Anti-PD-L1 antibodies and their uses
Patent Information
- Application Number
- JP2023520184
- Authority / Receiving Office
- JP · JP
- Patent Type
- Patents
- Current Assignee / Owner
- Priority Date
- 2020-09-29
- Filing Date
- 2021-09-27
- Publication Date
- 2025-03-11
- Estimated Expiration
- 2041-09-27
AI Technical Summary
【0049】 本発明の範囲内で、本発明の上記の各技術的特徴と以下(例えば、実施例)に具体的に説明される各技術的特徴との間を、互いに組み合わせることにより、新しいまたは好ましい技術的解決策を構成することができることに理解されたい。スペースに限りがあるため、ここでは繰り返さない。
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Abstract
Description
[Technical field]
[0001] The present invention relates to the field of tumor immunology, and more specifically to antibodies that are anti-PD-L1 IgC-like regions and induce ADCC / CDC functional effects. [Background technology]
[0002] In the past decade, various tumor immune checkpoint antibody blockades, such as ipilimumab (CTLA4 blocking antibody), pembrolizumab / nivolumab (PD-1 blocking antibody) and atezolizumab (PD-L1 blocking antibody), have had groundbreaking breakthroughs in clinical application. Thus, the American scientist James Allison first proposed the generally accepted concept of immune checkpoint blockade. In different clinical indications, the therapeutic response rates of patients vary widely. In the group of patients with the most common solid tumors, such therapeutic response rates are limited, perhaps about 20%.
[0003] The PD1 / PD-L1 pathway is one of the important immune checkpoints. PD-L1 (programmed death ligand 1) is a membrane protein that is mainly expressed by dendritic cells and monocytes. Its receptor, PD-1 (programmed death protein receptor 1), is expressed by activated T cells, B cells, dendritic cells, and monocytes. When T cells identify and bind to tissue-associated antigens, the T cells are activated and express PD-1. PD-L1 bound to PD-1 inhibits T cell activation, leading to impaired immune function. Research has shown that various types of tumors also express PD-L1.
[0004] Research further indicates that the interaction between PD-1 and PD-L1 is achieved by binding to the IgV functional region (amino acids 19-127) of PD-L1. The heavy chain of atezolizumab binds to PD-L1 epitopes E58, Q66, V111, R113 and R125 through hydrogen bonds, and epitopes I54, Y56, N63, V111, M115, S117, A121 and Y123 bind to the heavy chain complementarity determining regions (HCDRs) in the CC'FG plasmid of PD-L1 through van der Waals forces. Different PD-L1 antibodies such as atezolizumab, durvalumab, BMS-963559 and Avelumab recognize different epitopes, but they all act on the IgV functional region of PD-L1. They compete with PD-1 for the same epitope, and their purpose is to block the interaction between PD-L1 and PD-1. Currently, the research and development of PD-L1 antibodies in China is also based on the concept of immune checkpoint blockade, but clinical application has not yet been approved.
[0005] The therapeutic response induced by immune checkpoint blockade depends in part on tumor characteristics such as the generation of tumor-specific immune responses, the formation of intratumoral immunoinhibitory microenvironment, and the susceptibility of tumors to immune responses. Studies have shown that soluble PD-L1 (sPD-L1) exists in the serum of tumor patients. High levels of sPD-L1 are present in advanced renal cell carcinoma, multiple myeloma, and diffuse large B-cell lymphoma and are associated with poor survival rates. Recent studies have found that there are four PD-L1 splice variants in cutaneous melanoma cells, which are responsible for secreting sPD-L1. The secretion of sPD-L1 is associated with splicing activity, cytokine stimulation, cellular stress response, and cell damage and cell death. The expression of membranous PD-L1 is directly proportional to the secretion of sPD-L1. In addition, various types of tumor cells generally have PD-L1 splicing activity and the function of secreting sPD-L1, where the most common or most highly expressed are PD-L1-3 / 12 and PD-L1-9. The full-length amino acids of PD-L1-3 / 12 and PD-L1-9 are amino acids 19-178 and 19-243, respectively. Apparently, secreted sPD-L1 contains IgV, which is the existing blocking PD-L1 antibody recognition region.
[0006] Currently, research further shows that sPD-L1 splice variants secreted by tumors can be used as "bait" to bind to PD-L1 antibodies and generate drug resistance. sPD-L1 secreted by only 1% of tumor cells can completely nullify the anti-tumor effect of PD-L1 antibodies. In PD-L1 antibody treatment, the secretion of sPD-L1 is associated with recurrence in tumor patients. This suggests that sPD-L1 secreted by tumors may inhibit the treatment of tumor disorders with PD-L1 blocking antibodies, or one of the important drug resistance mechanisms.
[0007] In summary, there is an urgent need in the art to develop more effective therapeutic agents against sPD-L1-secreted drug resistance, which are PD-L1-specific monoclonal antibodies that can maximally avoid sPD-L1, enhance Fc segment-induced ADCC / CDC activity, and have anti-tumor effects. Summary of the Invention [Problem to be solved by the invention]
[0008] The object of the present invention is to provide an anti-tumor and anti-sPD-L1-secreted drug-resistant PD-L1 antibody, which is an IgC-like region of anti-PD-L1 and can induce ADCC / CDC functional effects. [Means for solving the problem]
[0009] A first aspect of the present invention provides a PD-L1 antibody or active fragment thereof, which does not block the binding of PD-1 to PD-L1, and which specifically binds to the IgC-like domain of PD-L1, and has the activity of inducing ADCC / CDC functional effect.
[0010] In another preferred example, the antibody does not bind to the IgV functional region of PD-L1 (i.e., amino acids 19-127). In another preferred example, the antibody does not compete with PD-1 for binding to the IgV functional domain of PD-L1.
[0011] In another preferred example, the antibody does not compete with PD-1 for binding to the same epitope on the IgV functional region of PD-L1. In another preferred example, the antibody does not bind, or has reduced affinity to, soluble PD-L1 (sPD-L1) protein.
[0012] In another preferred example, the antibody does not bind to the soluble PD-L1 protein PD-L1-3. In another preferred example, the binding affinity P1 of the antibody to PD-L1-9 is much lower than the binding affinity P0 of antibody 130021 (reference antibody) to PD-L1-9, preferably P1 / P0≦1 / 5, more preferably ≦1 / 10, more preferably ≦1 / 100.
[0013] In another preferred example, the antibodies with reduced affinity for soluble PD-L1 protein include PD-L1-1 and PD-L1-9. In another preferred example, the antibody does not bind, or only partially binds, to soluble PD-L1 (sPD-L1) protein.
[0014] In another preferred example, the soluble PD-L1 protein that is not bound to an antibody comprises PD-L1-3. In another preferred example, the soluble PD-L1 proteins that the antibody moiety binds include PD-L1-1 and PD-L1-9.
[0015] the antibody is a non-blocking antibody, (i) E58, Q66, V111, R113, R125, and (ii) any amino acid site that does not bind to PD-L1, including I54, Y56, N63, V111, M115, S117, A121, and Y123.
[0016] In another preferred embodiment, the PD-L1 antibody or active fragment thereof is: (a) the amino acid sequence of LCDR1 as set forth in SEQ ID NO:16, LCDR2 as set forth in SEQ ID NO:17, and LCDR3 as set forth in SEQ ID NO:18; and (b) comprising the amino acid sequence of HCDR1 as set forth in SEQ ID NO:12, HCDR2 as set forth in SEQ ID NO:13, and HCDR3 as set forth in SEQ ID NO:14. wherein the antibody specifically binds to the IgC-like region of PD-L1.
[0017] In another preferred example, the IgC-like domain is the IgC domain of the PD-L1 protein and a segment domain connecting it to the cell membrane, wherein said domain consists of amino acid residues 132 to 238 of the PD-L1 protein.
[0018] In another preferred embodiment, the PD-L1 antibody or active fragment thereof induces ADCC / CDC functional effects to kill tumors. Here, any of the above amino acid sequences further include derivative sequences in which at least one amino acid is optionally added, deleted, modified and / or substituted, and which retain PD-L1 binding affinity.
[0019] In another preferred embodiment, the amino acid sequence of any of the above CDRs comprises a derived CDR sequence in which 1, 2 or 3 amino acids have been added, deleted, modified and / or substituted, and a derived antibody composed of a VH and a VL comprising the derived CDR sequence can retain binding affinity to PD-L1.
[0020] In another preferred example, the number of the added, deleted, modified and / or substituted amino acids is 1 to 5 (eg, 1 to 3, preferably 1 to 2, more preferably 1).
[0021] In another preferred embodiment, the derivative sequence in which at least one amino acid has been added, deleted, modified and / or substituted and which is capable of retaining PD-L1 binding affinity is an amino acid sequence that has at least 96% homology or sequence identity.
[0022] In another preferred example, the PD-L1 antibody or active fragment thereof comprises a heavy chain variable region or a light chain variable region, wherein the polypeptide sequence of the heavy chain variable region is at least 95% identical to SEQ ID NO:11, 20, 21, 22, 23, 24, or 25, and the polypeptide sequence of the light chain variable region is at least 95% identical to SEQ ID NO:15, 26, 27, 28, 29, or 30.
[0023] In another preferred example, the PD-L1 antibody or active fragment thereof comprises a heavy chain variable region having the polypeptide sequence set forth in SEQ ID NO:11, 20, 21, 22, 23, 24, or 25, and a light chain variable region having the polypeptide sequence set forth in SEQ ID NO:15, 26, 27, 28, 29, or 30.
[0024] In another preferred embodiment, the PD-L1 antibody or active fragment thereof is: (1) a heavy chain variable region as set forth in SEQ ID NO:25, and a light chain variable region as set forth in SEQ ID NO:27; (2) a heavy chain variable region as set forth in SEQ ID NO:25, and a light chain variable region as set forth in SEQ ID NO:30; (3) a heavy chain variable region as set forth in SEQ ID NO:23, and a light chain variable region as set forth in SEQ ID NO:29; (4) a heavy chain variable region as set forth in SEQ ID NO:24, and a light chain variable region as set forth in SEQ ID NO:29; (5) a heavy chain variable region as set forth in SEQ ID NO: 25, and a light chain variable region as set forth in SEQ ID NO: 29; (6) a heavy chain variable region as set forth in SEQ ID NO: 24, and a light chain variable region as set forth in SEQ ID NO: 30, and (7) The antibody comprises a heavy chain variable region and a light chain variable region selected from the group consisting of a heavy chain variable region as set forth in SEQ ID NO:23 and a light chain variable region as set forth in SEQ ID NO:30.
[0025] In another preferred embodiment, the amino acid sequence of the heavy chain variable region has at least 80%, 85%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% sequence homology or identity to the amino acid sequence set forth in SEQ ID NO:11, 20, 21, 22, 23, 24 or 25.
[0026] In another preferred embodiment, the amino acid sequence of the light chain variable region has at least 80%, 85%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% sequence homology or identity to the amino acid sequence shown in SEQ ID NO:15, 26, 27, 28, 29 or 30 in the sequence listing.
[0027] In another preferred embodiment, the PD-L1 antibody or active fragment thereof is chimeric. In another preferred embodiment, the PD-L1 antibody or active fragment thereof is humanized.
[0028] A second aspect of the present invention provides a recombinant protein, the recombinant protein comprising: (i) a PD-L1 antibody or an active fragment thereof according to the first aspect of the invention, and (ii) has an optional tag sequence to aid in expression and / or purification. In another preferred embodiment, the tag sequence comprises a 6His tag. In another preferred embodiment, the recombinant protein is a specific anti-PD-L1 protein.
[0029] A third aspect of the invention provides a polynucleotide encoding the PD-L1 antibody or active fragment thereof according to the first aspect of the invention, or a recombinant protein according to the second aspect of the invention.
[0030] A fourth aspect of the invention provides a vector, which comprises a polynucleotide according to the third aspect of the invention. In another preferred embodiment, the vector comprises a bacterial plasmid, a phage, a yeast plasmid, a plant cell virus, a mammalian cell virus such as an adenovirus, a retrovirus, or other vector.
[0031] A fifth aspect of the invention provides a genetically engineered host cell, which comprises a vector according to the fourth aspect of the invention or has integrated into its genome a polynucleotide according to the third aspect of the invention.
[0032] A sixth aspect of the present invention provides an immunoconjugate comprising: (a) a PD-L1 antibody or active fragment thereof according to the first aspect of the invention; and (b) comprises a coupling moiety selected from the group consisting of a detectable marker, a drug, a toxin, a cytokine, a radionuclide, or an enzyme.
