Anti-CD3 antibodies and uses thereof
CD3-binding antibodies with specific variable domains address the limitations of current treatments by effectively depleting T cells, providing a safer and more effective therapy for autoimmune diseases and cancers.
Patent Information
- Application Number
- JP2022564276
- Authority / Receiving Office
- JP · JP
- Patent Type
- Patents
- Current Assignee / Owner
- Priority Date
- 2020-04-24
- Filing Date
- 2021-04-23
- Publication Date
- 2025-12-24
- Estimated Expiration
- 2041-04-23
AI Technical Summary
Current treatments for autoimmune diseases and graft-versus-host disease are inadequate, particularly corticosteroids, which have adverse side effects and limited efficacy, and there is a need for more effective and safer alternatives.
Development of CD3-binding antibodies with specific heavy and light chain variable domains, including CDR sequences, and antigen-binding fragments, which can be used to target CD3-expressing cells, potentially reducing immune response and treating autoimmune diseases and cancers.
The CD3-binding antibodies effectively deplete T cells, offering a safer and more effective treatment for autoimmune diseases and cancers by specifically targeting CD3-expressing cells, reducing reliance on corticosteroids and minimizing systemic immune suppression.
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Abstract
Description
[Technical Field]
[0001] CROSS-REFERENCE TO RELATED APPLICATIONS This application claims the benefit of and priority to U.S. Provisional Patent Application No. 63 / 015,149, filed April 24, 2020, the entire contents of which are incorporated herein by reference. The present technology relates generally to the preparation of immunoglobulin-related compositions (e.g., antibodies or antigen-binding fragments thereof) that specifically bind CD3 protein and their uses. In particular, the present technology relates to the preparation of CD3-binding antibodies and their use in the detection and treatment of cancer or CD3-associated conditions. [Background technology]
[0002] The following description of the background of the present technology is provided merely as an aid in understanding the present technology and is not admitted to describe or constitute prior art to the present technology. Autoimmunity occurs when a patient's immune system reacts against its own normal tissues. In humans, autoimmune diseases generally involve both B cells and T cells. T cells play an important role in various autoimmune diseases, including those mediated primarily by autoimmune antibodies or immune complexes, although there are also diseases that are primarily T cell-mediated, including sympathetic ophthalmia, multiple sclerosis, and type 1 diabetes. Treatment of autoimmune diseases is primarily based on immunosuppression using corticosteroids or T cell activation pathway antagonists. Arevalo et al., Middle East Afr J Ophthalmol 19(1): 13-21 (2012); Galea et al., BMJ 350: h1765 (2015). Allergen-directed hematopoietic cell transplantation (AHCT) is a powerful treatment for several types of diseases, including leukemia, immunodeficiency, metabolic deficiency, and hemochromatosis. Hatzimichael and Tuthill, Stem Cells Cloning 3: 105-117 (2010). One major complication of AHCT is graft-versus-host disease, which occurs in 35-50% of patients. Jacobsohn and Vogelsang, Orphanet J Rare Dis 2: 35 (2007). Most treatment options are based on immunosuppression, and corticosteroids are the mainstay treatment modality for the treatment of grade II and higher acute GVHD. Nevertheless, corticosteroids have several adverse metabolic systemic effects, such as weakening the entire immune system, including innate and adaptive immunity, and increasing the risk of opportunistic infections (Jacobsohn and Vogelsang, supra (2007), Hatzimichael and Tuthill, supra (2010)). Furthermore, some patients are resistant to corticosteroid treatment. Unfortunately, the survival rate for patients with grade IV GVHD is only 5%, and therefore, there is a need to develop more effective and safer treatment options for these patients (Cahn et al., Blood 106(4): 1495-1500 (2005)). Summary of the Invention
[0003] In one aspect, the present disclosure provides a heavy chain immunoglobulin variable domain (V H ) and light chain immunoglobulin variable domain (V L ), including (a) V H is the V of GYTFTRYT (SEQ ID NO: 2) H - CDR1 sequence, V of INPSRGYT (SEQ ID NO: 3) H - a CDR2 sequence and a V of ARYYDDHYSLDY (SEQ ID NO: 6), ARYYDDHYSCDY (SEQ ID NO: 134), ARYYDDHCSLDY (SEQ ID NO: 135), or ARYYDDHYSLCY (SEQ ID NO: 136) H and / or (b) V Lis the V of SSVSY (SEQ ID NO: 12) L - CDR1 sequence, V of DT (SEQ ID NO: 13) L -CDR2 sequence, and V of QQWSSNPFT (SEQ ID NO: 14) L - an antibody or antigen-binding fragment thereof comprising the CDR3 sequence. In one aspect, the present disclosure provides a heavy chain immunoglobulin variable domain (V H ) and light chain immunoglobulin variable domain (V L ), including (a) V H comprises an amino acid sequence selected from any one of SEQ ID NOs: 5, 7, 8, 9, 10, or 43-61, and / or (b) V L provides an antibody or antigen-binding fragment thereof, comprising an amino acid sequence selected from any one of SEQ ID NOs: 15 to 20 or 62 to 91.
[0004] In any of the above embodiments, the antibody may further comprise an Fc domain of an isotype selected from the group consisting of IgG1, IgG2, IgG3, IgG4, IgA1, IgA2, IgM, IgD, and IgE. In some embodiments, the antibody comprises an IgG1 constant region comprising one or more amino acid substitutions selected from the group consisting of N297A and K322A. Additionally, or alternatively, in some embodiments, the antibody comprises an IgG4 constant region comprising an S228P mutation. In certain embodiments, the antigen-binding fragment is selected from the group consisting of Fab, F(ab'), Fab', scF v , and F v In some embodiments, the antibody is a monoclonal antibody, a chimeric antibody, a humanized antibody, a bispecific antibody, or a multispecific antibody. In certain embodiments, the antibody or antigen-binding fragment binds to the extracellular domain of a CD3 polypeptide. In certain embodiments, the extracellular domain comprises a CD3ε subunit comprising a linear stretch of sequence on the FG loop. In some embodiments, the CD3ε subunit may comprise three discontinuous regions: residues 79ε to 85ε (FG loop), residue 34ε (the first residue of the βC strand), and residues 46ε and 48ε (C'-D loop).
[0005] In another aspect, the disclosure provides an antibody comprising a heavy chain (HC) amino acid sequence comprising SEQ ID NO:23, SEQ ID NO:96, SEQ ID NO:100, SEQ ID NO:104, SEQ ID NO:108, SEQ ID NO:112, SEQ ID NO:116, SEQ ID NO:126, SEQ ID NO:132, SEQ ID NO:137, SEQ ID NO:139, or a variant thereof with one or more conservative amino acid substitutions, and / or a light chain (LC) amino acid sequence comprising SEQ ID NO:21, SEQ ID NO:92, SEQ ID NO:94, SEQ ID NO:98, SEQ ID NO:102, SEQ ID NO:106, SEQ ID NO:110, SEQ ID NO:114, SEQ ID NO:122, SEQ ID NO:124, SEQ ID NO:128, SEQ ID NO:130, or a variant thereof with one or more conservative amino acid substitutions. In some embodiments, the antibody comprises an HC amino acid sequence and an LC amino acid sequence selected from the group consisting of SEQ ID NO:23 and SEQ ID NO:21, SEQ ID NO:23 and SEQ ID NO:92, SEQ ID NO:96 and SEQ ID NO:94, SEQ ID NO:100 and SEQ ID NO:98, SEQ ID NO:104 and SEQ ID NO:102, SEQ ID NO:108 and SEQ ID NO:106, SEQ ID NO:112 and SEQ ID NO:110, and SEQ ID NO:116 and SEQ ID NO: 114. Additionally, or alternatively, in some embodiments, the antibody comprises a first LC amino acid sequence, a second LC amino acid sequence, a first HC amino acid sequence, and a second HC amino acid sequence selected from the group consisting of SEQ ID NO:122, SEQ ID NO:124, SEQ ID NO:126, and SEQ ID NO:137, and SEQ ID NO:128, SEQ ID NO:130, SEQ ID NO:132, and SEQ ID NO:139, respectively. In one aspect, the disclosure provides an antibody comprising: (a) a light chain immunoglobulin variable domain sequence that is at least 80%, at least 85%, at least 90%, at least 95%, or at least 99% identical to the light chain immunoglobulin variable domain sequence of any one of SEQ ID NOs: 15-20, or 62-91; and / or (b) a heavy chain immunoglobulin variable domain sequence that is at least 80%, at least 85%, at least 90%, at least 95%, or at least 99% identical to the heavy chain immunoglobulin variable domain sequence of any one of SEQ ID NOs: 5, 7, 8, 9, 10, or 43-61.
[0006] In another aspect, the disclosure provides an antibody comprising (a) an LC sequence that is at least 80%, at least 85%, at least 90%, at least 95%, or at least 99% identical to the LC sequence present in SEQ ID NO:21, SEQ ID NO:92, SEQ ID NO:94, SEQ ID NO:98, SEQ ID NO:102, SEQ ID NO:106, SEQ ID NO:110, SEQ ID NO:114, SEQ ID NO:122, SEQ ID NO:124, SEQ ID NO:128, or SEQ ID NO:130, and / or (b) an HC sequence that is at least 80%, at least 85%, at least 90%, at least 95%, or at least 99% identical to the HC sequence present in SEQ ID NO:23, SEQ ID NO:96, SEQ ID NO:100, SEQ ID NO:104, SEQ ID NO:108, SEQ ID NO:112, SEQ ID NO:116, SEQ ID NO:126, SEQ ID NO:132, SEQ ID NO:137, or SEQ ID NO:139.
[0007] In any of the above embodiments, the antibody is a monoclonal antibody, a chimeric antibody, a humanized antibody, a bispecific antibody, or a multispecific antibody. Additionally or alternatively, in some embodiments, the antibody comprises an IgG1 constant region comprising one or more amino acid substitutions selected from the group consisting of N297A and K322A. In certain embodiments, the antibody of the present technology comprises an IgG4 constant region comprising a S228P mutation. In any of the above embodiments, the antibody binds to the extracellular domain of a CD3 polypeptide. In certain embodiments, the extracellular domain comprises a CD3ε subunit comprising a linear stretch of the sequence on the F-G loop. In some embodiments, the CD3ε subunit may comprise three discontinuous regions: residues 79ε to 85ε (F-G loop), residue 34ε (the first residue of the βC strand), and residues 46ε and 48ε (C'-D loop). Additionally or alternatively, in some embodiments, the antibodies of the present technology lack α-1,6-fucose modifications.
[0008] In one aspect, the present disclosure provides a multispecific antigen-binding fragment comprising a first peptide chain, the first peptide chain comprising, from N-terminal to C-terminal: (i) a heavy chain variable domain of a first immunoglobulin capable of specifically binding to a first epitope, (ii) a flexible peptide linker comprising the amino acid sequence (GGGGS)6, (iii) a light chain variable domain of the first immunoglobulin, (iv) a flexible peptide linker comprising the amino acid sequence (GGGGS)4, (v) a heavy chain variable domain of a second immunoglobulin capable of specifically binding to a second epitope, (vi) a flexible peptide linker comprising the amino acid sequence (GGGGS)6, and (vi (viii) a flexible peptide linker sequence comprising the amino acid sequence TPLGDTTHT; and (ix) a self-assembly degradation (SADA) polypeptide, wherein the heavy chain variable domain of the first immunoglobulin or the heavy chain variable domain of the second immunoglobulin is selected from any one of SEQ ID NOs: 5, 7, 8, 9, 10, or 43 to 61, and / or the light chain variable domain of the first immunoglobulin or the light chain variable domain of the second immunoglobulin is selected from any one of SEQ ID NOs: 15 to 20, or 62 to 91.
[0009] In another aspect, the present disclosure provides a multispecific antigen-binding fragment comprising a first peptide chain, the first peptide chain comprising, from N-terminal to C-terminal: (i) a light chain variable domain of a first immunoglobulin capable of specifically binding to a first epitope, (ii) a flexible peptide linker comprising the amino acid sequence (GGGGS)6, (iii) a heavy chain variable domain of the first immunoglobulin, (iv) a flexible peptide linker comprising the amino acid sequence (GGGGS)4, (v) a heavy chain variable domain of a second immunoglobulin capable of specifically binding to a second epitope, (vi) a flexible peptide linker comprising the amino acid sequence (GGGGS)6, and (v (ii) a light chain variable domain of the second immunoglobulin; (viii) a flexible peptide linker sequence comprising the amino acid sequence TPLGDTTHT; and (ix) a self-assembly degradation (SADA) polypeptide, wherein the heavy chain variable domain of the first immunoglobulin or the heavy chain variable domain of the second immunoglobulin is selected from any one of SEQ ID NOs: 5, 7, 8, 9, 10, or 43 to 61, and / or the light chain variable domain of the first immunoglobulin or the light chain variable domain of the second immunoglobulin is selected from any one of SEQ ID NOs: 15 to 20, or 62 to 91.
[0010] In certain embodiments of the multispecific antigen-binding fragments disclosed herein, the SADA polypeptide comprises a tetramerization, pentamerization, or hexamerization domain, hi some embodiments, the SADA polypeptide comprises the tetramerization domain of any one of p53, p63, p73, hnRNPC, SNA-23, Stefin B, KCNQ4, or CBFA2T1.
