvent was removed under reduced pressure. The crude product was purified by preparative HPLC (Waters XBridge Prep C18 OBD column, 5μ silica, 19 mm diameter, 150 mm length) using decreasing polarity mixtures of water (containing 0.5% TFA) and MeCN as eluents. Fractions containing the desired product were evaporated to dryness to give the title product as a yellow gum (130 mg, 63%). LC-MS m / z 386 (MH + ). 1H-NMR (300 MHz, CD3OD): δ 8.15 (1H, d), 7.10-7.30 (2H, m), 7.05 (1H, t), 6.75-6.90 (1H, m), 6.50 (1H, d), 4.60-4.80 (1H, m), 4.40-4.55 (1H, m), 4.10-4.30 (3H, m), 3.70-3.95 (2H, m), 3.15-3.50 (5H, m), 2.05-2.25 (2H, m), 1.40-1.70 (3H, m), 0.95 (6H, t), 1.35 (1H, d) (two exchangeable protons not observed).
[0277] Pharmacological activity Test A1: Fluorescence assay of recombinant human (RH) DPP1 DPP1 activity was determined by measuring the enzymatic release of aminomethylcoumarin (AMC) from the peptide substrate (H-Gly-Arg-AMC), which results in an increase in fluorescence intensity at λex=350 nm and λem=450 nm. The assay was performed in black 384-well plates in a final volume of 50 μl at 22° C. Assay conditions included: 25 mM piperazine buffer pH 5.0; 50 mM NaCl, 5 mM DTT; 0.01% (v / v) Triton X-100; 100 μM H-Gly-Arg-AMC and rhDPP1 (approximately 50 pM). Potential inhibitors were prepared in DMSO and diluted in the assay so that the final concentration did not exceed 1% (v / v) DMSO. Serial 10-point half-log dilutions of inhibitors (typically a top concentration of 10 μM) were tested and pIC was determined using a four-parameter logistic equation with nonlinear curve fitting. 50was calculated. A standard DPP1 inhibitor, 4-amino-N-[(1S)-1-cyano-2-(4'-cyanobiphenyl-4-yl)ethyl]tetrahydro-2H-pyran-4-carboxamide (Example 3 of WO 2010 / 128324) was used as a positive control in the assay. Routinely, the inhibitor was pre-incubated with rhDPP1 for 30-60 min, after which the peptide substrate was added and the reaction was started for another 60 min at 22°C. The plate was then immediately read in a fluorescent plate reader using the emission and excitation wavelengths described above [Kam, CM, Gotz, MG, Koot, G, McGuire, MJ, Thiele, DL, Hudig, D & Powers, JC (2004). Arch Biochem Biophys, 427, 123-134 & McGuire, MJ, Lipsky, PE & Thiele, DL (1992). Arch Biochem Biophys, 295, 280-288]. The results are shown in Table 11 below (Examples 1-35).
[0278] Test A2: Fluorescence assay of recombinant human (RH) DPP1 DPP1 activity was determined by measuring the enzymatic release of aminomethylcoumarin (AMC) from a peptide substrate (H-Gly-Arg-AMC), which resulted in an increase in fluorescence intensity at λex=350 nm and λem=450 nm. The assay was performed in a black 384-well plate at room temperature in a final volume of 10 μl. Assay conditions included: 25 mM piperazine buffer pH 5.0; 50 mM NaCl, 5 mM DTT; 0.005% (v / v) Triton X-100; 50 μM H-Gly-Arg-AMC and 96.4 pM rhDPP1. Potential inhibitors were diluted in DMSO to obtain 100 times the final assay concentration. Compounds were tested at 10 concentrations using half-log dilution steps (typically the highest concentration of 1 μM) with a final DMSO concentration of 1% (v / v). Routinely, inhibitors were pre-incubated with rhDPP1 for 30 min, followed by addition of peptide substrate to initiate the reaction for an additional 30 min. After incubation, plates were read on a fluorescent plate reader using the emission and excitation wavelengths listed above. The pIC was calculated using a four-parameter logistic equation with nonlinear curve fitting. 50 was determined (Smartfit, Genedata Screener®). A standard DPP1 inhibitor, 4-amino-N-[(1S)-1-cyano-2-(4'-cyanobiphenyl-4-yl)ethyl]tetrahydro-2H-pyran-4-carboxamide (Example 3 of WO 2010 / 128324) was used as a positive control. [Modified from Kam, CM, Gotz, MG, Koot, G, McGuire, MJ, Thiele, DL, Hudig, D & Powers, JC (2004). Arch Biochem Biophys, 427, 123-134 & McGuire, MJ, Lipsky, PE & Thiele, DL (1992). Arch Biochem Biophys, 295, 280-288]. The results obtained are shown in Table 11 below (Examples 36-37).
