1,3-Cyclohexanedione and 1,3-cyclopentanedione derivatives as buffer molecules in non-aqueous solutions
1,3-cyclohexanedione and 1,3-cyclopentanedione derivatives with buffering properties stabilize chemical compounds in non-aqueous solutions, addressing the lack of effective buffering in such environments and enabling controlled chemical reactions.
Patent Information
- Application Number
- JP2022521961
- Authority / Receiving Office
- JP · JP
- Patent Type
- Patents
- Current Assignee / Owner
- Priority Date
- 2019-10-16
- Filing Date
- 2020-10-15
- Publication Date
- 2025-10-22
- Estimated Expiration
- 2040-10-15
AI Technical Summary
Molecules with buffering properties have not been effectively used in non-aqueous solutions to maintain conditions suitable for chemical reactions, and scavengers lack the ability to remove both acids and bases.
1,3-cyclohexanedione and 1,3-cyclopentanedione derivatives with buffering properties are used in non-aqueous solutions, optionally conjugated to a solid support, to stabilize chemical compounds against isomerization, racemization, and decomposition caused by acids or bases.
These derivatives suppress decomposition, isomerization, and racemization, allowing for stable storage and altered reaction outcomes in non-aqueous solutions, independent of the causative agent, and enable controlled chemical transformations.
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Abstract
Description
[Technical Field]
[0001] The present invention relates to 1,3-cyclohexanedione and 1,3-cyclopentanedione derivatives that have buffering properties in non-aqueous solutions, and the use of the buffering properties of these molecules in non-aqueous solutions to adjust conditions and control chemical events. [Background technology]
[0002] It is common practice to use buffers to control chemical reactions in aqueous solutions or to maintain conditions suitable for enzyme-catalyzed reactions and storage of biological samples such as enzymes and antibodies (Non-Patent Document 1).
[0003] However, molecules with buffering properties have not been commonly used in non-aqueous solutions to maintain conditions suitable for chemical reactions. Scavengers have been used to remove certain molecules from non-aqueous solutions to maintain desired conditions (Non-Patent Documents 2 and 3). However, typical scavenger molecules do not have buffering properties, and a scavenger that removes acids cannot be used to remove bases, and vice versa. [Prior art documents] [Non-patent literature]
[0004] [Non-Patent Document 1] VS Stoll, JS Blanchard, Methods Enzymol. 2009, Vol. 463, p. 43 [Non-patent document 2] R.K. Schmidt, K. Muther, C. Muck-Lichtenfeld, S. Grimme, M. Oestreich, J. Am. Chem. Soc., 2012, Vol. 134, p. 4421 [Non-patent document 3] MJR Richter, M. Schneider, M. Brandstatter, S. Krautwald, EM Carreira, J. Am. Chem. Soc., 2018, vol. 140, pp. 16704 Summary of the Invention
[0005] The present invention relates to 1,3-cyclohexanedione or 1,3-cyclopentanedione derivatives that have a buffering function in non-aqueous solutions, and which may be conjugated to a solid support.
[0006] One aspect of the invention is a method for buffering a non-aqueous solution comprising adding a buffer molecule to the non-aqueous solution, wherein the non-aqueous solution comprises an organic solvent, the buffer molecule is a 1,3-cyclohexanedione derivative or a 1,3-cyclopentanedione derivative, and the buffer molecule is optionally conjugated to a solid support.
[0007] In certain embodiments, the 1,3-cyclohexanedione derivative has Formula I: [ka] It has a structure represented by: In such embodiments, in Formula I, R 1 ~R 5 may each be hydrogen or a substituent, and R 1 ~R 5Any two groups may form a ring.
[0008] In certain embodiments, the 1,3-cyclopentanedione derivative has Formula II: [ka] It has a structure represented by: In such embodiments, in Formula II, R 1 ~R 3 may each be hydrogen or a substituent, and R 1 ~R 3 Any two groups may form a ring.
[0009] In certain embodiments, the substituent is alkyl, cycloalkyl, aryl, heterocycloalkyl, heteroaryl, or acyl, which may be optionally substituted with one or more substituents selected from the group consisting of alkyl, alkenyl, alkynyl, alkoxy, nitro, cyano, halogen, hydroxy, acyl, carboxyl, carboxamide, carboxylic ester, haloalkyl, haloalkoxy, aryl, heterocycloalkyl, and heteroaryl.
[0010] In certain embodiments, the buffer molecule is conjugated to a solid support, which can be a particle, a container, or a device.
[0011] In certain embodiments, the organic solvent is selected from the group consisting of aliphatics, aromatics, alcohols, esters, ethers, ketones, nitriles, and halogenated hydrocarbons.
[0012] In certain embodiments, the method further includes storing the chemical compound in a non-aqueous solution, where an acid or base may cause isomerization, racemization, or decomposition of the chemical compound, and the buffer molecule inhibits the isomerization, racemization, or decomposition.
[0013] In certain embodiments, the method further includes adding at least one reactant to the non-aqueous solution and conducting a chemical reaction involving the reactant, which in such embodiments may produce a product that is different from the product of the reaction conducted without the buffer molecule.
[0014] Another aspect of the present invention is a method for controlling the structural change of a compound in a non-aqueous solution, wherein the structural change of the compound can be caused by an acid or a base, and the method comprises preparing a non-aqueous solution containing the compound and a buffer molecule represented by Formula I or Formula II. The methods include a method for suppressing the structural change of a compound in a non-aqueous solution, and a method for converting a compound into a product having a different structure. The latter method comprises converting the compound into a product having a different structure by reacting two or more molecules of the compound with each other or by reacting the compound with an organic solvent.
[0015] According to another aspect of the present invention, the non-aqueous solution comprises a buffer molecule that is a 1,3-cyclohexanedione derivative or a 1,3-cyclopentanedione derivative and that may be conjugated to a solid support. The non-aqueous solution may comprise a compound that can undergo a structural change in the presence of an acid or a base.
[0016] Another aspect of the invention is an article comprising a solid support and a buffer molecule conjugated to the solid support, wherein the buffer molecule is a 1,3-cyclohexanedione derivative or a 1,3-cyclopentanedione derivative. [Effects of the Invention]
[0017] To suppress decomposition, isomerization, and racemization, the cause (i.e., whether it is an acid or a base, or what type of acid or base) should usually be understood, and different measures should be taken depending on the cause. Using this buffer molecule, there is no need to consider whether the decomposition, isomerization, and / or racemization is caused by a base or an acid, or what type of acid or base causes the decomposition, isomerization, and / or racemization. For example, simply adding a buffer molecule or a buffer molecule conjugated to a solid support to a storage solution of a molecule of interest can suppress both acid- and base-induced decomposition, isomerization, and / or racemization. Furthermore, simply adding a buffer molecule or a buffer molecule conjugated to a solid support to a chemical reaction mixture can also alter the reaction product. [Brief explanation of the drawings]
[0018] [Figure 1] We demonstrate 1,3-cyclohexanedione derivatives, 1,3-cyclopentanedione, and related compounds 1a–1z, and resin-conjugated 1b, as well as their effectiveness in the 1,8-diazabicyclo[5.4.0]undec-7-ene (DBU)-catalyzed isomerization of compound 2 to compound 3 and the trifluoromethanesulfonic acid (TfOH)-catalyzed isomerization of compound 2 to compound 3. [Figure 2] Compounds S1a-S1ee and their effects on the DBU-catalyzed isomerization of compound 2 and the TfOH-catalyzed isomerization of compound 2 are shown. [Figure 3]The effects of 2-methyl-1,3-cyclohexanedione (1b) and related 1,3-cyclohexanedione derivatives on the isomerization and decomposition of compounds are shown. Scheme a) shows the effect on the racemization and decomposition of β-hydroxyketone derivative (aldol) 4. Scheme b) shows the effect on the racemization and decomposition of β-hydroxyketone derivative (aldol) 7. Scheme c) shows the effect on the isomerization of aminoaldehyde derivatives (Mannich reaction products) 10 and 11. Scheme d) shows the effect on the isomerization and decomposition of β-hydroxy α-amino acid derivative 12. [Figure 4] Chemical transformations: The effect of 2-methyl-1,3-cyclohexanedione (1b) on the protection of the hydroxy group of compound 14 is shown. [Figure 5] Chemical transformations: The effect of 2-methyl-1,3-cyclohexanedione (1b) on the addition reactions of compound 14 (Scheme c), compound 18 (Scheme a and Scheme d), and compound 22 (Scheme b) is shown. [Figure 6] Chemical transformations: The effect of 2-methyl-1,3-cyclohexanedione (1b) on the dimerization reaction of isatin aldol derivative 18 (Scheme a) and isatin aldol derivatives 29–31 (Scheme b) to give spirooxindole octahydropentalenes is shown. DETAILED DESCRIPTION OF THE INVENTION
[0019] Certain specific embodiments of the present invention are described below. Although embodiments of the present invention are described herein, the description is merely exemplary. Further modifications of the invention disclosed herein will occur to those skilled in the respective technical fields, and all such modifications are considered to be within the scope of the present invention as defined by the appended claims. The documents cited herein are incorporated herein by reference as supplementary references.
[0020] The following are definitions of terms used in this specification.
[0021] "Alkyl" by itself or as part of another substituent refers to a saturated hydrocarbon group. "Alkyl" has the number of carbon atoms as specified (i.e., C 1~8 means 1 to 8 carbon atoms) can be a linear or branched group. "Cycloalkyl" is an alkyl group that is cyclic. Examples of alkyl groups include methyl, ethyl, n-propyl, isopropyl, n-butyl, t-butyl, isobutyl, and sec-butyl. Examples of cycloalkyl groups include cyclohexyl, cyclopentyl, (cyclohexyl)methyl, cyclopropylmethyl, bicyclo[2.2.1]heptane, bicyclo[2.2.2]octane, and the like. An alkyl group can be substituted or unsubstituted unless otherwise specified. Examples of substituted alkyls include haloalkyl, perhaloalkyl, thioalkyl, aminoalkyl, and the like. In some embodiments, alkyls can be interrupted by or linked to oxygen, sulfur, or nitrogen.
[0022] "Aryl" refers to an aromatic hydrocarbon group having a single ring (monocyclic) or multiple rings (such as bicyclic) which may be fused together or linked by covalent bonds. Aryl groups having 6 to 10 carbon atoms are preferred, where the number of carbon atoms is, for example, C 6~10 Examples of aryl groups include phenyl and naphthalen-1-yl, naphthalen-2-yl, biphenyl, etc. Aryl groups can be substituted or unsubstituted unless otherwise specified.
[0023] "Heterocycloalkyl" refers to a saturated or unsaturated non-aromatic ring containing at least one heteroatom (typically 1 to 5 heteroatoms) selected from nitrogen, oxygen, sulfur, or silicon. Heterocyclyl rings can be monocyclic or bicyclic. Preferably, these groups contain 0 to 5 nitrogen atoms, 0 to 2 sulfur atoms, and 0 to 2 oxygen atoms. More preferably, these groups contain 0 to 3 nitrogen atoms, 0 to 1 sulfur atom, and 0 to 1 oxygen atom. Examples of heterocycloalkyl groups include pyrrolidine, piperidine, imidazolidine, pyrazolidine, butyrolactam, valerolactam, imidazolidinone, hydantoin, dioxolane, phthalimide, piperidine, 1,4-dioxane, morpholine, thiomorpholine, thiomorpholine-S-oxide, thiomorpholine-S,S-dioxide, piperazine, pyran, pyridone, 3-pyrroline, thiopyran, pyrone, tetrahydrofuran, tetrahydrothiophene, quinuclidine, and the like.