[0033] A seventh aspect of the present invention provides a pharmaceutical composition, the pharmaceutical composition comprising: (a) a PD-L1 antibody or an active fragment thereof according to the first aspect of the invention, or a recombinant protein according to the second aspect of the invention, or an immunoconjugate according to the sixth aspect of the invention, and (b) comprises a pharma- ceutically acceptable carrier.
[0034] In another preferred embodiment, the pharmaceutical composition further comprises an additional active ingredient, preferably, the active ingredient comprises a small molecule compound, a cytokine, an antibody (e.g., an anti-PD-1 antibody, an anti-OX40 antibody, an anti-CD137 antibody, an anti-CD47 antibody, an ADC, a CAR-immune cell). In another preferred embodiment, the pharmaceutical composition is in the form of an injection.
[0035] In another preferred embodiment, the pharmaceutical composition is used for the preparation of a medicament for treating a tumor, the tumor being selected from the group consisting of bladder cancer, brain cancer such as gliomas, e.g., low-grade gliomas, glioblastomas, cervical cancer, breast cancer, colon cancer, rectal cancer, endometrial cancer, kidney cancer, renal cell carcinoma, renal pelvis cancer, leukemia, lung cancer, non-small cell lung cancer, melanoma, non-Hodgkin's lymphoma, pancreatic cancer, prostate cancer, ovarian cancer, fibrosarcoma, acute lymphoblastic leukemia (ALL), acute myeloid leukemia (AML), chronic lymphocytic leukemia (CLL), chronic myeloid leukemia (CML), multiple myeloma, bone marrow derived tumors, and thyroid cancer.
[0036] In another preferred embodiment, the pharmaceutical composition is used for the preparation of a medicament for treating an infectious disease, the infectious disease comprising an infectious viral disease, an infectious bacterial disease or an infectious fungal disease. In another preferred embodiment, in said infectious disease, the infectious lesion or infected host cells express PD-L1 (HIV, Hepatitis virus, Mycobacterium tuberculosis).
[0037] In another preferred embodiment, the infectious viral disease is caused by a pathogen selected from HIV, hepatitis virus (A, B, C), herpes virus, adenovirus, influenza virus, arbovirus, echovirus, rhinovirus, coxsackievirus, coronavirus, respiratory syncytial virus, mumps adenovirus, rotavirus, measles virus, rubella virus, parvovirus, vaccinia virus, HTLV virus, dengue virus, papilloma virus, molluscum virus, poliovirus, rabies virus, JC virus, arbovirus, and encephalitis virus.
[0038] In another preferred embodiment, the infectious bacterial disease is caused by a pathogen selected from Mycobacterium tuberculosis, Chlamydia, Rickettsia, Staphylococcus, Streptococcus, Pneumococcus, Meningococcus, Neisseria gonorrhoeae, Klebsiella, Proteus, Reiterella, Pseudomonas, Legionella, Diphtheria, Salmonella, Bacillus, Cholera, Tetanus, Clostridium botulinum, Bacillus anthracis, Yersinia pestis, Leptospira, and Lyme disease bacteria.
[0039] In another preferred embodiment, the infectious fungal disease is caused by a pathogen selected from Candida, Cryptococcus neoformans, Aspergillus, Mucor, Sporothrix schenckii, Blastomyces dermatitidis, Paracoccidioides braziliensis, Coccidioides immitis, and Histoplasma capsularis. In another preferred embodiment, the infectious disease is caused by a pathogen selected from HIV, hepatitis virus, influenza virus, herpes virus, Giardia, Plasmodium, Leishmania, Staphylococcus aureus, and Pseudomonas aeruginosa.
[0040] In another preferred embodiment, the infectious disease is caused by a pathogen selected from HIV, Hepatitis virus (A, B, C) and Mycobacterium tuberculosis.
[0041] In another preferred example, the composition can be used in combination with another tumor immunotherapy, including but not limited to chemotherapy, anti-CD20 mAb, anti-TIM-3 mAb, anti-LAG-3 mAb, anti-CD73 mAb, anti-CD47 mAb, anti-DLL3 mAb, anti-FRmAb mAb, anti-CTLA-4 antibody, anti-OX40 antibody, anti-CD137 antibody, anti-PD-1 antibody, PD-1 / PD-L1 therapy, other immuno-oncology drugs, anti-angiogenesis drugs, radiation therapy, antibody-drug conjugates (ADC), targeted therapy or other anti-cancer drugs.
[0042] In another preferred example, the pharmaceutical composition, method of targeting surface PD-L1 or enhancing ADCC / CDC effect of cancer cells in a subject in need thereof comprises the step of administering to said subject a pharmaceutical composition according to the seventh aspect of the invention.
[0043] An eighth aspect of the invention provides a method for detecting PD-L1 protein in a sample, the method comprising: (1) obtaining a sample from a subject; (2) contacting the sample with a PD-L1 antibody or active fragment thereof according to the first aspect of the invention; (3) determining the subject's PD-L1 level. In another preferred embodiment, the method is non-therapeutic and non-diagnostic. In another preferred embodiment, the method is in vitro detection.
[0044] A ninth aspect of the invention provides a kit for detecting PD-L1, the kit comprising one or more species selected from the group consisting of a PD-L1 antibody or an active fragment thereof according to the first aspect of the invention, or an immunoconjugate according to the sixth aspect of the invention, a pharmaceutical composition according to the seventh aspect of the invention, and instructions.
[0045] In another preferred example, the instructions state that the kit is used for detecting PD-L1 expression in a subject. In another preferred embodiment, the kit is used to detect tumors that express the PD-L1 protein (i.e., PD-L1 positive).
[0046] A tenth aspect of the present invention provides an immune cell, which expresses or exposes on the outside of its cell membrane the antibody according to the first aspect of the present invention. In another preferred embodiment, the immune cells include NK cells and T cells. In another preferred embodiment, the immune cells are derived from a human or non-human mammal (eg, a mouse).
[0047] An eleventh aspect of the invention provides a method for treating a disease associated with abnormal PD-L1 expression or function, said method comprising administering to a subject in need thereof a pharma- ceutical effective amount of a PD-L1 antibody according to the first aspect of the invention, an immunoconjugate according to the sixth aspect of the invention, or a pharmaceutical composition according to the seventh aspect of the invention, an immune cell according to the tenth aspect of the invention, or a combination thereof.
[0048] In another preferred embodiment, the disease associated with abnormal PD-L1 expression or function is a tumor or an infectious disease. In another preferred embodiment, the PD-L1 antibody may be administered alone or in combination with other therapeutic agents. In another preferred embodiment, the other therapeutic agent comprises an immune checkpoint blockade agent, an adjuvant or a vaccine. Effect of the Invention
[0049] It should be understood that within the scope of the present invention, the above technical features of the present invention and the technical features specifically described below (e.g., in the Examples) can be combined with each other to form new or preferred technical solutions, which will not be repeated here due to space limitations. [Brief description of the drawings]
[0050] [Figure 1]Figure A shows the amino acid regions of full-length PD-L1 and its splice variants sPD-L1-3 or 12, sPD-L1-9, the distinguishing regions of known PD-L1 antibodies, and the epitopes of PD-L1 mouse monoclonal antibody mAb#19 and its humanized antibodies. Figure B shows the amino acid sequence of human PD-L1 IgC and its connecting segment with the cell membrane, where the underlined dot represents the signal peptide segment, the underlined double line represents IgV (amino acids 19-127), the underlined single line represents IgC and its connecting segment with the cell membrane (amino acids 132-238), the underlined dash + underlined short line represents the transmembrane domain (amino acids 239-259), and the underlined wavy line represents the intracellular domain (amino acids 260-290).
[0051] [Diagram 2] Schematic diagram of human PD-L1 splice variants, where Figure A shows that the full length of PD-L1 contains six exons, PD-L1-1, PD-L1-3, PD-L1-9 and PD-L1-12 are splice variants, the transmembrane region is located in the fourth exon and is labeled in pink, the truncated segments are labeled in brackets, and Stop represents the stop codon. Figure B shows the nucleic acid and amino acid sequences of full length transmembrane PD-L1, splice variants PD-L1-1, PD-L1-3, PD-L1-9 and PD-L1-12, where the transmembrane region is located in the exon 4 segment and is labeled in pink, the truncated segments are labeled in red brackets, the amino acid sequence of each splice variant is labeled in blue, and the underlined lines represent additional different amino acids.
[0052] [Diagram 3]Figure 2 shows the binding ability of PD-L1 mouse monoclonal antibodies to human PD-L1 and IgC-like. Figure A shows the binding ability of PD-L1 mouse monoclonal antibodies 130021 (R&D systems, USA) and 29E.2A3 (Biolegend, USA) to human PD-L1 and IgC-like detected by flow cytometry. Wherein antibody 130021 binds to PD-L1 and IgC-like, antibody 29E.2A3 binds only to PD-L1 and does not recognize the IgC-like segment, indicating that the recognition region is only in IgV, clone 24F.10C12 (Biolegend) is a human PD-L2 mouse monoclonal antibody, Figure B shows the cell flow cytometry screening of PD-L1 mouse monoclonal antibodies, where the five screened PD-L1 mouse monoclonal antibodies mAb#4, mAb#11, mAb#15, mAb#19 and mAb#23 can bind to PD-L1 and also recognize IgC-like, where PD-L1 PE stands for PE fluorescently labeled PD-L1 antibody.
[0053] [Figure 4] Figure 2 shows the affinity of PD-L1 mouse monoclonal antibodies to recombinant protein rPD-L1, where Figure A shows the affinity of five PD-L1 mouse monoclonal antibodies mAb#4, mAb#11, mAb#15, mAb#19 and mAb#23 to recombinant protein PD-L1 as detected by ELISA, Figure B shows the blocking effect of recombinant proteins rPD-L1-3-HIS and rPD-L1-9-HIS on five PD-L1 mouse monoclonal antibodies mAb#4, mAb#11, mAb#15, mAb#19 and mAb#23 as detected by flow cytometry, and Figure C shows the effect of different concentrations of recombinant protein rPD-L1-9-HIS on mouse monoclonal antibody #19 binding PD-L1 as detected by flow cytometry.
[0054] [Diagram 5]Figure 2 shows the affinity of PD-L1 mouse monoclonal antibody #19 to the native form of sPD-L1 detected by ELISA, where Panel A shows the affinity of mouse monoclonal antibody mAb #19 to sPD-L1-3 and sPD-L1-9 in cell culture supernatant, Panel B shows the affinity of mouse monoclonal antibody mAb #19 to sPD-L1-3 in cell culture supernatant, and Panel C shows the affinity of mouse monoclonal antibody mAb #19 to sPD-L1-9 in cell culture supernatant, where Blank represents the negative control of medium.
[0055] [Figure 6] Figure 2 shows the anti-tumor effect of PD-L1 mouse monoclonal antibody #19 in an MC38 mouse tumor model expressing human PD-L1 and sPD-L1-9, where Panel A shows the tumor size of the mice on different days, expressed as mean tumor volume ± SEM, and Panel B shows the survival rate of the mice on different days.
[0056] [Figure 7] Figure 1 shows humanization of mouse monoclonal antibody #19. The amino acid sequences of the different heavy (A) and light (B) chain Fabs are as indicated in the figure. mVH and mVL: mouse monoclonal antibody heavy and light chain variable regions. VH and VL: humanized antibody heavy and light chain variable regions. The CDR regions of the heavy and light chains are shown in bold red and underlined. [Figure 8] Figure 1 shows the affinity of humanized mouse monoclonal antibody #19 and different heavy chain (H) and light chain (L) combinations for membrane and secreted PD-L1 and IgC-like.
[0057] [Figure 9]Figure 1 shows the affinity of mouse monoclonal antibody #19 humanized, different heavy chain (H) and light chain (L) combinations to membrane-type PD-L2 (human). Figure 2 shows the affinity of clone #19 humanized antibody to membrane-type PD-L2 (A is shown by MFI, B is shown by dots) detected by flow cytometry. C: CHO-K1 parental cells as negative control. Clone 24F.10C12: human PD-L2 mouse monoclonal antibody. Secondary antibody: PE-labeled goat anti-mouse antibody (BD biosciences, USA).
