Method for efficiently expressing foreign protein based on NC048604-1 site in CHO cell genome
By performing site-specific integration at the NC_048604.1 site in the CHO cell genome and utilizing CRISPR/Cas9 technology and homologous recombination, the problem of unstable expression of exogenous proteins in CHO cells was solved, achieving stable expression of exogenous proteins in CHO cells, improving expression efficiency and yield stability, and reducing research and development costs.
Patent Information
- Application Number
- CN202511582511.3
- Authority / Receiving Office
- CN · China
- Patent Type
- Applications(China)
- Current Assignee / Owner
- Filing Date
- 2025-10-31
- Publication Date
- 2025-11-28
- Estimated Expiration
- 2045-10-31
AI Technical Summary
Exogenous protein expression in existing CHO cells is unstable, and random integration leads to positional effects and low screening efficiency, making it difficult to efficiently construct stable recombinant CHO cell lines. In particular, the expression of artificial fusion proteins and non-natural bispecific antibodies presents challenges.
Site-directed integration was performed at the NC_048604.1 site in the CHO cell genome. The foreign protein gene was inserted using CRISPR/Cas9 technology and stable expression was achieved through homologous recombination. The preferred target sequence was within the range of 94142000-94148000 bases in NC_048604.1. A specific promoter was used to control protein expression.
Stable expression of exogenous proteins in CHO cells was achieved, shortening the screening cycle of engineered cell lines, reducing R&D costs, and improving expression efficiency and yield stability.
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Figure CN121022941A_ABST
Abstract
Description
TECHNICAL FIELD
[0001] The present application belongs to the field of genetic technology, and particularly relates to a method for efficiently expressing exogenous proteins based on a NC_048604-1 site in the genome of CHO cells. BACKGROUND
[0002] The Chinese hamster ovary (CHO) cell line was first isolated by Dr. Puck in 1957 and was initially applied to the field of molecular biology research. It is one of the most widely used mammalian cell lines in the field of biopharmaceuticals. At present, nearly 84% of therapeutic recombinant protein drugs in the biopharmaceutical industry are produced by CHO cells, mainly because the recombinant proteins expressed by CHO cells have many advantages such as post-translational modification ability similar to human proteins.
[0003] At present, the recombinant CHO cell strains for expression and production in industrial production are mainly constructed by random integration: the target gene and the screening gene are integrated into the genome of the host cell at the same time, and based on pressure amplification, cells with relatively high expression levels of the target gene are selected for large-scale culture in the later stage. Although the monoclonal antibody protein yield (g / L) of the CHO cell line produced based on random integration is high, due to the uncontrollability of the random integration site and the significant heterogeneity of the expression of the target protein, multiple rounds of large-scale pressure screening are required to determine the appropriate clone, which is time-consuming, labor-intensive, and high-cost, and its low efficiency seriously hinders the progress of industrial projects.
[0004] At the same time, since random integration cannot control the insertion site of the target gene, the selected cell strains are often affected by the "position effect", that is, the expression of the exogenous gene is affected by the space of the inserted chromosome region, and the loss of the copy number of the target gene and gene rearrangement with the increase of the number of passages will cause the cell strain to exhibit unstable expression. The instability of the recombinant CHO cell strain constructed by this method can reach 8%-63%, and the yield will decrease over time, which is not conducive to the quality control of the production process. Moreover, for artificial fusion proteins and non-natural bispecific antibodies and other difficult-to-express proteins, it is still challenging to develop high-yield cell strains using existing integration methods. These problems ultimately lead to an increase in the research and development period and cost of enterprises. Therefore, a controllable and predictable cell strain development process is needed. SUMMARY
[0005] To solve the above technical problems, the present application provides a site for stable expression of exogenous proteins in the genome of CHO cells, which is clear and fixed, can insert different exogenous protein genes, and can be stably expressed. At the same time, the site-specific integration of exogenous protein genes can greatly shorten the screening period of engineering cell strains and reduce research and development costs.
[0006] The application provides a site for stably expressing a target protein in CHO cells, wherein the site for stably expressing the target protein is a range of 94142000-94148000 bases in NC_048604.1 on chromosome X in CHO cells, and the application is inserting an exogenous target protein gene into the range, wherein the nucleotide sequence in the range of 94142000-94148000 bases in NC_048604.1 is shown in SEQ ID NO: 1. Preferably, the range is a range of 94143000-94147000 bases, and specifically a range of 94144000-94145000 bases.