[0279] [Table 13-1] [Table 13-2]
[0280] Aortic connection A number of compounds have been described in the literature to be selectively retained in the aorta in quantitative whole body autoradiography (QWBA) studies that cause concomitant ultrastructural changes when examined by electron microscopy (see, for example, muzolimine (Schmidt et al. 1984, Biochem. Pharmacol., 33, 1915-1921)). Also, the α-aminoamidonitrile 4-amino-N-[(1S)-1-cyano-2-(4'-cyanobiphenyl-4-yl)ethyl]tetrahydro-2H-pyran-4-carboxamide (Example 3 of WO 2010 / 128324), described as a DPP1 inhibitor, showed high levels of aorta retention in rat QWBA studies. To aid in the design of DPP1 inhibitors that reduce the risk of binding to elastin-rich tissues (e.g., aorta), the following in vitro competitive aorta binding assay (Test B) was developed to facilitate the selection process. Reference compounds and selected compounds described herein were tested by Method B and the results obtained are shown in Table 12.
[0281] Test B: In vitro competitive aortic binding assay Aortic homogenates were prepared from the thoracic aorta of Han Wistar rats. Freshly isolated thoracic aortas were frozen, later thawed, and stripped of inelastic material. The stripped aortas were then weighed, cut into small pieces, and homogenized first with a rotor-stator homogenizer; then with a Dounce homogenizer with a loose fit and then a tight fit in Puck's saline (137 mM NaCl, 5.37 mM KCl, 4.17 mM NaHCO3, and 5.55 mM D-glucose). The homogenate concentration was adjusted to 30 mg / mL in Puck's saline, and aliquots were stored at -80°C until use. Positive and negative control compounds, as well as test compounds, were prepared to 100 mM in DMSO and added to 1 mL aliquots of aortic homogenate in Puck's saline to a final concentration of 100 μM. Homogenate samples were preincubated with test compounds overnight at 37° C. with rotation. All samples were then 14C]4-amino-N-[(1S)-1-cyano-2-(4'-cyanobiphenyl-4-yl)ethyl]tetrahydro-2H-pyran-4-carboxamide was added to a final concentration of 100 μM and the samples were incubated at 37°C for an additional 2 hours with rotation. Protein was precipitated from each sample by adding 10 mL of acetone and pre-cooling to -20°C. The samples were left overnight at -20°C to complete the precipitation. The precipitate was pelleted by centrifugation at 4,500 x g for 20 minutes at 4°C, an aliquot of the supernatant was removed for analysis, and the remaining supernatant was discarded. The precipitate was washed by resuspending in 10 mL of 80% methanol in distilled water and repelleted by centrifugation at 4,500 x g for 20 minutes at 4°C. The wash was repeated four times with 80% methanol and two more times with 100% methanol, removing an aliquot of the supernatant for analysis each time. After the final wash, the pellet was air-dried and dissolved overnight in 1 mL of NCSII Tissue Solubiliser. A 1 mL aliquot of the supernatant was added to 5 mL of Ultima Gold scintillation fluid (Perkin Elmer, MA, USA) and 1 mL of the solubilized pellet was added to 5 mL of Hionic-Fluor scintillation fluid (Perkin Elmer, MA, USA). The radioactivity of the samples