[0058] [Figure 10] Figure 1 shows the affinity of mouse monoclonal antibody #19 humanized, different heavy chain (H) and light chain (L) combinations to membrane CD80 (human). Figure 2 shows the affinity of clone #19 humanized antibody to membrane CD80 (A is shown by MFI, B is shown by dots) detected by flow cytometry. C: CHO-K1 parental cells as negative control. Clone 2D10: human CD80 mouse monoclonal antibody clone (Elabscience, Wuhan). Secondary antibody: PE-labeled goat anti-mouse antibody (BD biosciences).
[0059] [Figure 11] Figure 1 shows the affinity of humanized antibody H6L2 to membrane-type PD-L1 in the absence or presence of rPD-L1-9-HIS. The effect of humanized antibody H6L2 on membrane-type PD-L1 affinity (A) and the effect of various concentrations of rPD-L1-9-HIS on H6L2 affinity (B, shown as MFI; C, shown as dots) were detected by flow cytometry and compared with Avelumab and Atezolizumab.
[0060] [Figure 12]Figure 1 shows the affinity of humanized antibody H6L2 to membrane-type PD-L1 in the absence or presence of rPD-L1-3-HIS. The effect of different concentrations of rPD-L1-3-HIS on H6L2 affinity (A shown as MFI and B shown as dots) was detected by flow cytometry, and is compared with Avelumab and Atezolizumab.
[0061] [Figure 13] 1 shows the blocking effect of humanized antibody H6L2 on the binding of PD-1 to PD-L1. [Figure 14] Figure 1 shows the ADCC activity of humanized antibody H6L2 and the influence of secreted sPD-L1 on its ADCC effect. In the Jurkat-CD16-NFAT-Luciferase platform, the ability of #19 humanized antibody to induce Luciferase activity in the presence (A) or absence (B) of secreted sPD-L1 (recombinant protein rPDL1-3-HIS or rPDL1-9-HIS) is detected, and at the same time, it is compared with avelumab.
[0062] [Figure 15] Figure 1 shows the antitumor effect of humanized antibody H6L2. A. Tumor size represented as the mean tumor volume ± standard error in each group. B. Survival rate. PBS and avelumab are the negative and positive control groups, respectively. [Figure 16] Figure 2 shows the binding ability of the anti-human PD-L1 antibody atezolizumab to the native form of sPD-L1. The binding ability of the anti-human PD-L1 antibody atezolizumab to the native form of sPD-L1 is detected by ELISA, where BL indicates no sPD-L1 supernatant as background control, ate treated represents treated with atezolizumab, hIgG1 treated represents treated with human hIgG1, and sPD-L1-3 or sPD-L1-9 represent supernatants containing sPD-L1-3 or sPD-L1-9, respectively.
[0063] [Figure 17] Figure 1 shows the blocking effect of human PD-L1 antibodies avelumab and atezolizumab on the binding of PD-1 to PD-L1, and the effect of secreted sPD-L1 on that blocking effect. A and B. The effect of avelumab and atezolizumab on the interaction of intracellular PD-1 with PD-L1, C and D. The effect of sPD-L1 on the blocking of avelumab and atezolizumab. The antibody dose was 100 ng / data point, and the dose of rPD-L1-9-HIS was as indicated in the figure. DETAILED DESCRIPTION OF THE PREFERRED EMBODIMENTS
[0064] After extensive and thorough research, the present inventors have discovered a non-blocking PD-L1 antibody for the first time, which does not block the binding of PD-1 to PD-L1, but this non-blocking PD-L1 antibody actually has excellent anti-tumor activity. Research shows that the non-blocking PD-L1 antibody of the present invention can specifically target the IgC-like region of PD-L1, maximally avoid sPD-L1, and simultaneously induce ADCC / CDC activity. Based on this, a counterinvention has been completed.
[0065] Specifically, the inventors have constructed five specific anti-human PD-L1 mouse monoclonal antibodies, none of which binds to sPD-L1-3, and one of the monoclonal antibodies can partially avoid the extracellular full-length sPD-L1-9 of PD-L1, and this humanized antibody is significantly superior to the control anti-human PD-L1 atezolizumab and avelumab in this aspect.
[0066] term In order that this disclosure may be more readily understood, certain terms are first defined. As used in this application, unless otherwise stated herein, each of the following terms shall have the meaning indicated below. Additional definitions are set forth throughout the application.
[0067] In the present invention, the terms "non-blocking PD-L1 antibody of the invention", "PD-L1 antibody of the invention", "specific antibody of the invention", "antibody of the invention", "protein of the invention" or "polypeptide of the invention" are used interchangeably and refer to an antibody that specifically binds to PD-L1 protein. The non-blocking PD-L1 antibody of the present invention does not block the binding of PD-1 to PD-L1, can specifically target the IgC-like region of PD-L1, and has the activity of inducing ADCC / CDC functional effects. For example, a protein or polypeptide having a heavy chain (e.g., the amino acid sequences shown in SEQ ID NOs:11, 20, 21, 22, 23, 24 and 25) and / or a light chain (e.g., the amino acid sequences shown in SEQ ID NOs:15, 26, 27, 28, 29 and 30). They may or may not contain the starting methionine.
[0068] IgC-like domain As used herein, the connecting segment between the IgC region and the cell membrane is designated the "IgC-like region", and is the amino acid 132-238 segment in PD-L1 protein SEQ ID No:19 (A and B in Figure 1).
[0069] PD-L1 antibody The present invention provides PD-L1 antibodies with high affinity to human PD-L1 protein. The subject antibodies show effective binding and tumor killing activity and are used for therapeutic and diagnostic applications. PD-L1 protein is a 40 kDa type I transmembrane protein. Its extracellular portion contains an N-terminal immunoglobulin V (IgV) domain (amino acids 19-127) and a C-terminal immunoglobulin C (IgC) domain (amino acids 132-225). Similar to the interaction between the IgV domain of an antibody and a T-cell receptor, PD-1 and PD-L1 interact through the conserved front and side of their IgV domains. Current anti-PD-L1 antibodies all block the binding between PD-1 and PD-L1 by binding to the IgV domain (Figures 1A and B). Thus, the present invention discloses a discovery. That is, the non-blocking PD-L1 antibody of the present invention can effectively target PD-L1 after binding to the IgC-like domain of PD-L1 protein, and can further improve the therapeutic effect. Accordingly, one embodiment disclosed by the present invention provides an anti-PD-L1 antibody or active fragment thereof, which can specifically bind to the immunoglobulin C (IgC)-like domain of human programmed death-ligand 1 (PD-L1) protein. The antibody of the present invention has one or more desired functional properties, including, but not limited to, high affinity binding to PD-L1, high specificity for PD-L1, the ability to stimulate complement-dependent cytotoxicity (CDC), antibody-dependent phagocytosis (ADPC) and / or antibody-dependent cell-mediated cytotoxicity (ADCC) against PD-L1-expressing cells, and the ability to inhibit tumor growth when used alone or in combination with other anti-cancer therapies in subjects and animal models.
[0070] In some embodiments, the IgC-like domain consists of amino acid residues 132 to 238. In some embodiments, the antibody or active fragment thereof is capable of binding to amino acid residues of the PD-L1 protein.
[0071] In a preferred embodiment of the invention, the amino acid sequence of PD-L1 is [ka] It is.
[0072] Here, positions 132 to 238 in SEQ ID No:19 are an IgC-like region. [ka]
[0073] The amino acid segments and positions of PD-L1 are as shown in the following table: [Table 1]
[0074] Secreted sPD-L1 splice variant The present inventors have first discovered secreted PD-L1 splice variants and their relationship with sPD-L1 secretion. The secretion of sPD-L1 is directly proportional to the expression of membrane PD-L1, and is also related to its splicing activity, cytokine stimulation, cell stress response, and cell damage and cell death. Human PD-L1 splice variants PD-L1-1, PD-L1-3, PD-L1-9 and PD-L1-12 and their sequences are shown in Figure 2 (Note: PD-L1-12 is the same as the PD-L1-3 amino acid sequence). Herein, "secreted PD-L1", "soluble PD-L1", "secreted sPD-L1" and "sPD-L1" are used interchangeably and all refer to secreted PD-L1 splice variants.
[0075] In a specific example, the native form of secreted sPD-L1 is expressed and secreted by MC38 cells, and rPD-L1-HIS is secreted sPD-L1 with a His tag recombinantly expressed by HEK293 cells, including rPD-L1-3-HIS, rPD-L1-9-HIS.
[0076] In another preferred example, five specific anti-human PD-L1 mouse monoclonal antibodies have been successfully selected, which can distinguish PD-L1 and IgC expressed on cells. None of the five monoclonal antibodies bind to sPD-L1-3, and one of them can partially avoid sPD-L1-9, which is the extracellular full-length of the entire PD-L1, including IgV and IgC functional segments. In vivo experiments in mouse tumor models secreting sPD-L1-9 show that it has anti-drug resistance and anti-tumor effects.
[0077] In another preferred example, PD-L1 mouse monoclonal antibody #19 is selected. Antibody 130021 (reference antibody), mouse monoclonal antibody 130021 (R&D systems), binds to the IgC-like region of PD-L1 and binds to sPD-L1-9, but not sPD-L1-3, in soluble PD-L1 protein.
[0078] As used herein, the term "antibody" or "immunoglobulin" refers to a heterotetrameric glycoprotein of about 150,000 daltons, composed of two identical light chains (L) and two identical heavy chains (H) with the same structural characteristics. Each light chain is linked to a heavy chain by one covalent disulfide bond, and the number of disulfide bonds between the heavy chains of different immunoglobulin isotypes varies. Each heavy and light chain also has regularly spaced intrachain disulfide bonds. Each heavy chain has a variable region (VH) at one end followed by multiple constant regions. Each light chain has a variable region (VL) at one end and a constant region at the other end, where the constant region of the light chain faces the first constant region of the heavy chain, and the variable region of the light chain faces the variable region of the heavy chain. Certain amino acid residues form an interface between the variable regions of the light and heavy chains.
[0079] As used herein, the term "variable" refers to the difference in sequence of certain parts of the variable region in an antibody, which forms the binding and specificity of various specific antibodies to a particular antigen. However, the variability is not evenly distributed throughout the antibody variable region. It is concentrated in three segments called the complementarity determining regions (CDRs) or hypervariable regions of the light and heavy chain variable regions. The more conserved parts of the variable regions are called framework regions (FRs). Natural heavy and light chain variable regions each contain four FR regions, which are mostly in a β-folded configuration connected by the three CDRs that form a connecting ring, and can sometimes form a partial β-folded structure. The CDRs of each chain are closely juxtaposed by the FR regions and, together with the CDRs of the other chain, form the antigen-binding site of the antibody (see Kabat et al., NIH Publ. No. 91-3242, Vol. I, pp. 647-669 (1991)). The constant regions are involved directly in binding the antibody to an antigen, but they also exhibit various effector functions, such as those involved in antibody-dependent cellular toxicity of the antibody.
[0080] The "light chains" of vertebrate antibodies (immunoglobulins) can be assigned to one of two different classes (called kappa and lambda) according to the amino acid sequence of their constant region. According to the amino acid sequence of the constant region of their heavy chains, immunoglobulins can be assigned to different classes. There are five main classes of immunoglobulins: IgA, IgD, IgE, IgG, and IgM, some of which can be further divided into subclasses (isotypes), such as IgG1, IgG2, IgG3, IgG4, IgA, and IgA2. The heavy chain constant regions that correspond to the different classes of immunoglobulins are called alpha, delta, epsilon, gamma, and mu, respectively. The subunit structures and three-dimensional configurations of the different classes of immunoglobulins are well known to those skilled in the art.
[0081] As used herein, the term "monoclonal antibody (mAb)" refers to an antibody obtained from a substantially homogeneous population, i.e., the individual antibodies within the population are identical except for some possible naturally occurring mutations. Monoclonal antibodies are highly specific for a single antigenic site. Also, unlike traditional polyclonal antibody preparations (which usually have different antibodies against different determinants), each monoclonal antibody is directed against a single determinant on the antigen. In addition to their specificity, an advantage of monoclonal antibodies is that they are synthesized by a hybridoma culture and are not contaminated by other immunoglobulins. The modifier "monoclonal" refers to the character of the antibody being obtained from a substantially homogeneous population of antibodies, and should not be construed as requiring a particular method of antibody purification.
[0082] The present invention further includes monoclonal antibodies having the corresponding amino acid sequences of said anti-PD-L1 protein monoclonal antibodies, monoclonal antibodies having the variable region chains of said anti-PD-L1 protein monoclonal antibodies, as well as other proteins or protein conjugates and fusion expression products having these chains. Specifically, the present invention includes any proteins or protein conjugates and fusion expression products (i.e., immunoconjugates and fusion expression products) having light and heavy chains that contain hypervariable regions (complementarity determining regions, CDRs), so long as the hypervariable regions are identical or at least 90% homologous, preferably at least 95% homologous, to the hypervariable regions of the light and heavy chains of the present invention.