[0011] In one aspect, the disclosure provides a multispecific antibody comprising a first polypeptide chain, a second polypeptide chain, a third polypeptide chain, and a fourth polypeptide chain, wherein the first polypeptide chain and the second polypeptide chain are covalently linked to each other, the second polypeptide chain and the third polypeptide chain are covalently linked to each other, and the third polypeptide chain and the fourth polypeptide chain are covalently linked to each other, and wherein (a) the first polypeptide chain and the fourth polypeptide chain each have an N-terminus From the C-terminus to the C-terminus: (i) a light chain variable domain of a first immunoglobulin capable of specifically binding to a first epitope; (ii) a light chain constant domain of the first immunoglobulin; (iii) a flexible peptide linker comprising the amino acid sequence (GGGGS)3; and (iv) a light chain variable domain of the second immunoglobulin linked to a complementary heavy chain variable domain of the second immunoglobulin, or a heavy chain variable domain of the second immunoglobulin linked to a complementary light chain variable domain of the second immunoglobulin. and (b) a light chain variable domain or a heavy chain variable domain of a second immunoglobulin capable of specifically binding to a second epitope, the light chain variable domain and the heavy chain variable domain of the second immunoglobulin being linked together via a flexible peptide linker comprising the amino acid sequence (GGGGS)6 to form a single-chain variable fragment; and (c) the second polypeptide chain and the third polypeptide chain each comprise, from N-terminal to C-terminal: (i) a light chain variable domain of the first immunoglobulin capable of specifically binding to the first epitope, and and (ii) a heavy chain variable domain of the first immunoglobulin, wherein the heavy chain variable domain of the first immunoglobulin or the heavy chain constant domain of the second immunoglobulin is selected from any one of SEQ ID NOs: 5, 7, 8, 9, 10, or 43 to 61, and / or the light chain variable domain of the first immunoglobulin or the light chain variable domain of the second immunoglobulin is selected from any one of SEQ ID NOs: 15 to 20, or 62 to 91.
[0012] In one aspect, the disclosure provides a recombinant nucleic acid sequence encoding any of the antibodies or antigen-binding fragments described herein. In some embodiments, the recombinant nucleic acid sequence is selected from the group consisting of SEQ ID NOs: 22, 24, 93, 95, 97, 99, 101, 103, 105, 107, 109, 111, 113, 115, 117, 123, 125, 127, 129, 131, 133, 138, and 140. In another aspect, the present disclosure provides a host cell or vector comprising any of the recombinant nucleic acid sequences disclosed herein. In one aspect, the present disclosure provides a composition comprising an antibody or antigen-binding fragment of the present technology and a pharmaceutically acceptable carrier, wherein the antibody or antigen-binding fragment is optionally conjugated to an agent selected from the group consisting of an isotope, dye, chromagen, imaging agent, drug, toxin, cytokine, enzyme, enzyme inhibitor, hormone, hormone antagonist, growth factor, radionuclide, metal, liposome, nanoparticle, RNA, DNA, or any combination thereof.
[0013] Additionally, or alternatively, in some embodiments, the multispecific antibodies or antigen-binding fragments thereof of the present technology bind to T cells, B cells, myeloid cells, plasma cells, or mast cells. Additionally, or alternatively, in some embodiments, the multispecific antibodies or antigen-binding fragments thereof bind to CD3, GPA33, HER2 / neu, GD2, MAGE-1, MAGE-3, BAGE, GAGE-1, GAGE-2, MUM-1, CDK4, N-acetylglucosamine transferase, p15, gp75, beta-catenin, ErbB2, cancer antigen 125 (CA-125), carcinoembryonic antigen (CEA), RAGE, MART (melanoma antigen), MUC-1, MUC-2, MUC-3, MUC-4, MUC-5ac, MUC-16, MUC-17, tyrosinase, Pmel 17 (gp100), GnT-V intron V sequence (N-acetylglucosamine transferase V intron V sequence), prostate cancer psm, PRAME (melanoma antigen), β-catenin, EBNA (Epstein-Barr virus nuclear antigen) 1-6, LMP2, p53, lung resistance protein (LRP), Bcl-2, prostate-specific antigen (PSA), Ki-67, CEACAM6, colon-specific antigen-p (CSA p), HLA-DR, CD40, CD74, CD138, EGFR, EGP-1, EGP-2, VEGF, PlGF, insulin-like growth factor (ILGF), tenascin, platelet-derived growth factor, IL-6, CD20, CD19, PSMA, CD33, CD123, MET, DLL4, Ang-2, HER3, IGF-1R, CD30, TAG-72, SPEAP, CD45, L1-CAM, Lewis Y (Le y) antigens, E-cadherin, V-cadherin, GPC3, EpCAM, CD4, CD8, CD21, CD23, CD46, CD80, HLA-DR, CD74, CD22, CD14, CD15, CD16, CD123, TCR gamma / delta, NKp46, KIR, CD56, DLL3, PD-1, PD-L1, CD28, CD137, CD99, globo H, CD24, STEAP1, B7H3, polysialic acid, OX40, OX40-ligand, peptide-MHC complexes (with peptides derived from TP53, KRAS, MYC, EBNA1-6, PRAME, MART, tyrosinase, MAGEA1-A6, pmel17, LMP2, or WT1), or small molecule DOTA haptens.The small molecule DOTA hapten can be selected from the group consisting of DOTA, DOTA-Bn, DOTA-desferrioxamine, DOTA-Phe-Lys(HSG)-D-Tyr-Lys(HSG)-NH2, Ac-Lys(HSG)D-Tyr-Lys(HSG)-Lys(Tscg-Cys)-NH2, DOTA-D-Asp-D-Lys(HSG)-D-Asp-D-Lys(HSG)-NH2; DOTA-D-Glu-D-Lys(HSG)-D-Glu-D-Lys(HSG)-NH2, DOTA-D-Tyr-D-Lys(HSG)-D-Glu-D-Lys(HSG)-NH2, DOTA-D-Ala-D-Lys(HSG)-D-Glu-D-Lys(HSG)-NH2, DOTA-D-Phe-D-Lys(HSG)-D-Tyr-D-Lys(HSG)-NH2, Ac-D-Phe-D-Lys(DOTA)-D-Tyr-D-Lys(DOTA)-NH2, Ac-D-Phe-D-Lys(DTPA)-D-Tyr-D-Lys(DTPA)-NH2, Ac-D-Phe-D-Lys(Bz-DTPA)-D-Tyr-D-Lys(Bz-DTPA)-NH2, Ac-D-Lys(HSG)-D-Tyr-D-Lys(HSG)-D-Lys(Tscg-Cys)-NH2, DOTA-D-Phe-D-Lys(HSG)-D-Tyr-D-Lys(HSG)-D-Lys(Tscg-Cys)-NH2, (Tscg-Cys)-D-Phe-D-Lys(HSG)-D-Tyr-D-Lys(HSG)-D-Lys(DOTA)-NH2, Tscg-D-Cys-D-Glu-D-Lys(HSG)-D-Glu-D-Lys(HSG)-NH2, (Tscg-Cys)-D-Glu-D-Lys(HSG)-D-Glu-D-Lys(HSG)-NH2, Ac-D-Cys-D-Lys(DOTA)-D-Tyr-D-Ala-D-Lys(DOTA)-D-Cys-NH2, Ac-D-Cys-D-Lys(DTPA)-D-Tyr-D-Lys(DTPA)-NH2, Ac-D-Lys(DTPA)-D-Tyr-D-Lys(DTPA)-D-Lys(Tscg-Cys)-NH2, and Ac-D-Lys(DOTA)-D-Tyr-D-Lys(DOTA)-D-Lys(Tscg-Cys)-NH2.
[0014] In another aspect, the present disclosure provides a method of treating a CD3-associated autoimmune disease in a subject in need thereof, comprising administering to the subject an effective amount of an antibody that specifically binds to CD3, comprising an HC amino acid sequence and an LC amino acid sequence selected from the group consisting of SEQ ID NO:23 and SEQ ID NO:21, SEQ ID NO:23 and SEQ ID NO:92, SEQ ID NO:96 and SEQ ID NO:94, SEQ ID NO:100 and SEQ ID NO:98, SEQ ID NO:104 and SEQ ID NO:102, SEQ ID NO:108 and SEQ ID NO:106, SEQ ID NO:112 and SEQ ID NO:110, and SEQ ID NO:116 and SEQ ID NO:114. Examples of CD3-associated autoimmune diseases include, but are not limited to, multiple sclerosis (MS), rheumatoid arthritis (RA), systemic lupus erythematosus, celiac disease, sympathetic ophthalmia, type 1 diabetes, and graft-versus-host disease.
[0015] In yet another aspect, the disclosure provides a method of treating cancer in a subject in need thereof, comprising administering to the subject an effective amount of an antibody that specifically binds to CD3, wherein the antibody comprises an HC amino acid sequence and an LC amino acid sequence selected from the group consisting of SEQ ID NO:23 and SEQ ID NO:21, SEQ ID NO:23 and SEQ ID NO:92, SEQ ID NO:96 and SEQ ID NO:94, SEQ ID NO:100 and SEQ ID NO:98, SEQ ID NO:104 and SEQ ID NO:102, SEQ ID NO:108 and SEQ ID NO:106, SEQ ID NO:112 and SEQ ID NO:110, and SEQ ID NO:116 and SEQ ID NO:114, respectively. Examples of cancer include, but are not limited to, precursor T acute lymphocytic leukemia / lymphoma, anaplastic large cell lymphoma, lymphomatoid papulosis type A, mycosis fungoides, Pagetoid reticulosis, granulomatous lax skin, Sezary syndrome, adult T-cell leukemia / lymphoma, cutaneous large T-cell lymphoma, pleomorphic T-cell lymphoma, lymphomatoid papulosis type B, secondary cutaneous CD30+ large cell lymphoma, hepatosplenic T-cell lymphoma, angioimmunoblastic T-cell lymphoma, enteropathy-associated T-cell lymphoma, peripheral T-cell lymphoma not otherwise specified, subcutaneous T-cell lymphoma, large granular lymphocytic leukemia, and acute mixed leukemia. Other examples of cancer include, but are not limited to, adrenal gland cancer, bladder cancer, blood cancer, bone cancer, brain cancer, breast cancer, cell carcinoma, cervical cancer, colon cancer, colorectal cancer, uterine cancer, ear, nose and throat (ENT) cancer, endometrial cancer, esophageal cancer, gastrointestinal cancer, head and neck cancer, Hodgkin's disease, intestinal cancer, kidney cancer, pharyngeal cancer, acute and chronic leukemia, liver cancer, lymph node cancer, lymphoma, lung cancer, melanoma, mesothelioma, myeloma, nasopharyngeal cancer, neuroblastoma, non-Hodgkin's lymphoma, oral cancer, ovarian cancer, pancreatic cancer, penile cancer, pharyngeal cancer, prostate cancer, rectal cancer, sarcoma, seminoma, skin cancer, stomach cancer, teratoma, testicular cancer, thyroid cancer, uterine cancer, vaginal cancer, vascular tumors, and metastases thereof.
[0016] Additionally, or alternatively, in some embodiments of the above methods, the antibody or antigen-binding fragment is administered to the subject separately, sequentially, or simultaneously with an additional therapeutic agent. Examples of additional therapeutic agents include one or more of alkylating agents, platinum agents, taxanes, vinca agents, antiestrogens, aromatase inhibitors, ovarian suppressants, VEGF / VEGFR inhibitors, EGF / EGFR inhibitors, PARP inhibitors, cytostatic alkaloids, cytotoxic antibiotics, antimetabolites, endocrine / hormonal agents, and bisphosphonate therapies. Other examples of additional therapeutic agents include nonsteroidal anti-inflammatory drugs (NSAIDs), selective COX-2 inhibitors, glucocorticoids, and conventional disease-modifying antirheumatic drugs (cDMARDs).
[0017] In one aspect, the present disclosure provides a method for detecting a tumor in a subject in need thereof, the method comprising: (a) administering to the subject a conjugate comprising an effective amount of a radiolabeled DOTA hapten and a multispecific antibody or antigen-binding fragment of the present technology that binds to the radiolabeled DOTA hapten, a tumor antigen, and a CD3 antigen, the conjugate being designed to localize to a tumor that expresses the tumor antigen recognized by the multispecific antibody or antigen-binding fragment of the conjugate; and (b) detecting the presence of a tumor in the subject by detecting a radioactivity level emitted by the conjugate that is higher than a reference value. In some embodiments, the subject is a human.
[0018] In another aspect, the present disclosure provides a method for detecting cancer in a subject in vivo, the method comprising: (a) administering to the subject an effective amount of an antibody or antigen-binding fragment of the present technology, wherein the antibody or antigen-binding fragment is configured to localize to cancer cells that express CD3 and is labeled with a radioisotope; and (b) detecting the presence of a tumor in the subject by detecting a level of radioactivity emitted by the antibody or antigen-binding fragment that is higher than a reference value. In some embodiments, the subject has been diagnosed with or is suspected of having cancer. The level of radioactivity emitted by the antibody or antigen-binding fragment can be detected using positron emission tomography or single-photon emission tomography. Additionally, or alternatively, in some embodiments, the method further comprises administering to the subject an effective amount of an immunoconjugate comprising an antibody or antigen-binding fragment of the present technology conjugated to a radionuclide. In some embodiments, the radionuclide is an alpha particle-emitting isotope, a beta particle-emitting isotope, an Auger emitter, or any combination thereof. Examples of beta particle-emitting isotopes include: 86 Y, 90 Y, 89 Sr, 165 Dy, 186 Re, 188 Re, 177 Lu, and 67 In some embodiments of the above methods, non-specific FcR-dependent binding in normal tissues is eliminated or reduced (e.g., via an N297A mutation in the Fc region that results in aglycosylation).
