Anti-salivary liquefied carbohydrate antigen-6 antibody, and reagent and kit for detecting salivary liquefied carbohydrate antigen-6

Abstract

The invention discloses an antibody for resisting salivary liquefied carbohydrate antigen-6 or a reagent and a kit for detecting the salivary liquefied carbohydrate antigen-6, and relates to the field of antibodies. The anti-salivary liquefied carbohydrate antigen-6 antibody disclosed by the invention comprises a heavy chain complementarity determining region and a light chain complementarity determining region, provides an important raw material source for detection of salivary liquefied carbohydrate antigen-6, and has good affinity or activity.

Description

Technical Field

[0001] The present invention relates to the field of antibody technology, and in particular to an anti-sialylated sugar chain antigen-6 antibody, a reagent and a kit for detecting sialylated sugar chain antigen-6. Background Art

[0002] Interstitial Lung Disease (ILD) is a general term for a series of diseases. Depending on the degree of the lesions, it is also called diffuse lung disease, interstitial pneumonia, and pulmonary fibrosis. Since these diseases are related to interstitial infiltration and fibrotic lesions in the lungs, they are called ILD. Known causes of ILD include: inhalation of inorganic substances, organic substances, toxic waste gases, radiation damage, drugs, infections, etc. In addition, there is a high proportion of ILD with unknown causes, and possible causes include connective tissue lesions, sarcoidosis, chronic eosinophilic pneumonia, etc. ILD has an insidious onset, and the main manifestations include progressive shortness of breath, dyspnea, decreased activity tolerance, and hypoxemia in the late stage. Ground-glass lesions and honeycomb lungs appear on X-ray examinations.

[0003] Sialyl glycan antigen-6 (Krebs Von den Lungen-6, KL-6) is a glycoprotein in mucin (MUC) above 5000 kDa, mainly produced by type II alveolar epithelial cells. Currently, many studies have shown that KL-6 is significantly correlated with the occurrence, progression, drug efficacy and prognosis of ILD lesions. The serum KL-6 level of ILD patients increases, so KL-6 can be used as an activity assessment marker for ILD.

[0004] Bioimmunological detection methods have the advantages of being simple, rapid and inexpensive. Bioimmunological methods can accurately detect KL-6 in vivo. Common bioimmunological methods include radioimmunoassay, enzyme-linked immunosorbent assay, chemiluminescence, etc.

[0005] The above methods all require antibodies against KL-6 to be implemented, therefore, those skilled in the art have a strong demand for anti-KL-6 antibodies with good performance. Summary of the invention

[0006] The present application provides an antibody or a functional fragment thereof, which provides an important source of raw materials for the detection of sialylated sugar chain antigen-6 and has good activity or affinity.

[0007] In order to achieve the above-mentioned object, according to one aspect of the present invention, an antibody or a functional fragment thereof is provided, wherein the antibody or the functional fragment thereof comprises three complementary determining regions of a heavy chain variable region having an amino acid sequence of any one of SEQ ID NOs: 17, 18, 19, and 20 and three complementary determining regions of a light chain variable region having an amino acid sequence of any one of SEQ ID NOs: 21, 22, and 23.

[0008] In order to achieve the above object, according to two aspects of the present invention, an antibody or a functional fragment thereof is provided, wherein the antibody or the functional fragment thereof comprises the following complementary determining regions:

[0009] HCDR1, which comprises or consists of the amino acid sequence shown in SEQ ID NO: 1;

[0010] HCDR2, which comprises or consists of the amino acid sequence shown in SEQ ID NO: 2;

[0011] HCDR3 comprising or consisting of the amino acid sequence shown in SEQ ID NO: 3 or 31;

[0012] LCDR1, which comprises or consists of the amino acid sequence shown in SEQ ID NO: 4 or 32;

[0013] LCDR2, which comprises or consists of the amino acid sequence shown in SEQ ID NO:5;

[0014] LCDR3 comprises or consists of the amino acid sequence shown in SEQ ID NO:6.

[0015] In order to achieve the above-mentioned object, according to the third aspect of the present invention, an antibody or a functional fragment thereof is provided, comprising a heavy chain variable region and / or a light chain variable region, wherein the amino acid sequence of the heavy chain variable region is shown in any one of SEQ ID NOs: 17, 18, 19, and 20; and the amino acid sequence of the light chain variable region is shown in any one of SEQ ID NOs: 21, 22, and 23.

[0016] In order to achieve the above-mentioned object, according to the fourth aspect of the present invention, an antibody or a functional fragment thereof is provided, comprising a heavy chain and / or a light chain, wherein the amino acid sequence of the heavy chain is shown in any one of SEQ ID NOs: 24, 25, 26, and 27; and the amino acid sequence of the light chain is shown in any one of SEQ ID NOs: 28, 29, and 30.

[0017] In order to achieve the above object, according to the fifth aspect of the present invention, an antibody conjugate is provided, wherein the antibody conjugate comprises the above antibody or a functional fragment thereof.

[0018] In order to achieve the above object, according to the sixth aspect of the present invention, a reagent or a kit is provided, wherein the reagent or the kit comprises the above antibody or a functional fragment thereof or the above antibody conjugate.

[0019] To achieve the above object, according to the seventh aspect of the present invention, a method for detecting sialylated sugar chain antigen-6 is provided, comprising: a) contacting the above-mentioned antibody or its functional fragment, antibody conjugate, or reagent or kit with sialylated sugar chain antigen-6 in a sample to be detected under conditions sufficient for an antibody / antigen binding reaction to form an immune complex; and b) detecting the presence of the immune complex, wherein the presence of the complex indicates the presence of the antigen in the test sample.

[0020] In order to achieve the above object, according to the eighth aspect of the present invention, a nucleic acid is provided, which encodes the above antibody or a functional fragment thereof.

[0021] In order to achieve the above object, according to the ninth aspect of the present invention, a vector is provided, wherein the vector comprises the above nucleic acid.

[0022] In order to achieve the above object, according to the tenth aspect of the present invention, a cell is provided, wherein the cell comprises the above nucleic acid, vector or expresses the above antibody or a functional fragment thereof.

[0023] In order to achieve the above object, according to the eleventh aspect of the present invention, a method for preparing the above antibody or a functional fragment thereof is provided, the method comprising culturing the above cell.