[0083] As known to those skilled in the art, immunoconjugates and fusion expression products include conjugates formed by attaching drugs, toxins, cytokines, radionuclides, enzymes, as well as other diagnostic or therapeutic molecules to the anti-PD-L1 protein monoclonal antibodies, or fragments thereof.The present invention further includes a cell surface marker or antigen that binds to the anti-PD-L1 protein monoclonal antibodies, or fragments thereof.
[0084] The present invention includes not only complete monoclonal antibodies, but also immunologically active antibody fragments such as Fab or (Fab')2 fragments, antibody heavy chains, and antibody light chains. As used herein, the terms "heavy chain variable region" and "VH" are used interchangeably. As used herein, the terms "variable region" and "complementarity determining region (CDR)" are used interchangeably.
[0085] In another preferred embodiment, the heavy chain variable region of the antibody comprises three complementarity determining regions, CDR1, CDR2, and CDR3. In another preferred example, the heavy chain of the antibody comprises the above-mentioned heavy chain variable region and heavy chain constant region, and the heavy chain constant region may be derived from a mouse or a human.
[0086] In another preferred embodiment, the antibody is an anti-PD-L1 protein mouse or human-mouse chimeric monoclonal antibody, and its heavy and / or light chain constant region may be a humanized heavy or light chain constant region. More preferably, the humanized heavy or light chain constant region is a human IgG1, IgG2, etc. heavy or light chain constant region.
[0087] The invention further provides other proteins or fusion expression products comprising the antibodies of the invention. In particular, the invention includes any protein or protein conjugates and fusion expression products (i.e., immunoconjugates and fusion expression products) of the heavy and light chains that comprise the variable regions, so long as the variable regions are identical or at least 90% homologous, preferably at least 95% homologous, to the variable regions of the heavy and light chains of the antibodies of the invention.
[0088] In general, the antigen-binding properties of an antibody can be explained by three specific regions located in the variable regions of the heavy and light chains, called the variable regions (CDRs), which are divided into four framework regions (FRs), and the amino acid sequences of the four FRs are relatively conserved and are not directly involved in the binding reaction. These CDRs form a cyclic structure, and the β-fold formed by the FRs between them is spatially close, and the CDRs of the heavy chain and the CDRs of the corresponding light chain constitute the antigen-binding site of the antibody. The amino acids that constitute the FR or CDR region can be determined by comparing the amino acid sequences of the same kind of antibody.
[0089] The heavy and / or light chain variable regions of the antibodies of the invention are of particular interest since at least some of them are involved in binding to the antigen. Thus, the invention includes molecules comprising the light and / or heavy chain variable regions of these monoclonal antibodies having CDRs, so long as the CDRs have 90% or more (preferably 95% or more, most preferably 98% or more) homology with the CDRs identified herein.
[0090] The present invention includes not only complete monoclonal antibodies, but also immunologically active fragments of the antibodies or fusion proteins formed between the antibodies and other sequences. Thus, the present invention further includes fragments, derivatives and analogs of said antibodies.
[0091] As used herein, the terms "fragment," "derivative," and "analog" refer to a polypeptide that retains essentially the same biological function or activity as the antibody of the present invention. A polypeptide fragment, derivative, or analog of the present invention may be (i) a polypeptide in which one or more conservative or non-conserved amino acid residues (preferably conservative amino acid residues) have been substituted (such substituted amino acid residues may or may not be encoded by the genetic code), or (ii) a polypeptide having a substitution at one or more amino acid residues, or (iii) a polypeptide formed by fusing the mature polypeptide with another compound (e.g., a compound that extends the half-life of the polypeptide, such as polyethylene glycol), or (iv) a polypeptide formed by fusing an additional amino acid sequence to the polypeptide sequence (e.g., a fusion protein formed with a leader sequence or a secretory sequence or a sequence for purifying the polypeptide or a protein sequence or a 6His tag). As used herein, these fragments, derivatives, and analogs are within the knowledge of those skilled in the art.
[0092] The antibody of the present invention refers to a polypeptide comprising the above CDR region, which has PD-L1 protein-binding activity. The term further includes mutant forms of the polypeptide comprising the above CDR region, which have the same function as the antibody of the present invention. These mutant forms include (but are not limited to) deletion, insertion and / or substitution of one or more amino acids (usually 1-50, preferably 1-30, more preferably 1-20, most preferably 1-10), and addition of one or more amino acids (usually 20 or less, preferably 10 or less, more preferably 5 or less) at the C-terminus and / or N-terminus. For example, when substituted by amino acids with similar or similar performance in the art, it usually does not change the function of the protein. As another example, addition of one or more amino acids at the C-terminus and / or N-terminus also usually does not change the function of the protein. The term further includes active fragments and active derivatives of the antibody of the present invention.
[0093] Variant forms of the polypeptide include homologous sequences, conservative variants, allelic variants, naturally occurring mutants, induced mutants, proteins capable of hybridizing to the coating DNA of the antibody of the present invention under high or low stringency conditions, and polypeptides or proteins obtained by using antisera against the antibody of the present invention.
[0094] The present invention further provides other polypeptides, such as fusion proteins comprising a human antibody or a fragment thereof. In addition to substantially full-length polypeptides, the present invention further includes fragments of the antibodies of the present invention. Typically, the fragments have at least about 50 contiguous amino acids of an antibody of the present invention, preferably at least about 50 contiguous amino acids, more preferably at least about 80 contiguous amino acids, and most preferably at least about 100 contiguous amino acids.
[0095] The present invention further provides a polynucleotide molecule encoding the above antibody or its fragment or its fusion protein. The polynucleotide of the present invention can be in the form of DNA or RNA. The DNA form includes cDNA, genomic DNA or artificially synthesized DNA. The DNA can be single-stranded or double-stranded. The DNA can be coding strand or non-coding strand.
[0096] A polynucleotide encoding a mature polypeptide of the present invention includes a coding sequence encoding only the mature polypeptide, a coding sequence for the mature polypeptide and various additional coding sequences, a coding sequence for the mature polypeptide (and optional additional coding sequences) and non-coding sequences. The term "polynucleotide encoding a polypeptide" may include a polynucleotide that encodes the polypeptide, or it may be a polynucleotide that further comprises additional coding and / or non-coding sequences.
[0097] The present invention further relates to polynucleotides that hybridize with the above sequences and have at least 50%, preferably at least 70%, more preferably at least 80% identity between the two sequences. The present invention particularly relates to polynucleotides that can hybridize with the above polynucleotides of the present invention under stringent conditions. In the present invention, "stringent conditions" refers to (1) hybridization and elution at lower ionic strength and higher temperature, such as 0.2xSSC, 0.1% SDS, 60oC, or (2) addition of a denaturing agent during hybridization, such as 50% (v / v) formamide, 0.1% calf serum / 0.1% Ficoll, 42oC, or (3) hybridization that occurs only when the identity between the two sequences is at least 90% or more, more preferably 95% or more. Furthermore, the polypeptides encoded by the hybridizable polynucleotides have the same biological functions and activities as the mature polypeptides.
[0098] The full-length nucleotide sequence of the antibody of the present invention or its fragments can usually be obtained by PCR amplification, recombinant methods or artificial synthesis.Especially when the length of the fragment is short, a feasible method is to use artificial synthesis to synthesize the relevant sequence.Generally, multiple small fragments are first synthesized, and then connected to obtain a very long fragment of sequence.In addition, the coding sequence of the heavy chain and an expression tag (e.g., 6His) can be fused to form a fusion protein.
[0099] Once the relevant sequence is obtained, recombinant methods can be used to obtain the relevant sequence in large quantities. Typically, this is achieved by cloning it into a vector, then transforming it into a cell, and then isolating the relevant sequence from the host cell that has been propagated by conventional methods. The biological molecules involved in the present invention (nucleic acids, proteins, etc.) include biological molecules that exist in isolated form.
[0100] Currently, DNA sequences encoding the proteins of the present invention (or fragments or derivatives thereof) can be obtained entirely by chemical synthesis. The DNA sequences can then be introduced into a variety of existing DNA molecules (or vectors, etc.) and cells known in the art. Furthermore, mutations can be introduced into the protein sequences of the present invention by chemical synthesis.
[0101] The present invention further relates to vectors containing said appropriate DNA sequences and appropriate promoter or control sequences, which can be used to transform appropriate host cells so as to express the protein.
[0102] The host cell may be a prokaryotic cell, such as a bacterial cell, or a lower eukaryotic cell, such as a yeast cell, or a higher eukaryotic cell, such as a mammalian cell. Representative examples include bacterial cells of E. coli, Streptomyces, Chinese hamster bacteria, fungal cells such as yeast, insect cells of Drosophila S2 or Sf9, animal cells such as CHO, COS7 and 293 cells, etc.
[0103] Transformation of host cells with recombinant DNA can be carried out by conventional techniques well known to those skilled in the art. When the host is a prokaryote such as E. coli, competent cells capable of absorbing DNA can be obtained by treating with CaCl2 method after exponential growth phase, the steps used being well known in the art. Another method is to use MgCl2. Transformation can also be carried out by electroporation method if necessary. When the host is a eukaryote, DNA transfection methods such as calcium phosphate co-precipitation method, conventional mechanical methods such as microinjection and electroporation, liposome packaging, etc. can be selected.
[0104] The obtained transformant can be cultured in a conventional manner to express the polypeptide encoded by the gene of the present invention. Depending on the host cell used, the medium used for the culture can be selected from a variety of conventional media. The culture is performed under conditions suitable for the growth of the host cell. After the host cell has grown to an appropriate cell density, the selected promoter is induced using an appropriate method (e.g., temperature change or chemical induction), and the cell is further cultured for a certain period of time.
[0105] The recombinant polypeptide in the method can be expressed intracellularly or in the cell membrane, or secreted extracellularly. If necessary, the recombinant protein can be isolated and purified by various isolation methods using physical, chemical and other properties. These methods are well known to those skilled in the art. Examples of these methods include, but are not limited to, conventional renaturation, treatment with protein precipitants (salting out), centrifugation, osmotic sterilization, ultratreatment, ultracentrifugation, molecular sieve chromatography (gel filtration), adsorption chromatography, ion exchange chromatography, high performance liquid phase chromatography (HPLC) and various other liquid chromatography techniques, as well as combinations of these methods.
[0106] The antibodies of the present invention can be used alone, can be conjugated or coupled to a detectable marker (for diagnostic purposes), a therapeutic agent, a PK (protein kinase)-modifying moiety, or any combination of these substances.
[0107] Detectable markers for diagnostic purposes include, but are not limited to, fluorescent or luminescent markers, radioactive markers, MRI (magnetic resonance imaging) or CT (computed tomography) contrast agents, or enzymes capable of producing a detectable product.
[0108] Therapeutic agents that can be bound or coupled to the antibodies of the present invention include, but are not limited to, 1. radionuclides, 2. biological toxins, 3. cytokines such as IL-2, 4. gold nanoparticles / nanorods, 5. viral particles, 6. liposomes, 7. nanomagnetic particles, 8. prodrug activating enzymes (e.g., DT-diaphorase (DTD) or biphenyl hydrolase-like protein (BPHL)), 10. chemotherapeutic agents (e.g., cisplatin) or any form of nanoparticles, etc.
[0109] Immunoconjugates The present invention provides an immunoconjugate based on the antibody of the present invention, preferably said immunoconjugate is an antibody-drug conjugate (ADC).
[0110] Typically, the antibody drug conjugate comprises the antibody and an effector molecule, the antibody being coupled to the effector molecule, preferably by chemical coupling, where the effector molecule is preferably a drug having therapeutic activity. Furthermore, the effector molecule may be one or more of the following: a toxic protein, a chemotherapeutic drug, a small molecule drug, or a radionuclide.
[0111] The antibody of the present invention can be coupled to the effector molecule via a coupling agent. Examples of the coupling agent may be any one or more of a non-selective coupling agent, a coupling agent using a carboxyl group, a peptide chain, or a coupling agent using a disulfide bond. The non-selective coupling agent refers to a compound that covalently bonds an effector molecule to an antibody, such as glutaraldehyde. The coupling agent using a carboxyl group may be any one or more of a cis aconitic anhydride coupling agent (e.g., cis aconitic anhydride) or an acylhydrazone coupling agent (the coupling site is an acylhydrazone).