[0024] "Heteroaryl" refers to an aromatic group containing at least one heteroatom, where the heteroaryl group can be monocyclic or bicyclic. Examples include pyridyl, pyridazinyl, pyrazinyl, pyrimidinyl, triazinyl, quinolinyl, quinoxalinyl, quinazolinyl, cinnolinyl, phthalazinyl, benzotriazinyl, purinyl, benzimidazolyl, benzopyrazolyl, benzotriazolyl, benzisoxazolyl, isobenzofuryl, isoindolyl, indolizinyl, thienopyridinyl, thienopyrimidinyl, pyrazolopyrimidinyl, imidazopyridine, benzothiazolyl, benzofuranyl, benzothienyl, indolyl, quinolyl, isoquinolyl, isothiazolyl, pyrazolyl, indazolyl, pteridinyl, imidazolyl, triazolyl, tetrazolyl, oxazolyl, isoxazolyl, oxadiazolyl, thiadiazolyl, pyrrolyl, thiazolyl, furyl, or thienyl.
[0025] One aspect of the invention is a method for buffering a non-aqueous solution comprising adding a buffer molecule to the non-aqueous solution, wherein the non-aqueous solution comprises an organic solvent, the buffer molecule is a 1,3-cyclohexanedione derivative or a 1,3-cyclopentanedione derivative, and the buffer molecule is optionally conjugated to a solid support.
[0026] In certain embodiments, the 1,3-cyclohexanedione derivative has Formula I: [ka] It has a structure represented by:
[0027] In such embodiments, in Formula I, R 1 ~R 5 may each be hydrogen or a substituent, and R 1 ~R 5 Any two groups may form a ring. The substituent may be conjugated to a solid support, such as a resin bead.
[0028] In certain embodiments, the 1,3-cyclopentanedione derivative has Formula II: [ka] It has a structure represented by:
[0029] In such embodiments, in Formula II, R 1 ~R 3 may each be hydrogen or a substituent, and R 1 ~R 3 Any two groups may form a ring. The substituent may be conjugated to a solid support, such as a resin bead.
[0030] In certain embodiments, the substituents are alkyl, cycloalkyl, aryl, heterocycloalkyl, heteroaryl, or acyl, which may be substituted with one or more substituents selected from the group consisting of alkyl, alkenyl, alkynyl, alkoxy, nitro, cyano, halogen, hydroxy, acyl, carboxyl, carboxamide, carboxylic acid ester, haloalkyl, haloalkoxy, aryl, heterocycloalkyl, and heteroaryl. In some embodiments, the substituents may be unsubstituted.
[0031] In particular, the substituent R in formula I 1 ~R 5 and the substituent R in formula II 1 ~R 3 are respectively, C 1~18 Alkyl, C 3~18 Cycloalkyl, aryl, C 3~18 Heterocycloalkyl or heteroaryl, which may be C 1~18 Alkyl, C 2~18 Alkenyl, C 2~18 Alkynyl, C 1~18 Alkoxy, nitro, cyano, halogen, hydroxy, carboxy, carboxamide, carboxylic acid ester, haloalkyl, halo-C 1~18 -alkoxy, aryl, C 3~18 -heterocycloalkyl, and / or heteroaryl, optionally substituted with one or more substituents selected from the group consisting of:
[0032] In some embodiments, alkyl is C 1~5 Alkyl, C 1~8 Alkyl, or C 1~10 alkyl, and cycloalkyl is C 3~6 Cycloalkyl, C 3~8 Cycloalkyl, or C 3~10 cycloalkyl, and heterocycloalkyl is C 3~8 Heterocycloalkyl, C 3~10 Heterocycloalkyl, or C 3~12Heterocycloalkyl and aryl can be C 6~8 Aryl, C 6~10 Aryl, or C 6~12 aryl, and heteroaryl is C 5~8 Heteroaryl, C 5~10 Heteroaryl, or C 5~12 It may be heteroaryl.
[0033] Preferably, the buffer molecule is [ka]
[0034] In certain embodiments, the buffer molecule is conjugated to a solid support.
[0035] When a solid support is linked to a 1,3-cyclohexanedione derivative having a structure represented by formula I, the position at which the solid support is linked is R 1 ~R 5 For example, the solid support may be any one of R 1 is concatenated to:
[0036] [ka]
[0037] When a solid support is linked to a 1,3-cyclopentanedione derivative having a structure represented by formula II, the position at which the solid support is linked is R 1 ~R 3 It can be one of the following:
[0038] The link between the solid support and the buffer molecule can be a covalent bond. The solid support can be made of any suitable material known in the art. For example, the solid support can be made of a resin such as a silicone resin, a polystyrene resin, or an acrylic resin.
[0039] The solid support may be linked to the buffer molecule directly or via a linker. The linker is represented by R in Formula I. 1 ~R 5 and R in the above formula II 1 ~R 3 In certain embodiments, the substituent R in formula I may be connected to any one of 1 ~R 5 In certain embodiments, at least one of the substituents R in Formula II can be a linker. 1 ~R 3 At least one of the groups may be a linker. The linker may be any suitable linker known in the art. The linker may be as simple as a covalent bond (e.g., a carbon-carbon bond, a disulfide bond, a carbon-heteroatom bond, an ether, an amide, an ester, a bond formed by click chemistry (e.g., a C-C triple bond and an azide), etc.), or the linker may be more complex, such as a polymer linker (e.g., polyethylene, polyethylene glycol, polyamide, polyester, etc.) or a ring formed by click chemistry (e.g., a C-C triple bond and an azide), a Diels-Alder reaction, a hetero Diels-Alder reaction, and a cascade reaction (e.g., aldol-aldol reaction, aldol-Michael reaction, aldol-Henry reaction, and other reactions). For example, an alkenyl resin, an amine-functionalized resin, a benzhydrylamine (BHA) resin, a Br-functionalized resin, a chloromethyl resin, a CHO-functionalized resin, a Cl-functionalized resin, an F-functionalized resin, a COH-functionalized resin, etc. may be linked to the buffer molecule. In one embodiment, the 4-benzyloxybenzaldehyde resin may be linked to a buffer molecule.
[0040] The solid support may be a particle, a container, or a device. In one embodiment, the buffer molecule may be conjugated to the inner wall of the container to which the non-aqueous solution is added. In another embodiment, the buffer molecule may be conjugated to a particle, and the particle may be suspended in the non-aqueous solution. Alternatively, the buffer molecule may be conjugated to the surface of a device used in the non-aqueous solution.
[0041] The solid support can be made in a conventional manner using conventional compounds. The solid support can also be available from commercial sources. The solid support can be conjugated to a buffer molecule by methods known in the art.
[0042] The organic solvent can be appropriately selected by a person skilled in the art from any organic solvent known in the art according to requirements and purposes. Suitably, the organic solvent is neither acidic nor basic. In certain embodiments, the organic solvent is selected from the group consisting of aliphatic compounds, aromatic compounds, alcohols, esters, ethers, ketones, nitriles, and halogenated hydrocarbons. For example, the organic solvent is selected from the group consisting of hexane, octane, cyclohexane, pentane, benzene, toluene, xylene, methanol, ethanol, propanol, butanol, 1,4-dioxane, tetrahydrofuran, butyl methyl ether, diethyl ether, dibutyl ether, acetone, 2-butanone, 3-pentanone, ethyl acetate, acetonitrile, dichloromethane, chloroform, mono-, di-, tri-, and poly-halogenated benzenes, trifluoromethylbenzene, 1,1,2,2-tetrachloroethane, CDCl3, toluene-d8, CD3CN, acetone-d6, THF-d8, CD3OD, furan, thiophene, and benzofuran. The non-aqueous solution may contain two or more organic solvents.
[0043] The non-aqueous solution may contain trace amounts of water as an impurity. In certain embodiments, the non-aqueous solution is water-free or substantially water-free. The non-aqueous solution may contain water molecules as a co-product or intermediate of a chemical reaction.
[0044] In certain embodiments, the method further includes storing the chemical compound in a non-aqueous solution containing a buffer molecule. In such embodiments, an acid or base may cause isomerization, racemization, or decomposition of the chemical compound, and the buffer molecule may inhibit the isomerization, racemization, or decomposition. In this embodiment, even if the non-aqueous solution contains an acid or base, preferably 1% or less, more preferably 0.5% or less, and most preferably 0% of the stored compound is isomerized, racemized, or decomposed by the acid or base. In a non-aqueous solution containing a buffer molecule, the rate of decomposition, racemization, or isomerization of the chemical compound that occurs in the presence of an acid or base and in the absence of a buffer molecule may be reduced to at most 30%, at most 20%, at most 10%, at most 5%, at most 1%, at most 0.5%, and preferably 0%.
[0045] Buffer molecules can be used to store chemical compounds for a certain period of time without being isomerized, racemized, or decomposed by acids or bases. Therefore, a method for storing chemical compounds in a non-aqueous solution containing buffer molecules can be implemented. The chemical compounds to be stored can be added to the non-aqueous solution containing buffer molecules.
[0046] To inhibit the decomposition, isomerization, and racemization of chemical compounds with buffer molecules, it is not necessary to consider whether the decomposition, isomerization, and / or racemization is caused by a base or an acid, or what type of acid or base causes the decomposition, isomerization, and / or racemization.
[0047] The chemical compound to be stored can be any compound known in the art, for example, the chemical compound to be stored is one of alcohols, aldols, aldehydes, ketones, esters, amides, N-protected aminoaldehydes, Mannich reaction products, N-protected amino acids, N-protected amino acid esters, N-protected peptides, N-protected amino acid derivatives, β-hydroxy α-amino acid derivatives, and functionalized N-protected amino acid derivatives.
[0048] In one embodiment, the compound being stored is an organic solvent. In this embodiment, the buffer molecule can inhibit isomerization, racemization, or decomposition of the solvent.
[0049] The chemical compound can be stored in the non-aqueous solution for any length of time. For example, the chemical compound can be stored for at least 10 minutes, 1 hour, 6 hours, 12 hours, 72 hours, 1 month, or 1 year. The compound can be stored for several days, several months, several years, or several decades. The temperature at which the compound is stored can be appropriately selected by those skilled in the art depending on the requirements and purpose. For example, the temperature can be minus 100 degrees Celsius (-100°C) to 70 degrees Celsius (70°C), such as room temperature or higher, for example, 60°C.
[0050] The stored chemical compound can be included in any suitable amount in a non-aqueous solution or as a suspension. For example, the amount of stored chemical compound can be 1.0×10 -6 M to 10M, e.g., 1.0 × 10 -6 M, 1.0 × 10 -5 M, 1.0 × 10 -4 M, 1.0 × 10 -3 M, 1.0 × 10 -2 M, 1.0 × 10 -1 The concentration can be 0.5M, 0.5M, 1.0M, 2.0M, and 10M.