[0024] In order to achieve the above object, according to the twelfth aspect of the present invention, there is provided a use of the above-mentioned antibody or its functional fragment, antibody conjugate, reagent or kit in detecting or preparing a product for detecting sialylated sugar chain antigen-6. BRIEF DESCRIPTION OF THE DRAWINGS

[0025] In order to more clearly illustrate the technical solutions of the embodiments of the present invention, the drawings required for use in the embodiments are briefly introduced below. It should be understood that the following drawings only show certain embodiments of the present invention and therefore should not be regarded as limiting the scope. For ordinary technicians in this field, other related drawings can be obtained based on these drawings without creative work.

[0026] Figure 1 The results of reducing SDS-PAGE of Anti-KL-6 7C9 Rmb1 are shown. DETAILED DESCRIPTION

[0027] In the first aspect, an embodiment of the present invention provides an antibody or a functional fragment thereof, wherein the antibody or the functional fragment thereof comprises three complementary determining regions of a heavy chain variable region having an amino acid sequence of any one of SEQ ID NOs: 17, 18, 19, and 20 and three complementary determining regions of a light chain variable region having an amino acid sequence of any one of SEQ ID NOs: 21, 22, and 23.

[0028] It should be noted that HCDR1, HCDR2 and HCDR3 are amino acid sequences consistent with HCDR1, HCDR2 and HCDR3 of the same heavy chain variable region defined in the antibody or its functional fragment described in the first aspect, and LCDR1, LCDR2 and LCDR3 are amino acid sequences consistent with LCDR1, LCDR2 and LCDR3 of the same light chain variable region defined in the antibody or its functional fragment described in the first aspect.

[0029] For example, the HCDR1, HCDR2, and HCDR3 are amino acid sequences consistent with HCDR1, HCDR2, and HCDR3 of the heavy chain variable region shown in SEQ ID NO: 17; the LCDR1, LCDR2, and LCDR3 are amino acid sequences consistent with LCDR1, LCDR2, and LCDR3 of the light chain variable region shown in SEQ ID NO: 21.

[0030] Under the Kabat definition, the amino acid sequences of HCDR1, HCDR2 and HCDR3 of the heavy chain variable region SEQ ID NO:17 are shown as SEQ ID NO:1, SEQ ID NO:2 and SEQ ID NO:3, respectively, and the amino acid sequences of HCDR1, HCDR2 and HCDR3 of the antibody or its functional fragment are also shown as SEQ ID NO:1, SEQ ID NO:2 and SEQ ID NO:3, respectively.

[0031] Under the Kabat definition, the amino acid sequences of LCDR1, LCDR2 and LCDR3 of the light chain variable region SEQ ID NO:21 are shown in SEQ ID NO:4, SEQ ID NO:5 and SEQ ID NO:6, respectively, and the amino acid sequences of LCDR1, LCDR2 and LCDR3 of the antibody or its functional fragment are also shown in SEQ ID NO:4, SEQ ID NO:5 and SEQ ID NO:6, respectively.

[0032] In the present invention, the term "antibody" is used in the broadest sense and may include full-length monoclonal antibodies, bispecific or multispecific antibodies, and chimeric antibodies, so long as they exhibit the desired biological activity.

[0033] In the present invention, the term "complementarity determining region", "CDR" or "CDRs" refers to the highly variable region of the heavy and light chains of immunoglobulins, and refers to the region containing one or more or even all of the major amino acid residues that play a role in the binding of an antibody or antigen-binding fragment to its recognized antigen or epitope. In a specific embodiment of the present invention, CDRs refers to the highly variable region of the heavy and light chains of the antibody.

[0034] In the present invention, the heavy chain complementarity determining region is represented by HCDR, which includes HCDR1, HCDR2 and HCDR3; the light chain complementarity determining region is represented by LCDR, which includes LCDR1, LCDR2 and LCDR3.

[0035] The definition methods of CDR are well known in the art, and the CDR definition methods include: Kabat definition, Chothia definition, IMGT definition, Contact definition and AbM definition. As described herein, "Kabat definition" refers to the definition system described in Kabat et al., US Pept. of Health and Human Services, "Sequence of Proteins of Immunological Interest" (1983). "Chothia definition" refers to Chothia et al., J Mol Biol 196: 901-917 (1987). There are other CDR definition methods that may not strictly follow one of the above schemes, but will still overlap with at least a portion of the CDR region defined by Kabat, although they may be shortened or extended based on predictions or experimental results of specific residues or residue groups. Exemplary defined CDRs are listed in Table 1 below, and the definitions in different documents are slightly different. Given the variable region amino acid sequence of an antibody, a person skilled in the art can routinely determine which residues contain a specific CDR. It should be noted that CDRs defined by other methods not limited to Table 1 also belong to the scope of protection of the present disclosure.

[0036] Table 1: CDR Definition 1

[0037] CDR Kabat <![CDATA[AbM 2 ]]> IMGT Chothia HCDR1 <![CDATA[H31~H35 3 ]]> <![CDATA[H26~H35 3 ]]> <![CDATA[H26~H33..5 5 ]]> <![CDATA[H26~H32..34 4 ]]> HCDR2 H50~H65 H50~H58 H51~H57 H52~H56 HCDR3 H95~H102 H95~H102 H93~H102 H95~H102 LCDR1 L24~L34 L24~L34 L27~L32 L24~L34 LCDR2 L50~L56 L50~L56 L50~L51 L50~L56 LCDR3 L89~L97 L89~L97 L89~L97 L89~L97

[0038] 1The numbering of all CDR definitions in Table 1 is based on the Kabat numbering system (see below), with the amino acid numbering on the heavy chain represented by "H+number" and the amino acid numbering on the light chain represented by "L+number". One of ordinary skill in the art can unambiguously map the Kabat numbering system to any variable region sequence without relying on any experimental data other than the sequence itself. As used herein, "Kabat numbering" refers to the numbering system described by Kabat et al., U.S. Patent. of Health and Human Services, "Sequence of Proteins of Immunological Interest" (1983).

[0039] 2 "AbM" as used in Table 1 with a lowercase "b" refers to CDRs defined by Oxford Molecular's "AbM" antibody modeling software.