[0007] Preferably, the coding gene of the target protein for stable expression is located in a region between 5' homologous arms and 3' homologous arms on the expression vector, and the 5' homologous arms and 3' homologous arms are upstream and downstream homologous arms of a target sequence in the range of 94142000-94148000 bases of the NC_048604.1 gene site on chromosome X that can be recognized by CRISPR / Cas9 technology.
[0008] Further preferably, the 5'-NNNNNNNNNNNNNNNNNNNNNGG-3' in the range of 94142000-94148000 bases near the site can be recognized by CRISPR / Cas9 technology as a target sequence, and preferably, the target sequence is 5'-AGTACCTGCCTAGCAAGCACAGG-3'.
[0009] The target protein is one of a polypeptide, a functional protein, an antibody, or a fusion protein, and preferably, the protein has a molecular weight of less than 160 kDa.
[0010] The application also provides an expression vector for expressing a target protein in CHO cells, which is used for inserting a coding gene of the target protein into a site for stably expressing the target protein in CHO cells; for example, a site-specific integration vector based on a recombinase, a site-specific insertion vector for gene editing, or an integration vector based on homology-directed repair.
[0011] Preferably, the coding gene of the target protein is located in a region between 5' homologous arms and 3' homologous arms on the expression vector, and the 5' homologous arms and 3' homologous arms are homologous sequences with a length of 750 bp upstream and downstream of the site for stably expressing the target protein.
[0012] The site for stably expressing the target protein is the 94144581 base of the NC_048604.1 gene site on chromosome X in CHO cells.
[0013] Specifically, the expression vector is suitable for expression in CHO cells; the length of the homologous sequence upstream and downstream is 600-900 bp, for example 700-800 bp, specifically 750 bp.
[0014] More specifically, the target sequence is designed in the sequence within 3000 bp upstream and downstream of base 94144581 of CHO cell gene NC_048604.1, specifically within the range of 94142000-94148000 bases near base 94144581 of NC_048604.1.
[0015] Further, the target sequence is 5'-AGTACCTGCCTAGCAAGCACAGG-3'.
[0016] The target sequence is 5'-TATTAGGTGTGTACCACAGAAGG-3'.
[0017] The target sequence is 5'-GGTGTGTACCACAGAAGGTGTGG-3'.
[0018] The target sequence is 5'-AACACCATTCACCAACAGTGTGG-3'.
[0019] The target sequence is 5'-CATGGCAACAGTGGTAATAGTGG-3'.
[0020] The target sequence is 5'-AGGGTCAATGCAAACAAGCACGG-3'.
[0021] The target sequence is 5'-GGGTTGGCAAAATGGCTCAGTGG-3'.
[0022] The target sequence is 5'-GTGATGTGGAGGCAGGAGGAAGG-3'.
[0023] The target sequence is 5'-TCACCACAGTTCAAATACGGAGG-3'.
[0024] The target sequence is 5'-AGGCATATGCGAGCATGCCCGGG-3'.
[0025] The target sequence is 5'-GTGCAAACATGACCCTAAGGAGG-3'.
[0026] The target sequence is 5'-AAGAAGTGAGCCAGGCATGGTGG-3'.
[0027] The target sequence is 5'-TGGTTCTCAGTAGAAGAGGAAGG-3'.
[0028] The target sequence is 5'-CCTAGCATGCATGAAGCCCTGGG-3'.
[0029] The target sequence is 5'-CACACACACACACACTGGGGGGG-3'.
[0030] In the embodiment, the target protein is one of polypeptide, functional protein, antibody or fusion protein, preferably, the molecular weight of the protein is less than 160 kDa.
[0031] Further, the expression vector further comprises a promoter sequence upstream of the coding gene of the target protein, and the promoter controls the expression of the protein.
[0032] Further, the promoter includes but is not limited to: CMV (strong mammalian expression promoter derived from cytomegalovirus), EF-1a (strong mammalian expression promoter derived from elongation factor 1a), SV40 (strong mammalian expression promoter derived from simian vacuole virus 40), and artificially constructed combination promoter CAG (consisting of cytomegalovirus CMV, early enhancer element and chicken beta-actin promoter.