[0051] The buffer molecules can function to suppress the decomposition, isomerization, or racemization of stored chemical compounds in various acids and bases. The acid can be any organic or inorganic acid. The acid can cause the decomposition, isomerization, or racemization of certain compounds in organic solvents. For example, the organic acid can be a carboxylic acid or sulfonic acid, and the inorganic acid can be hydrochloric acid, nitric acid, phosphoric acid, sulfuric acid, or boric acid. In particular, the acid can be trifluoromethanesulfonic acid, CH3COOH, phosphoric acid, CH3SO3H, p-toluenesulfonic acid, or sulfuric acid. The base can be any organic or inorganic base. The base can cause the isomerization, racemization, or decomposition of certain compounds in organic solvents. For example, the base can be an alkoxide, an amine, an amidine, or a nitrogen-containing heterocyclic compound. In particular, the base can be 1,8-diazabicyclo[5.4.0]undec-7-ene, Et3N, i-Pr2NEt, quinidine, NaOMe, KO t Bu, or 1,1,3,3-tetramethylguanidine.
[0052] In certain embodiments, the method further includes adding at least one reactant to the non-aqueous solution and carrying out a chemical reaction (or chemical transformation) with the reactant. For example, two or more reactants can be added to the non-aqueous solution. In such embodiments, the chemical reaction can produce a product that is different from the product of the same reaction carried out without the buffer molecule.
[0053] The chemical reaction carried out in this method can be appropriately selected by those skilled in the art from any chemical reaction carried out in an organic solvent. In some embodiments, the chemical reaction is carried out in the presence of an acid or a base. For example, the reaction is an acid-catalyzed reaction or a base-catalyzed reaction.
[0054] When the above chemical reactions are carried out, the non-aqueous solution may contain an acid or a base. The acid may be any organic or inorganic acid. For example, the organic acid may be a carboxylic acid or a sulfonic acid, and the inorganic acid may be hydrochloric acid, nitric acid, phosphoric acid, sulfuric acid, or boric acid. In particular, the acid may be trifluoromethanesulfonic acid, CH3COOH, phosphoric acid, CH3SO3H, p-toluenesulfonic acid, or sulfuric acid. The base may be any organic or inorganic base. For example, the base may be an alkoxide, an amine, an amidine, or a nitrogen-containing heterocyclic compound. In particular, the base may be 1,8-diazabicyclo[5.4.0]undec-7-ene, Et3N, i-Pr2NEt, quinidine, NaOMe, KO t Bu, or 1,1,3,3-tetramethylguanidine.
[0055] As shown in the examples, the simple addition of buffer molecules to a reaction mixture can completely alter the course of a reaction. Preferably, the buffer molecules do not react with the reactant(s) to form a reaction product(s) derived from the buffer molecule and the reactant(s). In other words, the buffer molecules do not form part of the reaction product. For example, the chemical reaction can be a protection reaction, a deprotection reaction, a bond-forming reaction (e.g., aldol reaction, Michael reaction, and Mannich reaction), an addition reaction, an elimination reaction, a substitution reaction, an organic redox reaction, or a rearrangement reaction. In the chemical composition, the acid or base can be included in any suitable amount.
[0056] The non-aqueous solution can contain buffer molecules in any suitable amount. For example, when the non-aqueous solution contains a chemical compound or reactant to be stored, the amount of buffer molecules can be at least 0.01 molar equivalents, 0.05 molar equivalents, 0.1 molar equivalents, 0.2 molar equivalents, 0.3 molar equivalents, 0.4 molar equivalents, 0.5 molar equivalents, 0.8 molar equivalents, 1.0 molar equivalents, 2.0 molar equivalents, or 3.0 molar equivalents relative to the chemical compound or reactant. The amount of buffer molecules can be, for example, 0.01 molar equivalents to 4.0 molar equivalents, 0.1 molar equivalents to 3.0 molar equivalents, or 0.5 molar equivalents to 2.0 molar equivalents. The buffer molecules can be added to the non-aqueous solution in a conventional manner using conventional equipment at room temperature and pressure. When the reactants are to be subjected to a chemical reaction, an acid or base can be included in any suitable amount. For example, the amount of acid or base can be from 0.01 molar equivalent to 5.0 molar equivalents relative to the reactant, e.g., 0.05 molar equivalent, 0.1 molar equivalent, 0.2 molar equivalent, 0.3 molar equivalent, 0.4 molar equivalent, 0.5 molar equivalent, 0.8 molar equivalent, or 1.0 molar equivalent relative to the reactant.
[0057] According to another aspect of the present invention, the non-aqueous solution comprises an organic solvent and a buffer molecule, which is a 1,3-cyclohexanedione derivative or a 1,3-cyclopentanedione derivative and may be conjugated to a solid support. The organic solvent, the buffer molecule, and the solid support may be selected from those described above. This solution can be used to store chemical compounds therein or to control chemical transformations therein, as described above.
[0058] According to another aspect of the present invention, an article for buffering a non-aqueous solution includes a solid support and a buffer molecule conjugated to the solid support, the buffer molecule being a 1,3-cyclohexanedione derivative or a 1,3-cyclopentanedione derivative. The buffer molecule and the solid support can be selected from those described above. The article can be used to store chemical compounds in the non-aqueous solution or to control chemical transformations in the non-aqueous solution, as described above.
[0059] Another aspect of the present invention is a 1,3-cyclohexanedione or 1,3-cyclopentanedione derivative that buffers non-aqueous solutions. The 1,3-cyclohexanedione or 1,3-cyclopentanedione derivative can be selected from those described above. [Example]
[0060] The following examples are intended to illustrate the invention and are not intended to limit the scope of the appended claims.
[0061] Materials and Methods for Examples 1 to 4 Synthesis of substituted cyclohexane-1,3-diones and related compounds 1 Synthesis of compound 1c Compound 1c was synthesized as previously reported in X. Wu, Z. Chen, Y.-B. Bai, and V. M. Dong, J. Am. Chem. Soc. 2016, 138, 12013.
[0062] Synthesis of compound 1d Compound 1d was synthesized as previously reported in C. Kong, N. Jana, C. Jones, T.G. Driver, J. Am. Chem. Soc. 2016, 138, 13271.
[0063] Synthesis of compound 1f Compound 1f was synthesized by a modification of the method previously reported in X. Wu, Z. Chen, Y.-B. Bai, and V. M. Dong, J. Am. Chem. Soc. 2016, vol. 138, pp. 12013. To a solution of cyclohexane-1,3-dione (200 mg, 1.78 mmol) and NaOH (71.3 mg, 13 mmol) in HO (20 mL) was added 2-iodopropane (267 μL, 2.67 mmol) at room temperature (25 °C), and the mixture was heated at 100 °C for 5 h. After cooling to room temperature, the resulting solid was collected by filtration. The solid was washed with H.sub.2O and hexane, dissolved in EtOAc-hexane, and purified by flash column chromatography (hexane / EtOAc=3:1) to give compound 1f (189.8 mg, 69%) as a colorless solid.
[0064] Synthesis of compound 1j Compound 1j was synthesized by a modification of the method previously reported in X. Wu, Z. Chen, Y.-B. Bai, and V. M. Dong, J. Am. Chem. Soc. 2016, Vol. 138, p. 12013. To a solution of cyclohexane-1,3-dione (200 mg, 1.78 mmol) and NaOH (71.3 mg, 13 mmol) in HO (20 mL) was added iodocyclohexane (345 μL, 2.67 mmol) at room temperature (25 °C), and the mixture was heated at 100 °C for 5 h. After cooling to room temperature, the resulting solid was collected by filtration. The solid was washed with HO and hexane and purified by flash column chromatography (hexane / EtOAc = 2:1) to give compound 1j (183.6 mg, 53%) as a colorless solid.
[0065] Synthesis of compound 1k To a solution of cyclohexane-1,3-dione (200 mg, 1.78 mmol) and triphenylchloromethane (497.6 mg, 1.78 mmol) in CHCl (10 mL) was added EtN (373 μL, 2.67 mmol) at room temperature (25 °C), and the solution was stirred at the same temperature for 12 h. The mixture was washed with HO, dried over NaSO, concentrated, and purified by flash column chromatography (hexane / EtOAc = 5:1) to give compound 1k (391.6 mg, 62%) as a colorless solid.
[0066] Synthesis of resin-conjugated 1b [ka]
[0067] The method reported for the synthesis of 2-benzyl-1,3-cyclohexanedione from benzaldehyde and 1,3-cyclohexanedione was used (Y. Wu, I. Arenas, L. M. Broomfield, E. Martin, A. Shafir, Chem. Eur. J. 2015, 21, 18779). A mixture of 4-benzyloxybenzaldehyde resin (Chem-Impex International, Wang resin, polystyrene resin cross-linked with divinylbenzene, 100-200 mesh, 2.5 mmol / g-3.0 mmol / g, 1.00 g), 1,3-cyclohexanedione (841 mg, 7.50 mmol), diethyl 1,4-dihydro-2,6-dimethyl-3,5-pyridinedicarboxylate (Hantsch ester, 1.90 g, 7.50 mmol), and L-proline (57.6 mg, 0.50 mmol) in CHCl (40 mL) was stirred at 70 °C for 3 days. After cooling to room temperature, the mixture was filtered, and the beads were washed sequentially with CHCl, acetone, HO, acetone, and CHCl (the beads were stirred in each wash solvent for at least 5 min and then filtered). This washing cycle was repeated eight times. For each cycle, the filtrate from the CH2Cl2 phase was collected and concentrated. 1 The beads were analyzed by H NMR. NMR analysis confirmed that the filtrate was free of compound after the seventh and eighth washing cycles. The beads were dried under reduced pressure for 3 days to yield resin-conjugated compound 1b. For the use of this resin-conjugated compound 1b, the loading of 1,3-cyclohexanedione on the beads was estimated to be 2.0 mmol / g, based on the expected complete conversion (2.5 mmol / 1.24 g).
[0068] Evaluation of the Effect of Compound 1a on the Isomerization of Compound 2 to Compound 3 (Tables 1 to 9 below) Entry 1 in Table 1: Compound 2 (12.7 mg, 0.0286 mmol) was dissolved in CDCl3 (1.0 mL) in an NMR tube at room temperature (25 °C), and the solution was capped and kept at the same temperature for 5 minutes. The solution was gently swirled and 1 Analysis by 1 H NMR was performed to determine the ratio of compound 2 to compound 3.
[0069] The procedure for the other items in Table 1 and the items in Tables 2 to 9 was similar to the procedure for item 1 in Table 1, except for the modifications indicated in the tables.
[0070] Evaluation of the effect of compounds on the isomerization of compound 2 to compound 3 (Figures 1 and 2) Testing Procedure for DBU-Catalyzed Isomerization in Figures 1 and 2 To a mixture of compound 2 (12.7 mg, 0.0286 mmol, 1.0 equiv.) and the compound to be tested (0.0286 mmol, 1.0 equiv.) in CDCl (1.0 mL) in an NMR tube, DBU (0.67 M in CDCl, 0.43 μL, 2.9 × 10 -4 (mmol, 0.01 equiv.) was added at room temperature (25°C), and the mixture was capped and kept at the same temperature for 5 minutes. The mixture was gently shaken and 1 The ratio of compound 2 to compound 3 was determined by H NMR analysis. When compound 1a was used, the reaction mixture was a homogeneous, clear solution. Compound 1b was less soluble in CDCl3 than compound 1a, and the reaction mixture with compound 1b showed an insoluble precipitate (i.e., compound 1b was partially soluble and partially precipitated in the reaction mixture). Depending on the compound tested, the reaction mixture was either a clear solution or showed an insoluble precipitate. Regardless of the solubility of the compound tested in the reaction mixture, NMR analysis was performed as described.