[0040] 3 If both H35A and H35B are absent, CDR-H1 ends at position 35; if only H35A is present, CDR-H1 ends at position 35A; if both H35A and H35B are present, CDR-H1 ends at position 35B.

[0041] 4 If both H35A and H35B are absent, CDR-H1 ends at position 32; if only H35A is present, CDR-H1 ends at position 33; if both H35A and H35B are present, CDR-H1 ends at position 34.

[0042] 5 If both H35A and H35B are absent, CDR-H1 ends at position 33; if only H35A is present, CDR-H1 ends at position 34; if both H35A and H35B are present, CDR-H1 ends at position 35.

[0043] According to an embodiment of the present invention, HCDR1, HCDR2, HCDR3, LCDR1, LCDR2 or LCDR3 in the complementary determining region is defined by any one system or a combination of multiple systems of Kabat, Chothia, IMGT, AbM or Contact.

[0044] In some optional embodiments of the present invention, the HCDR1, HCDR2, HCDR3, LCDR1, LCDR2 and LCDR3 are defined by the Kabat system.

[0045] In some optional embodiments of the present invention, the HCDR1, HCDR2, HCDR3, LCDR1, LCDR2 and LCDR3 are defined by the Chothia system.

[0046] In some optional embodiments of the present invention, the HCDR1, HCDR2, HCDR3, LCDR1, LCDR2 and LCDR3 are defined by the IMGT system.

[0047] In some optional embodiments of the present invention, the HCDR1, HCDR2, HCDR3, LCDR1, LCDR2 and LCDR3 are defined by the AbM system.

[0048] In some optional embodiments of the present invention, the HCDR1, HCDR2, HCDR3, LCDR1, LCDR2 and LCDR3 are defined by a Contact system.

[0049] In some optional embodiments of the present invention, the HCDR1, HCDR2, HCDR3, LCDR1, LCDR2 and LCDR3 are defined by a combination of Kabat, Chothia, IMGT, AbM or Contact systems.

[0050] According to an embodiment of the present invention, the Kabat numbering positions corresponding to the amino acid sequences of HCDR1, HCDR2, HCDR3, LCDR1, LCDR2 or LCDR3 defined by the Kabat, Chothia, AbM or IMGT systems are as follows:

[0051] CDR Kabat AbM IMGT Chothia HCDR1 H31~H35 H26~H35 H26~H33 H26~H32 HCDR2 H50~H65 H50~H58 H51~H57 H52~H56 HCDR3 H95~H102 H95~H102 H93~H102 H95~H102 LCDR1 L24~L34 L24~L34 L27~L32 L24~L34 LCDR2 L50~L56 L50~L56 L50~L51 L50~L56 LCDR3 L89~L97 L89~L97 L89~L97 L89~L97

[0052] According to an embodiment of the present invention, the HCDRs and LCDRs are defined by the Kabat system.

[0053] In an optional embodiment, the present invention provides an antibody or a functional fragment thereof, wherein the antibody or the functional fragment thereof comprises the following complementary determining regions:

[0054] HCDR1 comprises or consists of the amino acid sequence shown in SEQ ID NO: 1.

[0055] HCDR2 comprises or consists of the amino acid sequence shown in SEQ ID NO: 2.

[0056] HCDR3 comprises or consists of the amino acid sequence shown in SEQ ID NO: 3 or 31.

[0057] LCDR1 comprises or consists of the amino acid sequence shown in SEQ ID NO: 4 or 32.

[0058] LCDR2 comprises or consists of the amino acid sequence shown in SEQ ID NO:5.

[0059] LCDR3 comprises or consists of the amino acid sequence shown in SEQ ID NO:6.

[0060] In the present invention, the "framework region" or "FR" region includes the heavy chain framework region and the light chain framework region, and refers to the region other than the CDR in the heavy chain variable region and the light chain variable region of the antibody; wherein the heavy chain framework region can be further subdivided into adjacent regions separated by CDR, including HFR1, HFR2, HFR3 and HFR4 framework regions; the light chain framework region can be further subdivided into adjacent regions separated by CDR, including LFR1, LFR2, LFR3 and LFR4 framework regions.

[0061] In the present invention, the heavy chain variable region is obtained by arranging and connecting the following numbered CDRs and FRs in the following combinations: HFR1-HCDR1-HFR2-HCDR2-HFR3-HCDR3-HFR4; the light chain variable region is obtained by arranging and connecting the following numbered CDRs and FRs in the following combinations: LFR1-LCDR1-LFR2-LCDR2-LFR3-LCDR3-LFR4.

[0062] In an optional embodiment, the antibody or a functional fragment thereof further has at least one of HFR1, HFR2, HFR3, HFR4, LFR1, LFR2, LFR3 and LFR4;

[0063] The HFR1 comprises SEQ ID NO:7, or an amino acid sequence having at least 80% identity thereto;

[0064] The HFR2 comprises SEQ ID NO: 8, or an amino acid sequence having at least 80% identity thereto;

[0065] The HFR3 comprises SEQ ID NO: 9, or an amino acid sequence having at least 80% identity thereto;

[0066] The HFR4 comprises SEQ ID NO: 10, or an amino acid sequence having at least 80% identity thereto;

[0067] The LFR1 comprises SEQ ID NO: 11, or an amino acid sequence having at least 80% identity thereto;

[0068] The LFR2 comprises SEQ ID NO: 12, or an amino acid sequence having at least 80% identity thereto;

[0069] The LFR3 comprises SEQ ID NO: 13, or an amino acid sequence having at least 80% identity thereto;

[0070] The LFR4 comprises SEQ ID NO: 14, or an amino acid sequence having at least 80% identity thereto;

[0071] It should be noted that, in other embodiments, the amino acid sequences of the framework regions of the antibodies or functional fragments thereof provided by the present invention may be at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identical to the above-mentioned corresponding framework regions (SEQ ID NO: 7, 8, 9, 10, 11, 12, 13 or 14).

[0072] In an optional embodiment, the HFR1 comprises / is an amino acid sequence as shown in SEQ ID NO:7, 33 or 34.

[0073] In an optional embodiment, the LFR1 comprises / is an amino acid sequence as shown in SEQ ID NO:11 or 35.

[0074] In an optional embodiment, the antibody or its functional fragment has a KD of less than 3.27×10 -7 M binds to sialylated glycan antigen-6 with high affinity.