[0112] Certain residues on the antibody (e.g., Cys or Lys, etc.) are used to bind various functional groups, including imaging agents (e.g., chromophores and fluorophores), diagnostic agents (e.g., MRI contrast agents and radioisotopes), stabilizers (e.g., glycol polymers), and therapeutic agents. The antibody can be coupled to a functional agent to form an antibody-functional agent conjugate. The functional agent (e.g., drug, detection agent, stabilizer) is coupled (covalently bound) to the antibody. The functional agent can be directly bound to the antibody or indirectly bound via a linker.
[0113] Antibodies can be coupled to drugs to form antibody drug conjugates (ADCs). Typically, ADCs include a linker located between the drug and the antibody. The linker can be a degradable or non-degradable linker. Degradable linkers are usually susceptible to degradation in the intracellular environment, e.g., at a site of interest that degrades the linker, thereby releasing the drug from the antibody. Suitable degradable linkers include, for example, enzymatically degradable linkers, including peptidyl-containing linkers that can be degraded by intracellular proteases (e.g., lysosomal or endosomal proteases), or sugar linkers, such as glucuronide-containing linkers that can be degraded by glucuronidase. Peptidyl linkers can include, for example, dipeptides such as valine-citrulline, phenylalanine-lysine, or valine-alanine. Other suitable degradable linkers include, for example, pH-sensitive linkers (e.g., linkers that hydrolyze at a pH below 5.5, e.g., hydrazone linkers) and linkers that can be degraded under reducing conditions (e.g., disulfide bond linkers). Non-degradable linkers typically release the drug under conditions where the antibody is hydrolyzed by proteases.
[0114] The drug can be any cytotoxic, cell growth inhibitory or immunosuppressive drug. In an embodiment, the linker is attached to the antibody and the drug, and the drug has a functional group that can form a bond with the linker. For example, the drug can have an amino group, a carboxyl group, a sulfhydryl group, a hydroxyl group, or a keto group that can form a bond with the linker. When the drug is directly attached to the linker, the drug has a reactive active group before being attached to the antibody.
[0115] Useful drug classes include, for example, antitubulin agents, DNA minor groove binding agents, DNA replication inhibitors, alkylating agents, antibiotics, antifolates, antimetabolites, chemosensitizers, topoisomerase inhibitors, vinca alkaloids, and the like. Examples of particularly useful classes of cytotoxic drugs include, for example, DNA minor groove binding agents, DNA alkylating agents, and tubulin inhibitors; typical cytotoxic drugs include, for example, auristatins, camptothecins, duocarmycins, etoposides, maytansines and maytansinoids (e.g., DM1 and DM4), taxanes, benzodiazepines or benzodiazepine containing drugs (e.g., pyrrolo[1,4]benzodiazepines (PBDs), indolinobenzodiazepines and oxazolidinobenzodiazepines), and vinca alkaloids.
[0116] In the present invention, the drug-linker can form an ADC in one simple step. In other embodiments, bifunctional linker compounds can be used to form an ADC in a two-step or multi-step manner. For example, a cysteine residue is reacted with a reactive moiety of the linker in a first step, and a functional group on the linker is reacted with the drug in a subsequent step to form the ADC.
[0117] The present invention provides methods for preparing an antibody conjugate (ADC), which may further include combining an antibody with a drug-linker compound under conditions sufficient to form an ADC. In certain embodiments, the methods of the invention comprise conjugating an antibody with a bifunctional linker compound under conditions sufficient to form an antibody-linker conjugate. In these embodiments, the methods of the invention further comprise conjugating the antibody-linker conjugate to a drug moiety under conditions sufficient to attach the drug moiety to the antibody via the linker.
[0118] In some embodiments, an antibody drug conjugate ADC has the molecular formula: [ka] Where: Ab is an antibody, LU is a linker, D is a drug, The subscript p is selected from the values 1 to 8.
[0119] Pharmaceutical Compositions The present invention further provides a composition. In a preferred embodiment, the composition is a pharmaceutical composition, which comprises the above-mentioned antibody or its active fragment or its fusion protein, and a pharma-ceutically acceptable carrier. Usually, these substances can be formulated in a non-toxic, inert, pharma-ceutically acceptable aqueous carrier medium, where the pH is usually about 5-8, preferably about 6-8, and the pH value varies depending on the nature of the substance to be formulated and the disease to be treated. The formulated pharmaceutical composition can be administered by a conventional route, where it includes (but is not limited to) intratumoral, intraperitoneal, intravenous, or topical administration.
[0120] The pharmaceutical composition of the present invention can be used directly to bind to the PD-L1 protein molecule and thus can be used to prevent and treat tumors, and can also be used simultaneously with other therapeutic agents.
[0121] The pharmaceutical composition of the present invention comprises a safe and effective amount (e.g., 0.001-99 wt%, preferably 0.01-90 wt%, more preferably 0.1-80 wt%) of the above-mentioned monoclonal antibody of the present invention (or a conjugate thereof) and a pharma- ceutically acceptable carrier or excipient. Such carriers include, but are not limited to, saline, buffer, glucose, water, glycerol, ethanol, and combinations thereof. The drug formulation must be consistent with the method of administration. The pharmaceutical composition of the present invention can be prepared in the form of an injection by conventional methods, for example, using saline or an aqueous solution containing glucose and other adjuvants. Pharmaceutical compositions such as injections and solutions must be prepared under sterile conditions. The dosage of the active ingredient is a therapeutically effective amount, for example, about 1 μg / kg body weight to about 5 mg / kg body weight daily. In addition, the bispecific antibody of the present invention can also be used with other polypeptides.
[0122] In another specific embodiment, the pharmaceutical composition further comprises an additional active ingredient, preferably, said active ingredient comprises a small molecule compound, a cytokine, an antibody (e.g., an anti-PD-1 antibody, an anti-OX40 antibody, an anti-CD137 antibody, an anti-CD47 antibody, an ADC, a CAR-immune cell).
[0123] In another specific embodiment, the compositions used to treat cancer, an inflammatory disease, disease or condition, an immune disease, disease or condition, an autoimmune disease, disease or condition, or an infectious disease, disease or condition can be used in combination with another agent, including, but not limited to, chemotherapy, anti-CD20 mAb, anti-TIM-3 mAb, anti-LAG-3 mAb, anti-CD73 mAb, anti-CD47 mAb, anti-DLL3 mAb, anti-FRmAb mAb, anti-CTLA-4 antibody, anti-PD-1 antibody, PD-1 / PD-L1 therapy, other immuno-oncology agents, anti-angiogenesis agents, radiation therapy, antibody-drug conjugates (ADC), targeted therapy, or other anti-cancer agents. Anti-PD-L1 antibodies can be combined with partner mAbs against targets such as PD-1, OX40, CD137, LAG3, TIM-3, CTLA-4, EGFR, HER-2, CD19, CD20, CD33, CD73, CD47, DLL-3, CLDN18.2, folate receptor alpha (FOLR1), and / or other tumor surface antigens to construct bispecific antibodies to treat cancers / tumors that express PD-L1 and certain tumor-associated antigens.
[0124] When using a pharmaceutical composition, a safe and effective amount of the immunoconjugate is administered to a mammal, where the safe and effective amount is usually at least about 10 μg / kg body weight and in most cases will not exceed about 8 mg / kg body weight, and preferably the dosage is from about 10 μg / kg body weight to about 1 mg / kg body weight. Of course, the specific dosage must take into account factors such as the route of administration and the health condition of the patient, all of which are within the skill of a skilled physician.
[0125] Applicable Other methods of the invention are used to treat patients exposed to a particular toxin or pathogen.Accordingly, another aspect of the invention provides a method for preventing and / or treating a tumor or an infectious disease in a subject comprising administering to the subject a PD-L1-binding molecule of the invention to prevent and / or treat the tumor or infectious disease in said subject.
[0126] In another preferred embodiment, the pharmaceutical composition is used for the preparation of a medicament for treating a tumor, the tumor being selected from the group consisting of bladder cancer, brain cancer, e.g., low-grade glioma, glioma such as glioblastoma, cervical cancer, breast cancer, colon cancer, rectal cancer, endometrial cancer, kidney cancer, renal cell carcinoma, renal pelvis cancer, leukemia, lung cancer, non-small cell lung cancer, melanoma, non-Hodgkin's lymphoma, pancreatic cancer, prostate cancer, ovarian cancer, fibrosarcoma, acute lymphoblastic leukemia (ALL), acute myeloid leukemia (AML), chronic lymphocytic leukemia (CLL), chronic myeloid leukemia (CML), multiple myeloma, bone marrow derived tumors, and thyroid cancer.
[0127] Similar to the tumor applications described above, the PD-L1 antibodies of the present invention can be used alone or as adjuvants in combination with vaccines to stimulate immune responses against pathogens, toxins, and self-antigens. Examples of pathogens for which the therapy is particularly applicable include those for which there is currently no effective vaccine or for which conventional vaccines are not sufficiently effective, including, but not limited to, H1V, hepatitis viruses (A, B, C), influenza virus, herpes virus, giardia, malaria, leishmania, Staphylococcus aureus, and Pseudomonas aeruginosa. PD-L1 blockade is particularly useful against established infections with pathogens such as HIV, which present altered antigens upon infection. When anti-human PD-L1 antibodies are administered, these novel epitopes are identified as foreign, thereby eliciting a strong T cell response independent of the negative signaling influence of PD-L1.
[0128] Preferably, the antibody of the present invention can be used to treat an infectious disease. The infectious disease treated by the antibody of the present invention can be selected from the group consisting of HIV, hepatitis (A, B, C), and tuberculosis. In all of the above methods, the PD-L1 antibodies of the invention may be combined with other forms of immunotherapy, such as cytokine therapy (e.g. interferon, GM-CSF, G-CSF, IL-2) or bispecific antibody therapy, which provides enhanced presentation of tumor antigens.
[0129] Hybridoma cell lines The present invention further provides hybridoma cell lines capable of producing monoclonal antibodies against the PD-L1 protein of the present invention, preferably, the present invention provides hybridoma cell lines with high titer monoclonal antibodies against the PD-L1 protein.
[0130] After obtaining a hybridoma that produces a monoclonal antibody against the PD-L1 protein of the present invention, a person skilled in the art can easily use the hybridoma to prepare the antibody. Moreover, a person skilled in the art can easily know the structure of the antibody of the present invention (e.g., the heavy chain variable region and the light chain variable region of the antibody), and then prepare the monoclonal antibody of the present invention by recombinant methods.
[0131] Methods and samples The present invention relates to a method for detecting tumors in a lysed sample of cells and / or tissues, the steps of which are broadly as follows: obtaining a cell and / or tissue sample, lysing the sample in a medium, and detecting the level of PD-L1 protein in the lysed sample. In the detection method of the present invention, the sample used is not particularly limited, and a representative example is a cell-containing sample present in a cell preservation solution.
[0132] kit The present invention further provides a kit comprising the antibody (or fragment thereof) of the present invention or the detection plate of the present invention, and in a preferred embodiment of the present invention, the kit further comprises a container, an instruction manual, a buffer, and the like. The present invention further designs a detection kit for detecting PD-L1 levels, which includes an antibody for identifying PD-L1 protein, a dissolution medium for dissolving the sample, various buffers, detection labels, detection substrates, and other common reagents and buffers required for detection, etc. The detection kit can be an in vitro diagnostic device.
[0133] The main advantages of the present invention are: (a) The anti-PD-L1 protein antibodies of the invention have unique epitopes and target the IgC-like functional segment, distinct from known PD-L1 monoclonal antibodies that target the IgV functional segment, such as atezolizumab, durvalumab, BMS-963559 and avelumab. (b) The anti-PD-L1 protein antibodies of the present invention can specifically recognize membrane-type PD-L1, and maximally avoid secreted sPD-L1. (c) The anti-PD-L1 protein antibodies of the present invention have anti-drug resistance against tumors that secrete sPD-L1. (d) The anti-PD-L1 protein antibodies of the present invention can enhance ADCC function. (e) The anti-PD-L1 protein antibodies of the present invention have tumor-killing effect. (f) The co-administration of the PD-L1 antibodies of the present invention, or in combination with other anti-tumor drugs, improves the therapeutic efficacy of immunotherapy by providing a selective method for tumors that are resistant to blocking PD-L1 antibody drugs.