[0033] The application further provides a CHO recombinant cell line, which comprises an exogenous target protein gene inserted at a site of stable expression of the target protein, and the site of stable expression of the target protein is the NC_048604.1 gene site at base 94144581 on chromosome X in CHO cells.
[0034] Preferably, the CHO cell is obtained by the expression vector, sgRNA plasmid corresponding to the target sequence and Cas9 plasmid; more preferably, the CHO cell has a knockout pressure screening tag, for example, a glutamine synthetase gene.
[0035] The application further provides a construction method of a CHO recombinant cell line for stable expression of a target protein, which comprises the following steps:
[0036] (1) The plasmid vector is transfected into a CHO cell in which a glutamine synthetase gene has been knocked out by using an electroporation method, to obtain a recombinant CHO-S-KOGS cell pool;
[0037] The plasmids are, respectively, the expression vector, the sgRNA plasmid corresponding to the target sequence, and the Cas9 plasmid; preferably, the molar ratio of the three plasmids is 1:1:2; the transfection is performed using an electroporator.
[0038] (2) The recombinant CHO-S-KOGS cell pool was cultured in well plates or shake flasks;
[0039] (3) Screening to obtain CHO recombinant cells that stably express the target protein.
[0040] When the glutamine synthase gene has been knocked out in CHO cells, the culture in step (2) is carried out using a culture medium without glutamine, and the collected cell culture supernatant is used for dot blot hybridization detection for screening.
[0041] The present invention further provides a method for stably expressing a target protein, comprising the step of fermenting and culturing CHO recombinant cells stably expressing the target protein obtained by the construction method to produce the target protein, preferably including the step of isolating the produced target protein.
[0042] Preferably, the fermentation culture is a fed-batch fermentation culture, and the glucose is maintained at 3.5-4.5 g / L (specifically 4.0 g / L). Fermentation is stopped when the cell viability reaches 80%.
[0043] The beneficial technical effects of this invention are as follows:
[0044] This invention employs site-directed integration technology to integrate the target gene into a stable, high-expression exogenous protein region. This not only overcomes the problem of unstable exogenous protein expression caused by the "position effect" in random integration, but also avoids the time-consuming and laborious process of repeated screening of single clones of high-expression exogenous proteins. This shortens the cycle of constructing biopharmaceutical high-expression engineered cell lines to 1-2 months, reducing research and development time and costs.
[0045] This invention inserts exogenous protein genes at specific sites in the CHO cell genome to achieve stable and high expression. Attached Figure Description
[0046] Figure 1 Fluorescence intensity analysis of lentivirus integrated libraries by flow cytometry screening.
[0047] Figure 2 Cas9 expression plasmid.
[0048] Figure 3 : sgRNA plasmid.
[0049] Figure 4 Donor plasmid.
[0050] Figure 5 :mcherry-ccdb plasmid.
[0051] Figure 6 :ccdb-antiPD1-GS-GFP plasmid.
[0052] Figure 7 Screening and identification of monoclonal cell lines expressing anti-PD1 antibody protein.
[0053] Figure 8 Results of 5' and 3' junction PCR amplification of site-specific integration of the anti-PD1 antibody gene and Sanger sequencing analysis.
[0054] Figure 9 Copy number analysis of anti-PD1 antibody genes integrated at specific sites.
[0055] Figure 10 Analysis of anti-PD1 antibody protein yield in the supernatant of well plate fermentation culture.
[0056] Figure 11 Stability analysis of anti-PD1 antibody protein expression.
[0057] Figure 12 Analysis of anti-PD1 antibody protein yield in the supernatant of shake-flask fed-batch fermentation culture. Detailed Implementation
[0058] The present invention will now be described in detail with reference to the accompanying drawings and embodiments.
[0059] Example 1: Construction of a high-expression, stable integration lentiviral library:
[0060] A lentiviral vector containing a green fluorescent tag (GFP) and a glutamine synthase gene (GS) was constructed and packaged to obtain a titer of approximately 1 × 8⁸. 10 Lentiviral.