[0075] In an optional embodiment, the antibody or its functional fragment has a KD≤10 -8 M, KD≤10 -9 M, KD≤10 -10 M, KD≤10 -11 M or KD≤10 -12 M binds to sialylated glycan antigen-6 with high affinity.

[0076] In an optional embodiment, the antibody or its functional fragment has a KD≤5.87×10 -8 M binds to sialylated glycan antigen-6 with high affinity.

[0077] There are many methods for determining antibody affinity (KD), which can be divided into thermodynamic detection methods, kinetic detection methods and dynamic equilibrium detection methods according to the detection principle. Among them, thermodynamic detection methods are commonly used, such as isothermal titration calorimetry (ITC); kinetic detection methods are commonly used, such as surface plasmon resonance (SPR) and biomembrane interferometry (BLI); dynamic equilibrium detection methods are commonly used, such as enzyme-linked immunosorbent assay (ELISA).

[0078] In an alternative embodiment, KD is determined using a kinetic assay; optionally, surface plasmon resonance, for example by using a kinetic assay such as Biosensor system of the system.

[0079] In a second aspect, an embodiment of the present invention provides an antibody or a functional fragment thereof, comprising a heavy chain variable region and / or a light chain variable region, wherein the amino acid sequence of the heavy chain variable region is shown in any one of SEQ ID NOs: 17, 18, 19, and 20, and the amino acid sequence of the light chain variable region is shown in any one of SEQ ID NOs: 21, 22, and 23.

[0080] In an optional embodiment, the antibody or functional fragment thereof described in the first aspect or the second aspect above comprises any combination of the following heavy chain variable regions and light chain variable regions:

[0081] combination Heavy chain variable region Light chain variable region 1 SEQ ID NO:17 SEQ ID NO:21 2 SEQ ID NO:18 SEQ ID NO:21 3 SEQ ID NO:19 SEQ ID NO:21 4 SEQ ID NO:17 SEQ ID NO:22 5 SEQ ID NO:17 SEQ ID NO:23 6 SEQ ID NO:18 SEQ ID NO:23 7 SEQ ID NO:19 SEQ ID NO:23 8 SEQ ID NO:20 SEQ ID NO:21

[0082] In an alternative embodiment, the antibody or a functional fragment thereof further comprises a constant region.

[0083] In an alternative embodiment, the constant region includes a heavy chain constant region and / or a light chain constant region.

[0084] In an optional embodiment, the heavy chain constant region is selected from any one heavy chain constant region of IgG1, IgG2, IgG3, IgG4, IgA, IgM, IgE or IgD, or a combination of multiple heavy chain constant regions, and the light chain constant region is selected from κ or λ type light chain constant regions.

[0085] In an alternative embodiment, the heavy chain constant region includes the CH1 region of IgG, the hinge region of IgG and the CH2-CH3-CH4 region of IgM.

[0086] In an alternative embodiment, the constant region is derived from a species of cow, horse, dairy cow, pig, sheep, rat, mouse, dog, cat, rabbit, donkey, deer, mink, chicken, duck, goose, turkey, fighting cock or human.

[0087] In an alternative embodiment, the species origin of the constant region is mouse.

[0088] In an optional embodiment, the heavy chain constant region sequence (CH) is as shown in SEQ ID NO:15, and the light chain constant region (CL) sequence is as shown in SEQ ID NO:16.

[0089] It should be noted that, in other embodiments, the constant region sequence may have at least 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% identity with the above-mentioned constant region (SEQ ID NO: 15 or 16).

[0090] In an optional embodiment, the functional fragment is selected from any one of F(ab')2, Fab', Fab, Fv and scFv of the antibody.

[0091] The functional fragments of the above antibodies usually have the same binding specificity as the antibodies from which they are derived. It is easy for a person skilled in the art to understand based on the contents described in the present invention that the functional fragments of the above antibodies can be obtained by methods such as enzymatic digestion (including pepsin or papain) and / or by chemical reduction to split disulfide bonds. Based on the structure of the complete antibody disclosed in the present invention, a person skilled in the art can easily obtain the above functional fragments.

[0092] The functional fragments of the above antibodies can also be synthesized by recombinant genetic techniques known to those skilled in the art or by, for example, an automatic peptide synthesizer, such as those sold by Applied BioSystems and the like.

[0093] In a third aspect, the present invention provides an antibody or a functional fragment thereof, comprising a heavy chain and / or a light chain, wherein the amino acid sequence of the heavy chain is shown in any one of SEQ ID NOs: 24, 25, 26, and 27, and the amino acid sequence of the light chain is shown in any one of SEQ ID NOs: 28, 29, and 30.

[0094] In an optional embodiment, the antibody described in the first aspect, the second aspect, and the third aspect comprises any combination of the following heavy chains and light chains:

[0095] combination Heavy chain Light chain 1 SEQ ID NO:24 SEQ ID NO:28 2 SEQ ID NO:25 SEQ ID NO:28 3 SEQ ID NO:26 SEQ ID NO:28 4 SEQ ID NO:24 SEQ ID NO:29 5 SEQ ID NO:24 SEQ ID NO:30 6 SEQ ID NO:25 SEQ ID NO:30 7 SEQ ID NO:26 SEQ ID NO:30 8 SEQ ID NO:27 SEQ ID NO:28

[0096] In a fourth aspect, the present invention provides an antibody conjugate, wherein the antibody conjugate comprises the above-mentioned antibody or a functional fragment thereof.

[0097] In an optional embodiment, the above-mentioned antibody conjugate further comprises biotin or a biotin derivative conjugated to the antibody or a functional fragment thereof.

[0098] In an optional embodiment, the antibody conjugate further comprises a label coupled to the antibody or a functional fragment thereof.

[0099] In an optional embodiment, the above-mentioned marker refers to a class of substances with properties that can be directly observed by the naked eye or detected or detected by an instrument, such as luminescence, color development, radioactivity, etc., through which qualitative or quantitative detection of the corresponding target can be achieved.

[0100] In an alternative embodiment, the label includes but is not limited to fluorescent dyes, enzymes, radioactive isotopes, chemiluminescent agents and nanoparticle labels.

[0101] In actual use, those skilled in the art can select a suitable marker according to the detection conditions or actual needs. No matter which marker is used, it belongs to the protection scope of the present invention.