[0019] Also disclosed herein are kits for detecting and / or treating CD3-associated pathologies, comprising at least one immunoglobulin-related composition of the present technology (e.g., any antibody or antigen-binding fragment described herein), or a functional variant thereof (e.g., a substitution variant), and instructions for use. In certain embodiments, the immunoglobulin-related composition is coupled to one or more detectable labels. In one embodiment, the one or more detectable labels comprise a radioactive label, a fluorescent label, or a chromogenic label. Additionally or alternatively, in some embodiments, the kit further comprises a secondary antibody that specifically binds to the anti-CD3 immunoglobulin-related compositions described herein. In some embodiments, the secondary antibody is coupled to at least one detectable label selected from the group consisting of a radioactive label, a fluorescent label, or a chromogenic label.
[0020] In one aspect, the present disclosure provides a method for selecting a subject for pre-targeted radioimmunotherapy, the method comprising: (a) administering to the subject an effective amount of a conjugate comprising a radiolabeled DOTA hapten and a multispecific antibody or antigen-binding fragment of the present technology that binds to the radiolabeled DOTA hapten, a tumor antigen, and a CD3 antigen, wherein the conjugate is configured to localize to a tumor that expresses the tumor antigen recognized by the multispecific antibody or antigen-binding fragment of the conjugate; (b) detecting the level of radioactivity emitted by the conjugate; and (c) selecting the subject for pre-targeted radioimmunotherapy if the level of radioactivity emitted by the conjugate is higher than a reference value. In some embodiments, the subject is a human.
[0021] In one aspect, the present disclosure provides a method for increasing tumor sensitivity to radiation therapy in a subject diagnosed with cancer, the method comprising administering to the subject an effective amount of a conjugate comprising a radiolabeled DOTA hapten and a multispecific antibody or antigen-binding fragment of the present technology that recognizes and binds to the radiolabeled DOTA hapten, CD3 antigen, and a tumor antigen, wherein the conjugate is configured to localize to tumors that express the tumor antigen recognized by the multispecific antibody or antigen-binding fragment of the conjugate. In one aspect, the present disclosure provides a method of treating cancer in a subject in need thereof, comprising administering to the subject an effective amount of a conjugate comprising a radiolabeled DOTA hapten and a multispecific antibody or antigen-binding fragment of the present technology that recognizes and binds to the radiolabeled DOTA hapten, a CD3 antigen, and a tumor antigen, wherein the conjugate is configured to localize to tumors that express the tumor antigen recognized by the multispecific antibody or antigen-binding fragment of the conjugate.
[0022] In any of the above embodiments of the methods disclosed herein, the conjugate is administered intravenously, intramuscularly, intraarterially, intrathecally, intracapsularly, intraorbitally, intradermally, intraperitoneally, intratracheally, subcutaneously, intracerebroventricularly, orally, intratumorally, or intranasally. In some embodiments of the methods disclosed herein, the subject is a human. Additionally, or alternatively, in any of the above embodiments of the methods disclosed herein, the radiolabeled DOTA hapten is 213 Bi, 211 At, 225 Ac, 152 Dy, 212 Bi, 223 Ra, 219 Rn, 215 Po, 211 Bi, 221 Fr, 217 At, 255 Fm, 86 Y, 90 Y, 89 Sr, 165 Dy, 186 Re, 188 Re, 177 Lu, 67 Cu, 111 In, 67 Ga, 51 Cr, 58 Co, 99m Tc, 103m Rh, 195m Pt, 119 Sb, 161 Ho, 189m Os, 192 Ir, 201 Tl, 203 Pb, 68 Ga, 227 Th, or 64 It includes Cu and may include an alpha particle emitting isotope, a beta particle emitting isotope, or an Auger emitter.
[0023] Also disclosed herein is a method for selecting a subject for pre-targeted radioimmunotherapy, the method comprising: (a) administering to the subject an effective amount of a multispecific antibody or antigen-binding fragment of the present technology that binds to a radiolabeled DOTA hapten, a tumor antigen, and a CD3 antigen, wherein the multispecific antibody is configured to localize to a tumor that expresses the tumor antigen recognized by the multispecific antibody or antigen-binding fragment; (b) administering to the subject an effective amount of a radiolabeled DOTA hapten, wherein the radiolabeled DOTA hapten is configured to bind to the multispecific antibody or antigen-binding fragment; (c) detecting the level of radioactivity emitted by the multispecific antibody; and (d) selecting the subject for pre-targeted radioimmunotherapy if the level of radioactivity emitted by the multispecific antibody is higher than a reference value. In another aspect, the present disclosure provides a method for increasing tumor sensitivity to radiation therapy in a subject diagnosed with cancer, the method comprising: (a) administering to the subject an effective amount of a multispecific antibody or antigen-binding fragment of the present technology that binds to a radiolabeled DOTA hapten, a tumor antigen, and a CD3 antigen, wherein the multispecific antibody is configured to localize to a tumor that expresses the tumor antigen recognized by the multispecific antibody or antigen-binding fragment; and (b) administering to the subject an effective amount of a radiolabeled DOTA hapten, wherein the radiolabeled DOTA hapten is configured to bind to the multispecific antibody or antigen-binding fragment. In one aspect, the present disclosure provides a method of treating cancer in a subject in need thereof, the method comprising: (a) administering to the subject an effective amount of a radiolabeled DOTA hapten, a tumor antigen, and an effective amount of a multispecific antibody or antigen-binding fragment of the present technology that binds to a CD3 antigen, wherein the multispecific antibody is configured to localize to a tumor that expresses the tumor antigen recognized by the multispecific antibody or antigen-binding fragment; and (b) administering to the subject an effective amount of a radiolabeled DOTA hapten, wherein the radiolabeled DOTA hapten is configured to bind to the multispecific antibody or antigen-binding fragment.In some embodiments, the methods of the present technology further comprise administering an effective amount of a detergent to the subject prior to administration of the radiolabeled DOTA hapten.
[0024] Additionally or alternatively, in any of the above embodiments of the methods disclosed herein, the radiolabeled DOTA hapten is 213 Bi, 211 At, 225 Ac, 152 Dy, 212 Bi, 223 Ra, 219 Rn, 215 Po, 211 Bi, 221 Fr, 217 At, 255 Fm, 86 Y, 90 Y, 89 Sr, 165 Dy, 186 Re, 188 Re, 177 Lu, 67 Cu, 111 In, 67 Ga, 51 Cr, 58 Co, 99m Tc, 103m Rh, 195m Pt, 119 Sb, 161 Ho, 189m Os, 192 Ir, 201 Tl, 203 Pb, 68 Ga, 227 Th, or 64 Cu and may include an alpha particle emitting isotope, a beta particle emitting isotope, or an Auger emitter. In any of the above embodiments of the methods disclosed herein, the subject is a human.
[0025] In any and all embodiments of the methods disclosed herein, the multispecific antibody or antigen-binding fragment may be directed against any of the following: CD3, GPA33, HER2 / neu, GD2, MAGE-1, MAGE-3, BAGE, GAGE-1, GAGE-2, MUM-1, CDK4, N-acetylglucosamine transferase, p15, gp75, beta-catenin, ErbB2, cancer antigen 125 (CA-125), carcinoembryonic antigen (CEA), RAGE, MART (melanoma antigen), MUC-1, MUC-2, MUC-3, MUC-4, MUC-5ac, MUC-16, MUC-17, tyrosinase, Pmel 17 (gp100), GnT-V intron V sequence (N-acetylglucosamine transferase V intron V sequence), prostate cancer psm, PRAME (melanoma antigen), β-catenin, EBNA (Epstein-Barr virus nuclear antigen) 1-6, LMP2, p53, lung resistance protein (LRP), Bcl-2, prostate-specific antigen (PSA), Ki-67, CEACAM6, colon-specific antigen-p (CSA p), HLA-DR, CD40, CD74, CD138, EGFR, EGP-1, EGP-2, VEGF, PlGF, insulin-like growth factor (ILGF), tenascin, platelet-derived growth factor, IL-6, CD20, CD19, PSMA, CD33, CD123, MET, DLL4, Ang-2, HER3, IGF-1R, CD30, TAG-72, SPEAP, CD45, L1-CAM, Lewis Y (Le y ) antigen, E-cadherin, V-cadherin, GPC3, EpCAM, CD4, CD8, CD21, CD23, CD46, CD80, HLA-DR, CD74, CD22, CD14, CD15, CD16, CD123, TCR gamma / delta, NKp46, KIR, CD56, DLL3, PD-1, PD-L1, CD28, CD137, CD99, globo H, CD24, STEAP1, B7H3, polysialic acid, OX40, OX40-ligand, or peptide-MHC complexes (with peptides derived from TP53, KRAS, MYC, EBNA1-6, PRAME, MART, tyrosinase, MAGEA1-A6, pmel17, LMP2, or WT1). [Brief explanation of the drawings]
[0026] [Figure 1A] FIG. 1 is a schematic diagram of a modular tetravalent IgG-scFv format comprising an IgG molecule with two binding sites covalently linked to two scFvs that provide two additional binding domains. [Figure 1B]
[0023] Figure 1 shows an exemplary analysis of the biochemical purity of the BC276 (hOKT3 L2H2) BsAb of the present disclosure. The top panel shows a size-exclusion chromatography-high performance liquid chromatography (SEC-HPLC) profile. Proteins in the eluate were detected based on absorbance of ultraviolet light having a wavelength of 280 nm. The relative amounts of proteins in the SEC-HPLC peaks from the chromatogram are displayed in the bottom panel. [Figure 2] FIG. 1 shows the stability of humanized OKT3 IgG antibody BC276 (hOKT3 L2H2) at 40° C. The antibody was incubated at 40° C. and aliquots were removed at the indicated times to assess purity using HPLC. A line graph is shown plotting stability values as a function of time at 40° C. [Figure 3A] Figure 3 shows that BC276 induces potent T cell fratricide in vitro. T cells were incubated with 350 pM BC276 in the presence of interleukin-2, which supports T cell proliferation. CD19xCD3-specific IgG-L-scFv BsAb and humanized OKT3 IgG were used as controls. Figure 3A shows the number of CD4 T cell populations at the indicated time points. [Figure 3B] Figure 3B shows that BC276 induces potent T cell fratricide in vitro. T cells were incubated with 350 pM BC276 in the presence of interleukin-2, which supports T cell proliferation. CD19xCD3-specific IgG-L-scFv BsAb and humanized OKT3 IgG were used as controls. Figure 3B shows the number of CD8 T cell populations at the indicated time points. [Figure 4A]Figure 4 shows that BC276 BsAb induces profound T cell depletion in mice. NSG mice were intraperitoneally injected with 30 million PBMCs (a mixture of PBMCs from three different donors, 10 million cells from each donor). Treatment with 1 μg of BC276 BsAb injections began on day 8. Control mice were injected with no antibody (No Ab) or with anti-CD3×GD2-BsAb (BC119), which served as a negative control. Figure 4A shows flow cytometry profiles of peripheral blood stained with anti-human CD45 antibody at the indicated time points. [Figure 4B] Figure 4B shows that BC276 BsAb induces significant T cell depletion in mice. NSG mice were intraperitoneally injected with 30 million PBMCs (a mixture of PBMCs from three different donors, 10 million cells from each donor). Treatment with 1 μg of BC276 BsAb was initiated on day 8. Control mice were injected with no antibody (no Ab) or with anti-CD3×GD2-BsAb (BC119), which served as a negative control. Figure 4B (left panel) displays a line graph showing quantification of CD45+ cells per ml of peripheral blood at the indicated time points. Figure 4B (right panel) displays a graph showing quantification of CD45+ cells per ml of peripheral blood on either day 15 (upper panel) or day 22 (lower panel). [Figure 5A] Figure 5 shows the dose effect of BC276 BsAb on T cell depletion in mice. NSG mice were injected intraperitoneally with 30 million PBMCs (a mixture of PBMCs from three different donors, 10 million cells from each donor). Treatment with injections of 1 μg or 0.1 μg of BC276 BsAb or anti-CD3×GD2-BsAb (BC119, negative control) began on day 8. Figure 5A shows the flow cytometry profile of peripheral blood stained with anti-human CD45 antibody on day 15. [Figure 5B]Figure 5B shows the dose effect of BC276 BsAb on T cell depletion in mice. NSG mice were injected intraperitoneally with 30 million PBMCs (a mixture of PBMCs from three different donors, 10 million cells from each donor). Treatment with injections of 1 μg or 0.1 μg of BC276 BsAb or anti-CD3×GD2-BsAb (BC119, negative control) began on day 8. Figure 5B shows a graph showing quantification of CD45+ cells per ml of peripheral blood on day 15. [Figure 