[0134] The present invention will be further described below in conjunction with specific examples. It should be understood that these examples are only used to illustrate the present invention and do not limit the scope of the present invention. In the following examples, the experimental methods that do not show specific conditions are usually in accordance with conventional conditions, such as those described in Sambrook et al., Molecular Cloning: A Laboratory Manual (New York: Cold Spring Harbor Laboratory Press, 1989), or conditions suggested by manufacturers. Unless otherwise specified, percentages and parts are calculated by weight percentages and parts by weight.
[0135] Primer sequences and expression host cells Table 1. Human or mouse PD-L1 / PD-1 specific primers [Table 2]
[0136] Gene Expression Host Cells and Experimental Uses Table 2. Gene expression host cells and experimental uses [Table 3]
[0137] Table 3. Antibodies involved in the present invention [Table 4]
[0138] Cell lines and cell culture conditions MC38 are mouse colon cancer cells, HEK293 are human fetal kidney cells, both obtained from Shanghai Gaining Biological Co., Ltd. and grown in DMEM + 10% fetal bovine serum medium, CHO-K1 are Chinese hamster ovary cells, provided by Hangzhou Huabo Co., Ltd. and grown in RPMI1640 + 10% fetal bovine serum medium.
[0139] Cell fluorescent antibody labeling and cell flow cytometry detection MC38 / CHO-K1 cells express PD-L1 and IgC-like, respectively, as positive detection cells. MC38 / CHO-K1 cells wild type and expressing PD-L2 are used as negative controls. Mouse immunized serum (1:100, 1:1000, 1:10000) or antibody clone hybrid tumor cell culture supernatant (50 μl), or mouse monoclonal antibodies (concentrations shown in the figures) and their humanized antibodies (concentrations shown in the figures) were added at approximately 1 × 10 5 The negative and positive detection cells were labeled with 100% PBS and incubated at 4°C for 15 min. After washing with PBS, PE-conjugated goat anti-mouse antibody (BD biosciences) was added for labeling and incubated at 4°C in the dark for 15 min. After washing again with PBS, the cells were detected by cell flow cytometry (NovoCyte, Aceabio, Hangzhou).
[0140] PD-L1 cell ELISA, direct PD-L1 protein ELISA, and secreted sPD-L1 indirect ELISA Screening for PD-L1 antibody subclones by established cell ELISA. In a 96-well cell culture plate, 5000 positive cells are plated in each well and cultured at 37℃ in a CO2 cell incubator for 2 days. PBS is added to wash the cells, and the culture plate is centrifuged at 1500 rpm for 3 minutes, washing twice in total. Mouse immunized serum or antibody clone hybrid tumor cell culture supernatant is added and incubated at 4℃ for 1 hour. Wash twice again with PBS, add HRP-conjugated goat anti-mouse secondary antibody (Proteintech, Wuhan, 1:1000 dilution), and incubate at 4℃ for 30 minutes. After washing twice with PBS, TMB is added to develop color, and 1M HCl is used to stop the color reaction. The presence or absence of PD-L1 antibody in the supernatant is detected via the absorbance value at 450 wavelength using a microplate reader (Synergy LX, Biotek, USA).
[0141] Analyze whether PD-L1 antibodies bind to sPD-L1 by established direct protein ELISA. As previously done, 50ng of PD-L1-3-HIS or PD-L1-9-HIS per well is coated onto a 96-well plate with high protein affinity and incubated overnight at 4℃. Discard the supernatant and add 100ul of PBS+Tween20 (0.05%) to each well to wash the 96-well plate three times. Add 100μl of PBS+1%BSA to each well and incubated at room temperature for 4 hours. After discarding the supernatant, add 50μl of antibody clone hybridoma cell culture supernatant to each well and incubate overnight at 4℃. After discarding the supernatant, add 100μl of PBS+Tween20 (0.05%) to each well to wash the 96-well plate five times. Add HRP-conjugated goat anti-mouse secondary antibody (Proteintech, 1:1000 dilution) and incubate at room temperature for 2 hours. After adding TMB to develop color, the absorbance value at 450 wavelength is used to detect whether the antibody binds to sPD-L1.
[0142] Secreted sPD-L1 (native form) ELISA is used to further clarify the affinity of the antibody to sPD-L1. As previously done, native form sPD-L1 is expressed and secreted by MC38 cells. Cell culture supernatant containing sPD-L1 is used to detect the affinity of PD-L1 antibody. Purified PD-L1 monoclonal antibody (0.2μg / well) is coated overnight at 4℃. MC38 cell culture supernatant expressing sPD-L1-3 and / or sPD-L1-9 is added 100μl / well. After washing overnight at 4℃, 100μl / 0.1μg / well of biotinylated PD-L1 antibody (Biolegend, USA) is added and incubated at room temperature for 2 hours. After washing, streptavidin-HRP (1:20000, Jackson ImmunoResearch, USA) is added and incubated at room temperature for 2 hours. 70μl / well TMB substrate is added to develop color, then 35μl / well 1M HCl is added to stop the reaction. The binding ability of the antibody to sPD-L1 is detected by the absorbance value at 450 wavelength.
[0143] Cell binding assay To analyze the effect of PD-L1 antibody on the interaction between PD-L1 and PD-1, MC38 and CHO-K1 cells are transfected to express human PD-L1 and PD-1, respectively. According to the cell fluorescent staining labeling method of the US EMD company, MC38 and CHO-K1 cells expressing PD-L1 are labeled by PKH67, and MC38 and CHO-K1 cells expressing PD-1 are labeled by PKH26. The two different labeled cells are co-cultured for 1 hour in the presence or absence of PD-L1 or isotypic antibody. The effect of PD-L1 antibody on the interaction between PD-L1 and PD-1 is detected by cell flow cytometry. The double positive labeled cell clusters indicate that PD-L1 has bound to PD-1. Additionally, MC38 and CHO-K1 cells expressing human PD-L1 are labeled by PKH26, and MC38 and CHO-K1 cells expressing human PD-1 are labeled by PKH67. MC38 cells expressing PD-L1 but a different marker were co-cultured with MC38 cells expressing PD-1 but a different marker, and the double positively labeled cell clusters represent non-specific binding (background control).
[0144] ADCC detection Through Jurkat NFAT-Luciferase-CD16 provided by iCarTab Biotechnology (Suzhou), the antibody Fc-induced CD16 activation and activation of the intracellular NF-AT signaling pathway and the production of reporter gene luciferase were measured to quantitatively detect the antibody Fc effector function. Under different concentrations of humanized PD-L1 antibody, approximately 1.25 × 10 4Mix 1 well of CHO-K1 target cells expressing PD-L1 with effector cells expressing human FcγRIIIa at a ratio of 1:10. Culture in a cell incubator for 10 hours. Add 75μl / well of Bright Lite™ luciferase substrate (VAZYME BIOTECH, Nanjing) and incubate at room temperature for 5-30 minutes. Quantitatively analyze the ADCC function induced by antibody Fc by detecting the luminescence intensity with a photometer (Synergy LX).
[0145] Preparation of anti-PD-L1 antibodies Antibodies with high affinity that bind to the IgC-like region of PD-L1 are obtained by generating, purifying and validating primary antibodies. Table 4. Amino acid sequences of the heavy chain variable region, HCDR, light chain variable region and LCDR of the anti-PD-L1 antibodies of the invention [Table 5-1] [Table 5-2]
[0146] Example 1. Preparation of anti-PD-L1 antibodies Step 1: Establishment of PD-L1 / PD-1 and PD-L1-IgC-like fragment expressing cell lines Human or mouse-derived PD-L1, PD-1 and PD-L2 gene templates are obtained from Changsha YouBio. Each gene and gene fragment is amplified by PCR using gene-specific primers (e.g., as shown in Table 1).
[0147] The amplified PCR products are digested and inserted into the same pcDNA4 plasmid (Thermofisher, USA) digested with T4 DNA ligase. The pcDNA4 plasmid vectors expressing genes and gene fragments are transfected into different expression host cells respectively for resistance screening. Here, the plasmid vectors containing PD-L1, IgC-like, PD-L2, or PD-1 gene fragments are transfected into CHO-K1 and MC38 cells respectively, the plasmid vectors containing sPD-L1-3 and sPD-L1-9 gene fragments are transfected into MC38 cells respectively, and the plasmid vectors containing sPD-L1-3-HIS and sPD-L1-9-HIS gene fragments are transfected into HEK293 cells respectively. The host cells and applications of PD-L1, IgC-like, PD-L2, or PD-1 gene expression are as shown in Table 2.
[0148] Step 2: Preparation of monoclonal hybridoma cells Mice are immunized in two ways with a plasmid vector expressing hPD-L1 (amino acids 19-290) and a CHO-K1 cell line highly expressing IgC-like (amino acids 132-290), respectively. The serum is diluted 1:100, 1:1000, and 1:10000, and the MC38 expressing PD-L1 cells (positive cells), MC38 wild-type and PD-L2 expressing cells (negative cells) are used to detect the titer of specific antibodies in the mouse serum by cell flow cytometry. Mice with positive serum are selected for cell fusion. The antibody specificity and titer of the culture supernatant are detected by direct PD-L1 protein ELISA and positive and negative cell flow cytometry. Qualified mother clones and subclones are selected to further obtain monoclonal hybridoma cells. The binding ability of these antibodies will be further detected using sPD-L1 protein, and human PD-L1 mouse monoclonal antibodies with no or reduced sPD-L1 affinity will be screened, particularly the mouse IgG2a and IgG2b subtypes that have ADCC and CDC functions.
[0149] Step 3: Preparation of anti-PD-L1 monoclonal antibodies Monoclonal antibodies are obtained by intraperitoneal injection of monoclonal hybridoma cells, preparation of ascites fluid, and purification by protein A affinity chromatography.
[0150] Step 4: Anti-human PD-L1 mouse monoclonal antibody heavy and light chain variable region DNA sequencing, as well as its humanization, expression and purification Briefly, total RNA is obtained from hybridoma cells producing mouse monoclonal antibodies. Using gene-specific primers, heavy and corresponding light chain variable region DNA is obtained by reverse transcription and PCR reaction, and the target genes are inserted into pCR™ vector plasmids by TOPO TA clone method and sequenced. The humanization of the variable region of mouse monoclonal antibodies includes CDR grafting and back mutation, and is grafted to human IgG1, к. After the humanized antibody sequence is synthesized, humanized heavy and light chain antibody expression vectors pcDNA3.1 (Thermofisher) are constructed respectively, and at the same time, a human-mouse chimeric antibody expression vector is constructed as a control. The heavy and light chain expression plasmids are co-transfected into HEK293 cells. The cell line secreting the antibody is further amplified. The culture supernatant containing the antibody is purified by protein A affinity chromatography.
[0151] Example 2: Screening of PD-L1 Mouse Monoclonal Antibodies PD-L1 mouse monoclonal antibodies with strong binding ability to human PD-L1 and IgC-like were screened by flow cytometry. MC38 cells expressing PD-L1 and IgC-like respectively were used as positive detection cells. MC38 cells express human PD-L2, and MC38 parent cells were used as negative control.
[0152] Antibody clone: Hybridoma cell culture supernatant (50 μl) or mouse monoclonal antibody (100 ng) at approximately 1 × 10 5Negative and positive detection cells are labeled and incubated at 4°C for 15 minutes. After washing with PBS, PE-conjugated goat anti-mouse antibody (BD biosciences) is added for labeling and incubated in the dark at 4°C for 15 minutes. After washing with PBS, cells are detected by flow cytometry.
[0153] As shown in Figure 3A, PD-L1 mouse monoclonal antibody clone 130021 (R&D systems) binds to PD-L1 and IgC-like. PD-L1 mouse monoclonal antibody clone 29E.2A3 (Biolegend) binds only to PD-L1 but does not recognize the IgC-like segment, indicating that its recognition region is only in IgV. As shown in Figure 3B, five monoclonal antibodies that bind to PD-L1 and recognize IgC-like were screened from 33 PD-L1 mouse monoclonal antibodies by cell flow cytometry, respectively, and were screened from mAb#4, mAb#11, mAb#15, mAb#19 and mAb#23.