[0061] CHO-S-KOGS cells were infected with a green fluorescent lentivirus with an MOI value less than 0.3 × (number of viruses per cell). 96 hours after infection, 1 × 10⁶ cells were sorted by flow cytometry. 6 Cells containing green fluorescence were selected. Lentivirally infected cells were screened using a medium without glutamine under pressure, with selection occurring when the cell count reached 8 × 10⁶ cells / day. 6 Cells were passaged at a concentration of 1 × 10⁹ / ml, with the initial concentration controlled at 1 × 10⁹ / ml. 6 / ml, after 60 passages, the dominant cell lines were enriched to obtain a stable cell bank that highly expresses green fluorescent protein. The top 1% of cells by fluorescence intensity were enriched by flow cytometry to obtain a dominant integrated cell pool that stably and highly expresses exogenous protein. After cell expansion and flow cytometry analysis, the fluorescence intensity was significantly increased. Figure 1 ).
[0062] Example 2, Lentiviral Integration Site Analysis:
[0063] Information on stable integration sites of highly expressed exogenous proteins was obtained by combining nested PCR with next-generation sequencing and bioinformatics techniques.
[0064] First, the DNA of the top 1% of cells enriched above was extracted, and specific primers LTRI were designed for the 3'LTR region of the lentiviral vector. Linear PCR was then performed using single-end DPO primers.
[0065] The PCR products were purified using AMPure XP magnetic beads; adapters were added to the 3' end of the purified single-stranded DNA using the VAHTS® ssDNA Library Prep Kit for Illumina.
[0066] Double-stranded DNA was synthesized using Extension Primer and Extension Enzyme Mix, and the double-stranded DNA was purified using AMPureXP magnetic beads. The purified DNA was then used as a template for index PCR using primer LTRII.
[0067] Sequencing libraries were purified using AMPure XP magnetic beads and then sequenced.
[0068] Data Analysis: First, a Python script was used to filter reads containing specific exogenous sequences (LTRs), allowing a maximum of 6 base mismatches, and output a filtered FastQ file. The cutadapt (version 2.8) tool was used to truncate the filtered FastQ file, removing 66 bases (including primers and exogenous sequences) from the 5' end using the -u 66 parameter, resulting in a clean sequence containing only the target insert fragment. The bwa mem (Version: 0.7.17-r1188) algorithm was used, with a specified complex genome (complexgenome.fna) as a template, and 4 threads (-t 4) were set up to align the processed sequences to the genome. Successfully aligned genome data was output as a SAM format alignment result file. The awk command was used to extract the chromosome sequence and the aligned position sequence from the SAM file; this position is the insertion site. The number of identical chromosomes and positions was then counted, and relative gene position annotations were performed. At nucleotide 94,144,581 of the CHO genome X chromosome reference sequence NC_048604.1, a total of 45,632 reads were detected, indicating an intergenic location. Based on this specific location, the relevant reference sequence was downloaded, and an expression vector was designed and constructed to validate the site for stable high expression of exogenous proteins.
[0069] Example 3: Target sequence selection:
[0070] Based on the high-expression exogenous protein stable sites obtained from the above analysis, anti-PD1 antibody proteins were selected for site-specific integration using CRISPR / Cas9 technology. The first step was to design the target sequence for the site. The selected site was a sequence 3000 bp upstream and downstream of chromosome 94144581 on chromosome X (its nucleotide sequence is shown in SEQ ID NO: 1). The DeepHF |SpCas9 & Base Editor Efficiency Prediction online prediction system was used to design the sgRNA sequence and select the most efficient target sequences.
[0071] The online prediction system scores the editing efficiency of the identified 5'-NNNNNNNNNNNNNNNNNNNNNGG-3' target sequence: LOW efficacy (score < 0.56); MEDIUM efficasy (0.56 <= score <= 0.74); HIGH efficacy (score > 0.74).
[0072] The target sequences were selected as follows:
[0073] Target sequence 5'-ATGACCTGCCTAGCAAGCACAGG-3' (SEQ ID No:2), score = 0.71.
[0074] Target sequence 5'- TATTAGGTGTGTACCACAGAAGG -3' (SEQ ID No:3), score=0.70.