6A] Figure 6 shows that both CD4 and CD8 T cells were depleted in vivo upon treatment with BC276 BsAb. NSG mice were injected intraperitoneally with 30 million PBMCs (a mixture of PBMCs from three different donors, 10 million cells from each donor). Treatment with injections of 1 μg or 0.1 μg of BC276 BsAb or anti-CD3×GD2-BsAb (BC119, negative control) began on day 8. Figure 6A shows quantification of CD45+ cells per ml of peripheral blood at the indicated time points. [Figure 6B] Figure 6B shows that both CD4 and CD8 T cells were depleted in vivo upon treatment with BC276 BsAb. NSG mice were injected intraperitoneally with 30 million PBMCs (a mixture of PBMCs from three different donors, 10 million cells from each donor). Treatment with injections of 1 μg or 0.1 μg of BC276 BsAb or anti-CD3×GD2-BsAb (BC119, negative control) began on day 8. Figure 6B shows quantification of CD4+ cells per ml of peripheral blood at the indicated time points. [Figure 6C]Figure 6C shows that both CD4 and CD8 T cells were depleted in vivo by treatment with BC276 BsAb. NSG mice were intraperitoneally injected with 30 million PBMCs (a mixture of PBMCs from three different donors, 10 million cells from each donor). Treatment with injections of 1 μg or 0.1 μg of BC276 BsAb or anti-CD3×GD2-BsAb (BC119, negative control) began on day 8. Figure 6C shows quantification of CD8+ cells per ml of peripheral blood at the indicated time points. In Figure 6C, CD3BC refers to BC276 BsAb. [Figure 7] Figure 1 shows that T cell depletion is not associated with clinical side effects. NSG mice were injected intraperitoneally with 30 million PBMCs (a mixture of PBMCs from three different donors, 10 million from each donor). Treatment with injections of 1 μg or 0.1 μg of BC276 or anti-CD3- and GD2-BsAb (BC119, negative control) began on day 8. A line graph showing the body weight of animals receiving 1 μg or 0.1 μg of BC276 or anti-CD3- and GD2-BsAb (BC119, negative control) compared to the negative control is shown. [Figure 8A] Figure 8A shows the development of graft-versus-host disease (GVHD) in BC276-treated mice. NSG mice from the experiments described in Figures 6A-7 were used in the experiments. Antibody injections were stopped, and the mice were injected with a second dose of effector cells (22 million activated T cells per mouse). Antibody injections were then resumed as indicated. Figure 8A shows a line graph showing quantification of CD4+ cells per ml of peripheral blood at the indicated time points. [Figure 8B] Figure 8B shows the development of graft-versus-host disease (GVHD) in BC276-treated mice. NSG mice from the experiments described in Figures 6A-7 were used in the experiments. Antibody injections were stopped, and the mice were injected with a second dose of effector cells (22 million activated T cells per mouse). Antibody injections were then resumed as indicated. Figure 8B shows a line graph showing quantification of CD8+ cells per ml of peripheral blood at the indicated time points. [Figure 9]8A-8B are graphs of GVHD scores in mice treated with the indicated doses of BC276 or anti-CD3- and GD2-BsAb (BC119, negative control) antibody compared to mice not receiving antibody. Mice from the experiment described in Figures 8A-8B were randomized into five groups and received the following treatments: (1) 30 μg BC276, (2) 10 μg BC276, (3) 3 μg BC276, (4) 10 μg BC119 (CD3 × GD2 BsAb), and (5) no antibody (no Ab). GVHD scores were measured at the indicated times and plotted. [Figure 10] 9 is a line graph showing the body weights of animals treated with the indicated doses of BC276 or anti-CD3- and GD2-BsAb (BC119, negative control) antibodies compared to mice that received no antibody. Mice from the experiment described in FIG. 9 were weighed at the indicated time points and the body weights are plotted. [Figure 11] 10 is a line graph showing the body weights of animals treated with the indicated doses of BC276 or anti-CD3- and GD2-BsAb (BC119, negative control) antibodies compared to mice that did not receive the antibodies. Mice from the experiment described in FIG. 10 were weighed at the indicated time points and the body weights are plotted. [Figure 12A-1]Figure 1 shows the amino acid sequences of the mouse and humanized OKT3 heavy chain variable domains (SEQ ID NOs: 1, 5, 7-10, and 43-61, respectively). OKT3_VH (SEQ ID NO: 1) is the mouse OKT3 heavy chain variable domain sequence. OKT3_VH-1, OKT3_VH-2, OKT3_VH-3, OKT3_VH-4, VH-1 H105, VH-2 H105, VH-3 H105, VH-4 H105, VH-1 H44, VH-2 H44, VH-3 H44, VH-4 H44, VH-1 H100B, VH-2 H100B, VH-3 H100B, VH-4 H100B, VH-1 H100, VH-2 H100, VH-3 H100, VH-4 H100, VH-1 H101, VH-2 H101, VH-3 H101, and VH-4 H101 are variants of the humanized OKT3 heavy chain variable domain. The VHCDR1 sequence is GYTFTRYT (SEQ ID NO: 2), the VHCDR2 sequence is INPSRGYT (SEQ ID NO: 3), and the VHCDR3 sequence is ARYYDDHYCLDY (SEQ ID NO: 4), ARYYDDHYSLDY (SEQ ID NO: 6), ARYYDDHYSCDY (SEQ ID NO: 134), ARYYDDHCSLDY (SEQ ID NO: 135), or ARYYDDHYSLCY (SEQ ID NO: 136). VHCDR1-3 sequences are underlined. The CDR sequences of the VH of the humanized anti-CD3 antibody were determined using the IMGT definitions. [Figure 12A-2]Figure 1 shows the amino acid sequences of the mouse and humanized OKT3 heavy chain variable domains (SEQ ID NOs: 1, 5, 7-10, and 43-61, respectively). OKT3_VH (SEQ ID NO: 1) is the mouse OKT3 heavy chain variable domain sequence. OKT3_VH-1, OKT3_VH-2, OKT3_VH-3, OKT3_VH-4, VH-1 H105, VH-2 H105, VH-3 H105, VH-4 H105, VH-1 H44, VH-2 H44, VH-3 H44, VH-4 H44, VH-1 H100B, VH-2 H100B, VH-3 H100B, VH-4 H100B, VH-1 H100, VH-2 H100, VH-3 H100, VH-4 H100, VH-1 H101, VH-2 H101, VH-3 H101, and VH-4 H101 are variants of the humanized OKT3 heavy chain variable domain. The VHCDR1 sequence is GYTFTRYT (SEQ ID NO: 2), the VHCDR2 sequence is INPSRGYT (SEQ ID NO: 3), and the VHCDR3 sequence is ARYYDDHYCLDY (SEQ ID NO: 4), ARYYDDHYSLDY (SEQ ID NO: 6), ARYYDDHYSCDY (SEQ ID NO: 134), ARYYDDHCSLDY (SEQ ID NO: 135), or ARYYDDHYSLCY (SEQ ID NO: 136). VHCDR1-3 sequences are underlined. The CDR sequences of the VH of the humanized anti-CD3 antibody were determined using the IMGT definitions. [Figure 12A-3]Figure 1 shows the amino acid sequences of the mouse and humanized OKT3 heavy chain variable domains (SEQ ID NOs: 1, 5, 7-10, and 43-61, respectively). OKT3_VH (SEQ ID NO: 1) is the mouse OKT3 heavy chain variable domain sequence. OKT3_VH-1, OKT3_VH-2, OKT3_VH-3, OKT3_VH-4, VH-1 H105, VH-2 H105, VH-3 H105, VH-4 H105, VH-1 H44, VH-2 H44, VH-3 H44, VH-4 H44, VH-1 H100B, VH-2 H100B, VH-3 H100B, VH-4 H100B, VH-1 H100, VH-2 H100, VH-3 H100, VH-4 H100, VH-1 H101, VH-2 H101, VH-3 H101, and VH-4 H101 are variants of the humanized OKT3 heavy chain variable domain. The VHCDR1 sequence is GYTFTRYT (SEQ ID NO: 2), the VHCDR2 sequence is INPSRGYT (SEQ ID NO: 3), and the VHCDR3 sequence is ARYYDDHYCLDY (SEQ ID NO: 4), ARYYDDHYSLDY (SEQ ID NO: 6), ARYYDDHYSCDY (SEQ ID NO: 134), ARYYDDHCSLDY (SEQ ID NO: 135), or ARYYDDHYSLCY (SEQ ID NO: 136). VHCDR1-3 sequences are underlined. The CDR sequences of the VH of the humanized anti-CD3 antibody were determined using the IMGT definitions. [Figure 12A-4]Figure 1 shows the amino acid sequences of the mouse and humanized OKT3 heavy chain variable domains (SEQ ID NOs: 1, 5, 7-10, and 43-61, respectively). OKT3_VH (SEQ ID NO: 1) is the mouse OKT3 heavy chain variable domain sequence. OKT3_VH-1, OKT3_VH-2, OKT3_VH-3, OKT3_VH-4, VH-1 H105, VH-2 H105, VH-3 H105, VH-4 H105, VH-1 H44, VH-2 H44, VH-3 H44, VH-4 H44, VH-1 H100B, VH-2 H100B, VH-3 H100B, VH-4 H100B, VH-1 H100, VH-2 H100, VH-3 H100, VH-4 H100, VH-1 H101, VH-2 H101, VH-3 H101, and VH-4 H101 are variants of the humanized OKT3 heavy chain variable domain. The VHCDR1 sequence is GYTFTRYT (SEQ ID NO: 2), the VHCDR2 sequence is INPSRGYT (SEQ ID NO: 3), and the VHCDR3 sequence is ARYYDDHYCLDY (SEQ ID NO: 4), ARYYDDHYSLDY (SEQ ID NO: 6), ARYYDDHYSCDY (SEQ ID NO: 134), ARYYDDHCSLDY (SEQ ID NO: 135), or ARYYDDHYSLCY (SEQ ID NO: 136). VHCDR1-3 sequences are underlined. The CDR sequences of the VH of the humanized anti-CD3 antibody were determined using the IMGT definitions. [Figure 12A-5]Figure 1 shows the amino acid sequences of the mouse and humanized OKT3 heavy chain variable domains (SEQ ID NOs: 1, 5, 7-10, and 43-61, respectively). OKT3_VH (SEQ ID NO: 1) is the mouse OKT3 heavy chain variable domain sequence. OKT3_VH-1, OKT3_VH-2, OKT3_VH-3, OKT3_VH-4, VH-1 H105, VH-2 H105, VH-3 H105, VH-4 H105, VH-1 H44, VH-2 H44, VH-3 H44, VH-4 H44, VH-1 H100B, VH-2 H100B, VH-3 H100B, VH-4 H100B, VH-1 H100, VH-2 H100, VH-3 H100, VH-4 H100, VH-1 H101, VH-2 H101, VH-3 H101, and VH-4 H101 are variants of the humanized OKT3 heavy chain variable domain. The VHCDR1 sequence is GYTFTRYT (SEQ ID NO: 2), the VHCDR2 sequence is INPSRGYT (SEQ ID NO: 3), and the VHCDR3 sequence is ARYYDDHYCLDY (SEQ ID NO: 4), ARYYDDHYSLDY (SEQ ID NO: 6), ARYYDDHYSCDY (SEQ ID NO: 134), ARYYDDHCSLDY (SEQ ID NO: 135), or ARYYDDHYSLCY (SEQ ID NO: 136). VHCDR1-3 sequences are underlined. The CDR sequences of the VH of the humanized anti-CD3 antibody were determined using the IMGT definitions. [Figure 12A-6]Figure 1 shows the amino acid sequences of the mouse and humanized OKT3 heavy chain variable domains (SEQ ID NOs: 1, 5, 7-10, and 43-61, respectively). OKT3_VH (SEQ ID NO: 1) is the mouse OKT3 heavy chain variable domain sequence. OKT3_VH-1, OKT3_VH-2, OKT3_VH-3, OKT3_VH-4, VH-1 H105, VH-2 H105, VH-3 H105, VH-4 H105, VH-1 H44, VH-2 H44, VH-3 H44, VH-4 H44, VH-1 H100B, VH-2 H100B, VH-3 H100B, VH-4 H100B, VH-1 H100, VH-2 H100, VH-3 H100, VH-4 H100, VH-1 H101, VH-2 H101, VH-3 H101, and VH-4 H101 are variants of the humanized OKT3 heavy chain variable domain. The VHCDR1 sequence is GYTFTRYT (SEQ ID NO: 2), the VHCDR2 sequence is INPSRGYT (SEQ ID NO: 3), and the VHCDR3 sequence is ARYYDDHYCLDY (SEQ ID NO: 4), ARYYDDHYSLDY (SEQ ID NO: 6), ARYYDDHYSCDY (SEQ ID NO: 134), ARYYDDHCSLDY (SEQ ID NO: 135), or ARYYDDHYSLCY (SEQ ID NO: 136). VHCDR1-3 sequences are underlined. The CDR sequences of the VH of the humanized anti-CD3 antibody were determined using the IMGT definitions. [Figure 12B-1]Figure 1 shows the amino acid sequences of the mouse and humanized OKT3 light chain variable domains (SEQ ID NOs: 11, 15-20, and 62-91, respectively). OKT3_VL (SEQ ID NO: 11) is the mouse OKT3 light chain variable domain sequence. OKT3_VL-1, OKT3_VL-2, OKT3_VL-3, OKT3_VL-4, OKT3_VL-5, OKT3_VL-6, VL-1 L100, VL-2 L100, VL-3 L100, VL-4 L100, VL-5 L100, VL-6 L100, VL-1 L43, VL-2 L43, VL-3 L43, VL-4 L43, VL-5 L43, VL-6 L43, VL-1 L49, VL-2 L49, VL-3 L49, VL-4 L49, VL-5 L49, VL-6 L49, VL-1 L50, VL-2 L50, VL-3 L50, VL-4 L50, VL-5 L50, VL-6 L50, VL-1 L46, VL-2 L46, VL-3 L46, VL-4 L46, VL-5 L46, and VL-6 L46 are variants of the humanized OKT3 light chain variable domain. The VLCDR1 sequence is SSVSY (SEQ ID NO: 12), the VLCDR2 sequence is DT (SEQ ID NO: 13), and the VLCDR3 sequence is QQWSSNPFT (SEQ ID NO: 14). VLCDR1-3 sequences are underlined. The CDR sequences of the VL of the humanized anti-CD3 antibody were determined using the IMGT definition. [Figure 12B-2]Figure 1 shows the amino acid sequences of the mouse and humanized OKT3 light chain variable domains (SEQ ID NOs: 11, 15-20, and 62-91, respectively). OKT3_VL (SEQ ID NO: 11) is the mouse OKT3 light chain variable domain sequence. OKT3_VL-1, OKT3_VL-2, OKT3_VL-3, OKT3_VL-4, OKT3_VL-5, OKT3_VL-6, VL-1 L100, VL-2 L100, VL-3 L100, VL-4 L100, VL-5 L100, VL-6 L100, VL-1 L43, VL-2 L43, VL-3 L43, VL-4 L43, VL-5 L43, VL-6 L43, VL-1 L49, VL-2 L49, VL-3 L49, VL-4 L49, VL-5 L49, VL-6 L49, VL-1 L50, VL-2 L50, VL-3 L50, VL-4 L50, VL-5 L50, VL-6 L50, VL-1 L46, VL-2 L46, VL-3 L46, VL-4 L46, VL-5 L46, and VL-6 L46 are variants of the humanized OKT3 light chain variable domain. The VLCDR1 sequence is SSVSY (SEQ ID NO: 12), the VLCDR2 sequence is DT (SEQ ID NO: 13), and the VLCDR3 sequence is QQWSSNPFT (SEQ ID NO: 14). VLCDR1-3 sequences are underlined. The CDR sequences of the VL of the humanized anti-CD3 antibody were determined using the IMGT definition. [Figure 12B-3]Figure 1 shows the amino acid sequences of the mouse and humanized OKT3 light chain variable domains (SEQ ID NOs: 11, 15-20, and 62-91, respectively). OKT3_VL (SEQ ID NO: 11) is the mouse OKT3 light chain variable domain sequence. OKT3_VL-1, OKT3_VL-2, OKT3_VL-3, OKT3_VL-4, OKT3_VL-5, OKT3_VL-6, VL-1 L100, VL-2 L100, VL-3 L100, VL-4 L100, VL-5 L100, VL-6 L100, VL-1 L43, VL-2 L43, VL-3 L43, VL-4 L43, VL-5 L43, VL-6 L43, VL-1 L49, VL-2 L49, VL-3 L49, VL-4 L49, VL-5 L49, VL-6 L49, VL-1 L50, VL-2 L50, VL-3 