A method for quantitative analysis of living cell FRET two-hybrid

CN122405795APending Publication Date: 2026-07-17SOUTH CHINA NORMAL UNIV
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Patent Information

Authority / Receiving Office
CN · China
Patent Type
Applications(China)
Current Assignee / Owner
SOUTH CHINA NORMAL UNIV
Filing Date
2026-01-21
Publication Date
2026-07-17

AI Technical Summary

Technical Problem

Existing FRET two-hybrid quantitative analysis methods are difficult to accurately characterize binding heterogeneity in complex biological systems, leading to underfitting and parameter inversion bias. This is especially true in low-concentration regions where the signal-to-noise ratio is high and the error proportion is large. The nonlinear fitting process is unstable, making it difficult to achieve accurate characterization of the binding mechanism.

Method used

The Langmuir-Freundlich model is introduced and combined with weighted least squares and regularization penalty terms. The heterogeneity index n is used to characterize the difference in energy distribution of binding sites. The non-uniform binding quantitative relationship between the corrected FRET energy transfer efficiency and the concentration of free molecules is established. A robust inversion strategy is adopted to suppress the non-uniform distribution of errors and parameter coupling.

Benefits of technology

It improves the quantitative modeling capability for heterogeneous binding systems, realizes the quantitative characterization of binding heterogeneity, outputs quantifiable heterogeneity indices, solves the ill-conditioned problem of the fitting process, and improves the reliability of parameter inversion and the repeatability of results.

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Abstract

本发明公开了一种活细胞FRET双杂交定量分析方法,包括步骤:构建供体‑受体荧光融合蛋白表达载体并建立表达体系,完成细胞培养与共转染;采用供体单独表达样本、受体单独表达样本确定检测系统的光谱串扰参数,采用供体与受体共表达样本获得校正参数、碰撞FRET系数;在荧光显微镜下采集样本的三通道荧光强度数据,通过串扰校正、碰撞校正和自由浓度反演,得到每个细胞对应的实验观测数据集,基于Langmuir‑Freundlich模型进行迭代求解。本发明能够适配复杂生物体系、并可对结合异质性进行定量表征,同时能够提高非线性拟合过程的稳定性与参数反演的可靠性,以满足对真实分子相互作用过程的精准表征需求。
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