[0102] In an optional embodiment, the fluorescent dye is not limited to fluorescein dyes and their derivatives (for example, including but not limited to fluorescein isothiocyanate (FITC), hydroxyfluorescein (FAM), tetrachlorofluorescein (TET), etc. or their analogs), rhodamine dyes and their derivatives (for example, including but not limited to red rhodamine (RBITC), tetramethylrhodamine (TAMRA), rhodamine B (TRITC), etc. or their analogs), Cy series dyes and their derivatives (for example, including but not limited to Cy2, Cy3, Cy3B, Cy3.5, Cy3.7, Cy3.8, Cy3.9, Cy3.10, Cy3.11, Cy3.12, Cy3.13, Cy3.14, Cy3.15, Cy3.16, Cy3.17, Cy3.18, Cy3.19, Cy3.20, Cy3.21, Cy3.22, Cy3.23, Cy3.24, Cy3.25, Cy3.26, Cy3.27, Cy3.28, Cy3.29, Cy3.30, Cy3.31, Cy3.32, Cy3.33, Cy3.34, Cy3.35, Cy3.36, Cy3.37, Cy3.38, Cy3.39, Cy3.40, Cy3.41, Cy3.42, Cy3.43, Cy3.44, Cy3.45, Cy3.46, Cy3.47, Cy3.48, Cy3.49, Cy3.50, Cy3.51, Cy3.52, Cy3.53, Cy3.54, Cy3.55, Cy3.56, Cy3.57, Cy3.58, Cy3.59, Cy3.59, Cy3.59, Cy3.59, Cy3.59, Cy3.5 y5, Cy5.5, Cy3, etc. or their analogs), Alexa series dyes and their derivatives (for example, including but not limited to AlexaFluor350, 405, 430, 488, 532, 546, 555, 568, 594, 610, 33, 647, 680, 700, 750, etc. or their analogs) and protein dyes and their derivatives (for example, including but not limited to phycoerythrin (PE), phycocyanin (PC), allophycocyanin (APC), pre-chlorophyll protein (preCP), etc.).

[0103] In alternative embodiments, the enzyme includes, but is not limited to, horseradish peroxidase, alkaline phosphatase, β-galactosidase, glucose oxidase, carbonic anhydrase, acetylcholinesterase, and 6-phosphoglucose deoxygenase.

[0104] In an optional embodiment, the radioactive isotopes include but are not limited to 212Bi, 131I, 111In, 90Y, 186Re, 211At, 125I, 188Re, 153Sm, 213Bi, 32P, 94mTc, 99mTc, 203Pb, 67Ga, 68Ga, 43Sc, 47Sc, 110mIn, 97Ru, 62Cu, 64Cu, 67Cu, 68Cu, 86Y, 88Y, 121Sn, 161Tb, 166Ho, 105Rh, 177Lu, 172Lu and 18F.

[0105] In an optional embodiment, the chemiluminescent reagent includes but is not limited to luminol and its derivatives, lucigenin, crustacean fluorescein and its derivatives, bipyridine ruthenium and its derivatives, acridinium esters and their derivatives, dioxetanes and their derivatives, lophanes and their derivatives, and peroxyoxalates and their derivatives.

[0106] In an optional embodiment, the nanoparticle markers include, but are not limited to, nanoparticles, colloids, organic nanoparticles, magnetic nanoparticles, quantum dot nanoparticles, and rare earth complex nanoparticles.

[0107] In alternative embodiments, the colloid includes, but is not limited to, colloidal metals, disperse dyes, dye-labeled microspheres, and latex.

[0108] In an alternative embodiment, the colloidal metal includes, but is not limited to, colloidal gold, colloidal silver, and colloidal selenium.

[0109] In an optional embodiment, the colloidal metal is colloidal gold.

[0110] In an optional embodiment, the above-mentioned antibody conjugate further comprises a solid phase carrier coupled to the antibody or a functional fragment thereof.

[0111] In an alternative embodiment, the solid support is selected from microspheres, plates and membranes.

[0112] In an optional embodiment, the solid phase carrier includes but is not limited to magnetic microspheres, plastic microspheres, plastic microparticles, microwell plates, glass, capillaries, nylon and nitrocellulose membranes.

[0113] In a fifth aspect, the present invention provides a reagent or a kit, wherein the reagent or the kit comprises the above-mentioned antibody or a functional fragment thereof or the above-mentioned antibody conjugate.

[0114] As mentioned above, the antibodies or functional fragments thereof in some embodiments or examples of the present invention can effectively bind to sialylated sugar chain antigen-6, and therefore, the reagent or kit containing the sialylated sugar chain antigen-6 antibody or its functional fragment can effectively detect sialylated sugar chain antigen-6 qualitatively or quantitatively. The reagent or kit provided by the present invention can be used, for example, for detection involving the specific binding properties of sialylated sugar chain antigen-6 and its antibody, such as immunoblotting and immunoprecipitation. As mentioned above, the antibodies or functional fragments thereof in some embodiments or examples of the present invention have higher binding activity or affinity with sialylated sugar chain antigen-6, and therefore, the reagent or kit containing the antibodies or their functional fragments has higher detection sensitivity or specificity.

[0115] In a sixth aspect, the present invention provides a method for detecting sialylated sugar chain antigen-6, comprising: a) contacting the above-mentioned antibody or its functional fragment, antibody conjugate, reagent or kit with sialylated sugar chain antigen-6 in a sample to be detected under conditions sufficient for an antibody / antigen binding reaction to form an immune complex; and b) detecting the presence of the immune complex, wherein the presence of the complex indicates the presence of the antigen in the test sample;

[0116] In an optional embodiment, the immune complex further comprises a second antibody, which binds to the antibody or a functional fragment thereof.

[0117] In an alternative embodiment, the immune complex further comprises a second antibody, which binds to sialylated sugar chain antigen-6.

[0118] In a seventh aspect, the present invention provides a nucleic acid molecule encoding the above-mentioned antibody or a functional fragment thereof.

[0119] In an eighth aspect, the present invention provides a vector containing the above-mentioned nucleic acid molecule.

[0120] In a ninth aspect, the present invention provides a cell containing the above-mentioned vector.