[0071] Testing procedures for TfOH-catalyzed isomerization in Figures 1 and 2 To a mixture of compound 2 (12.7 mg, 0.0286 mmol, 1.0 equiv.) and the compound to be tested (0.0286 mmol, 1.0 equiv.) in CDCl3 (1.0 mL) in an NMR tube, TfOH (1.1 M in CD3CN, 2.53 μL, 0.00286 mmol, 0.1 equiv.) was added at room temperature (25 °C), and the mixture was capped and kept at 60 °C in an oil bath for 1.0 h. After cooling to room temperature, the solution was gently swirled and 1 Analysis by 1 H NMR determined the ratio of compound 2 to compound 3. Depending on the compound tested, the reaction mixture was either a clear solution or showed an insoluble precipitate.
[0072] Evaluation of the effect of compound 1b and related compounds on the isomerization and decomposition of compound 4 (Scheme a in Figure 3). (a) Procedure for Scheme a(i) in Figure 3 Scheme a(i) in Figure 3 in the absence of buffer molecules To a solution of compound (S)-4 (100% ee, 41.1 mg, 0.20 mmol, 1.0 equiv.) in CD3CN (3.5 mL) in a glass vial, DBU (3.0 μL, 0.020 mmol, 0.1 equiv.) was added at room temperature (25 °C), and the solution was capped and stirred at the same temperature. At the indicated time points, a portion of the solution was transferred to an NMR tube. 1 The NMR analysis showed the formation of compound 5, and the ratio of compound 4 to compound 5 was 1 The enantiopurity was determined by H NMR analysis. Immediately after the NMR analysis, a portion of the reaction mixture analyzed by NMR was directly purified by preparative TLC (hexane / EtOAc = 1:1) to recover compound 4, which was analyzed by HPLC to determine the enantiopurity. HPLC (Daicel Chiralpak IC-3, hexane / 2-PrOH = 70:30, 0.5 mL / min, λ = 254 nm): R (major enantiomer, (S)-4) = 38.3 min, t R (minor enantiomer, (R)-4) = 33.6 min.
[0073] Scheme a(i) of Figure 3 in the presence of compound 1b To a solution of compound (S)-4 (100% ee, 41.1 mg, 0.20 mmol, 1.0 equiv.) and compound 1b (25.3 mg, 0.20 mmol, 1.0 equiv.) in CD3CN (3.5 mL) in a glass vial, DBU (3.0 μL, 0.020 mmol, 0.1 equiv.) was added at room temperature (25 °C), and the resulting solution was capped and stirred at the same temperature. At the indicated time points, a portion of the solution was transferred to an NMR tube. 1 The reaction mixture was analyzed by H NMR. NMR analysis showed that compound 4 was unchanged and that compound 5 was not formed. Immediately after NMR analysis, the NMR-analyzed portion of the reaction mixture was directly purified by preparative TLC (hexane / EtOAc = 1:1) to recover compound 4, which was analyzed by HPLC to determine the enantiomeric purity. The HPLC conditions used were the same as those described in Scheme a(i) of Figure 3 in the absence of buffer molecules.
[0074] Scheme a(i) of Figure 3 in the presence of compound 1b conjugated to a resin To a solution of compound (S)-4 (100% ee, 41.1 mg, 0.20 mmol, 1.0 equiv.) and resin-conjugated 1b (2.0 mmol / g, 99.2 mg, 0.20 mmol, 1.0 equiv.) in CD3CN (3.5 mL) in a glass vial, DBU (3.0 μL, 0.020 mmol, 0.1 equiv.) was added at room temperature (25 °C), and the resulting solution was capped and stirred at the same temperature. At the indicated time points, a portion of the solution was transferred to an NMR tube. 1 The reaction mixture was analyzed by H NMR. NMR analysis showed that compound 4 was unchanged and that compound 5 was not formed. Immediately after NMR analysis, the NMR-analyzed portion of the reaction mixture was directly purified by preparative TLC (hexane / EtOAc = 1:1) to recover compound 4, which was analyzed by HPLC to determine the enantiomeric purity. The HPLC conditions used were the same as those described in Scheme a(i) of Figure 3 in the absence of buffer molecules.
[0075] The procedures for the tests in Tables 10-13 were similar to those in Figure 3, except for the modifications indicated in the tables.
[0076] (b) Procedure for the test in scheme a(ii) of Figure 3 Scheme a(ii) in Figure 3 in the absence of buffer molecules To a solution of compound (S)-4 (100% ee, 41.1 mg, 0.20 mmol, 1.0 equiv.) in CDCN (3.5 mL) in a glass vial, TfOH (1.8 μL, 0.020 mmol, 0.1 equiv.) was added at room temperature (25 °C), and the solution was capped and stirred at the same temperature. At the indicated reaction time (72 h), a portion of the solution was transferred to an NMR tube. 1 The NMR analysis showed the formation of compound 6, and the ratio of compound 4 to compound 6 was 1 The enantiomeric purity was determined by H NMR analysis. Immediately after the NMR analysis, a portion of the reaction mixture analyzed by NMR was directly purified by preparative TLC (hexane / EtOAc = 1:1) to recover compound 4, which was analyzed by HPLC to determine the enantiomeric purity. The HPLC conditions used were the same as those described in the procedure for Scheme a(i) in Figure 3. Compound 6 was also isolated from the reaction mixture by flash column chromatography (hexane / EtOAc = 2:1), and the structure was confirmed.
[0077] Scheme a(ii) of Figure 3 in the presence of compound 1b To a solution of compound (S)-4 (100% ee, 41.1 mg, 0.20 mmol, 1.0 equiv.) and compound 1b (25.3 mg, 0.20 mmol, 1.0 equiv.) in CD3CN (3.5 mL) in a glass vial, TfOH (1.8 μL, 0.020 mmol, 0.1 equiv.) was added at room temperature (25 °C), and the solution was capped and stirred at the same temperature. At the indicated reaction time (72 h), a portion of the solution was transferred to an NMR tube. 1The reaction mixture was analyzed by H NMR. NMR analysis showed that compound 4 was largely unchanged and that compound 6 was formed at less than 1% of compound 4. Immediately after NMR analysis, the NMR-analyzed portion of the reaction mixture was directly purified by preparative TLC (hexane / EtOAc = 1:1) to recover compound 4, which was analyzed by HPLC to determine the enantiomeric purity. The HPLC conditions used were the same as those described in the procedure for Scheme a(i) of Figure 3.
[0078] Scheme a(ii) of Figure 3 in the presence of compound 1b conjugated to a resin To a solution of compound (S)-4 (100% ee, 41.1 mg, 0.20 mmol, 1.0 equiv.) and resin-conjugated compound 1b (2.0 mmol / g, 99.2 mg, 0.20 mmol, 1.0 equiv.) in CD3CN (3.5 mL) in a glass vial, TfOH (1.8 μL, 0.020 mmol, 0.1 equiv.) was added at room temperature (25 °C), and the solution was capped and stirred at the same temperature. At the indicated reaction time (72 h), a portion of the solution was transferred to an NMR tube. 1 The reaction mixture was analyzed by H NMR. NMR analysis showed that compound 4 was largely unchanged and that compound 6 was formed at less than 1% of compound 4. Immediately after NMR analysis, the NMR-analyzed portion of the reaction mixture was directly purified by preparative TLC (hexane / EtOAc = 1:1) to recover compound 4, which was analyzed by HPLC to determine the enantiomeric purity. The HPLC conditions used were the same as those described in the procedure for Scheme a(i) of Figure 3.
[0079] Additional results for scheme a(ii) of Figure 3 in CDCl3 To a mixture of compound (S)-4 (100% ee, 5.9 mg, 0.028 mmol, 1.0 equiv.) and compound 1b (3.6 mg, 0.028 mmol, 1.0 equiv.) in CDCl3 (0.5 mL) in a glass vial, TfOH (1.1 M in CD3CN, 2.5 μL, 2.8 × 10 -3(0.1 mmol, 0.1 equiv.) was added at room temperature (25 °C), and the resulting mixture was capped and stirred at the same temperature for 72 h. Compound 1b was partially soluble in the reaction mixture and partially precipitated. A portion of the solution was transferred to an NMR tube and analyzed. 1 The ratio of compound 4 to compound 6 was 1 The enantiomeric ratio was determined to be 4:6=98:2 by H NMR analysis, and the enantiomeric purity of compound 4 was determined to be 99.3% ee by HPLC analysis as described in the procedure for Scheme a(i) of Figure 3. In the same reaction but without the addition of compound 1b, the reaction mixture turned black after 1 hour, 1 According to 1 H NMR analysis, this involved the formation of a complex mixture.
[0080] Evaluation of the effect of compound 1b and related compounds on the isomerization and decomposition of compound 7 (Scheme b in Figure 3). (a) Procedure for Scheme b(i) in Figure 3 Scheme b(i) of Figure 3 in the absence of buffer molecules To a solution of compound (R)-7 (100% ee, 20.0 mg, 0.0823 mmol, 1.0 equiv.) in CDCl3 (0.5 mL) in a glass vial, DBU (1.3 μL, 0.0082 mmol, 0.1 equiv.) was added at room temperature (25 °C), and the solution was capped and stirred at the same temperature. At the indicated reaction time (12 h), a portion of the solution was transferred to an NMR tube. 1 The NMR analysis showed the formation of Compound 8 and Compound 9, and the ratio of Compound 7 to Compound 8 and Compound 9 was 1 Determined by 1 H NMR analysis. 1 H NMR analysis also showed that the ketone α-position of 7 was partially deuterated. Immediately after NMR analysis, a portion of the reaction mixture analyzed by NMR was directly purified by preparative TLC (hexane / EtOAc = 5:1) to recover compound 7, which was analyzed by HPLC to determine the enantiomeric purity. HPLC (Daicel Chiralpak AS-H, hexane / 2-PrOH = 90:10, 0.5 mL / min, λ = 220 nm): R(major enantiomer, (R)-7) = 28.3 min, t R (minor enantiomer, (S)-7) = 34.1 min. Compounds 8 and 9 were also isolated from the reaction by flash column chromatography (hexane / EtOAc = 5:1) and their structures were confirmed.
[0081] Scheme b(i) of Figure 3 in the presence of compound 1b To a mixture of compound (R)-7 (100% ee, 20.0 mg, 0.0823 mmol, 1.0 equiv.) and compound 1b (10.4 mg, 0.0823 mmol, 1.0 equiv.) in CDCl3 (0.5 mL) in a glass vial, DBU (1.3 μL, 0.0082 mmol, 0.1 equiv.) was added at room temperature (25 °C), and the resulting mixture was capped and stirred at the same temperature. Compound 1b was partially soluble in the reaction mixture and partially precipitated. At the indicated reaction time (12 h), a portion of the solution was transferred to an NMR tube. 1 The reaction mixture was analyzed by H NMR, which showed that compound 7 was unchanged. Immediately after the NMR analysis, a portion of the reaction mixture analyzed by NMR was directly purified by preparative TLC (hexane / EtOAc=5:1) to recover compound 7, which was analyzed by HPLC to determine the enantiomeric purity.