[0154] Example 3: Affinity of PD-L1 mouse monoclonal antibodies to PD-L1, the effect of sPD-L1 on affinity Direct PD-L1 protein ELISA detects the affinity of PD-L1 antibody to recombinant protein PD-L1. Recombinant protein PD-L1-3-HIS and PD-L1-9-HIS are expressed in HEK293 cells, and the culture supernatant is passed through a Ni column to purify rPD-L1-HIS. 50ng of PD-L1-3-HIS or PD-L1-9-HIS is coated into each well of a 96-well plate with high protein affinity and incubated overnight at 4℃. Discard the supernatant and add 100ul of PBS+Tween20 (0.05%) to each well to wash the 96-well plate three times. Add 100μl of PBS+1%BSA to each well and incubate at room temperature for 4 hours. After discarding the supernatant, add 100μl (100ng) of monoclonal antibody to each well and incubate overnight at 4℃. After discarding the supernatant, add 100μl of PBS+Tween20 (0.05%) to each well to wash the 96-well plate 5 times. Add HRP-conjugated goat anti-mouse secondary antibody (Proteintech, 1:1000 dilution) and incubate at room temperature for 2 hours. After adding TMB for color development, the absorbance value at 450 wavelength is used to detect whether the antibody binds to sPD-L1. Direct ELISA is used to detect the binding ability of five PD-L1 mouse monoclonal antibodies mAb#4, mAb#11, mAb#15, mAb#19 and mAb#23 to recombinant protein PD-L1 (rPD-L1).
[0155] The experimental results are shown in Figure 4A, which show that none of the five PD-L1 mouse monoclonal antibodies bound to PD-L1-3-HIS, and the mouse monoclonal antibody mAb#19 had the weakest binding ability to PD-L1-9-HIS.
[0156] Detect the blocking effect of recombinant protein PD-L1-3-HIS (rPD-L1-3-HIS) and PD-L1-9-HIS on five PD-L1 mouse monoclonal antibodies by cell flow cytometry. 200ng of recombinant protein PD-L1-3-HIS (14 times the moles of antibody) or recombinant protein PD-L1-9-HIS (10 times the moles of antibody) was pre-incubated with 100ng of PD-L1 mouse monoclonal antibodies mAb#4, mAb#11, mAb#15, mAb#19 and mAb#23 respectively at 4℃ for 2 hours, and then pre-incubated with PD-L1 expressing MC38 cells for 30 minutes.
[0157] The experimental results are shown in Figure 4B, and the results show that rPD-L1-3-HIS cannot block the binding of the five PD-L1 mouse monoclonal antibodies to PD-L1, and rPD-L1-9-HIS can block mAb#4, mAb#15, and mAb#23, but partially inhibits the binding of PD-L1 mouse monoclonal antibodies mAb#11 and mAb#19 to PD-L1 on cells. The mouse monoclonal antibodies can avoid secreted PD-L1-3-HIS and partially avoid PD-L1-9-HIS.
[0158] PD-L1 mouse monoclonal antibody #19 is selected from the five screened mouse monoclonal antibodies, and the effect of recombinant protein PD-L1-9 on the binding of mouse monoclonal antibody #19 to PD-L1 is detected. 100ng of antibody #19 is pre-incubated with recombinant protein rPD-L1-9-HIS at different concentrations (as shown in the figure) for 2 hours at 4℃, and then incubated with MC38 cells expressing PD-L1 for 30 minutes. The effect of rPD-L1-9-HIS on the binding function of PD-L1 mouse monoclonal antibody #19 is analyzed by cell flow cytometry.
[0159] The experimental results are shown in Figure 4C, and the results show that when the molar concentration of recombinant protein PD-L1-9 is 40-fold higher than that of mouse monoclonal antibody mAb#19, mouse monoclonal antibody mAb#19 can still bind to PD-L1, and further show that mouse monoclonal antibody can partially avoid rPD-L1-9-HIS.
[0160] Detect the affinity of PD-L1 mouse monoclonal antibody #19 to native form sPD-L1 by secreted sPD-L1 indirect ELISA. MC38 cells are transfected to express native form sPD-L1. The cell culture supernatant contains native form sPD-L1. Purified PD-L1 monoclonal antibody (0.2μg / well) is coated overnight at 4℃. 100μl / well of MC38 cell culture supernatant expressing sPD-L1-3 or sPD-L1-9 is added. After washing overnight at 4℃, 100μl / 0.1μg / well of biotinylated PD-L1 antibody (Biolegend) is added and incubated at room temperature for 2 hours. After washing, streptavidin-HRP (1:20000, Jackson ImmunoResearch) is added and incubated at room temperature for 2 hours. 70μl / well TMB substrate is added to develop color, then 35μl / well 1M HCl is added to stop the reaction. The binding ability of the antibody to sPD-L1 is detected by the absorbance value at 450 wavelength.
[0161] ELISA detects the affinity of #19 monoclonal antibody to cell culture supernatants containing sPD-L1-3 and sPD-L1-9 (A), sPD-L1-3 (B), or sPD-L1-9 (C). Anti-PD-L1 total recognizes sPD-L1-3 and sPD-L1-9, whereas clone 130021 only binds to sPD-L1-9.
[0162] The experimental results are shown in Figure 5, and the results show that PD-L1 mouse monoclonal antibody #19 specifically recognizes human membrane-type PD-L1 on cells, but does not bind to the native form sPD-L1-3, and its affinity for the native form sPD-L1-9 is much lower than that of clone 130021 (it is noteworthy that the flow cytometry detection in Figures 3A and 3B shows that this antibody has a very low affinity for membrane-type hPD-L1, and is much weaker than PD-L1 mouse monoclonal antibody #19), i.e., it maximally avoids the secreted forms of sPD-L1 (sPD-L1-3 and sPD-L1-9).
[0163] Example 4: Detection of antibody activity in a mouse MC38 tumor model MC38 cells expressing human PD-L1 and secreting human sPD-L1-9 were mixed at a ratio of 20:1, and approximately 5 × 10 5 The cells are subcutaneously injected into C57BL / 6J mice, 6 mice per group. After 7 days, tumor formation is visible, and 100 μg / mouse of isotype antibody or monoclonal antibody #19 (anti-PD-L1 treatment) is intraperitoneally injected, and antibody treatment is performed three times on the 7th, 10th, and 15th days after tumor cell injection, respectively. Tumor size and mouse survival rate are detected periodically. Tumor volume = (length × width) 2 ) / 2. Student's T test and Log-rank test were used to test whether there were significant differences between experimental groups in tumor size and survival rate experiments, respectively.
[0164] The experimental results are shown in Figure 6. The results show that in the MC38 mouse tumor model expressing human PD-L1 and sPD-L1, the PD-L1-specific antibody has anti-drug resistance and anti-tumor effects.
[0165] Example 5: Mouse monoclonal antibody #19 humanized antibody activity Mouse monoclonal antibody #19 is humanized to obtain the humanized antibody. Mouse monoclonal antibody #19 and its humanized amino acid sequence, different heavy chain (A) and light chain (B) Fab amino acid sequences are as shown in Figure 7 and Table 4. Here, VH1, VH2, VH3, VH4, VH5, VH6 are the heavy chain variable regions of mouse monoclonal antibody #19 humanized antibody, and VL1, VL2, VL3, VL4, VL5 are the light chain variable regions of mouse monoclonal antibody #19 humanized antibody.
[0166] 5.1. Affinity of mouse monoclonal antibody #19 humanized antibody to membrane and secreted PD-L1, and IgC-like By detecting the affinity of different heavy chain (H) and light chain (L) combinations to membrane and secreted PD-L1, and IgC-like, the heavy chain (H) and light chain (L) combinations with high affinity are screened, where H6L2, H6L5, H4L4, H5L4, H6L4, H5L5, and H4L5 have the highest affinity.
[0167] Here, the affinity detection of different heavy chain (H) and light chain (L) combinations (H6L2, H6L5, H4L4, H5L4) humanized by membrane and secreted PD-L1, and mouse monoclonal antibody #19 against IgC-like, is shown in Figure 8. Flow cytometry detects the affinity of mouse monoclonal antibody #19 humanized antibody to membrane-type PD-L1 (A) and PD-L1IgC-like (B).
[0168] MC38 cells were transfected to secrete the cell culture supernatants of the native forms sPDL1-3 and sPDL1-9, respectively, and were then subjected to the administration of mouse monoclonal antibody #19 and its chimeric antibody (Chimeric), 130021, anti-PD-L1 total In comparison, the binding ability of humanized mouse monoclonal antibody #19 to secreted sPD-L1 (C and D) is detected by ELISA.
[0169] Experimental results show that the mouse monoclonal antibody #19 humanized heavy chain and light chain combinations (H6L2, H6L5, H4L4, H5L4) bind to PD-L1 and IgC-like, and they do not bind to sPD-L1-3, and have low affinity for sPD-L1-9.
[0170] 5.2. Affinity of mouse monoclonal antibody #19 (humanized antibody) to membrane-type PD-L2 (human) Cell flow cytometry detects the affinity of different heavy chain (H) and light chain (L) combinations humanized by mouse monoclonal antibody #19 to membrane-type PD-L2. The experimental results are shown in Figure 9, H6L2 and H6L5 do not bind to PD-L2, and H5L4 has weak binding to PD-L2 and parental CHO-K1 cells.
[0171] 5.3. Affinity of mouse monoclonal antibody #19 humanized antibody to membrane-type CD80 (human) The affinity of the heavy chain (H) and light chain (L) combination to membrane-type CD80 (human) is detected by cell flow cytometry. The experimental results are shown in FIG. 10, which shows that H6L2 and H6L5 do not bind to CD80.
[0172] 5.4. Affinity of mouse monoclonal antibody #19 and humanized antibody H6L2 to membrane-type PD-L1 5.4.1. Affinity of humanized antibody H6L2 for membrane-type PD-L1 in the presence or absence of rPD-L1-9-HIS The affinity of humanized antibody H6L2 for membrane-type PD-L1 compared to avelumab and atezolizumab, and the effect of the affinity of various concentrations of rPD-L1-9-HIS for H6L2 compared to avelumab and atezolizumab, were detected by cell flow cytometry.
[0173] The experimental results are shown in FIG. 11A, and the measured EC50 of H6L2 was 0.62 μg / ml, the EC50 of avelumab was 0.17 μg / ml, and the EC50 of atezolizumab was 0.21 μg / ml. The experimental results are shown in Figure 11B and C, and show that humanized antibody H6L2 has stronger affinity for anti-sPD-L1-9 than avelumab and atezolizumab.
[0174] 5.4.2. Affinity of humanized antibody H6L2 for membrane-type PD-L1 in the presence or absence of rPD-L1-3-HIS The effect of the affinity of different concentrations of rPD-L1-3-HIS to H6L2 compared with Avelumab and Atezolizumab is detected by cell flow cytometry. As shown in Figure 12, the experimental results show that the humanized antibody H6L2 has stronger affinity for anti-sPD-L1-3 than avelumab and atezolizumab.
[0175] 5.5.Blocking Effect of Humanized Antibody H6L2 on Binding of PD-1 and PD-L1 To analyze the interaction between PD-L1 and PD-1, CHO-K1 cells are transfected to express human PD-L1 and PD-1, respectively. CHO-K1 cells expressing PD-L1 are labeled with PKH67, and CHO-K1 cells expressing PD-1 are labeled with PKH26. The two different labeled cells are co-cultured for 1 hour in the presence or absence of H6L2. The various antibody concentrations are as shown in the figure. The effect of this antibody on the interaction between PD-L1 and PD-1 between cells is detected by cell flow cytometry, and the double-positive labeled cell clusters indicate that PD-L1 has bound to PD-1. At the same time, CHO-K1 cells expressing PD-L1 are labeled with PKH26, while CHO-K1 cells expressing PD-1 are also labeled with PKH67. CHO-K1 cells expressing PD-L1 but a different marker were co-cultured with CHO-K1 cells expressing PD-1 but a different marker, and the double positively labeled cell clusters indicate non-specific binding (background control). The results are shown in Figure 13. Experimental results show that H6L2 cannot block the binding of PD-L1 and PD-1 between cells.
[0176] 5.6. ADCC activity of humanized antibody H6L2 and the effect of secreted sPD-L1 on its ADCC activity As shown in Figure 14, the ability of humanized antibody #19 to induce luciferase activity in the Jurkat-CD16-NFAT-Luciferase platform in the absence (A) or presence (B) of secreted sPD-L1 (recombinant protein rPDL1-3-HIS or rPDL1-9-HIS) is detected, and compared with avelumab. Experimental results show that the humanized antibody H6L2 is superior to avelumab in inducing ADCC activity and its anti-sPD-L1 potency.