[0121] In a tenth aspect, the present invention provides a method for preparing an antibody or a functional fragment thereof, comprising: culturing the cell as described above.

[0122] In an eleventh aspect, the present invention provides use of the above-mentioned antibody or its functional fragment, antibody conjugate, or the above-mentioned reagent or kit in detecting sialylated sugar chain antigen-6 or preparing a product for detecting sialylated sugar chain antigen-6.

[0123] Based on the amino acid sequence of the antibody or its functional fragment disclosed in the present invention, those skilled in the art can easily think of using genetic engineering technology or other technologies (chemical synthesis, recombinant expression) to prepare the antibody or its functional fragment, for example, separating and purifying the antibody or its functional fragment from the culture product of a recombinant cell that can recombinantly express the antibody or its functional fragment as described in any of the above items, which is easy to achieve for those skilled in the art. Based on this, no matter what technology is used to prepare the antibody or its functional fragment of the present invention, it belongs to the protection scope of the present invention.

[0124] In order to make the purpose, technical scheme and advantages of the embodiments of the present invention clearer, the technical scheme in the embodiments of the present invention will be described clearly and completely below. If the specific conditions are not specified in the embodiments, they are carried out according to conventional conditions or conditions recommended by the manufacturer. If the manufacturer of the reagents or instruments used is not specified, they are all conventional products that can be purchased commercially.

[0125] Unless otherwise defined, all technical and scientific terms used herein have the same meaning as those generally understood by those of ordinary skill in the art to which the present disclosure belongs. Although any methods and materials similar or equivalent to those described herein can be used for the practice or testing of the preparations or unit doses herein, some methods and materials are now described. Unless otherwise stated, the techniques adopted or considered herein are standard methods. Materials, methods and examples are illustrative and non-restrictive only.

[0126] The practice of the present invention will employ, unless otherwise indicated, conventional techniques of cell biology, molecular biology (including recombinant techniques), microbiology, biochemistry, and immunology, which are within the capabilities of a skilled artisan. This technique is fully explained in the literature, such as Molecular Cloning: A Laboratory Manual, 2nd Edition (Sambrook et al., 1989); Oligonucleotide Synthesis (MJ Gait, ed., 1984); Animal Cell Culture (RI Freshney, ed., 1987); Methods in Enzymology (Academic Press, Inc.); Handbook of Experimental Immunology (DM Weir and CC Blackwell, eds.); Gene Transfer Vectors for Mammalian Cells (JM Miller and MP Calos, eds., 1987); Current Protocols in Molecular Biology (FM Ausubel et al., eds., 1987); PCR: The Polymerase Chain Reaction (PCR: The Polymerase Chain Reaction) (Academic Press, Inc., 1987). Reaction" (Mullis et al., eds., 1994); and Current Protocols in Immunology (JE Coligan et al., eds., 1991), each of which is expressly incorporated herein by reference.

[0127] The features and performance of the present invention are further described in detail below in conjunction with the embodiments.

[0128] Example 1 Preparation of Anti-KL-6 7C9 Monoclonal Antibody

[0129] In this example, restriction endonucleases and Prime Star DNA polymerase were purchased from Takara. MagExtractor-RNA extraction kit was purchased from TOYOBO. BD SMART TM The RACE cDNA Amplification Kit was purchased from Takara. The pMD-18T vector was purchased from Takara. The plasmid extraction kit was purchased from Tiangen. Primer synthesis and gene sequencing were completed by a gene sequencing company. The hybridoma cell line secreting the Anti-KL-6 7C9 monoclonal antibody was an existing hybridoma cell line prepared in this laboratory and revived for use.

[0130] (1) Antibody gene preparation

[0131] mRNA was extracted from the hybridoma cell line secreting Anti-KL-6 7C9 monoclonal antibody, and the DNA product was obtained by RT-PCR. The product was inserted into the pMD-18T vector after A addition reaction with rTaq DNA polymerase and transformed into DH5α competent cells. After the colonies grew, the Heavy Chain and Light Chain gene clones were taken respectively, and 4 clones each were sent to a gene sequencing company for sequencing.

[0132] (2) Sequence analysis of the variable region gene of Anti-KL-6 7C9 antibody

[0133] The gene sequences obtained by the above sequencing were placed in the kabat antibody database for analysis, and the VNTI11.5 software was used for analysis to determine that the genes amplified by the heavy chain and light chain primer pairs were correct. Among the gene fragments amplified by the Light Chain, the VL gene sequence was 333bp, preceded by a 57bp leader peptide sequence; among the gene fragments amplified by the Heavy Chain primer pair, the VH gene sequence was 369bp, belonging to the VH1 gene family, preceded by a 57bp leader peptide sequence.

[0134] (3) Construction of recombinant antibody expression plasmid

[0135] pcDNA TM 3.4 vector is a recombinant antibody eukaryotic expression vector constructed, which has introduced multiple cloning restriction sites such as HindIII, BamHI, and EcoRI, and is named pcDNA3.4A expression vector, hereinafter referred to as 3.4A expression vector; according to the sequencing results of the antibody variable region genes in the above pMD-18T, the VL and VH gene-specific primers of the antibody were designed, with HindIII, EcoRI restriction sites and protective bases at both ends, respectively, and the 0.74kb Light Chain gene fragment and the 1.43kb Heavy Chain gene fragment were amplified by the PCR amplification method.

[0136] The Heavy Chain and Light Chain gene fragments were double-digested with HindIII / EcoRI, and the 3.4A vector was double-digested with HindIII / EcoRI. After the fragments and vectors were purified and recovered, the Heavy Chain gene and the Light Chain gene were respectively connected to the 3.4A expression vector to obtain the recombinant expression plasmids of Heavy Chain and Light Chain, respectively.