L50, VL-4 L50, VL-5 L50, VL-6 L50, VL-1 L46, VL-2 L46, VL-3 L46, VL-4 L46, VL-5 L46, and VL-6 L46 are variants of the humanized OKT3 light chain variable domain. The VLCDR1 sequence is SSVSY (SEQ ID NO: 12), the VLCDR2 sequence is DT (SEQ ID NO: 13), and the VLCDR3 sequence is QQWSSNPFT (SEQ ID NO: 14). VLCDR1-3 sequences are underlined. The CDR sequences of the VL of the humanized anti-CD3 antibody were determined using the IMGT definition. [Figure 12B-4]Figure 1 shows the amino acid sequences of the mouse and humanized OKT3 light chain variable domains (SEQ ID NOs: 11, 15-20, and 62-91, respectively). OKT3_VL (SEQ ID NO: 11) is the mouse OKT3 light chain variable domain sequence. OKT3_VL-1, OKT3_VL-2, OKT3_VL-3, OKT3_VL-4, OKT3_VL-5, OKT3_VL-6, VL-1 L100, VL-2 L100, VL-3 L100, VL-4 L100, VL-5 L100, VL-6 L100, VL-1 L43, VL-2 L43, VL-3 L43, VL-4 L43, VL-5 L43, VL-6 L43, VL-1 L49, VL-2 L49, VL-3 L49, VL-4 L49, VL-5 L49, VL-6 L49, VL-1 L50, VL-2 L50, VL-3 L50, VL-4 L50, VL-5 L50, VL-6 L50, VL-1 L46, VL-2 L46, VL-3 L46, VL-4 L46, VL-5 L46, and VL-6 L46 are variants of the humanized OKT3 light chain variable domain. The VLCDR1 sequence is SSVSY (SEQ ID NO: 12), the VLCDR2 sequence is DT (SEQ ID NO: 13), and the VLCDR3 sequence is QQWSSNPFT (SEQ ID NO: 14). VLCDR1-3 sequences are underlined. The CDR sequences of the VL of the humanized anti-CD3 antibody were determined using the IMGT definition. [Figure 12B-5]Figure 1 shows the amino acid sequences of the mouse and humanized OKT3 light chain variable domains (SEQ ID NOs: 11, 15-20, and 62-91, respectively). OKT3_VL (SEQ ID NO: 11) is the mouse OKT3 light chain variable domain sequence. OKT3_VL-1, OKT3_VL-2, OKT3_VL-3, OKT3_VL-4, OKT3_VL-5, OKT3_VL-6, VL-1 L100, VL-2 L100, VL-3 L100, VL-4 L100, VL-5 L100, VL-6 L100, VL-1 L43, VL-2 L43, VL-3 L43, VL-4 L43, VL-5 L43, VL-6 L43, VL-1 L49, VL-2 L49, VL-3 L49, VL-4 L49, VL-5 L49, VL-6 L49, VL-1 L50, VL-2 L50, VL-3 L50, VL-4 L50, VL-5 L50, VL-6 L50, VL-1 L46, VL-2 L46, VL-3 L46, VL-4 L46, VL-5 L46, and VL-6 L46 are variants of the humanized OKT3 light chain variable domain. The VLCDR1 sequence is SSVSY (SEQ ID NO: 12), the VLCDR2 sequence is DT (SEQ ID NO: 13), and the VLCDR3 sequence is QQWSSNPFT (SEQ ID NO: 14). VLCDR1-3 sequences are underlined. The CDR sequences of the VL of the humanized anti-CD3 antibody were determined using the IMGT definition. [Figure 12B-6]Figure 1 shows the amino acid sequences of the mouse and humanized OKT3 light chain variable domains (SEQ ID NOs: 11, 15-20, and 62-91, respectively). OKT3_VL (SEQ ID NO: 11) is the mouse OKT3 light chain variable domain sequence. OKT3_VL-1, OKT3_VL-2, OKT3_VL-3, OKT3_VL-4, OKT3_VL-5, OKT3_VL-6, VL-1 L100, VL-2 L100, VL-3 L100, VL-4 L100, VL-5 L100, VL-6 L100, VL-1 L43, VL-2 L43, VL-3 L43, VL-4 L43, VL-5 L43, VL-6 L43, VL-1 L49, VL-2 L49, VL-3 L49, VL-4 L49, VL-5 L49, VL-6 L49, VL-1 L50, VL-2 L50, VL-3 L50, VL-4 L50, VL-5 L50, VL-6 L50, VL-1 L46, VL-2 L46, VL-3 L46, VL-4 L46, VL-5 L46, and VL-6 L46 are variants of the humanized OKT3 light chain variable domain. The VLCDR1 sequence is SSVSY (SEQ ID NO: 12), the VLCDR2 sequence is DT (SEQ ID NO: 13), and the VLCDR3 sequence is QQWSSNPFT (SEQ ID NO: 14). VLCDR1-3 sequences are underlined. The CDR sequences of the VL of the humanized anti-CD3 antibody were determined using the IMGT definition. [Figure 13A] Figure 13A shows the amino acid and nucleotide sequence (SEQ ID NOs: 21-22) of the light chain of the humanized OKT3xCD3 BsAb, BC276 (hOKT3 H2L2DS). The signal peptide is underlined, the variable domains of the humanized anti-CD3 BsAb are shown in italic font, and the linker sequence is shown in italic, underlined, bold font. [Figure 13B]Figure 13B shows the amino acid and nucleotide sequences (SEQ ID NOS: 23-24) of the heavy chains of humanized OKT3xCD3 BsAbs, BC276 (hOKT3 H2L2DS) or BC276.1 (hOKT3 H2L2), respectively. The signal peptide is underlined, the variable domains of the humanized anti-CD3 BsAb are shown in italic font, and the linker sequence is shown in italic, underlined, bold font. [Figure 13C] Figure 13C shows the amino acid and nucleotide sequence (SEQ ID NOs: 92-93) of the light chain of the humanized OKT3xCD3 BsAb, BC276.1 (hOKT3 H2L2). The signal peptide is underlined, the variable domains of the humanized anti-CD3 BsAb are shown in italic font, and the linker sequence is shown in italic, underlined, bold font. [Figure 14A] Figure 14A shows the amino acid and nucleotide sequence of the light chain of the humanized anti-GD2 / anti-CD3 h3F8xhOKT3 BsAb (SEQ ID NOs: 94-95). The signal peptide is underlined, the variable domains of the h3F8xhOKT3 BsAb are shown in italic font, and the linker sequence is shown in underlined bold font. [Figure 14B] Figure 14B shows the amino acid and nucleotide sequence of the heavy chain of humanized h3F8xhOKT3 BsAb (SEQ ID NOs: 96-97). The signal peptide is underlined, the variable domains of h3F8xhOKT3 BsAb are shown in italic font, and the linker sequence is shown in underlined bold font. [Figure 15A] Figure 15A shows the amino acid and nucleotide sequence of the light chain of the humanized anti-CD33 / anti-CD3 hM195xhOKT3 BsAb (SEQ ID NOs: 98-99). The signal peptide is underlined, the variable domains of the hM195xhOKT3 BsAb are shown in italic font, and the linker sequence is shown in underlined bold font. [Figure 15B]Figure 15B shows the amino acid and nucleotide sequence of the heavy chain of humanized hM195xhOKT3 BsAb (SEQ ID NOs: 100-101). The signal peptide is underlined, the variable domains of hM195xhOKT3 BsAb are shown in italic font, and the linker sequence is shown in underlined bold font. [Figure 16A] Figure 16A shows the amino acid and nucleotide sequence of the light chain of the humanized anti-glypican-3 / anti-CD3 hGPC3xhOKT3 BsAb (SEQ ID NOs: 94-95). The signal peptide is underlined, the variable domains of the hGPC3xhOKT3 BsAb are shown in italic font, and the linker sequence is shown in underlined bold font. [Figure 16B] Figure 16B shows the amino acid and nucleotide sequence of the heavy chain of humanized hGPC3xhOKT3 BsAb (SEQ ID NOs: 104-105). The signal peptide is underlined, the variable domains of hGPC3xhOKT3 BsAb are shown in italic font, and the linker sequence is shown in underlined bold font. [Figure 17A] Figure 17A shows the amino acid and nucleotide sequence of the light chain of the humanized anti-CD19 / anti-CD3 hFMC63xhOKT3 BsAb (SEQ ID NOs: 106-107). The signal peptide is underlined, the variable domains of the hFMC63xhOKT3 BsAb are shown in italic font, and the linker sequence is shown in underlined bold font. [Figure 17B] Figure 17B shows the amino acid and nucleotide sequence of the heavy chain of humanized hFMC63xhOKT3 BsAb (SEQ ID NOs: 108-109). The signal peptide is underlined, the variable domains of hFMC63xhOKT3 BsAb are shown in italic font, and the linker sequence is shown in underlined bold font. [Figure 18A]Figure 18A shows the amino acid and nucleotide sequence of the light chain of humanized hSTEAP1xhOKT3 BsAb (SEQ ID NOs: 110-111). The signal peptide is underlined, the variable domains of hSTEAP1xhOKT3 BsAb are shown in italic font, and the linker sequence is shown in underlined bold font. [Figure 18B] Figure 18B shows the amino acid and nucleotide sequence of the heavy chain of humanized hSTEAP1xhOKT3 BsAb (SEQ ID NOs: 112-113). The signal peptide is underlined, the variable domains of hSTEAP1xhOKT3 BsAb are shown in italic font, and the linker sequence is shown in underlined bold font. [Figure 19A] Figure 19A shows the amino acid and nucleotide sequence of the light chain of the humanized anti-CD33 / anti-CD3 hHIM34xhOKT3 BsAb (SEQ ID NOs: 114-115). The signal peptide is underlined, the variable domains of the hHIM34SxhOKT3 BsAb are shown in italic font, and the linker sequence is shown in underlined bold font. [Figure 19B] Figure 19B shows the amino acid and nucleotide sequence of the heavy chain of humanized hHIM34xhOKT3 BsAb (SEQ ID NOs: 116-117). The signal peptide is underlined, the variable domains of hHIM34xhOKT3 BsAb are shown in italic font, and the linker sequence is shown in underlined bold font. [Figure 20A] Figure 20A shows the amino acid sequences (SEQ ID NO: 118) of humanized 3F8xhOKT3 BsAb, humanized STEAP1xhOKT3 BsAb, humanized HER2xhOKT3 BsAb, and humanized FMC63xhOKT3 BsAb in the single-chain bispecific tandem fragment variable (scBsTaFv) format. The signal peptide is underlined, the variable domains of the scBsTaFv are italicized, the linker sequence is in bold font, the p53 tetramerization domain is italicized and underlined, and the histidine 6 tag is in bold and underlined font. [Figure 20B]Figure 20B shows the amino acid sequences (SEQ ID NO: 119) of humanized 3F8xhOKT3 BsAb, humanized STEAP1xhOKT3 BsAb, humanized HER2xhOKT3 BsAb, and humanized FMC63xhOKT3 BsAb in the single-chain bispecific tandem fragment variable (scBsTaFv) format. The signal peptide is underlined, the variable domains of the scBsTaFv are italicized, the linker sequence is in bold font, the p53 tetramerization domain is italicized and underlined, and the histidine 6 tag is in bold and underlined font. [Figure 20C] Figure 20C shows the amino acid sequences (SEQ ID NO: 120) of humanized 3F8xhOKT3 BsAb, humanized STEAP1xhOKT3 BsAb, humanized HER2xhOKT3 BsAb, and humanized FMC63xhOKT3 BsAb in the single-chain bispecific tandem fragment variable (scBsTaFv) format. The signal peptide is underlined, the variable domains of the scBsTaFv are italicized, the linker sequence is in bold font, the p53 tetramerization domain is italicized and underlined, and the histidine 6 tag is in bold and underlined font. [Figure 20D] Figure 20D shows the amino acid sequences (SEQ ID NO: 121) of humanized 3F8xhOKT3 BsAb, humanized STEAP1xhOKT3 BsAb, humanized HER2xhOKT3 BsAb, and humanized FMC63xhOKT3 BsAb in the single-chain bispecific tandem fragment variable (scBsTaFv) format. The signal peptide is underlined, the variable domains of the scBsTaFv are italicized, the linker sequence is in bold font, the p53 tetramerization domain is italicized and underlined, and the histidine 6 tag is in bold and underlined font. [Figure 21A] Figure 21A shows the amino acid and nucleotide sequence of the light chain of humanized h3F8xhC825 Ab (SEQ ID NOs: 122-123). The signal peptide is underlined, the heavy and light chain variable domains are shown in italic font, and the linker sequence is shown in underlined bold font. [Figure 21B] Figure 21B shows the amino acid and nucleotide sequence of the light chain of humanized h3F8xhOKT3 Ab (SEQ ID NOs: 124-125). The signal peptide is underlined, the heavy and light chain variable domains are shown in italic font, and the linker sequence is shown in underlined bold font. [Figure 21C] Figure 21C shows the amino acid and nucleotide sequence of the heavy chain K of humanized h3F8 Ab (SEQ ID NOs: 126-127). The signal peptide is underlined, the variable domains of the heavy and light chains are shown in italic font, and the linker sequence is shown in underlined bold font. [Figure 21D] Figure 21D shows the amino acid and nucleotide sequence of the heavy chain F of humanized h3F8 Ab (SEQ ID NOs: 137-138). The signal peptide is underlined, the variable domains of the heavy and light chains are shown in italic font, and the linker sequence is shown in underlined bold font. [Figure 22A] Figure 22A shows the amino acid and nucleotide sequence of the light chain of humanized hSTEAP1xhC825 Ab (SEQ ID NOs: 128-129). The signal peptide is underlined, the heavy and light chain variable domains are shown in italic font, and the linker sequence is shown in underlined bold font. [Figure 22B] Figure 22B shows the amino acid and nucleotide sequence of the light chain of humanized hSTEAP1xhOKT3 Ab (SEQ ID NOs: 130-131). The signal peptide is underlined, the heavy and light chain variable domains are shown in italic font, and the linker sequence is shown in underlined bold font. [Figure 22C] Figure 22C shows the amino acid and nucleotide sequence of the heavy chain K of humanized hSTEAP1 Ab (SEQ ID NOs: 132-133). The signal peptide is underlined, the heavy and light chain variable domains are shown in italic font, and the linker sequence is shown in underlined bold font. [Figure 22D]Figure 22D shows the amino acid and nucleotide sequence of the heavy chain F of humanized hSTEAP1 Ab (SEQ ID NOs: 139-140). The signal peptide is underlined, the heavy and light chain variable domains are shown in italic font, and the linker sequence is shown in underlined bold font. [Figure 23A] Figure 23A shows the efficacy of