was measured in a Beckman LS6500 multipurpose scintillation counter (Beckman Coulter, IN, USA). In each experiment, 4-amino-N-[(1S)-1-cyano-2-(4'-cyanobiphenyl-4-yl)ethyl]tetrahydro-2H-pyran-4-carboxamide was used as a positive control, and N-(1-{(3R)-3-(3,5-difluorophenyl)-3-[1-(methylsulfonyl)piperidin-4-yl]propyl}piperidin-4-yl)-N-ethyl-2-[4-(methylsulfonyl)phenyl]acetamide (compound 1, WO 2006 / 001751) and DMSO vehicle were used as negative controls. Two samples were tested for each compound per experiment, and at least two experiments were performed for each test compound.The mean radioactivity of each sample preincubated with the DMSO vehicle control was taken as 100% bound, and the results of samples preincubated with the different compounds were expressed as % difference from the vehicle control. One-way ANOVA and Bonferroni multiple comparison test were performed to calculate the significance of the difference from the vehicle control.
[0282] The results obtained are shown below in Table 12. The results were quantified into four categories: strong binder, medium binder, binder, and no binder.
[0283] [Table 14-1] [Table 14-2]
[0284] [ 14 C]4-amino-N-[(1S)-1-cyano-2-(4'-cyanobiphenyl-4-yl)ethyl]tetrahydro-2H-pyran-4-carboxamide [ka] i) 4-Bromobenzo-[14C]-nitrile 1-Methylpyrrolidin-2-one (4 mL) was diluted with 1-bromo-4-iodobenzene (473 mg, 1.67 mmol) and [ 14 C]Copper(I) cyanide (1850MBq, 77mg, 0.84mmol) was dissolved and heated at 150°C for 3h with ultrasound. The reaction was diluted with EtOAc (150ml) and washed with 2% aqueous ferric chloride (100ml), 2% w / v aqueous sodium thiosulfate (100ml) and saturated brine (25mL x 3). The organic material was passed through a phase separator and the solvent was removed to give the crude product. The crude material was purified by silica gel column chromatography eluting with 2% EtOAc in isoheptane to give the title compound as a white solid (442MBq, 37mg, 24%).
[0285] ii) (S)-4-(1-amino-3-(4'-[14C]-cyanobiphenyl-4-yl)-1-oxopropan-2-ylcarbamoyl)tetrahydro-2H-pyran-4-ylcarbamate tert-butyl (S)-tert-butyl 4-(1-amino-1-oxo-3-(4-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)phenyl)propan-2-ylcarbamoyl)tetrahydro-2H-pyran-4-ylcarbamate (243 mg, 0.47 mmol), Pd-118 (30.6 mg, 0.05 mmol) and potassium carbonate (195 mg, 1.41 mmol) were added to a flask under a nitrogen atmosphere. The reaction flask was charged with 4-bromobenzo-[ 14 C]-nitrile (973MBq, 86mg, 0.47mmol) was added followed by water (3mL). The mixture was heated at 73°C under nitrogen for 4h and left at room temperature overnight. The reaction was diluted with water (50ml) and the product was extracted into DCM (25mL x 4). The combined organics were washed with saturated brine (50ml) and the organic portion was passed through a phase separator containing magnesium sulfate. The organics were concentrated in vacuo to give a dark brown oil. The crude material was purified by silica gel column chromatography eluting with 0-100% EtOAc in heptane to give a gum which was triturated with ether / heptane to give the title compound as an off-white solid (802MBq, 189mg, 82%). m / z (ES+) 395 [M+2H-BOC] + .