[0177] Example 6: Antitumor effect of mouse monoclonal antibody #19 and humanized antibody H6L2 3 to 5×10 5MC38 cells expressing human PD-L1 in mice were subcutaneously injected into C57BL / 6J mice (five mice per group). Tumor formation was observed 7 days later, and the control group was intraperitoneally injected three times with 100μg / mouse of humanized antibody H6L2 or avelumab, or PBS on the 7th, 10th, and 13th days after tumor cell injection, respectively. The results are shown in Figure 15, where A. Tumor size is expressed as the mean value ± standard error of tumor size in each group. B. Survival rate. T-test and log-rank test are used to test whether there are significant differences between experimental groups in tumor size and survival rate experiments, respectively. Experimental results show that the humanized antibody H6L2 has a statistically significant antitumor effect and is significantly superior to avelumab.
[0178] Comparative Example 1: Indirect ELISA detection of the binding ability of the anti-human PD-L1 antibody atezolizumab to the native form of sPD-L1 The binding ability of anti-human PD-L1 antibody atezolizumab to the native form of sPD-L1 is detected by indirect ELISA of secreted sPD-L1, and MC38 cells express sPD-L1-3 or sPD-L1-9, respectively. The binding ability is analyzed by detecting the concentration of sPD-L1 in cell culture supernatants incubated with atezolizumab by ELISA. Serum-free cell culture supernatants containing sPD-L1-3 or sPD-L1-9 are incubated overnight with 1.5μg / ml atezolizumab or human IgG1 (ate treated or hIgG1 treated as indicated), respectively, and protein G agarose (Thermo Fisher) is added and atezolizumab is removed by centrifugation. Supernatants containing sPD-L1-3 or sPD-L1-9 (sPD-L1-3 or sPD-L1-9 as indicated) are used as positive controls without pre-incubation. BL represents no sPD-L1 supernatant as background control. The experimental results are shown in Figure 16, and the results show that atezolizumab can bind to sPD-L1-3 and sPD-L1-9.
[0179] Comparative Example 2. Blocking effect of human PD-L1 antibodies avelumab and atezolizumab on the binding of PD-1 to PD-L1, and the effect of secreted sPD-L1 on the blocking effect To detect the blocking effect of human PD-L1 antibodies avelumab and atezolizumab on the binding of PD-1 to PD-L1, and the influence of secreted sPD-L1 on the blocking effect, CHO-K1 cells are transfected to express human PD-L1 and PD-1. CHO-K1 cells expressing PD-L1 are labeled with PKH67, while CHO-K1 cells expressing PD-1 are labeled with PKH26. The two different labeled cells are co-cultured for 1 hour in the presence of avelumab or atezolizumab, respectively. The various antibody concentrations are as shown in Figure 17. The influence of the two antibodies on the interaction between PD-L1 and PD-1 between cells is detected by cell flow cytometry, and the double-positive labeled cell clusters represent the binding of PD-L1 to PD-1.
[0180] Here, A and B show the effect of avelumab and atezolizumab on the interaction of PD-1 and PD-L1 between cells. C and D show the blocking effect of sPD-L1 on avelumab and atezolizumab. The antibody dose is 100ng / data point, and the rPD-L1-9-HIS dose is as shown in the figure. At the same time, CHO-K1 cells expressing PD-L1 are also labeled with PKH26, while CHO-K1 cells expressing PD-1 are also labeled with PKH67. CHO-K1 cells expressing PD-L1 but with a different marker are co-cultured with CHO-K1 cells expressing PD-1 but with a different marker, and the double positive labeled cell clusters indicate non-specific binding (background control).
[0181] Experimental results show that avelumab and atezolizumab at concentrations above 1 μg / ml can completely block the binding of intercellular PD-L1 and PD-1, and sPD-L1 can weaken or lose the blocking effect of avelumab and atezolizumab, but cannot achieve complete blockade. The results of the comparative examples show that high concentrations (greater than 1 μg / ml) of avelumab and atezolizumab can completely block the interaction between PD-L1 and PD-1, but can also bind to the native form of sPD-L1, thereby reducing the blocking ability of the two monoclonal antibodies and resulting in drug resistance.
[0182] Discussion The Fc segment of an antibody binds to its receptor FcγR, which is expressed on a series of immune cells, such as natural killer cells, monocytes, neutrophils and megakaryocytes. The interaction between Fc and FcγR plays an irreplaceable role in regulating ADCC, CDC, antibody metabolism and titer. DEL amino acid substitution in the Fc CH2 segment by molecular bioengineering can significantly enhance the function of natural killer cells.
[0183] Regarding the role played by blocking PD-L1 antibody Fc in anti-tumor, studies have shown that the PD-L1 blocking antibody (clone 14D8) is replaced with mouse Fc segments with different functions, and although their discrimination specificity, affinity, and metabolic properties do not change, there is a statistically significant difference in the anti-tumor effect. For example, the Fc of 14D8 antibody with IgG2a (i.e., 14D8 / IgG2a) can specifically bind and activate Fc receptors with the function of inhibiting tumor growth, and the two antibodies, 14D8 / IgG1 antibody that binds to inhibitory FcγR receptors, and 14D8 / IgG1-D265A antibody that has lost the ability to bind to Fc receptors, statistically lose the tumor inhibitory effect. Furthermore, compared with wild-type mice, the anti-tumor effect of another blocking PD-L1 antibody (clone 10F.9G2) is significantly weakened in a mouse tumor model that loses activating FcγRs but retains inhibitory FcγRIIb. In mouse tumor models, the antibody is widely used to study the anti-tumor mechanism. These studies indicate that in anti-tumor aspects, the key role of blocking PD-L1 antibodies is in Fc-induced ADCC / CDC activity, and in another aspect, the anti-tumor effect of blocking PD-L1 antibodies by blocking the interaction between PD-L1 and PD-1 is very limited. Our studies show that only higher concentrations of blocking PD-L1 antibodies can achieve complete blockade.
[0184] NK cells are innate immune effector cells that lyse major histocompatibility complex (MHC class I) negative tumor cells and virus-infected cells and orchestrate the innate immune response. NK cells persistently express the lytic system. Thus, NK cells do not require prior activation to kill target cells and play an important role in immune surveillance of mutant or tumor cells.
[0185] ADCC mainly depends on the killing activity of NK cells. Unlike T cells expressing PD-1, NK cells under conditions with various agonistic or inhibitory biomarkers persistently lack PD-1 expression, as detected by various detection methods such as cell flow display, qRT-PCR, and RNA-seq. This feature is beneficial for bypassing the PD-1 / PD-L1 pathway and killing tumor cells expressing PD-L1. This has also led to the development of tumor-targeting antibodies such as rituximab, daratumumab, trastuzumab, and cetuximab that can induce ADCC and effectively treat cancer patients clinically. Compared with avelumab, our antibody strongly induces NK cell activity and shows remarkable antitumor effects. In summary, the functional blockade of PD-L1, the functional recovery of T cells, and the indirect killing effect, as well as the use of ADCC and NK cells to target and directly kill tumor cells expressing PD-L1, may increase the response rate.
[0186] Monoclonal antibodies 130021, #4, #15 and #23 have weaker binding ability to membrane-type PD-L1 on cells than #19, but stronger binding ability to sPD-L1-9 (full extracellular) than #19. This indicates that the affinity to membrane-type PD-L1 on cells does not determine the binding ability to the IgC-like domain of sPD-L1, and vice versa. In addition, the tertiary structures of membrane-type and secreted proteins on cells may not be exactly the same. Experimental results indicate that the antibodies have different affinities to the two types of target proteins, which may provide an opportunity to treat sPD-L1-secreting drug-resistant tumors.
[0187] Based on the drug resistance mechanism of secreted sPD-L1 and their amino acid sequence characteristics, as well as the important role induced by Fc of PD-L1 antibody and NK cells in anti-tumor, the inventors designed a brand new epitope and used it as an immunogen to screen PD-L1-specific monoclonal antibodies against the IgC functional segment of PD-L1, which can maximally avoid sPD-L1, enhance the ADCC / CDC activity of Fc, and have anti-tumor effects. This provides an alternative route or scheme for the treatment and combined administration of tumors that secrete sPD-L1 and cause blocking PD-L1 antibody drug resistance, and has potential implications for improving the therapeutic effect of tumor immunotherapy.
[0188] All documents mentioned in the present invention are incorporated by reference in this application as if each document was incorporated by reference individually. Furthermore, after reading the above teachings of the present invention, those skilled in the art may make various changes or modifications to the present invention, and these equivalents are also included in the scope defined by the appended claims of this application.
Claims
1. A PD-L1 antibody or an active fragment thereof, The antibody does not block the binding of PD-1 to PD-L1, and specifically binds to the IgC-like region of PD-L1 and has an activity of inducing ADCC / CDC functional effect; The PD-L1 antibody or an active fragment thereof (a) the amino acid sequence of LCDR1 set forth in SEQ ID NO: 16, LCDR2 set forth in SEQ ID NO: 17, and LCDR3 set forth in SEQ ID NO: 18; and (b) The PD-L1 antibody or an active fragment thereof, characterized in that it comprises the amino acid sequence of HCDR1 shown in SEQ ID NO: 12, HCDR2 shown in SEQ ID NO: 13, and HCDR3 shown in SEQ ID NO:
14.
2. The PD-L1 antibody or active fragment thereof comprises a heavy chain variable region or a light chain variable region, wherein the polypeptide sequence of the heavy chain variable region is at least 95% identical to the polypeptide sequence shown in SEQ ID NO: 11, 20, 21, 22, 23, 24 or 25, and the polypeptide sequence of the light chain variable region is at least 95% identical to the polypeptide sequence shown in SEQ ID NO: 15, 26, 27, 28, 29 or 30. The PD-L1 antibody or an active fragment thereof according to claim 1.
3. A heavy chain variable region having a polypeptide sequence as set forth in SEQ ID NO: 11, 20, 21, 22, 23, 24 or 25, and a light chain variable region having a polypeptide sequence as set forth in SEQ ID NO: 15, 26, 27, 28, 29 or 30. The PD-L1 antibody or an active fragment thereof according to claim 1 or 2.
4. The PD-L1 antibody or its active fragment is characterized in that it is chimeric. The PD-L1 antibody or an active fragment thereof according to any one of claims 1 to 3.
5. The PD-L1 antibody or its active fragment is characterized in that it is humanized. The PD-L1 antibody or an active fragment thereof according to any one of claims 1 to 4.
6. A recombinant protein comprising: The recombinant protein comprises: (i) a PD-L1 antibody or an active fragment thereof according to any one of claims 1 to 5, and (ii) The recombinant protein, characterized in that it has an optional tag sequence to aid in expression and / or purification.
7. A polynucleotide comprising: The polynucleotide, characterized in that it encodes the PD-L1 antibody or an active fragment thereof according to any one of claims 1 to 5, or the recombinant protein according to claim 6.
8. A vector comprising: A vector comprising the polynucleotide of claim 7.
9. 1. A genetically engineered host cell comprising: A genetically engineered host cell as described above, characterized in that it contains a vector as described in claim 8 or has integrated in its genome a polynucleotide as described in claim 7.
10. 1. An immunoconjugate comprising: The immunoconjugate comprises: (a) the PD-L1 antibody or an active fragment thereof according to claim 1, and (b) the immunoconjugate, comprising a coupling moiety selected from the group consisting of a detectable marker, a drug, a toxin, a cytokine, a radionuclide, or an enzyme.
11. 1. A pharmaceutical composition comprising: The pharmaceutical composition comprises: (a) a PD-L1 antibody or an active fragment thereof according to claim 1, or a recombinant protein according to claim 6, or an immunoconjugate according to claim 10, and (b) the pharmaceutical composition, further comprising a pharma- ceutically acceptable carrier.
12. An immune cell, The immune cell is characterized in that it expresses the PD-L1 antibody or an active fragment thereof according to any one of claims 1 to 3, or is exposed outside the cell membrane.
13. Use of the PD-L1 antibody or active fragment thereof according to claim 1, the immunoconjugate according to claim 10, the pharmaceutical composition according to claim 11, or the immune cell according to claim 12, or a combination thereof, in the manufacture of a medicament for treating a disease associated with PD-L1 expression or dysfunction.
14. The disease associated with PD-L1 expression or dysfunction is characterized in that it is a tumor or an infectious disease.
14. The use according to claim 13.
15. The infectious disease is characterized in that it is caused by a pathogen selected from HIV, Hepatitis virus (A, B, C) and Mycobacterium tuberculosis.
15. The use according to claim 14.
Citation Information
Patent Citations
Anti-PD-L1 antibodies and uses thereof
JP2020518233A