[0082] Scheme b(i) of Figure 3 in the presence of compound 1k To a solution of compound (R)-7 (100% ee, 20.0 mg, 0.0823 mmol, 1.0 equiv.) and compound 1k (29.2 mg, 0.0823 mmol, 1.0 equiv.) in CDCl3 (0.5 mL) in a glass vial, DBU (1.3 μL, 0.0082 mmol, 0.1 equiv.) was added at room temperature (25 °C), and the resulting mixture was capped and stirred at the same temperature. At the indicated reaction time (12 h), a portion of the solution was transferred to an NMR tube. 1The reaction mixture was analyzed by H NMR, which showed that compound 7 was unchanged. Immediately after the NMR analysis, a portion of the reaction mixture analyzed by NMR was directly purified by preparative TLC (hexane / EtOAc=5:1) to recover compound 7, which was analyzed by HPLC to determine the enantiomeric purity.
[0083] (b) Procedure for Scheme b(ii) in Figure 3 Scheme b(ii) of Figure 3 in the absence of buffer molecules To a solution of compound (R)-7 (100% ee, 20.0 mg, 0.0823 mmol, 1.0 equiv.) in CDCl3 (0.5 mL) in a glass vial, TfOH (0.73 μL, 0.0082 mmol, 0.1 equiv.) was added at room temperature (25 °C), and the solution was capped and stirred at the same temperature. At the indicated reaction time (6 h), a portion of the solution was transferred to an NMR tube. 1 The NMR analysis showed the formation of Compound 8 and Compound 9, and the ratio of Compound 7 to Compound 8 and Compound 9 was 1 The enantiomeric purity was determined by H NMR analysis. Immediately after NMR analysis, a portion of the reaction mixture analyzed by NMR was directly purified by preparative TLC (hexane / EtOAc = 5:1) to recover compound 7, which was analyzed by HPLC to determine the enantiomeric purity. Compound 9 was also isolated from the reaction mixture, and its structure was confirmed.
[0084] Scheme b(ii) of Figure 3 in the presence of compound 1b To a mixture of compound (R)-7 (100% ee, 20.0 mg, 0.0823 mmol, 1.0 equiv.) and compound 1b (10.4 mg, 0.0823 mmol, 1.0 equiv.) in CDCl3 (0.5 mL) in a glass vial, TfOH (0.73 μL, 0.0082 mmol, 0.1 equiv.) was added at room temperature (25 °C), and the resulting mixture was capped and stirred at the same temperature. Compound 1b was partially soluble in the reaction mixture and partially precipitated. At the indicated reaction time (6 h), a portion of the solution was transferred to an NMR tube. 1The reaction mixture was analyzed by H NMR. The NMR analysis showed that compound 7 was unchanged. Immediately after the NMR analysis, a portion of the reaction mixture analyzed by NMR was directly purified by preparative TLC (hexane / EtOAc=5:1) to recover compound 7, which was analyzed by HPLC to determine the enantiomeric purity of compound 7.
[0085] Scheme b(ii) of Figure 3 in the presence of compound 1k To a solution of compound (R)-7 (100% ee, 20.0 mg, 0.0823 mmol, 1.0 equiv.) and compound 1k (29.2 mg, 0.0823 mmol, 1.0 equiv.) in CDCl3 (0.5 mL) in a glass vial, TfOH (0.73 μL, 0.0082 mmol, 0.1 equiv.) was added at room temperature (25 °C), and the solution was capped and stirred at the same temperature. At the indicated reaction time (6 h), a portion of the solution was transferred to an NMR tube. 1 The reaction mixture was analyzed by H NMR. The NMR analysis showed that compound 7 was unchanged. Immediately after the NMR analysis, a portion of the reaction mixture analyzed by NMR was directly purified by preparative TLC (hexane / EtOAc=5:1) to recover compound 7, which was analyzed by HPLC to determine the enantiomeric purity of compound 7.
[0086] Evaluation of the effect of compound 1b on the isomerization of compound 10 (Scheme c in Figure 3). (a) Procedure for Scheme c in Figure 3 Scheme c in Figure 3 in the absence of buffer molecules To a solution of compound (±)-10 / 11 (10:11 = 86:14, 23.9 mg, 0.0815 mmol, 1.0 equiv.) in CDCl3 (1.0 mL) in a glass vial, DBU (1.2 μL, 0.0081 mmol, 0.1 equiv.) was added at room temperature (25 °C), and the solution was capped and stirred at the same temperature. At the indicated reaction time (10 h), a portion of the solution was transferred to an NMR tube. 1 The NMR analysis showed that the ratio of 10 / 11 had changed from the ratio before the addition of DBU, and the ratio of compound 10 to compound 11 was 1Determined by 1 H NMR analysis.
[0087] Scheme c of Figure 3 in the presence of compound 1b To a mixture of compound (±)-10 / 11 (10:11 = 86:14, 23.9 mg, 0.0815 mmol, 1.0 equiv.) and compound 1b (10.3 mg, 0.0815 mmol, 1.0 equiv.) in CDCl3 (1.0 mL) in a glass vial, DBU (1.2 μL, 0.0081 mmol, 0.1 equiv.) was added at room temperature (25 °C), and the resulting mixture was capped and stirred at the same temperature. Compound 1b was partially soluble in the reaction mixture and partially precipitated. At the indicated reaction time (10 h), a portion of the solution was transferred to an NMR tube. 1 The product was analyzed by H NMR, which showed that the 10 / 11 ratio was unchanged.
[0088] Evaluation of the effect of compound 1b on the isomerization and decomposition of compound 12 (Scheme d in Figure 3). (a) Procedure for scheme d in Figure 3 Scheme d(i) of Figure 3 in the absence of buffer molecules To a solution of L-threonine derivative 12 (100 mg, 0.29 mmol, 1.0 equiv.) in CDCl3 (5.0 mL) in a glass vial, DBU (4.4 μL, 0.029 mmol, 0.1 equiv.) was added at room temperature (25 °C), and the solution was capped and stirred at the same temperature for 1.0 h. A portion of the solution was transferred to an NMR tube. 1 The product was analyzed by H NMR. The NMR analysis showed the formation of compound 13, 1 The ratio of 12 / 13 was determined to be 85:15 by H NMR analysis. Immediately after NMR analysis, the solution was purified by flash chromatography (hexane / EtOAc = 3:1) to isolate compounds 12 and 13. The recovered compound 12 was 1 Analysis by 1 H NMR showed that compound 12 was greater than 95% pure. 1 H NMR indicated that the impurity (less than 5% of compound 12) was a diastereomer of compound 12 (this impurity has the same Rf HPLC analysis also showed the presence of an impurity, which was likely a diastereomer of compound 12. HPLC (Daicel Chiralpak IC-3, hexane / 2-PrOH=90:10, 0.5 mL / min, λ=254 nm): R (12)=57.6 minutes, t R (impurity, probably diastereomer of compound 12) = 53.9 min.
[0089] Scheme d(i) of Figure 3 in the presence of compound 1b To a mixture of L-threonine derivative 12 (100 mg, 0.29 mmol, 1.0 equiv.) and compound 1b (36.8 mg, 0.29 mmol, 1.0 equiv.) in CDCl3 (5.0 mL) in a glass vial, DBU (4.4 μL, 0.029 mmol, 0.1 equiv.) was added at room temperature (25 °C). The resulting mixture was capped and stirred at the same temperature for 1.0 h. Compound 1b was partially soluble in the reaction mixture and partially precipitated. A portion of the solution was transferred to an NMR tube. 1 The solution was analyzed by H NMR. The NMR analysis showed that compound 12 was unchanged. Immediately after the NMR analysis, the solution was purified by flash column chromatography (hexane / EtOAc = 3:1) to isolate compound 12. The recovered compound 12 was 1 Analysis by H NMR showed that the recovered compound 12 was pure and there was no sign of the presence of diastereomers of compound 12 or other impurities with the recovered compound 12. HPLC analysis also confirmed the purity of the recovered compound 12.
[0090] Scheme d(ii) in Figure 3 in the absence of buffer molecules To a solution of L-threonine derivative 12 (100 mg, 0.29 mmol, 1.0 equiv.) in CDCl3 (5.0 mL) in a glass vial, TfOH (2.6 μL, 0.029 mmol, 0.1 equiv.) was added at room temperature (25 °C), and the solution was capped and stirred at the same temperature for 12 h. A portion of the solution was transferred to an NMR tube. 1The NMR analysis showed the formation of benzyl alcohol, and the ratio of compound 12 / benzyl alcohol was 1 The structure was determined by H NMR analysis. Immediately after NMR analysis, the solution was purified by flash chromatography (hexane / EtOAc=3:1) to isolate compound 12 and benzyl alcohol. The structure of the isolated benzyl alcohol was 1 H NMR analysis and 13 The recovered compound 12 was confirmed by C NMR analysis. 1 Analysis by 1 H NMR confirmed that there was no evidence of the presence of diastereomers of compound 12.
[0091] Scheme d(ii) of Figure 3 in the presence of compound 1b To a mixture of L-threonine derivative 12 (100 mg, 0.29 mmol, 1.0 equiv.) and compound 1b (36.8 mg, 0.29 mmol, 1.0 equiv.) in CDCl3 (5.0 mL) in a glass vial, TfOH (2.6 μL, 0.029 mmol, 0.1 equiv.) was added at room temperature (25 °C). The resulting mixture was capped and stirred at the same temperature for 12 h. Compound 1b was partially soluble in the reaction mixture and partially precipitated. A portion of the solution was transferred to an NMR tube. 1 The resulting solution was analyzed by H NMR. NMR analysis showed that compound 12 was unchanged (no benzyl alcohol formation was detected). After NMR analysis, the solution was purified by flash column chromatography (hexane / EtOAc = 3:1) to isolate compound 12. The recovered compound 12 was 1 Analysis by 1 H NMR and HPLC confirmed the purity.
[0092] Chemical transformations: Evaluation of the effectiveness of compound 1b in protecting the hydroxy group (Figure 4) (a) Procedure for the scheme in Figure 4 Reaction of compound 14 in Figure 4 in the absence of buffer molecules To a solution of (±)-14 (74.2 mg, 0.286 mmol, 1.0 equiv.) and TMSCN (trimethylsilyl cyanide) (53.8 μL, 0.43 mmol, 1.5 equiv.) in CHCl (1.0 mL), DBU (4.3 μL, 0.029 mmol, 0.1 equiv.) was added at room temperature (25 °C), and the resulting mixture was stirred at 60 °C for 1 h. After cooling to room temperature, the reaction mixture was purified by flash column chromatography (hexane / EtOAc = 5:1) to give compound 15 (27.6 mg, 29%), compound 16 (35.7 mg, 29%), as a diastereomeric mixture, estimated by TLC analysis at dr = approximately 10:1), and compound 17 (34.9 mg, 34%). The major diastereomer of compound 16 was further purified by flash column chromatography (hexane / EtOAc = 5:1).
[0093] Reaction of compound 14 in Figure 4 in the presence of compound 1b To a solution of (R)-14 (74.3 mg, 0.286 mmol, 1.0 equiv.), TMSCN (53.8 μL, 0.43 mmol, 1.5 equiv.), and compound 1b (36.2 mg, 0.286 mmol, 1.0 equiv.) in CHCl (1.0 mL) was added DBU (4.3 μL, 0.029 mmol, 0.1 equiv.) at room temperature (25° C.), and the resulting mixture was stirred at 60° C. for 1.5 h. After cooling to room temperature, the reaction mixture was purified by flash column chromatography (hexane / EtOAc=5:1) to give compound 15 (91.2 mg, 96%, 100% ee).