[0286] iii) (S)-4-(1-cyano-2-(4'-[14C]-cyanobiphenyl-4-yl)ethylcarbamoyl)tetrahydro-2H-pyran-4-ylcarbamate tert-butyl (S)-tert-Butyl 4-(1-amino-3-(4'-[14C]-cyanobiphenyl-4-yl)-1-oxopropan-2-ylcarbamoyl)tetrahydro-2H-pyran-4-ylcarbamate (802MBq, 189mg, 0.38mmol) was dissolved in DCM (4mL) and stirred at room temperature under nitrogen. Burgess reagent (137mg, 0.57mmol) was added and the reaction was stirred for 6.5h. The crude mixture was purified by silica gel column chromatography eluting with 25-100% EtOAc in heptane to give the title compound as a white solid (714MBq, 164mg, 90%). 1 H NMR (500 MHz, DMSO-d6): δ 1.38 (s, 9H), 1.55 - 1.77 (m, 2H), 1.84 - 2.02 (m, 1H), 3.07 - 3.25 (m, 3H), 3.43 - 3.53 (m, 1H), 3.54 - 3.62 (m, 1H), 5.04 - 5.13 (m, 1H), 7.04 (s, 1H), 7.43 (d, 2H), 7.71 (d, 2H), 7.87 (d, 2H), 7.93 (d, 2H), 8.46 (s, 1H). m / z (ES-) 475 [MH] - .
[0287] iv) (S)-4-amino-N-(1-cyano-2-(4'-[14C]-cyanobiphenyl-4-yl)ethyl)tetrahydro-2H-pyran-4-carboxamide To the pre-heated formic acid solution (500 μl, 13.04 mmol, 50° C.) was added tert-butyl (S)-4-(1-cyano-2-(4′-[14C]-cyanobiphenyl-4-yl)ethylcarbamoyl)tetrahydro-2H-pyran-4-ylcarbamate (133 MBq, 29 mg, 0.06 mmol) and the reaction was heated with stirring at 50° C. for 15 min. The reaction was quenched and added to a cooled mixture of saturated sodium bicarbonate (5 ml) and DCM (5 ml). The aqueous portion was further washed with two aliquots of DCM (5 ml) and the combined organics were washed with water (10 ml) and dried over sodium sulfate. The organics were stripped to give a colourless oil which was triturated with ether to give a white solid. The crude mixture was purified by silica gel column chromatography eluting with 0-2% methanol in DCM to give the title compound (93 MBq, 68%) which was stored as a solution in MeCN. 1 H NMR (500 MHz, DMSO-d6): δ 1.12 (d, 1H), 1.20 (d, 1H), 1.73 (ddd, 1H), 1.89 (ddd, 1H), 3.18 - 3.25 (m, 2H), 3.45 (dt, 1H), 3.53 - 3.66 (m, 3H), 5.02 (t, 1H), 7.43 (d, 2H), 7.71 (d, 2H), 7.89 (dd, 4H). m / z (ES+) 377 [M+H] + .