[0075] Target sequence 5'- GGTGTGTACCACAGAAGGTGTGG-3' (SEQ ID No:4), score=0.68.
[0076] Target sequence 5'-AACACCATTCACCAACAGTGTGG-3' (SEQ ID No:5), score=0.681;
[0077] Target sequence 5'-CATGGCAACAGTGGTAATAGTGG-3' (SEQ ID No: 6), score=0.649;
[0078] Target sequence 5'-AGGGTCAATGCAAACAAGCACGG-3' (SEQ ID No:7), score=0.644;
[0079] Target sequence 5'-GGGTTGGCAAAATGGCTCAGTGG-3' (SEQ ID No:8), score=0.675;
[0080] Target sequence 5'-GTGATGTGGAGGCAGGAGGAAGG-3' (SEQ ID No: 9), score=0.654;
[0081] Target sequence 5'-TCACCACAGTTCAAATACGGAGG-3' (SEQ ID No:10), score=0.683;
[0082] Target sequence 5'-AGGCATATGCGAGCATGCCCGGG-3' (SEQ ID No: 11), score=0.635;
[0083] Target sequence 5'-GTGCAAACATGACCCTAAGGAGG-3' (SEQ ID No:12), score=0.673;
[0084] Target sequence 5'-AAGAAGTGAGCCAGGCATGGTGG-3' (SEQ ID No:13), score=0.672;
[0085] Target sequence 5'-TGGTTCTCAGTAGAAGAGGAAGG-3' (SEQ ID No:14), score=0.682;
[0086] Target sequence 5'-CCTAGCATGCATGAAGCCCTGGG-3' (SEQ ID No:15), score=0.64;
[0087] Target sequence 5'-CACACACACACACACTGGGGGGG-3' (SEQ ID No:16), score=0.642;
[0088] Furthermore, the three sequences with the highest predicted editing efficiency were selected as target sequences. Using an in vitro Cas9 enzyme digestion kit, the optimal target sequence 5'-TATTAGGTGTGTACCACAGAAGG-3' (SEQ ID No:17) was selected based on the digestion efficiency.
[0089] Example 4: Site-specific integration of an anti-PD-1 protein gene carrying the green fluorescent gene (GFP) and the glutamine synthase gene (GS)
[0090] CRISPR / Cas9-mediated site-specific genome editing and homologous recombination were used to integrate the green fluorescent protein gene, GS gene, and anti-PD1 antibody protein gene into target sites. CRISPR / Cas9-mediated homologous recombination requires the construction of sgRNA plasmids and Donor Plasmids, the construction process of which is as follows:
[0091] 1. Construction of sgRNA plasmid
[0092] 1) Synthesize oligonucleotide chains according to the target sequence selected in Example 3:
[0093] SgRNA-F: 5'-CACCGTATTAGGTGTGTACCACAGA -3' (SEQ ID No:18)
[0094] SgRNA-R: 5'-AAACTCTGTGGTACACACCTAATAC-3' (SEQ ID No: 19).
[0095] 2) Anneal and link the synthesized fragments.
[0096]
[0097] PCR instrument: 95℃ for 5 min, then store at 4℃.
[0098] 3) Ligate the annealed oligonucleotide chain to the sgRNA-ccdB plasmid (the sgRNA backbone plasmid already available in the laboratory is ligated to the annealed oligonucleotide chain via the Golden Gate).
[0099]
[0100] The reaction procedure is as follows:
[0101] 37℃ for 3 min, then 16℃ for 3 min, repeat 25 times, then 50℃ for 3 min, 80℃ for 3 min, and finally 4℃ for 3 min.
[0102] 4) Transformation to DH5α competent state;
[0103] 5) Select positive single clones and sequence them using the universal primer sgRNA-CX-F: 5'-GCCTATTTCCCATGATTCCTTC-3' (SEQ ID No: 20);
[0104] 6) Expand positive monoclonal strains and extract plasmids.