[0094] Chemical transformations: Evaluation of the effectiveness of compound 1b in the addition reactions of furan and thiophene (Figure 5). (a) Procedure for the scheme in Figure 5 Reaction of compound 18 with furan in CDCl3 in the absence of buffer molecules (Scheme a in Figure 5). To a solution of compound 18 (100 mg, 0.286 mmol, 1.0 equiv.) and furan (62.5 μL, 0.860 mmol, 3.0 equiv.) in CDCl (1.0 mL) was added TfOH (2.5 μL, 0.029 mmol, 0.1 equiv.) at room temperature (25 °C), and the mixture was stirred at 60 °C for 1.0 h. After cooling to room temperature, the reaction mixture was 1 Analysis by 1 H NMR showed the formation of compound 19 (100% NMR yield).
[0095] Reaction of compound 18 with furan under neat conditions in scheme a of Figure 5 in the absence of buffer molecules. To a solution of compound 18 (100 mg, 0.286 mmol, 1.0 equiv) in furan (1.0 mL, 13.7 mmol, 48 equiv) was added TfOH (2.5 μL, 0.029 mmol, 0.1 equiv) at room temperature (25 °C), and the mixture was stirred at 60 °C for 1.0 h. TLC analysis of the reaction mixture showed the formation of seven more products different from compound 20 or compound 21.
[0096] Reaction of 18 with furan in the presence of compound 1b in scheme a of Figure 5 To a solution of compound 18 (100 mg, 0.286 mmol, 1.0 equiv.) and compound 1b (36.2 mg, 0.286 mmol, 1.0 equiv.) in furan (1.0 mL, 13.7 mmol, 48 equiv.), TfOH (2.5 μL, 0.029 mmol, 0.1 equiv.) was added at room temperature (25° C.), and the mixture was stirred at 60° C. for 1.0 h. After cooling to room temperature, 1 The ratio of 20 / 21 was determined by H NMR analysis, and the reaction mixture was purified by flash column chromatography (hexane / EtOAc=5:1) to give compound 20 and compound 21 (total 112 mg, 98%, 20:21=35:65). Compound 20 and compound 21 were further purified by flash column chromatography (hexane / EtOAc=5:1) to isolate them from each other.
[0097] Reaction of compound 18 with furan without TfOH in the presence of compound 1b (Scheme a in Figure 5). A solution of compound 18 (100 mg, 0.286 mmol, 1.0 equiv.) and compound 1b (36.2 mg, 0.286 mmol, 1.0 equiv.) in furan (1.0 mL, 13.7 mmol, 48 equiv.) was stirred for 24 h at 60° C. TLC analysis of the reaction mixture showed that the starting material 18 was unchanged (i.e., no reaction).
[0098] Reaction of compound 22 with furan in Scheme b of Figure 5 in the presence of compound 1b To a solution of compound 22 (109.6 mg, 0.286 mmol, 1.0 equiv.) and compound 1b (36.2 mg, 0.286 mmol, 1.0 equiv.) in furan (1.0 mL, 13.7 mmol, 48 equiv.), TfOH (2.5 μL, 0.029 mmol, 0.1 equiv.) was added at room temperature (25° C.), and the mixture was stirred at 60° C. for 1.0 h. After cooling to room temperature, 1 The ratio of 23 / 24 was determined by H NMR analysis, and the reaction mixture was purified by flash column chromatography (hexane / EtOAc=5:1) to give compound 23 and compound 24 (total 118.9 mg, 96%, 23:24=55:45).
[0099] Reaction of compound 14 with furan in the presence of compound 1b in scheme c of Figure 5 To a solution of compound 14 (74.2 mg, 0.286 mmol, 1.0 equiv.) and compound 1b (36.2 mg, 0.286 mmol, 1.0 equiv.) in furan (1.0 mL, 13.7 mmol, 48 equiv.), TfOH (2.5 μL, 0.029 mmol, 0.1 equiv.) was added at room temperature (25° C.), and the mixture was stirred at 60° C. for 1.0 h. After cooling to room temperature, the reaction mixture was 1 Analysis by 1 H NMR and purification by flash column chromatography (hexane / EtOAc=5:1) gave compound 25 (81.4 mg, 92%).
[0100] Reaction of compound 18 with thiophene in the presence of compound 1b in scheme d of Figure 5 To a solution of compound 18 (100 mg, 0.286 mmol, 1.0 equiv.) and compound 1b (36.2 mg, 0.286 mmol, 1.0 equiv.) in thiophene (1.0 mL, 12.5 mmol, 44 equiv.), TfOH (2.5 μL, 0.029 mmol, 0.1 equiv.) was added at room temperature (25° C.), and the mixture was stirred at 60° C. for 1.0 h. After cooling to room temperature, the reaction mixture was 1 Analysis by 1 H NMR and purification by flash column chromatography (hexane / EtOAc=5:1) gave compound 26 (104.6 mg, 88%).
[0101] Reaction of compound 18 with benzofuran in the presence of compound 1b in scheme d of Figure 5 To a solution of compound 18 (100 mg, 0.286 mmol, 1.0 equiv.) and compound 1b (36.2 mg, 0.286 mmol, 1.0 equiv.) in benzofuran (1.0 mL, 9.1 mmol, 32 equiv.), TfOH (2.5 μL, 0.029 mmol, 0.1 equiv.) was added at room temperature (25° C.), and the mixture was stirred at 60° C. for 5.0 h. After cooling to room temperature, the reaction mixture was purified by flash column chromatography (hexane / EtOAc=3:1) to give compound 27 (60.1 mg, 45%).
[0102] Chemical transformations: Evaluation of the effect of compound 1b on the dimerization of isatin aldol derivatives (Figure 6) (a) Procedure for the scheme in Figure 6 Reaction of compound 18 in the presence of TfOH in scheme a of Figure 6 in the absence of buffer molecules To a solution of compound 18 (100 mg, 0.286 mmol, 1.0 equiv.) in CHCl3 (2.0 mL) was added TfOH (2.5 μL, 0.029 mmol, 0.1 equiv.) at room temperature (25 °C), and the solution was stirred at 60 °C for 1 h. After cooling to room temperature, a portion of the reaction mixture was diluted with CDCl3 and analyzed by TLC and 1 Analysis by 1 H NMR showed the formation of compound 19 (100% NMR yield).
[0103] Reaction of compound 18 in the presence of TfOH in scheme a of Figure 6 in the presence of compound 1b To a mixture of compound 18 (100 mg, 0.286 mmol, 1.0 equiv.) and compound 1b (36.2 mg, 0.286 mmol, 1.0 equiv.) in CHCl (2.0 mL) was added TfOH (2.5 μL, 0.029 mmol, 0.1 equiv.) at room temperature (25 °C), and the mixture was stirred at 60 °C for 12 h. After cooling to room temperature, the reaction mixture was purified by flash column chromatography (hexane / EtOAc = 7:1) to give compound 28 (61.7 mg, 65%, single diastereomer (>95% purity). Compound 28 was crystallized from MeOH and CHCl-hexane, respectively. The relative stereochemistry of compound 28 was determined by X-ray crystallography. The carbon-carbon double bond of compound 28 partially isomerized from E to Z during storage.
[0104] Reaction of compound 19 in the presence of TfOH, a control reaction for scheme a in Figure 6 in the presence of compound 1b. To a solution of compound 19 (25.0 mg, 0.071 mmol, 1.0 equiv.) and compound 1b (9.0 mg, 0.071 mmol, 1.0 equiv.) in CHCl (0.5 mL) was added TfOH (0.63 μL, 0.007 mmol, 0.1 equiv.) at room temperature (25° C.), and the solution was stirred at 60° C. for 12 h. After cooling to room temperature, the reaction mixture was diluted with CDCl and 1 Analysis by 1 H NMR showed that compound 19 was unchanged (i.e., unreacted).
[0105] Reaction of compound 29 in the presence of TfOH in scheme b of Figure 6 in the presence of compound 1b To a solution of compound 29 (112.1 mg, 0.286 mmol, 1.0 equiv.) and compound 1b (36.2 mg, 0.286 mmol, 1.0 equiv.) in CHCl (2.0 mL), TfOH (2.5 μL, 0.029 mmol, 0.1 equiv.) was added at room temperature (25° C.), and the solution was stirred at 60° C. for 12 h. After cooling to room temperature, the reaction mixture was purified by flash column chromatography (hexane / EtOAc=7:1) to give compound 32 (75.9 mg, 71%).
[0106] Reaction of compound 30 in the presence of TfOH in scheme b of Figure 6 in the presence of compound 1b To a solution of compound 30 (100.1 mg, 0.286 mmol, 1.0 equiv.) and compound 1b (36.2 mg, 0.286 mmol, 1.0 equiv.) in CHCl (2.0 mL), TfOH (2.5 μL, 0.029 mmol, 0.1 equiv.) was added at room temperature (25° C.), and the solution was stirred at 60° C. for 12 h. After cooling to room temperature, the reaction mixture was purified by flash column chromatography (hexane / EtOAc=7:1) to give compound 33 (63.6 mg, 67%).
[0107] Reaction of compound 31 in the presence of TfOH in scheme b of Figure 6 in the presence of compound 1b To a solution of compound 31 (95.9 mg, 0.286 mmol, 1.0 equiv.) and compound 1b (36.2 mg, 0.286 mmol, 1.0 equiv.) in CHCl (2.0 mL), TfOH (2.5 μL, 0.029 mmol, 0.1 equiv.) was added at room temperature (25° C.), and the solution was stirred at 60° C. for 12 h. After cooling to room temperature, the reaction mixture was purified by flash column chromatography (hexane / EtOAc=7:1) to give compound 34 (55.3 mg, 61%).
[0108] [Example 1] Evaluation of 1,3-cyclohexanedione's inhibition of acid-catalyzed and base-catalyzed isomerization in organic solvents. To test 1,3-cyclohexanedione for its buffering ability to neutralize both acids and bases in non-aqueous solutions, we first prepared 1,3-cyclohexanedione (1a): [ka] We investigated whether or not the isomerization of compound 2 to compound 3 catalyzed by 1,8-diazabicyclo[5.4.0]undec-7-ene (DBU) at 25 °C and the isomerization of compound 2 to compound 3 catalyzed by trifluoromethanesulfonic acid (TfOH) at 60 °C in CDCl3, as shown in Table 1.
[0109] [Table 1]
[0110] Compound 2 is a useful synthetic intermediate in the formation of spirooxindole polycycles and is readily isomerized to compound 3 under acidic or basic conditions (J.-R. Huang, M. Sohail, T. Taniguchi, K. Monde, F. Tanaka, Angew. Chem. Int. Ed. 2017, 56, 5853; Angew. Chem. 2017, 129, 5947; M. Sohail, F. Tanaka, Communications Chemistry 2017, 129, 5947). Chem. 2019, Vol. 2, p. 73, doi:10.1038 / s42004-019-0177-5. The ratio of compound 2 to compound 3 can be readily determined as described in J.-R. Huang, M. Sohail, T. Taniguchi, K. Monde, F. Tanaka, Angewandte Chem. Int. Ed. 2017, Vol. 56, p. 5853; Angewandte Chem. 2017, Vol. 129, p. 5947.