[0288] The present application also includes the following aspects. [Aspect 1] Formula (I): [ka] [In the formula, R 1 teeth, [ka] and; R 2 is hydrogen, F, Cl, Br, OSOC 1-3 Alkyl or C1-3 alkyl; R 3 are hydrogen, F, Cl, Br, CN, CF3, SO2C 1-3 Alkyl, CONH2 or SO2NR 4 R 5 (where R 4 and R 5 together with the nitrogen atom to which they are attached form an azetidine, pyrrolidine or piperidine ring; or R 1 teeth, [ka] Selected from; X is selected from O, S or CF2; Y is selected from O or S; Q is selected from CH or N; R 6 is C 1-3 alkyl, wherein the C 1-3 Alkyl may be substituted by 1, 2 or 3 F and may also be substituted by OH, OC 1-3 Alkyl, N(C 1-3 alkyl), optionally substituted with one substituent selected from 2, cyclopropyl or tetrahydropyran; R 7 is selected from hydrogen, F, Cl or CH3. or a pharma- ceutically acceptable salt thereof. [Aspect 2] R 1 but [ka] That is, 2. A compound according to embodiment 1, or a pharma- ceutically acceptable salt thereof. [Aspect 3] X is O; R 6 C 1-3 is alkyl; R7 is hydrogen, 3. A compound according to embodiment 1 or 2, or a pharma- ceutically acceptable salt thereof. [Aspect 4] (2S)-N-[(1S)-1-cyano-2-(4'-cyanobiphenyl-4-yl)ethyl]-1,4-oxazepane-2-carboxamide; (2S)-N-{(1S)-1-cyano-2-[4-(3-methyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide; (2S)-N-{(1S)-1-cyano-2-[4-(3,7-dimethyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide; 4'-[(2S)-2-cyano-2-{[(2S)-1,4-oxazepan-2-ylcarbonyl]amino}ethyl]biphenyl-3-yl methanesulfonate; (2S)-N-{(1S)-1-cyano-2-[4-(3-methyl-1,2-benzoxazol-5-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide; (2S)-N-{(1S)-1-cyano-2-[4'-(trifluoromethyl)biphenyl-4-yl]ethyl}-1,4-oxazepane-2-carboxamide; (2S)-N-[(1S)-1-cyano-2-(3',4'-difluorobiphenyl-4-yl)ethyl]-1,4-oxazepane-2-carboxamide; (2S)-N-{(1S)-1-cyano-2-[4-(6-cyanopyridin-3-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide; (2S)-N-{(1S)-1-cyano-2-[4-(4-methyl-3-oxo-3,4-dihydro-2H-1,4-benzothiazin-6-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide; (2S)-N-{(1S)-1-cyano-2-[4-(3-ethyl-7-methyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide; (2S)-N-[(1S)-1-cyano-2-{4-[3-(2-hydroxy-2-methylpropyl)-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl]phenyl}ethyl]-1,4-oxazepane-2-carboxamide; (2S)-N-[(1S)-1-cyano-2-{4-[3-(2,2-difluoroethyl)-7-fluoro-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl]phenyl}ethyl]-1,4-oxazepane-2-carboxamide; (2S)-N-[(1S)-1-cyano-2-(4-{3-[2-(dimethylamino)ethyl]-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl}phenyl)ethyl]-1,4-oxazepane-2-carboxamide; (2S)-N-{(1S)-1-cyano-2-[4-(3,3-difluoro-1-methyl-2-oxo-2,3-dihydro-1H-indol-6-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide; (2S)-N-{(1S)-1-cyano-2-[4-(7-fluoro-3-methyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide; (2S)-N-{(1S)-1-cyano-2-[4-(3-ethyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide; (2S)-N-[(1S)-1-cyano-2-{4-[3-(cyclopropylmethyl)-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl]phenyl}ethyl]-1,4-oxazepane-2-carboxamide; (2S)-N-[(1S)-1-cyano-2-{4-[3-(2-methoxyethyl)-2-oxo-2,3-dihydro-1,3-benzothiazol-5-yl]phenyl}ethyl]-1,4-oxazepane-2-carboxamide; (2S)-N-[(1S)-1-cyano-2-{4-[2-oxo-3-(propan-2-yl)-2,3-dihydro-1,3-benzoxazol-5-yl]phenyl}ethyl]-1,4-oxazepane-2-carboxamide; (2S)-N-{(1S)-1-cyano-2-[4-(4-methyl-3-oxo-3,4-dihydro-2H-1,4-benzoxazin-6-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide; (2S)-N-[(1S)-1-cyano-2-{4-[3-(2-methoxyethyl)-