[0137] 2. Recombinant Antibody Production

[0138] Resuscitate HEK293 cells in advance and subculture them to 200 ml system to make the cell density reach 3-5×10 6 cells / ml, the cell density reaches the selected antibody concentration and cells, and the cell viability is >95%; the cells are washed by centrifugation and re-dissolved with culture medium, and the cell density is adjusted to 2.9×10 6 Wash the cells with 10% ethanol and 1% ethanol per ml of water, and re-dissolve them with culture medium. At the same time, use the culture medium to prepare plasmid DNA and transfection reagent diluents respectively. Add the transfection reagent diluent to the plasmid DNA diluent, mix well and let it stand at room temperature for 15 minutes; slowly add the mixture to the cell diluent within 1 minute, mix well and take samples to count, record and observe the viability of the cells after transfection, and place them in a 35℃ constant temperature incubator for culture, with a rotation speed of 120rmp and CO 2 The content was 8%, and the sample was collected by centrifugation after 13 days. The supernatant was affinity purified using a protein A affinity chromatography column. 6 μg of the purified antibody was taken for reducing SDS-PAGE, and the electrophoresis diagram is shown in the figure. After reducing SDS-PAGE, two bands were shown, one with Mr of 50KD (heavy chain) and the other with Mr of 28KD (light chain).

[0139] The obtained antibody was named Anti-KL-6 7C9Rmb1. Anti-KL-6 7C9Rmb1 was mutated to obtain a mutant antibody. The sequences of the heavy chain (H) and light chain (L) of the above antibody are shown in the following table:

[0140] Table 2 Antibody sequences

[0141] Antibody Name Heavy chain Light chain Anti-KL-6 7C9Rmb1 SEQ ID NO:24 SEQ ID NO:28 Anti-KL-6 7C9Rmb2 SEQ ID NO:25 SEQ ID NO:28 Anti-KL-6 7C9Rmb3 SEQ ID NO:26 SEQ ID NO:28 Anti-KL-6 7C9Rmb4 SEQ ID NO:24 SEQ ID NO:29 Anti-KL-6 7C9Rmb5 SEQ ID NO:24 SEQ ID NO:30 Anti-KL-6 7C9Rmb6 SEQ ID NO:25 SEQ ID NO:30 Anti-KL-6 7C9Rmb7 SEQ ID NO:26 SEQ ID NO:30 Anti-KL-6 7C9Rmb8 SEQ ID NO:27 SEQ ID NO:28

[0142] Example 2 Performance testing of antibodies

[0143] 1. Affinity Analysis

[0144] The purified antibody was diluted in advance, and the KL-6 recombinant antigen (purchased from Tansheng) was diluted in a gradient manner; the binding and dissociation curves of the antigen and antibody were tested on the Biacore 8K+ device using a CM5 chip that had been pre-coupled with goat anti-mouse IgG. The instrument automatically fitted the affinity constant, binding rate, and dissociation rate. (KD represents the equilibrium dissociation constant, i.e., affinity constant; ka represents the binding rate; kd represents the dissociation rate)

[0145] Table 3 Affinity data

[0146]

[0147]

[0148] 2. Activity identification

[0149] The coating solution (main component NaHCO3) was used to dilute the KL-6 antigen (purchased from Tansheng) to 3ug / ml, 100uL per well, and incubated at 4°C overnight; the next day, the cells were washed twice with the washing solution (main component Na2HPO4+Nacl), and the wells were patted dry; the blocking solution (20% BSA+80% PBS) was added, 120uL per well, incubated at 37°C for 1h, and the wells were patted dry; the purified antibody and control antibody after the diluent were added, 100uL / well, incubated at 37°C for 30min; the cells were washed 5 times, and the wells were patted dry; the goat anti-mouse IgG-HRP was added, 100uL per well, incubated at 37°C for 30min; the cells were washed 5 times, and the wells were patted dry; the color developing solution A (50uL / well) and the color developing solution B (50uL / well) were added, and the wells were 10min; the stop solution was added, 50uL / well; the OD value was read at 450nm (reference 630nm) on the microplate reader.

[0150] Note: Solution A (main ingredients: citric acid + sodium acetate + acetanilide + urea peroxide); Solution B (main ingredients: citric acid + EDTA·2Na + TMB + concentrated HCL); Stop solution (EDTA·2Na + concentrated H2SO4)

[0151] Table 4 Activity data

[0152] Concentration (ng / ml) 31.25 15.63 7.81 3.91 1.95 0.00 Control 0.877 0.514 0.281 0.157 0.081 0.012 Anti-KL-6 7C9Rmb1 1.445 1.098 0.689 0.382 0.229 0.024 Anti-KL-6 7C9Rmb2 1.435 1.003 0.604 0.369 0.196 0.029 Anti-KL-6 7C9Rmb3 1.624 1.237 0.838 0.516 0.287 0.052 Anti-KL-6 7C9Rmb4 0.949 0.629 0.380 0.209 0.127 0.072 Anti-KL-6 7C9Rmb5 1.504 1.122 0.709 0.430 0.263 0.071 Anti-KL-6 7C9Rmb6 1.662 1.317 0.824 0.339 0.283 0.076 Anti-KL-6 7C9Rmb7 1.759 1.303 0.861 0.531 0.307 0.092 Anti-KL-6 7C9Rmb8 1.703 1.298 0.806 0.499 0.297 0.048

[0153] 3. Stability assessment

[0154] The above antibodies were placed at 4°C (refrigerator), -80°C (refrigerator), and 37°C (constant temperature box) for 21 days, and samples were taken for 7 days, 14 days, and 21 days for status observation, and the activity of the 21-day samples was tested. The results showed that there was no obvious protein state change in the antibodies under the three test conditions for 21 days, and the activity did not show a downward trend with the increase of the test temperature, indicating that the above antibodies are stable. Table 5 below shows the OD results of the enzyme immunoassay activity test of the antibody Anti-KL-6 7C9Rmb5 for 21 days.

[0155] Table 5 Stability data

[0156]

[0157]

[0158] The above description is only a preferred embodiment of the present invention and is not intended to limit the present invention. For those skilled in the art, the present invention may have various modifications and variations. Any modification, equivalent replacement, improvement, etc. made within the spirit and principle of the present invention shall be included in the protection scope of the present invention.

[0159] Some of the amino acid sequences involved in this application are shown in Table 6:

[0160] Table 6 Summary of amino acid sequences

[0161]

[0162]

[0163]

Claims

1. An antibody or a functional fragment thereof, characterized in that: The antibody or its functional fragment comprises three complementary determining regions of a heavy chain variable region having an amino acid sequence of any one of SEQ ID NOs: 17, 18, 19, and 20 and three complementary determining regions of a light chain variable region having an amino acid sequence of any one of SEQ ID NOs: 21, 22, and 23.