[0111] For the DBU-catalyzed isomerization of compound 2, the ratio of compound 2 to compound 3 was 24:76 5 minutes after the addition of DBU (Table 1, entry 2). In the presence of compound 1a (1.0 equivalent relative to compound 2), compound 2 remained unchanged, i.e., it was not isomerized by the addition of DBU (Table 1, entry 3). In the presence of compound 1a, the formation of compound 3 was less than 1% even after 3 days. Similarly, in the presence of compound 1a, compound 2 was not isomerized to compound 3 by the addition of TfOH (Table 1, entry 8). Compound 1a blocked both the DBU-catalyzed isomerization of compound 2 and the TfOH-catalyzed isomerization of compound 2, indicating that compound 1a neutralized both base and acid. Acetic acid inhibited only base-catalyzed isomerization (Table 1, entries 4 and 9), and benzylamine inhibited only acid-catalyzed isomerization (Table 1, entries 5 and 10). That is, acetic acid neutralized only bases, and benzylamine neutralized only acids. Thus, the effect of compound 1a on both bases and acids in organic solvents (entries 3 and 8 in Table 1) was demonstrated. These results suggest that compound 1a has a buffering function in non-aqueous solutions.
[0112] Next, the ability of compound 1a to neutralize various bases and acids in organic solvents was analyzed by evaluating the effect of compound 1a on the isomerization reaction of compound 2 to compound 3 catalyzed by various bases and acids, as shown in Table 2 .
[0113] [Table 2]
[0114] Although the extent of base-catalyzed and acid-catalyzed isomerization varies depending on the base or acid, compound 1a completely or almost completely inhibited the isomerization of compound 2 catalyzed by various bases, such as potassium tert-butoxide and 1,1,3,3-tetramethylguanidine, and by various acids, such as methanesulfonic acid and p-toluenesulfonic acid. In other words, the buffering function of compound 1a was observed against various bases and acids in non-aqueous solutions.
[0115] The extent of the inhibitory function of compound 1a on the isomerization of compound 2 to compound 3, or the buffering function of compound 1a, was also investigated in various solvents as shown in Tables 3 and 4.
[0116] [Table 3]
[0117] [Table 4]
[0118] In all solvents tested, some degree of isomerization of compound 2 to compound 3 was observed with DBU or TfOH in the absence of compound 1a. In the presence of compound 1a, no isomerization of compound 2 was detected in chloroform or toluene. In acetonitrile, acetone, 2-propanol, 1,4-dioxane, and tetrahydrofuran (THF), the isomerization of compound 2 to compound 3 was almost completely suppressed (less than 5%) in the presence of compound 1a. In dimethyl sulfoxide (DMSO), isomerization was partially inhibited by compound 1a. In polar solvents, the pKa values of bases, acids, and compound 1a may change from their pKa values in nonpolar solvents, affecting the neutralization function of compound 1a. Alternatively, hydrogen bonds may form between solvent molecules and compound 1a, reducing the interaction of compound 1a with bases or acids, thereby reducing the buffering function of compound 1a. Although the buffering function of compound 1a did not function in some polar solvents, compound 1a buffered various organic solvents including 2-propanol.
[0119] Compound 1a also inhibited the acid-catalyzed and base-catalyzed isomerization of compound 2 to compound 3 over a wide range of concentrations, as shown in Tables 5 and 6.
[0120] [Table 5]
[0121] [Table 6]
[0122] The DBU-catalyzed isomerization of compound 2 to compound 3 and the TfOH-catalyzed isomerization of compound 2 to compound 3 in CDCl3 were analyzed over various concentrations of compound 2 in the presence of 1 equivalent of compound 1a. The isomerization was suppressed to less than 1% over the range of 0.003M to 0.14M.
[0123] Furthermore, even when compound 1a was present in less than 1 equivalent relative to compound 2, the buffering function of 1a was observed, as shown in Tables 7 and 8.
[0124] [Table 7]
[0125] [Table 8]
[0126] Furthermore, the buffering function of compound 1a was retained in solution for more than 3 days even at 60° C. in the presence of TfOH, as shown in Table 9.
[0127] [Table 9]
[0128] Compound 1a has buffering properties over a wide range of conditions in non-aqueous solutions.
[0129] [Example 2] Identifying other molecules that exhibit buffering functions in non-aqueous solutions Next, we evaluated the effects of 1,3-cyclohexanedione derivatives and related molecules on the DBU-catalyzed isomerization of compound 2 to compound 3 and the TfOH-catalyzed isomerization of compound 2 to compound 3 (Figures 1 and 2). In the absence of 1,3-cyclohexanedione derivatives, the 2:3 ratio was 24:76 for the reaction with DBU and 29:71 for the reaction with TfOH (Table 1). Similar to the case of compound 1a, 1,3-cyclohexanedione derivatives 1b–1e completely inhibited the isomerization of compound 2, indicating that monosubstitution with a methyl, benzyl, or phenyl group at the 2-position of 1,3-cyclohexanedione, as well as methyl substitution at the 4- and 6-positions of 1,3-cyclohexanedione, do not affect buffering function (Figure 1). In the presence of a 1,3-cyclohexanedione derivative bearing an isopropyl group at the 2-position (compound 1f), the isomerization of compound 2 was less than 1%. 1,3-Cyclohexanedione derivatives with mono- or di-substitution at the 5-position (compounds 1g-1i) also inhibited isomerization to the same extent as compound 1f. 1,3-Cyclohexanedione with a cyclohexyl or triphenylmethyl group at the 2-position (compounds 1j and 1k, respectively), which are bulkier substituents than an isopropyl group, showed slightly lower isomerization inhibitory effects than compound 1f. 1,3-Cyclohexanedione conjugated to resin beads (resin-conjugated 1b) also inhibited isomerization.
[0130] In the DBU-catalyzed and TfOH-catalyzed isomerizations of compound 2, 1,3-cyclopentanedione (1l) and 2-acetyl-1,3-cyclohexanedione (1m) also had some buffering properties. On the other hand, 1,2-cyclohexanedione (1n), 1,4-cyclohexanedione (1o), and 2,2-dimethyl-1,3-cyclohexanedione (1p) did not inhibit the isomerization. The acyclic molecule 2,4-pentanedione (1q) also did not inhibit the isomerization.
[0131] These results indicate that compounds 1a-1e are the preferred buffer molecules of the tested compounds. Compounds 1f, 1j, and 1k may also be suitable for various applications requiring buffering functionality. Similarly, 1,3-cyclohexanedione attached to resin beads (resin-conjugated compound 1b) may also be suitable for various applications providing buffering functionality.
[0132] The same experiment was performed on compounds S1a-S1ee (Figure 2). A solution of compound 2 (2:3 >99.5:0.5, 1.0 equiv.) and compounds S1a-S1ee (1.0 equiv.) in CDCl3 was stirred at room temperature (25°C) for 5 minutes in the presence of DBU (0.01 equiv.) or at 60°C for 1 hour in the presence of TfOH (0.1 equiv.). The 2:3 ratio was stirred at room temperature. 1 The cleavage was determined by H NMR analysis and shown in the upper panel for the reaction with DBU and in the lower panel for the reaction with TfOH. S1k is a cis / trans mixture. During the isomerization reaction of compound 2, the formation of cyclohexane-1,3-dione (in the case of compounds S1o–S1w) or 2-methyl-1,3-cyclohexanedione (in the case of compounds S1x and S1y) was observed (monitored by TLC), with a 2:3 ratio depending on the dione produced. Compound S1cc is identical to 1b conjugated to the resin in Figure 1. Molecules used as buffers in aqueous solutions, such as 2-[bis(2-hydroxy)amino]ethanesulfonic acid (BES), also did not inhibit the isomerization (Figure 2).
[0133] [Example 3] Inhibitory effect of 1,3-cyclohexanedione derivatives on acid-catalyzed and base-catalyzed isomerization and decomposition. Next, compound 1 was evaluated in the isomerization and decomposition reactions of aldol products or β-hydroxyketones (Scheme a and Scheme b in Figure 3). Aldol 4 is readily racemized under basic conditions (AV Malkov, M. K. Kabeshov, M. Bella, O. Kysllka, D. A. Malyshev, K. Pluhackova, P. Kocovsky, Org. Lett. 2007, 9, 5473; N. Duangdee, W. Harnying, G. Rulli, J.-M. Neudorfl, H. Groger, A. Berkessel, J. Am. Chem. 2007). Soc. 2012, vol. 134, p. 11196), basic conditions also induced a retroaldol reaction of aldol 4 to produce compound 5 (Scheme a(i) in Figure 3). Addition of 2-methyl-1,3-cyclohexanedione (1b) to a solution of aldol 4 blocked the base-catalyzed racemization and retroaldol reaction of aldol 4 (Scheme a(i) in Figure 3). This was tested at various time points (Table 10), with various compounds (Table 11), various solvents (Table 12), and various amounts of compound 1b (Table 13).
[0134] [Table 10]
[0135] [Table 11]
[0136] [Table 12]
[0137] [Table 13]
[0138] As mentioned above, resin-supported 1b also completely inhibited racemization and decomposition. Addition of 2-pyridinecarboxylic acid, N,N-dimethylglycine, or glycine in place of compound 1a failed to suppress racemization (Table 11). Aldol 4 also racemized under acidic conditions, leading to the formation of elimination product 6 (LJ Macpherson, AE Dubin, MJ Evans, F. Marr, PG Schultz, BF Cravatt, A. Patapoutian, Nature 2007, 445, 541) (Scheme a(ii) in Figure 3). Compound 1b also suppressed the acid-catalyzed racemization and elimination reactions of aldol 4 (Scheme a(ii) in Figure 3).
[0139] Similarly, 1,3-cyclohexanedione derivatives 1b and 1k also completely inhibited the racemization of β-hydroxyketone 7 and its decomposition to give compounds 8 and 9 (Scheme b in Figure 3).
[0140] The isomerization of the Mannich reaction product or aminoaldehyde derivative 10 to 11 in the presence of DBU was also suppressed by the addition of compound 1b (Scheme c in Figure 3). The decomposition reactions of β-hydroxy-α-amino acid derivatives or protected threonine derivatives 12 by dehydration leading to the formation of compound 13 and hydrolysis leading to the generation of benzyl alcohol were also inhibited by compound 1b (Scheme d in Figure 3).
[0141] [Example 4] The effect of 1,3-cyclohexanedione derivatives in altering and controlling chemical transformations 2-Methyl-1,3-cyclohexanedione (1b) was tested for its ability to alter the product of chemical transformations (Figures 4, 5, and 6). To protect the hydroxy group of aldol 14, aldol 14 was treated with TMSCN in the presence of DBU as a base at 60 °C to afford products 15, 16, and 17. The selective formation of 15 in high yield was not achieved without compound 1b (Figure 4). When the same reaction was carried out but with the addition of compound 1b, product 15 was obtained in high yield, and the enantiomeric purity of the starting material was preserved in the product (Figure 4). In the absence of compound 1b, the cyanide anion generated from TMSCN reacted with aldol 14 to give products 16 and 17. In the presence of compound 1b, the cyanide anion was protonated, thereby preventing it from acting as a nucleophile.