an anti-GD2 anti-CD3 bispecific antibody (comprising SEQ ID NO: 94 and SEQ ID NO: 96) against a GD2-expressing neuroblastoma cell line (IMR32). [Figure 23B] Figure 23B shows the efficacy of anti-GPC3 anti-CD3 bispecific antibodies (comprising SEQ ID NO: 102 and SEQ ID NO: 104) against a GPC3-expressing liver cancer cell line (HEPG2). [Figure 24A] FIG. 24A shows that the CEM-NKR T cell line, which lacks CD3 expression, was not responsive to treatment with BC276 BsAb. [Figure 24B] Figure 24B shows that HUT78 T cells, which express high levels of CD3, were killed in an antibody-dependent T cell-mediated cytotoxicity (ADTC) assay when treated with BC276 BsAb, whereas the symmetric antibody HER2-BsAb directed against HER2 showed no cytotoxicity. [Figure 24C] Figure 24C shows that Jurkat T cells, which express high levels of CD3, were killed in an antibody-dependent T cell-mediated cytotoxicity (ADTC) assay when treated with BC276 BsAb, whereas the symmetric antibody HER2-BsAb directed against HER2 showed no cytotoxicity. [Figure 24D] Figure 24D shows that 8402 T cells, which express high levels of CD3, were killed in an antibody-dependent T cell-mediated cytotoxicity (ADTC) assay when treated with BC276 BsAb, whereas the symmetric antibody HER2-BsAb directed against HER2 showed no cytotoxicity. [Figure 24E] FIG. 24E shows that the MOLT4 T cell line, which lacks CD3 expression, was not responsive to treatment with BC276 BsAb. [Figure 25]Figure 1 shows that signs of anxiety, such as hypoactivity, hunched posture, or ruffled fur, were not observed in animals treated with BC276 BsAb. NSG mice were injected intraperitoneally with 30 million PBMCs (a mixture of PBMCs from three different donors, 10 million cells from each donor) on day 0. Starting on day 8, mice were treated with vehicle control (no antibody), 1 μg or 0.1 μg of BC276 BsAb, or 1 μg or 0.1 μg of BC119 BsAb. Mice were evaluated for clinical signs of anxiety (i.e., hypoactivity, hunched posture, or ruffled fur). [Figure 26] Figure 1 shows five GPC3 x CD3 bispecific antibodies (BsAbs) that share the same Fab that binds to the glypican-3 antigen. Each bispecific antibody represents a different anti-CD3 scFv linked to a constant light chain. The dotted circle indicates the anti-CD3 scFv. BsAbs 1 to 5 represent the anti-CD3 scFv clones huOKT3, CD3_H2L2, CD3_H2L5, CD3_H4L2, and CD3_H4L5, respectively. [Figure 27] FIG. 27 shows the amino acid sequences of the anti-CD3 scFv regions of the five GPC3×CD3 bispecific antibodies (BsAbs) (SEQ ID NOs: 141 to 145) shown in FIG. 26. [Figure 28] Figure 26 shows the different binding affinities of the five GPC3xCD3 BsAbs described in Figure 26 for ex vivo expanded human T cells using flow cytometry. Human T cells activated with anti-CD3 / CD28 beads for 21 days were harvested and incubated with BsAb (1 x 10 T cells for each sample) followed by secondary goat anti-human IgG PE. Baseline values (geometric MFI, gMFI) were obtained from T cells incubated with goat anti-human IgG PE alone without BsAb. Normalized gMFI values were calculated by deducting the gMFI of each sample from the baseline value. BsAb #3 showed the highest binding affinity for human T cells, followed by BsAb #1, #2, #5, and #4. BsAb #6, which does not contain anti-CD3 scFv, was included as a negative control. [Figure 29] This figure shows that the binding affinities of the exemplary BsAbs for human recombinant CD3δ / ε are not extremely different, as determined using SPR. Human recombinant CD3 epsilon & CD3 delta heterodimer proteins were immobilized on a CM5 sensor chip using an amine coupling kit, and BsAbs (diluted in HBS-EP buffer, concentrations ranging from 6.25 nM to 100 nM) were injected over the sensor surface at a flow rate of 30 μl / min for 2 min. At the end of each cycle, the surface was regenerated with 10 mM NaOH. Samples were run on a Biacore T200 instrument. All data were fit to a two-state fitting model, KD = kd / ka, using the Biacore T200 evaluation software. The binding affinities of the BsAbs for human CD3 antigen, as indicated by KD values, show that BsAbs #1, #2, #3, and #5 bound with similar affinities, while BsAb #4 showed a 1-log lower binding affinity. [Figure 30] Figure 1 shows that the exemplary BsAbs differentially induce surface expression of T cell activation markers CD69 and CD25, respectively. Human T cells activated with anti-CD3 / CD28 beads for 21 days were harvested and cocultured with HepG2 cells at a 10:1 ratio (100,000 T cells to 10,000 HepG2 cells) for 3 days at 37°C. After 3 days, cells were harvested and stained for hCD3, hCD4, hCD8, hCD69, and hCD25. Cells were prestained with fixable live-dead dye (NIR) prior to cell surface staining. Singlets, NIR-, and hCD3+ cells were pregated and analyzed for CD8 T cell expression for hCD69 or hCD25. BsAbs #1, #2, #3, and #5 induced similar percentages of CD69+ T cells, and BsAb #4 weakly activated CD8 T cell expression of CD69. A similar trend was observed for CD25 expression on CD8 T cells, with BsAb #4 weakly inducing CD25 expression compared with BsAbs #1, #2, #3, and #5. [Figure 31]Figure 1 shows that the exemplary BsAbs differentially induce surface expression of T cell activation markers CD69 and CD25, respectively. Human T cells activated with anti-CD3 / CD28 beads for 21 days were harvested and cocultured with HepG2 cells at a 10:1 ratio (100,000 T cells to 10,000 HepG2 cells) for 3 days at 37°C. After 3 days, cells were harvested and stained for hCD3, hCD4, hCD8, hCD69, and hCD25. Cells were prestained with fixable live-dead dye (NIR) prior to cell surface staining. Singlets, NIR-, and hCD3+ cells were pregated and analyzed for CD8 T cell expression for hCD69 or hCD25. BsAbs #1, #2, #3, and #5 induced similar percentages of CD69+ T cells, and BsAb #4 weakly activated CD8 T cell expression of CD69. A similar trend was observed for CD25 expression on CD8 T cells, with BsAb #4 weakly inducing CD25 expression compared with BsAbs #1, #2, #3, and #5. [Figure 32A]Figure 32A shows that the exemplary BsAbs induce robust T cell proliferation. Human T cells activated with anti-CD3 / CD28 beads for 14 days were harvested and labeled with the CellTrace™ Violet Cell Proliferation Kit (Invitrogen™). T cells were cocultured with HepG2 cells at a 10:1 ratio (100,000 T cells to 10,000 HepG2 cells). After 96 hours, cells were harvested and stained for hCD3, hCD4, and hCD8. Cells were prestained with a fixable live-dead dye (NIR) prior to cell surface staining. (Top) Figure 32A. BsAbs #1, #2, #3, and #5 drove robust CD8 T cell proliferation, with over 70% of CD8 T cells undergoing active division at a BsAb concentration of only 6.4 ng / ml. Not only did BsAb #4 weakly induce CD8 T cell activation, but at a BsAb concentration of 6.4 ng / ml, few CD8 T cells (15%) divided. Figure 32A, bottom. CD8 T cell viability did not decrease with increasing concentrations in T and HepG2 coculture assays. Similar CD8 T cell viability (10-20%) was observed among all BsAbs. Figure 32B. Singlets, NIR-, and hCD3+ cells were pre-gated and analyzed for violet (excitation / emission 405 / 450) intensity on CD8 T cells. Non-dividing CD8 T cells harbored the highest intensity of CellTrace dye, with each cell division resulting in dye dilution and a decrease in intensity. [Figure 32B]Figure 32A shows that the exemplary BsAbs induce robust T cell proliferation. Human T cells activated with anti-CD3 / CD28 beads for 14 days were harvested and labeled with the CellTrace™ Violet Cell Proliferation Kit (Invitrogen™). T cells were cocultured with HepG2 cells at a 10:1 ratio (100,000 T cells to 10,000 HepG2 cells). After 96 hours, cells were harvested and stained for hCD3, hCD4, and hCD8. Cells were prestained with a fixable live-dead dye (NIR) prior to cell surface staining. (Top) Figure 32A. BsAbs #1, #2, #3, and #5 drove robust CD8 T cell proliferation, with over 70% of CD8 T cells undergoing active division at a BsAb concentration of only 6.4 ng / ml. Not only did BsAb #4 weakly induce CD8 T cell activation, but at a BsAb concentration of 6.4 ng / ml, few CD8 T cells (15%) divided. Figure 32A, bottom. CD8 T cell viability did not decrease with increasing concentrations in T and HepG2 coculture assays. Similar CD8 T cell viability (10-20%) was observed among all BsAbs. Figure 32B. Singlets, NIR-, and hCD3+ cells were pre-gated and analyzed for violet (excitation / emission 405 / 450) intensity on CD8 T cells. Non-dividing CD8 T cells harbored the highest intensity of CellTrace dye, with each cell division resulting in dye dilution and a decrease in intensity. [Figure 33]Figure 1 shows BsAb-binding T cell-mediated killing of the HepG2 hepatocellular carcinoma cell line. Human T cells activated with anti-CD3 / CD28 beads for 14 days were harvested and cocultured with HepG2 cells at a 10:1 ratio (50,000 T cells to 5,000 HepG2 cells). Prior to incubation with T cells, HepG2 cells were labeled with Cr51 at 37°C for 1 hour. Cocultures of human T cells and HepG2 cells in the presence of each BsAb were kept in an incubator (37°C, 5% CO2) for 4 hours before being centrifuged at 800 × g for 10 minutes. The supernatants were transferred to microtubes and read in a scintillation counter. BsAbs #3 and #1 showed similar EC50 values, followed by #2 and #5. BsAb4 showed the lowest EC50 value. BsAb#6, whose Fab targets CD33, was included as a negative control (HepG2 is a CD33-negative cancer). [Figure 34A] Figure 1 shows human T cell engraftment in HepG2 xenograft mice. Human T cells were transduced with luciferase lentivirus and expanded for 8 days in the presence of anti-CD3 / CD28 beads. Each HepG2 xenograft mouse received 2 × 10 T-luc cells. Bioluminescence of T-luc cells in treated mice was acquired using an IVIS instrument (Perkin Elmer) on days 1, 4, 7, and 10 after T-luc cell administration. Luciferin (0.3 mg / mouse intravenously in 100 μl PBS) was injected 5 minutes before imaging. One group of HepG2 xenograft mice received neither T-luc cells nor BsAb to obtain baseline values for bioluminescence. Bioluminescence analysis was performed using Living Image 2.60 software. Bioluminescence intensity correlates with the number of infiltrating T cells into the tumor site. BsAb#3 induced the highest number of T-luc cell engraftment into the HepG2 tumor site, followed by BsAb#1 and #2. The dose of BsAb affected T-luc cell engraftment, with 30 μg of BsAb#1 inducing higher T-luc infiltration than 3 μg of BsAb#1. [Figure 34B]Figure 1 shows human T cell engraftment in HepG2 xenograft mice. Human T cells were transduced with luciferase lentivirus and expanded for 8 days in the presence of anti-CD3 / CD28 beads. Each HepG2 xenograft mouse received 2 × 10 T-luc cells. Bioluminescence of T-luc cells in treated mice was acquired using an IVIS instrument (Perkin Elmer) on days 1, 4, 7, and 10 after T-luc cell administration. Luciferin (0.3 mg / mouse intravenously in 100 μl PBS) was injected 5 minutes before imaging. One group of HepG2 xenograft mice received neither T-luc cells nor BsAb to obtain baseline values for bioluminescence. Bioluminescence analysis was performed using Living Image 2.60 software. Bioluminescence intensity correlates with the number of infiltrating T cells into the tumor site. BsAb#3 induced the highest number of T-luc cell engraftment into the HepG2 tumor site, followed by BsAb#1 and #2. The dose of BsAb affected T-luc cell engraftment, with 30 μg of BsAb#1 inducing higher T-luc infiltration than 3 μg of BsAb#1. DETAILED DESCRIPTION OF THE INVENTION
[0027] Certain aspects, modes, embodiments, variations and features of the present methods are described below in varying levels of detail to provide a substantial understanding of the present technology. The present disclosure generally provides immunoglobulin-related compositions (e.g., antibodies or antigen-binding fragments thereof), which can specifically bind to a CD3 polypeptide. The immunoglobulin-related compositions of the present technology are useful in methods for detecting or treating a CD3-associated pathology in a subject in need thereof. Accordingly, various aspects of the present methods relate to the preparation, characterization, and manipulation of anti-CD3 antibodies. The immunoglobulin-related compositions of the present technology are useful alone or in combination with additional therapeutic agents for treating cancer or autoimmune diseases. In some embodiments, the immunoglobulin-related composition is a monoclonal antibody, a humanized antibody, a chimeric antibody, a bispecific antibody, or a multispecific antibody.