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl]phenyl}ethyl]-1,4-oxazepane-2-carboxamide; (2S)-N-{(1S)-1-cyano-2-[4-(5-cyanothiophen-2-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide; (2S)-N-[(1S)-2-(4'-carbamoyl-3'-fluorobiphenyl-4-yl)-1-cyanoethyl]-1,4-oxazepane-2-carboxamide; (2S)-N-{(1S)-1-cyano-2-[4-(1-methyl-2-oxo-1,2-dihydroquinolin-7-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide; (2S)-N-[(1S)-1-cyano-2-{4-[2-oxo-3-(tetrahydro-2H-pyran-4-ylmethyl)-2,3-dihydro-1,3-benzoxazol-5-yl]phenyl}ethyl]-1,4-oxazepane-2-carboxamide; (2S)-N-{(1S)-2-[4-(7-chloro-3-methyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]-1-cyanoethyl}-1,4-oxazepane-2-carboxamide; (2S)-N-[(1S)-1-cyano-2-{4-[3-(2,2-difluoroethyl)-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl]phenyl}ethyl]-1,4-oxazepane-2-carboxamide; (2S)-N-[(1S)-1-cyano-2-{4-[2-oxo-3-(2,2,2-trifluoroethyl)-2,3-dihydro-1,3-benzoxazol-5-yl]phenyl}ethyl]-1,4-oxazepane-2-carboxamide; (2S)-N-{(1S)-1-cyano-2-[4-(3-methyl-2-oxo-2,3-dihydro-1,3-benzothiazol-5-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide; (2S)-N-{(1S)-1-cyano-2-[4'-(methylsulfonyl)biphenyl-4-yl]ethyl}-1,4-oxazepane-2-carboxamide; (2S)-N-{(1S)-2-[4'-(azetidin-1-ylsulfonyl)biphenyl-4-yl]-1-cyanoethyl}-1,4-oxazepane-2-carboxamide; (2S)-N-[(1S)-1-cyano-2-(4'-fluorobiphenyl-4-yl)ethyl]-1,4-oxazepane-2-carboxamide; (2S)-N-{(1S)-2-[4-(1,3-benzothiazol-5-yl)phenyl]-1-cyanoethyl}-1,4-oxazepane-2-carboxamide; (2S)-N-[(1S)-1-cyano-2-(4'-cyanobiphenyl-4-yl)ethyl]-1,4-oxazepane-2-carboxamide; or (2S)-N-{(1S)-1-cyano-2-[4-(4-methyl-3-oxo-1,2,3,4-tetrahydroquinoxalin-6-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide 2. The compound of formula (I) according to embodiment 1, or a pharma- ceutically acceptable salt thereof, selected from: [Aspect 5] [ka] or a pharma- ceutically acceptable salt thereof. [Aspect 6] [ka] 2. The compound according to embodiment 1, which is (2S)-N-{(1S)-1-cyano-2-[4-(3-methyl-2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)phenyl]ethyl}-1,4-oxazepane-2-carboxamide, [Aspect 7] A pharmaceutical composition comprising a compound of formula (I) according to any one of aspects 1 to 6, and a pharma- ceutically acceptable adjuvant, diluent or carrier. [Aspect 8] A compound of formula (I) according to any one of aspects 1 to 6 for use in therapy. [Aspect 9] A compound of formula (I) according to any one of aspects 1 to 6 for use in the treatment of asthma or chronic obstructive pulmonary disease. [Aspect 10] Use of a compound of formula (I) according to any one of aspects 1 to 6 in the manufacture of a medicament for the treatment of asthma or chronic obstructive pulmonary disease. [Aspect 11] A method for treating asthma or chronic obstructive pulmonary disease in a patient suffering from said disease, comprising administering a therapeutically effective amount of a compound of formula (I) as defined in any one of aspects 1 to 6. [Aspect 12] A compound of formula (I) according to any one of aspects 1 to 6, · Nonsteroidal glucocorticoid receptor agonists; · Selective beta2 adrenoceptor agonists; Phosphodiesterase inhibitors; · Protease inhibitors; Glucocorticoids; Anticholinergics; Modulators of chemokine receptor function; and Inhibitors of kinase function A combination with one or more drugs independently selected from:
Claims
[Claim 1] The invention as described in the specification and drawings.
Citation Information
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