[0105] 2. Donor plasmid construction
[0106] Specific information about the Donor plasmid is as follows: Figure 4 As shown, this plasmid mainly includes the anti-PD1 antibody protein expression gene, GS selection gene, GFP and mCherry positive and negative selection genes, two homologous recombination arm genes (5'arm and 3'arm), and the N20+PAM gene sequence containing the target gene, among other key genes. The specific construction method is as follows:
[0107] 1) The 5' homologous arm fragment and the 3' homologous arm fragment were derived from the genomic DNA template, and the mCherry fragment was derived from the mCherry-ccdb plasmid constructed in the laboratory in the previous stage. Figure 5 PCR was performed using primer design, and the relevant fragments were obtained by gel extraction using a kit.
[0108] 2) The recovered fragment was combined with the ccdb plasmid vector containing genes such as anti-PD1, GFP, and GS, which had been previously constructed in the laboratory. Figure 6 The ligation and reaction procedure are the same as the sgRNA plasmid construction procedure described above, except that the restriction endonuclease is replaced by Esp3I instead of Bsa1.
[0109] 3) Select positive single clones, sequence them, and extract plasmids after amplification.
[0110] 3. Screening and identification of single-copy, site-directed integration monoclonal cell lines at base 94144581 of NC_048604.1
[0111] The constructed sgRNA plasmid ( Figure 3 ) and Donor plasmid ( Figure 4 ) and Cas9 plasmids containing the Cas9 protein ( Figure 2 Three plasmids were co-transfected into CHO-S-KOGS cells cultured at 37°C and 5% CO2, with a molar ratio of 1:1:2. Transfection was performed using an electroporator, and selection was conducted on glutamine-free medium. The Donor donor plasmid contains the N20+PAM sequence of the target gene outside its 5' and 3' arm homologous recombination arms. Therefore, after co-transfection, the Donor plasmid was simultaneously recognized and cleaved into linear fragments, improving integration efficiency. Through homologous recombination, the target gene was integrated at the target site under the selection pressure of glutamine-free medium. Simultaneously, the mCherry in the Donor plasmid served as a negative selection tag, excluding randomly integrated monoclonal cells during selection, reducing the workload of later targeted integration monoclonal cell line selection. Once cell viability stabilized and the proportion of green fluorescence increased, monoclonal cells were sorted using BD flow cytometry, selecting cells expressing green fluorescence but not red fluorescence, and then seeded into 96-well plates.
[0112] After monoclonal cell culture reached 14 days, cell culture supernatant expressing green fluorescence but not red fluorescence was collected. 3 μL of this supernatant was spotted onto an NC membrane and labeled. The membrane was then dried at 37°C, blocked with 5% skim milk powder for 30 min, washed three times with TBST, incubated with goat anti-rabbit secondary antibody (1 μg / mL) for 1 h, washed three times with TBST, and then developed using ECL. Cell lines expressing and secreting anti-PD1 antibody protein were detected. Based on the dot blot hybridization results of the monoclonal supernatant, a total of 38 positive monoclonal cells were initially screened. Figure 7 );
[0113] Positive monoclonal cells were expanded and cultured. A portion was taken for genomic analysis, and PCR identification was performed using 5' junction PCR, 3' junction PCR, and Sanger sequencing. Figure 8 ) and copy number identification identified 12 monoclonal cell lines with single-copy integration of the anti-PD1 gene ( Figure 9 ).
[0114] Expand the monoclonal cell lines obtained above.
[0115] Test example:
[0116] The expression of anti-PD1 antibody protein in the monoclonal cell lines obtained in Example 4 was detected using the Octet molecular interaction instrument.
[0117] The 12 monoclonal cell lines obtained in Example 4 were subjected to plate fermentation at a rate of 2 × 10⁻⁶. 5 Cells were initially seeded at an initial concentration of 1.91 μg / ml and fermented for 6 days. The supernatant was collected, and the expression level of anti-PD1 antibody protein in the fermentation broth was detected using an Octet molecular interaction analyzer and a Protein A sensor. The results showed that the expression level of single-copy integrin ranged from 1.91 to 16.53 μg / ml. Figure 10 The average value was 9.82 μg / ml.
[0118] Four monoclonal cell lines (M57-2, M57-3, M57-7, and M57-28) were selected for 20 consecutive weeks of plate fermentation. Protein expression stability was assessed at weeks 4, 8, 12, 16, and 20. The results showed that all monoclonal cell lines stably expressed anti-PD1 antibody protein, indicating good expression stability at this site. Figure 11 As shown.