2. The antibody or functional fragment thereof according to claim 1, characterized in that: The HCDR1, HCDR2, HCDR3, LCDR1, LCDR2 or LCDR3 in the complementary determining region is defined by any one system or a combination of multiple systems of Kabat, Chothia, IMGT, AbM or Contact.

3. An antibody or a functional fragment thereof, characterized in that: The antibody or its functional fragment comprises the following complementarity determining region: HCDR1, which comprises or consists of the amino acid sequence shown in SEQ ID NO: 1; HCDR2, which comprises or consists of the amino acid sequence shown in SEQ ID NO: 2; HCDR3 comprising or consisting of the amino acid sequence shown in SEQ ID NO: 3 or 31; LCDR1, which comprises or consists of the amino acid sequence shown in SEQ ID NO: 4 or 32; LCDR2, which comprises or consists of the amino acid sequence shown in SEQ ID NO:5; LCDR3, which comprises or consists of the amino acid sequence shown in SEQ ID NO:6; Optionally, the antibody or its functional fragment further has at least one of HFR1, HFR2, HFR3, HFR4, LFR1, LFR2, LFR3 and LFR4; The HFR1 comprises SEQ ID NO:7, or an amino acid sequence having at least 80% identity thereto; The HFR2 comprises SEQ ID NO: 8, or an amino acid sequence having at least 80% identity thereto; The HFR3 comprises SEQ ID NO: 9, or an amino acid sequence having at least 80% identity thereto; The HFR4 comprises SEQ ID NO: 10, or an amino acid sequence having at least 80% identity thereto; The LFR1 comprises SEQ ID NO: 11, or an amino acid sequence having at least 80% identity thereto; The LFR2 comprises SEQ ID NO: 12, or an amino acid sequence having at least 80% identity thereto; The LFR3 comprises SEQ ID NO: 13, or an amino acid sequence having at least 80% identity thereto; The LFR4 comprises SEQ ID NO: 14, or an amino acid sequence having at least 80% identity thereto; Optionally, the antibody or its functional fragment has a KD of less than 3.27×10 -7 M binds to sialylated glycan antigen-6 with high affinity.

4. An antibody or a functional fragment thereof, comprising a heavy chain variable region and / or a light chain variable region, characterized in that: The amino acid sequence of the heavy chain variable region is shown in any one of SEQ ID NOs: 17, 18, 19, and 20; the amino acid sequence of the light chain variable region is shown in any one of SEQ ID NOs: 21, 22, and 23.

5. The antibody or functional fragment thereof according to any one of claims 1 to 4, wherein the combination of the heavy chain variable region and the light chain variable region is selected from any one of the following combinations:

6. The antibody or functional fragment thereof according to any one of claims 1 to 4, characterized in that: The antibody or its functional fragment further comprises a constant region; Optionally, the constant region includes a heavy chain constant region and / or a light chain constant region; Optionally, the heavy chain constant region is selected from any one heavy chain constant region of IgG1, IgG2, IgG3, IgG4, IgA, IgM, IgE or IgD, or a combination of multiple heavy chain constant regions; the light chain constant region is selected from a κ type or a λ type light chain constant region; Optionally, the heavy chain constant region includes the CH1 region of IgG, the hinge region of IgG and the CH2-CH3-CH4 region of IgM; Optionally, the species of the constant region is cattle, horse, pig, sheep, goat, rat, mouse, dog, cat, rabbit, donkey, deer, mink, chicken, duck, goose or human; Optionally, the species origin of the constant region is mouse; Optionally, the heavy chain constant region sequence is as shown in SEQ ID NO: 15 or has at least 80% identity thereto; Optionally, the light chain constant region sequence is as shown in SEQ ID NO: 16 or has at least 80% identity thereto; Optionally, the functional fragment is selected from any one of F(ab')2, Fab', Fab, Fv and scFv of the antibody.

7. An antibody or a functional fragment thereof, comprising a heavy chain and / or a light chain, characterized in that: The amino acid sequence of the heavy chain is shown in any one of SEQ ID NOs: 24, 25, 26, and 27; the amino acid sequence of the light chain is shown in any one of SEQ ID NOs: 28, 29, and 30.

8. An antibody conjugate, characterized in that: The antibody conjugate comprises the antibody or a functional fragment thereof according to any one of claims 1 to 7; Optionally, the antibody conjugate further comprises biotin or a biotin derivative coupled to the antibody or a functional fragment thereof; Optionally, the antibody conjugate further comprises a label coupled to the antibody or a functional fragment thereof; Optionally, the label is selected from fluorescent dyes, enzymes, radioisotopes, chemiluminescent agents and nanoparticle labels; Optionally, the antibody conjugate further comprises a solid phase carrier coupled to the antibody or a functional fragment thereof; Optionally, the solid support is selected from microspheres, plates and membranes.

9. A reagent or a kit, characterized in that: The reagent or kit comprises the antibody or functional fragment thereof according to any one of claims 1 to 7 or the antibody conjugate according to claim 8.

10. A method for detecting sialylated sugar chain antigen-6, characterized in that: include: a) contacting the antibody or functional fragment thereof according to any one of claims 1 to 7, the antibody conjugate according to claim 8, or the reagent or kit according to claim 9 with sialylated sugar chain antigen-6 in a sample to be detected under conditions sufficient for an antibody / antigen binding reaction to form an immune complex; and b) detecting the presence of the immune complex, the presence of the complex indicating the presence of the antigen in the test sample; Optionally, the immune complex further comprises a second antibody, which binds to the antibody or a functional fragment thereof; Optionally, the immune complex further comprises a second antibody, which binds to sialylated sugar chain antigen-6.

11. A nucleic acid, characterized in that It encodes the antibody or its functional fragment according to any one of claims 1 to 7.

12. A carrier, characterized in that It contains the nucleic acid according to claim 11.

13. A cell, characterized in that It contains the nucleic acid according to claim 11 or the vector according to claim 12.

14. A method for preparing the antibody or functional fragment thereof according to any one of claims 1 to 7, characterized in that: It includes: Cultivate the cell of claim 13.

15. Use of the antibody or functional fragment thereof according to any one of claims 1 to 7, the antibody conjugate according to claim 8, or the reagent or kit according to claim 9 in detecting or preparing a product for detecting sialylated sugar chain antigen-6.

Images