[0142] Additionally, compound 18 was used instead of compound 14 described above. For the reaction of compound 18 in the absence of a buffer molecule, DBU (4.3 μL, 0.029 mmol, 0.1 equiv.) was added to a solution of (±)-18 (100 mg, 0.286 mmol, 1.0 equiv.) and TMSCN (53.8 μL, 0.43 mmol, 1.5 equiv.) in CHCl (1.0 mL) at room temperature (25 °C), and the mixture was stirred at 60 °C for 1 h. After cooling to room temperature, the mixture was purified by flash column chromatography (hexane / EtOAc = 5:1) to give compound 35 (32.5 mg, 27%), compound 36 (44.7 mg, 30%, dr = 1:1), and compound 37 (51.6 mg, 40%). For the reaction of compound 18 in the presence of compound 1b, to a mixture of (R)-18 (100 mg, 0.286 mmol, 1.0 equiv.), TMSCN (53.8 μL, 0.43 mmol, 1.5 equiv.), and compound 1b (36.2 mg, 0.286 mmol, 1.0 equiv.) in CHCl (1.0 mL) was added DBU (4.3 μL, 0.029 mmol, 0.1 equiv.) at room temperature (25° C.), and the mixture was stirred at 60° C. for 1.5 h. After cooling to room temperature, the reaction mixture was purified by flash column chromatography (hexane / EtOAc=5:1) to give compound 35 (118.2 mg, 98%, 96% ee).
[0143] [ka]
[0144] The reaction of β-hydroxyenone derivative 18 with furan was also altered by the addition of compound 1b (Scheme a, Figure 5). Under acidic conditions, compound 18 was readily converted to the oxa-Michael cyclization product 19 in the absence of compound 1b. Neat conditions for the reaction of compound 18 with furan using TfOH as a catalyst but without compound 1b resulted in the formation of a complex mixture containing seven or more new spots in TLC analysis. None of these were products 20 or 21. In contrast, the reaction under the same neat conditions but in the presence of compound 1b afforded the furan-added products 20 (keto form) and 21 (enol form) (Scheme a, Figure 5). Similarly, the TfOH-catalyzed reaction of β-hydroxyenone derivative 22 with furan in the presence of compound 1b afforded the corresponding addition products 23 and 24 (Scheme b, Figure 5), and the reaction of aldol 14 under these conditions afforded product 25 (Scheme c, Figure 5). The TfOH-catalyzed reaction of β-hydroxyenone derivative 18 with thiophene or benzofuran in the presence of compound 1b gave the corresponding addition products 26 and 27, respectively (Scheme d in Figure 5 ).
[0145] Additionally, as a control reaction, the reaction of compound 38 with furan was carried out in the presence of compound 1b. Specifically, to a solution of compound 38 (47.4 mg, 0.143 mmol, 1.0 equiv.) and compound 1b (18.1 mg, 0.143 mmol, 1.0 equiv.) in furan (0.5 mL, 6.9 mmol, 48 equiv.), TfOH (1.3 μL, 0.014 mmol, 0.1 equiv.) was added at room temperature (25 °C), and the mixture was stirred at 60 °C. The reaction mixture was analyzed by TLC and 1 Analysis by 1 H NMR showed that 38 remained unchanged (i.e., no reaction) over 12 hours, as shown below.
[0146] [ka]
[0147] Furthermore, the buffering function of compound 1b enabled the synthesis of complex spirooxindole derivatives (Figure 6). Spirooxindoles with fused ring systems are of interest for the development of pharmaceuticals and related molecules (J.-R. Huang, M. Sohail, T. Taniguchi, K. Monde, F. Tanaka, Angew. Chem. Int. Ed. 2017, 56, 5853; Angew. Chem. 2017, 129, 5947; M. Sohail, F. Tanaka, Communications Chemistry 2017, 129, 5947). Chem. 2019, Vol. 2, p. 73, doi:10.1038 / s42004-019-0177-5, D. Enders, Angewandte Chemie Int. Ed. 2017, Vol. 56, p. 8516; Angewandte Chemie 2017, Vol. 129, p. 8636, Z. Zhou, Z.-X. Wang, Y.-C. Zhou, W. Xiao, Q. Ouyang, W. Du, Y.-C. Chen, Nature Chemistry. Chem. 2017, Vol. 9, p. 590; K. Jiang, Z.-J. Jia, X. Yin, L. Wu, Y.-C. Chen, Org. Lett. 2010, Vol. 12, p. 2766; L.-L. Zhang, J.-W. Zhang, S.-H. Xiang, Z. Guo, B. Tan, Org. Lett. 2018, Vol. 20, p. 6022).However, the concise construction of functionalized fused ring systems remains a challenge (BM Bocknack, L.-C. Wang, MJ Krische, Proc. Natl. Acad. Sci. USA, 2004, vol. 101, p. 5421). Under acidic conditions containing TfOH, compound 18 was converted to the oxacyclization product 19 in the absence of compound 1b (Scheme a, Figure 6). The same reaction, but with the addition of compound 1b, led to the dimerization of compound 18, thus forming the spirooxindole octahydropentalene derivative 28 (Scheme a, Figure 6). The relative stereochemistry of compound 28 was determined by X-ray crystallographic analysis. Treatment of spirooxindole tetrahydropyran 19 (i.e., with TfOH and compound 1b) under the conditions used to form compound 28 did not result in the formation of compound 28. Treatment of 18 with 1b alone without TfOH did not result in the formation of 19 or 28. Weaker acids, such as acetic acid and trifluoroacetic acid, also did not catalyze the formation of 28 from 18. These results suggest that the use of 1b in a TfOH-catalyzed reaction can adjust the reaction conditions to favor the formation of 28; that is, 1b reduces the acidity of the TfOH-catalyzed reaction environment, allowing the enolate required for C-C bond formation to form 28 from 18. Similarly, the TfOH-catalyzed reaction of 29–31 in the presence of 1b afforded 32–34, respectively (Scheme b, Figure 6). The buffering function of 1b enabled the synthesis of complex spirooxindole octahydropentalenes.
Claims
1. Formula I: 【Chemical 1】 (In the formula, R 1 ~R 5 are each hydrogen or a substituent, wherein the substituent is alkyl, cycloalkyl, aryl, heterocycloalkyl, heteroaryl, or acyl, which may be substituted with one or more selected from the group consisting of alkyl, alkenyl, alkynyl, alkoxy, nitro, cyano, halogen, hydroxy, acyl, carboxyl, carboxamide, carboxylic acid ester, haloalkyl, haloalkoxy, aryl, heterocycloalkyl, and heteroaryl), or Formula II: 【Chemistry 2】 (In the formula, R 1 ~R 3 are each hydrogen or a substituent, and the substituent is alkyl, cycloalkyl, aryl, heterocycloalkyl, heteroaryl, or acyl, which may be substituted with one or more selected from the group consisting of alkyl, alkenyl, alkynyl, alkoxy, nitro, cyano, halogen, hydroxy, acyl, carboxyl, carboxamide, carboxylic acid ester, haloalkyl, haloalkoxy, aryl, heterocycloalkyl, and heteroaryl), as an inhibitor of structural change due to decomposition, isomerization, or racemization caused by an acid or base in a non-aqueous solution containing an organic solvent (wherein the compound in the non-aqueous solution is a compound that changes its structure by decomposition, isomerization, or racemization in the non-aqueous solution).
2. A method for suppressing a structural change in a non-aqueous solution of a compound whose structure changes due to decomposition, isomerization, or racemization in a non-aqueous solution, comprising: The method comprises reacting a compound of Formula I: 【Chemistry 3】 (In the formula, R 1 ~R 5 are each hydrogen or a substituent, wherein the substituent is alkyl, cycloalkyl, aryl, heterocycloalkyl, heteroaryl, or acyl, which may be substituted with one or more selected from the group consisting of alkyl, alkenyl, alkynyl, alkoxy, nitro, cyano, halogen, hydroxy, acyl, carboxyl, carboxamide, carboxylic acid ester, haloalkyl, haloalkoxy, aryl, heterocycloalkyl, and heteroaryl), or Formula II: 【Chemistry 4】 (In the formula, R 1 ~R 3 and a 1,3-dione compound represented by the formula:
3. The method described in claim 2, wherein at least one of R 1 to R 5 in formula I is any of the substituents and is conjugated to a solid support, or at least one of R 1 to R 3 in formula II is any of the substituents and is conjugated to a solid support.
4. The method described in claim 2, wherein the compound is a compound that is isomerized by an acid or a base in a non-aqueous solution, and the method is a method for suppressing the isomerization of the compound in the non-aqueous solution.
5. The method described in claim 2, wherein the compound is a compound that decomposes in a non-aqueous solution by an acid or a base, and the method is a method for inhibiting the decomposition of the compound in the non-aqueous solution.
6. 3. The method of claim 2, wherein the compound is converted in the non-aqueous solution into a product having a different structure.
7. 7. The method of claim 6, wherein the product is produced by reacting two or more molecules of the compound with each other in the non-aqueous solution.
8. A compound in a non-aqueous solution that undergoes a structural change due to decomposition, isomerization, or racemization when exposed to an acid or base; Formula I: 【Chemistry 5】 (In the formula, R 1 ~R 5 are each hydrogen or a substituent, wherein the substituent is alkyl, cycloalkyl, aryl, heterocycloalkyl, heteroaryl, or acyl, which may be substituted with one or more selected from the group consisting of alkyl, alkenyl, alkynyl, alkoxy, nitro, cyano, halogen, hydroxy, acyl, carboxyl, carboxamide, carboxylic acid ester, haloalkyl, haloalkoxy, aryl, heterocycloalkyl, and heteroaryl), or Formula II: 【Chemistry 6】 (In the formula, R 1 ~R 3 are each hydrogen or a substituent, and the substituent is alkyl, cycloalkyl, aryl, heterocycloalkyl, heteroaryl, or acyl, which may be substituted with one or more selected from the group consisting of alkyl, alkenyl, alkynyl, alkoxy, nitro, cyano, halogen, hydroxy, acyl, carboxyl, carboxamide, carboxylic acid ester, haloalkyl, haloalkoxy, aryl, heterocycloalkyl, and heteroaryl; and A non-aqueous solution for suppressing the structural change of the compound in the non-aqueous solution, comprising:
9. a solid support; Conjugated to said solid support is a compound of formula I: 【Chemistry 7】 (In the formula, R 1 ~R 5 are each hydrogen or a substituent, wherein the substituent is alkyl, cycloalkyl, aryl, heterocycloalkyl, heteroaryl, or acyl, which may be substituted with one or more selected from the group consisting of alkyl, alkenyl, alkynyl, alkoxy, nitro, cyano, halogen, hydroxy, acyl, carboxyl, carboxamide, carboxylic acid ester, haloalkyl, haloalkoxy, aryl, heterocycloalkyl, and heteroaryl), or Formula II: 【Chemistry 8】 (In the formula, R 1 ~R 3 are each hydrogen or a substituent, and the substituent is alkyl, cycloalkyl, aryl, heterocycloalkyl, heteroaryl, or acyl, which may be substituted with one or more selected from the group consisting of alkyl, alkenyl, alkynyl, alkoxy, nitro, cyano, halogen, hydroxy, acyl, carboxyl, carboxamide, carboxylic acid ester, haloalkyl, haloalkoxy, aryl, heterocycloalkyl, and heteroaryl; and 1. An article for suppressing, in a non-aqueous solution, a structural change of a compound whose structure changes due to decomposition, isomerization, or racemization in a non-aqueous solution, comprising:
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2-(2-substituted benzoyl)-4-(substituted)- 1,3-cyclohexanediones
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