[0119] Three monoclonal strains were selected for fed-batch shake-flask fermentation culture every other day, with an initial cell concentration of 6 × 10⁶ cells on day 0. 5 / ml inoculation, fed culture began on the fourth day. EmCDCHO101 was fed culture medium A at 4% volume, and EmCDCHO101 was fed culture medium B at 0.4% volume. Glucose was maintained at 4g / L. When cell viability reached 80%, cell supernatant was collected. The expression level of anti-PD1 antibody protein in the fermentation broth was detected using a Protein A sensor. The results showed that the expression level of the single-copy integrated anti-PD1 gene at this site in fed shake flask culture ranged from 109.10-211.73 μg / ml, with an average of 150.87 μg / ml. Figure 12 As shown.
[0120] In this invention, the CRISPR / Cas9-mediated genome editing technology is mainly used for site-specific integration. Therefore, target sequences are designed mainly for upstream and downstream sequences within 6000 bp. The 15 target sequences screened in Example 3 of this invention cover most of the upstream and downstream sequences within 6000 bp of this invention. The range of bases 94142000-94148000 in the CHO cell gene NC_048604.1 of this invention can successfully construct stable expression cell lines with site-specific integration and can stably express the target protein.
[0121] The embodiments described above are merely preferred embodiments for fully illustrating the present invention, and the scope of protection of the present invention is not limited thereto. Equivalent substitutions or modifications made by those skilled in the art based on the present invention are all within the scope of protection of the present invention. The scope of protection of the present invention is defined by the claims.
Claims
1. The application of a site for stable expression of a target protein in CHO cells in the stable expression of the target protein, characterized in that, The site for stable expression of the target protein is the range of bases 94142000-94148000 on chromosome X in CHO cells. The application involves inserting an exogenous target protein gene within this range. The nucleotide sequence of the range of bases 94142000-94148000 is shown in SEQ ID NO:
1.
2. The application as described in claim 1, characterized in that, The site for stable expression of the target protein is at base 94144581, which is located within the range of bases 94142000-94148000 on chromosome X in CHO cells.
3. The application as described in claim 1, characterized in that, The sequence within the 94142000-94148000 base range that can be recognized by CRISPR / Cas9 technology is the 5'-AGTACCTGCCTAGCAAGCACAGG-3' target sequence.
4. The application as described in claim 1, characterized in that, The target protein is one of a polypeptide, a functional protein, an antibody, or a fusion protein, and the target protein is a protein with a molecular weight of less than 160 kDa.
5. An expression vector for expressing a target protein in CHO cells, characterized in that, It is an expression vector used to insert the gene encoding the target protein into a stable expression site of the target protein in CHO cells; The site for stable expression of the target protein is in the range of bases 94142000-94148000 on chromosome X in CHO cells, and the application involves inserting an exogenous target protein gene within this range. The nucleotide sequence in the range of 94142000-94148000 bases is shown in SEQ ID NO:
1.
6. The expression vector as described in claim 5, characterized in that, These include site-specific integration vectors based on recombinases, site-directed insertion vectors for gene editing, or integration vectors based on homology-directed repair.
7. The expression vector as described in claim 5, characterized in that, The gene encoding the target protein that is stably expressed is located in the region between the 5' and 3' homologous arms on the expression vector. The 5' and 3' homologous arms are the upstream and downstream homologous arms of 5'-AGTACCTGCCTAGCAAGCACAGG-3', which is located at base 94144581 on chromosome X and can be recognized by CRISPR / Cas9 technology.
8. The expression vector as described in claim 5, characterized in that, The expression vector further includes a promoter sequence located upstream of the coding gene of the target protein, wherein the promoter controls the expression of the protein; The promoters are selected from: CMV, EF-1a, SV40, and the combined promoter CAG.
9. A CHO recombinant cell line, characterized in that, It includes inserting an exogenous target protein gene at a site where the target protein is stably expressed, said site being nucleotide 94144581 on chromosome X in CHO cells.
10. The CHO recombinant cell line as described in claim 9, characterized in that, It is obtained by integrating the target protein gene into the 94144581st base of chromosome X of CHO cells using the expression vector as described in any one of claims 5 to 8.
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