[0028] In carrying out the present methods, many conventional techniques in molecular biology, protein biochemistry, cell biology, immunology, microbiology and recombinant DNA are used. For example, Sambrook and Russell eds. (2001) Molecular Cloning: A Laboratory Manual, 3rd edition; the series Ausubel et al. eds. (2007) Current Protocols in Molecular Biology; the series Methods in Enzymology (Academic Press, Inc., NY); MacPherson et al. (1991) PCR 1: A Practical Approach (IRL Press at Oxford University Press); MacPherson et al. (1995) PCR 2: A Practical Approach;Harlow and Lane eds. (1999) Antibodies, A Laboratory Manual;Freshney (2005) Culture of Animal Cells: A Manual of Basic Technique, 5th edition;Gait ed. (1984) Oligonucleotide Synthesis;US Patent No. 4,683,195;Hames and Higgins eds. (1984) Nucleic Acid Hybridization;Anderson (1999) Nucleic Acid Hybridization;Hames and Higgins eds. (1984) Transcription and Translation;Immobilized Cells and Enzymes (IRL Press (1986));Perbal (1984) A Practical Guide to Molecular Cloning;Miller and Calos eds.See, for example, (1987) Gene Transfer Vectors for Mammalian Cells (Cold Spring Harbor Laboratory); Makrides ed. (2003) Gene Transfer and Expression in Mammalian Cells; Mayer and Walker eds. (1987) Immunochemical Methods in Cell and Molecular Biology (Academic Press, London); and Herzenberg et al. eds. (1996) Weir's Handbook of Experimental Immunology. Methods for detecting and measuring levels of polypeptide gene expression products (e.g., gene translation levels) are well known in the art and include the use of polypeptide detection methods such as antibody detection and quantification techniques (see also Strachan & Read, Human Molecular Genetics, Second Edition (John Wiley and Sons, Inc., NY, 1999)).
[0029] definition Unless otherwise defined, all technical and scientific terms used herein generally have the same meaning as commonly understood by one of ordinary skill in the art to which this technology belongs. As used in this specification and the appended claims, the singular forms "a," "an," and "the" include plural referents unless the content clearly dictates otherwise. For example, reference to a "cell" includes a combination of two or more cells, and the like. Generally, the nomenclature used herein and the laboratory methods in cell culture, molecular genetics, organic chemistry, analytical and nucleic acid chemistry, and hybridization described below are those well known and commonly employed in the art.
[0030] As used herein, the term "about" in connection with a number generally includes numbers within 1%, 5%, or 10% in either direction of that number (more or less), unless otherwise stated or clear from the context (except where the number is less than 0% or more than 100% of a possible value). As used herein, "administration" of an agent or drug to a subject includes any route of introducing or delivering a compound to a subject to perform its intended function. Administration can be by any suitable route, including, but not limited to, orally, intranasally, parenterally (intravenously, intramuscularly, intraperitoneally, or subcutaneously), rectally, intrathecally, intratumorally, or topically. Administration includes self-administration and administration by another person. An "adjuvant" refers to one or more substances that cause stimulation of the immune system. In this context, adjuvants are used to enhance the immune response to one or more vaccine antigens or antibodies. Adjuvants can be administered to a subject prior to, in combination with, or after administration of a vaccine. Examples of chemical compounds used as adjuvants include aluminum compounds, oils, block polymers, immune stimulating complexes, vitamins and minerals (e.g., vitamin E, vitamin A, selenium, and vitamin B12), quill A (saponin), bacterial and fungal cell wall components (e.g., lipopolysaccharides, lipoproteins, and glycoproteins), hormones, cytokines, and costimulatory factors.
[0031] As used herein, the term "antibody" refers collectively to immunoglobulin or immunoglobulin-like molecules, including, by way of example and without limitation, IgA, IgD, IgE, IgG, and IgM, combinations thereof, and similar molecules produced during the immune response in any vertebrate, e.g., mammals such as humans, goats, rabbits, and mice, as well as non-mammalian species, such as shark immunoglobulins. As used herein, "antibodies" (including intact immunoglobulins) and "antigen-binding fragments" are molecules that specifically bind to a molecule of interest (or a group of highly similar molecules of interest) and have a binding constant of at least 10 for other molecules (e.g., the molecule of interest for other molecules in a biological sample). 3 M -1 times at least 10 4 M -1 times, or at least 10 5 M -1 Binding to antibodies and antibody fragments having binding constants that are 1-fold higher is substantially eliminated. The term "antibody" generally also includes genetically engineered forms such as chimeric antibodies (e.g., humanized murine antibodies), heteroconjugate antibodies (e.g., bispecific antibodies), etc. Pierce Catalog and Handbook, 1994-1995 (Pierce Chemical Co., Rockford, Ill.); Kuby, J., Immunology, 3 rd Ed., W.H. Freeman & Co., New York, 1997.
[0032] More specifically, an antibody is a polypeptide ligand containing at least a light chain immunoglobulin variable region or a heavy chain immunoglobulin variable region that specifically recognizes and binds to an epitope of an antigen. Antibodies are composed of heavy and light chains, each of which has a variable heavy (V) domain. H ) area and variable light (V L ) region. H Area and V LThese regions are responsible for binding to the antigen recognized by the antibody. Typically, immunoglobulins have heavy (H) and light (L) chains connected to each other by disulfide bonds. There are two types of light chains: lambda (λ) and kappa (κ). There are five major classes (or isotypes) of heavy chains that determine the functional activity of antibody molecules: IgM, IgD, IgG, IgA, and IgE. Each heavy and light chain contains a constant region and a variable region (these regions are also known as "domains"). In combination, the heavy and light chain variable regions specifically bind to antigens. The light and heavy chain variable regions contain a "framework" region interrupted by three hypervariable regions, also called "complementarity-determining regions" or "CDRs." The extent of the framework regions and CDRs has been defined (see Kabat et al., Sequences of Proteins of Immunological Interest, US Department of Health and Human Services, 1991, which is hereby incorporated by reference). The Kabat database is now maintained online. The sequences of framework regions of different light or heavy chains are relatively conserved within a species. The framework regions of antibodies, i.e., the combined framework regions of the constituent light and heavy chains, primarily adopt a β-sheet conformation, with the CDRs forming loops that connect, and in some cases form part of, the β-sheet structure. Thus, the framework regions serve to form a scaffold that provides proper orientation of the CDRs through interchain non-covalent interactions.
[0033] CDRs are primarily responsible for binding to an epitope of an antigen. The CDRs of each chain are typically referred to as CDR1, CDR2, and CDR3, are numbered sequentially starting from the N-terminus, and are also typically identified by the chain in which the particular CDR is located. Thus, V H CDR3 is located in the variable domain of the heavy chain of the antibody in which it is found, V LCDR1 is the CDR1 from the variable domain of the light chain of the antibody in which it is found. Antibodies that bind to the CD3 protein have a specific V H Area and V L Each antibody has a specific CDR sequence, and therefore a specific CDR sequence. Antibodies with different specificities (i.e., different binding sites for different antigens) have different CDRs. Although it is the CDRs that vary from antibody to antibody, only a limited number of amino acid positions within the CDRs are directly involved in antigen binding. These positions within the CDRs are called specificity-determining residues (SDRs). As used herein, "immunoglobulin-related compositions" refers to antibodies (e.g., monoclonal antibodies, polyclonal antibodies, humanized antibodies, chimeric antibodies, recombinant antibodies, multispecific antibodies, bispecific antibodies, etc.) as well as antibody fragments. An antibody or an antigen-binding fragment thereof specifically binds to an antigen.
[0034] As used herein, the term "antibody-related polypeptide" refers to an antigen-binding antibody fragment, e.g., a single-chain antibody, which can comprise a variable region alone or in combination with all or a portion of the following polypeptide elements: hinge region, CH1, CH2, and CH3 domains of an antibody molecule. Any combination of a variable region and hinge region, CH1, CH2, and CH3 domains is also encompassed by the present technology. Antibody-related molecules useful in the present methods include, for example, Fab, Fab' and F(ab')2, Fd, single-chain Fv (scFv), single-chain antibodies, disulfide-linked Fv (sdFv), and V L or V H Examples include, but are not limited to, (i) Fab fragments, V L , V H , C L and CH1 domains; (ii) F(ab')2 fragment, a bivalent fragment containing two Fab fragments linked by a disulfide bridge at the hinge region; (iii) V H and an Fd fragment consisting of the CH1 domain; (iv) a V of a single arm of an antibody L and V H (v) a dAb fragment (Ward et al., Nature 341: 544-546, 1989), which consists of the VH domains; and (vi) isolated complementarity-determining regions (CDRs). Thus, an "antibody fragment" or "antigen-binding fragment" can include a portion of a full-length antibody, generally the antigen-binding or variable region thereof. Examples of antibody fragments or antigen-binding fragments include Fab, Fab', F(ab')2, and Fv fragments; diabodies; linear antibodies; single-chain antibody molecules; and multispecific antibodies formed from antibody fragments.
[0035] A "bispecific antibody" or "BsAb," as used herein, refers to an antibody that can simultaneously bind to two targets with distinct structures, e.g., two different target antigens, two different epitopes on the same target antigen, or a hapten and a target antigen or an epitope on a target antigen. A wide variety of different bispecific antibody structures are known in the art. In some embodiments, each antigen-binding portion in a bispecific antibody is V H and / or V L In some such embodiments, the V H and / or V L The V region is a region found in a particular monoclonal antibody. In some embodiments, a bispecific antibody contains two antigen-binding portions, each derived from a different monoclonal antibody. H and / or V L In some embodiments, the bispecific antibody comprises two antigen-binding moieties, one of which comprises a V region containing the CDRs from the first monoclonal antibody. H and / or V L The other antigen-binding portion comprises an immunoglobulin molecule having a V region containing CDRs from a second monoclonal antibody. H and / or V L These include antibody fragments having regions (e.g., Fab, F(ab'), F(ab')2, Fd, Fv, dAB, scFv, etc.).
[0036] As used herein, the term "conjugated" refers to the bonding of two molecules by any method known to those skilled in the art. Suitable types of bonding include chemical and physical bonding. Chemical bonding includes, for example, covalent and coordinate bonding. Physical bonding includes, for example, hydrogen bonding, dipole-dipole interactions, van der Waals forces, electrostatic interactions, hydrophobic interactions, and aromatic stacking. As used herein, the term "diabody" refers to a small antibody fragment with two antigen-binding sites, which are bound to the same polypeptide chain (V H V L ) in the light chain variable domain (V L ) connected to the heavy chain variable domain (V H ). By using a linker that is too short to allow pairing between the two domains on the same chain, the domains are forced to pair with the complementary domains on another chain and create two antigen-binding sites. Diabodies are more fully described in, for example, EP 404,097; WO 93 / 11161; and Hollinger et al., Proc. Natl. Acad. Sci. USA, 90: 6444-6448 (1993).
[0037] As used herein, the term "single chain antibody" or "single chain Fv (scFv)" refers to a single chain antibody comprising two domains of an Fv fragment, V L and V H A single-chain antibody molecule may comprise a polymer having several individual molecules, for example, a dimer, trimer, or other polymer. Furthermore, the two domains of the Fv fragment, V L and V H are encoded by separate genes, but V L and V HRecombinant methods can be used to join the two domains by a synthetic linker that allows the regions to be produced as a single protein chain that pairs to form a monovalent molecule, known as a single-chain Fv (scFv). Bird et al. (1988) Science 242:423-426 and Huston et al. (1988) Proc. Natl. Acad Sci. USA 85:5879-5883. Such single-chain antibodies can be prepared by recombinant techniques or by enzymatic or chemical cleavage of intact antibodies. Any of the above antibody fragments are obtained using conventional techniques known to those with skill in the art, and the fragments are screened for binding specificity and neutralizing activity in the same manner as are intact antibodies.
[0038] As used herein, an "antigen" refers to a molecule to which an antibody (or antigen-binding fragment thereof) can selectively bind. A target antigen may be a protein, carbohydrate, nucleic acid, lipid, hapten, or other naturally occurring or synthetic compound. In some embodiments, a target antigen may be a polypeptide (e.g., a CD3 polypeptide). An antigen may be administered to an animal to generate an immune response in the animal. The term "antigen-binding fragment" refers to a fragment of the entire immunoglobulin structure that contains the portion of the polypeptide responsible for binding to the antigen. Examples of antigen-binding fragments useful in the present technology include, but are not limited to, scFv, (scFv)2, scFvFc, Fab, Fab', and F(ab')2. "Binding affinity" refers to the strength of all non-covalent interactions between a single binding site of a molecule (e.g., an antibody) and its binding partner (e.g., an antigen or antigenic peptide). The affinity of a molecule X for its partner Y is generally measured by the dissociation constant (K D ) Affinity can be measured by standard methods known in the art, including those described herein. Low affinity complexes generally contain antibodies that tend to dissociate easily from the antigen, while high affinity complexes generally contain antibodies that tend to remain bound to the antigen for longer periods of time.
[0039] As used herein, the term "biological sample" refers to a sample material derived from living cells. Biological samples can include tissues, cells, cell protein or membrane extracts, and biological fluids (e.g., ascites fluid or cerebrospinal fluid (CSF)) isolated from a subject, as well as tissues, cells, and biological fluids present within a subject. Biological samples of the present technology include, but are not limited to, samples taken from breast tissue, kidney tissue, cervix, endometrium, head or neck, gallbladder, parotid tissue, prostate, brain, pituitary gland, liver tissue, muscle, esophagus, stomach, small intestine, colon, liver, spleen, pancreas, thyroid tissue, heart tissue, lung tissue, bladder, adipose tissue, lymph node tissue, uterus, ovarian tissue, adrenal tissue, testicular tissue, tonsil, thymus, blood, hair, buccal, skin, serum, plasma, CSF, semen, prostatic fluid, seminal plasma, urine, feces, sweat, saliva, sputum, mucus, bone marrow, lymph, and tears. Biological samples can also be obtained from biopsies of internal organs or from cancer. Biological samples can be obtained from subjects for diagnostic or research purposes, or from non-diseased individuals as controls or for basic research. Samples can be obtained by standard methods, including, for example, venipuncture and surgical biopsy. In certain embodiments, the biological sample is a tissue sample obtained by needle biopsy.
[0040] As used herein, the term "CDR-grafted antibody" means an antibody in which at least one CDR of an "acceptor" antibody has been replaced with a CDR "graft" from a "donor" antibody with the desired antigen specificity. As used herein, the term "chimeric antibody" means an antibody in which the Fc constant region of a monoclonal antibody from one species (e.g., a murine Fc constant region) has been replaced, using recombinant DNA techniques, with the Fc constant region from an antibody of another species (e.g., a human Fc constant region). See generally Robinson et al., International Application PCT / US86 / 02269; Akira et al., European Patent Application Publication No. 184,187; Taniguchi, European Patent Application Publication No. 171,496; Morrison et al., European Patent Application Publication No. 173,494; Neuberger et al., International Patent Application Publication No. WO 86 / 01533; Cabilly et al., U.S. Pat. No. 4,816,567; Cabilly et al., European Patent Application Publication No. 0125,023; Better et al., Science 240: 1041-1043, 1988; Liu et al., Proc. Natl. Acad. Sci. USA 84: 3439-3443, 1987; Liu et al., J. Immunol 139: 3521-3526, 1987; Sun et al., Proc. Natl. Acad. Sci. USA 84: 214-218, 1987; Nishimura et al., Cancer Res 47: 999-1005, 1987; Wood et al., Nature 314: 446-449, 1985; and Shaw et al., J. Natl. Cancer Inst. 80: 1553-1559, 1988.
[0041] As used herein, the term "consensus FR" refers to the framework (FR) antibody region in the consensus immunoglobulin sequence. The FR region of an antibody does not contact the antigen. As used herein, the term "control" refers to another sample used in an experiment for comparison purposes. A control can be "positive" or "negative." For example, if the purpose of an experiment is to determine the correlation of the effectiveness of a therapeutic agent for treating a particular type of disease, a positive control (a compound or composition known to exhibit the desired therapeutic effect) and a negative control (a subject or sample that does not receive treatment or receives a placebo) are typically used. As used herein, the term "effective amount" refers to an amount sufficient to achieve the desired therapeutic and / or prophylactic effect, e.g., an amount that results in the prevention or reduction of a disease or condition described herein or one or more signs or symptoms associated with a disease or condition described herein. In the context of therapeutic or prophylactic applications, the amount of a composition administered to a subject will vary depending on the composition, the extent, type, and severity of the disease, and individual characteristics such as general health, age, sex, weight, and tolerance to drugs. Those skilled in the art will be able to determine appropriate dosages depending on these and other factors. The composition can also be administered in combination with one or more additional therapeutic compounds. In the methods described herein, a therapeutic composition may be administered to a subject with one or more signs or symptoms of a disease or condition described herein. As used herein, a "therapeutically effective amount" of a composition refers to a level of the composition at which the physiological effects of the disease or condition are ameliorated or eliminated. A therapeutically effective amount can be administered in one or more administrations.
[0042] As used herein, the term "effector cell" refers to an immune cell that is involved in the effector phase of an immune response, as opposed to the recognition and activation phase of an immune response. Exemplary immune cells include cells of myeloid or lymphoid origin, such as lymphocytes (e.g., B cells and T cells, including cytolytic T cells (CTLs)), killer cells, natural killer cells, macrophages, monocytes, eosinophils, neutrophils, polymorphonuclear cells, granulocytes, mast cells, and basophils. Effector cells express specific Fc receptors and perform specific immune functions. Effector cells can induce antibody-dependent cell-mediated cytotoxicity (ADCC), e.g., neutrophils can induce ADCC. For example, monocytes, macrophages, neutrophils, eosinophils, and lymphocytes that express FcαR are involved in the specific killing of target cells and antigen presentation to other components of the immune system, or binding to cells that present antigens.
[0043] As used herein, the term "epitope" refers to a protein determinant capable of specific binding to an antibody. Epitopes typically consist of chemically active surface groupings of molecules such as amino acids or sugar side chains and typically have specific three-dimensional structural and charge characteristics. Conformational and nonconformational epitopes are distinguished in that the binding to the former but not the latter is lost in the presence of denaturing solvents. In some embodiments, the "epitope" of the CD3 protein is the region of the protein to which the anti-CD3 antibody of the present technology specifically binds. In some embodiments, the epitope is a conformational epitope or a nonconformational epitope. To screen for anti-CD3 antibodies that bind to an epitope, a routine cross-blocking assay, such as that described in "Antibodies, A Laboratory Manual," Cold Spring Harbor Laboratory, Ed Harlow and David Lane (1988), can be performed. This assay can be used to determine whether an anti-CD3 antibody binds to the same site or epitope as the anti-CD3 antibody of the present technology. Alternatively, or in addition, epitope mapping can be performed by methods known in the art. For example, the antibody sequence can be mutagenized, e.g., by alanine scanning, to identify contact residues. In a different method, peptides corresponding to different regions of the CD3 protein can be used in competition assays with a test antibody, or with a test antibody and an antibody with a characterized or known epitope.
[0044] As used herein, "expression" includes one or more of the following: transcription of a gene into precursor mRNA; splicing and other processing of precursor mRNA to produce mature mRNA; mRNA stability; translation of mature mRNA into protein (including codon usage and tRNA availability); and glycosylation and / or other modifications of the translation product as necessary for proper expression and function. As used herein, the term "gene" refers to a segment of DNA that contains all the information for the regulated biosynthesis of an RNA product, including promoters, exons, introns, and other untranslated regions that control expression.
[0045] "Homology" or "identity" or "similarity" refers to the sequence similarity between two peptides or two nucleic acid molecules. Homology can be determined by comparing positions in each sequence, which can be aligned for comparison purposes. If a position in the compared sequences is occupied by the same base or amino acid, the molecules are homologous at that position. The degree of homology between sequences is a function of the number of matching or homologous positions shared by the sequences. A polynucleotide or polynucleotide region (or polypeptide or polypeptide region) having a certain percentage (e.g., at least 60%, 65%, 70%, 75%, 80%, 85%, 90%, 95%, 98%, or 99%) of "sequence identity" to another sequence means that, when aligned, a percentage of the bases (or amino acids) are the same in the two sequences. This alignment and percent homology or sequence identity can be determined using software programs known in the art. In some embodiments, default parameters are used for the alignment. One alignment program is BLAST, using default parameters. In particular, the programs are BLASTN and BLASTP, using the following default parameters: genetic code = standard; filter = none; strand = both; cutoff = 60; expect = 10; matrix = BLOSUM62; description = 50 sequences; sort by = high score; database = non-redundant, GenBank + EMBL + DDBJ + PDB + GenBank CDS translation + SwissProtein + SPupdate + PIR. Details of these programs can be found at the National Center for Biotechnology Information. Biologically equivalent polynucleotides are those that share a specified percent homology and encode polypeptides with the same or similar biological activity. Two sequences are considered "unrelated" or "non-homologous" if they share less than 40% identity or less than 25% identity with each other.
[0046] As used herein, "humanized" forms of non-human (e.g., murine) antibodies are chimeric antibodies that contain minimal sequence derived from non-human immunoglobulin. For the most part, humanized antibodies are human immunoglobulins in which hypervariable region residues of the recipient are replaced by hypervariable region residues from a non-human species (donor antibody) such as mouse, rat, rabbit, or non-human primate possessing the desired specificity, affinity, and capacity. In some embodiments, Fv framework region (FR) residues of the human immunoglobulin are replaced by corresponding non-human residues. Furthermore, humanized antibodies may comprise residues that are not found in either the recipient antibody or the donor antibody. These modifications are made to further refine antibody performance, such as binding affinity. Generally, a humanized antibody will comprise substantially all of at least one, and typically two, variable domains (e.g., Fab, Fab', F(ab')2, or Fv), in which all or substantially all of the hypervariable loops correspond to those of a non-human immunoglobulin and all or substantially all of the FR regions are those of a human immunoglobulin consensus FR sequence, although the FR regions may contain one or more amino acid substitutions that improve binding affinity. The number of these amino acid substitutions in the FRs will typically be no more than six in the H chain and no more than three in the L chain. The humanized antibody may also optionally comprise at least a portion of an immunoglobulin constant region (Fc), typically that of a human immunoglobulin. For further details, see Jones et al., Nature 321:522-525 (1986); Reichmann et al., Nature 332:323-329 (1988), and Presta, Curr. Op. Struct. Biol. 2:593-596 (1992). See, e.g., Ahmed & Cheung, FEBS Letters 588(2):288-297 (2014).
[0047] As used herein, the term "hypervariable region" refers to the amino acid residues of an antibody which are responsible for antigen binding. Hypervariable regions generally consist of amino acid residues from the "complementarity determining regions" or "CDRs" (e.g., V LIn the case of L1, approximately residues 24–34 (L1), 50–56 (L2), and 89–97 (L3), V H In the present study, approximately 31-35B (H1), 50-65 (H2), and 95-102 (H3) (Kabat et al., Sequences of Proteins of Immunological Interest, 5th Ed. Public Health Service, National Institutes of Health, Bethesda, MD. (1991)) and / or amino acid residues from the "hypervariable loops" (e.g., V L In the case of V, residues 26–32 (L1), 50–52 (L2), and 91–96 (L3) were H These include 26-32 (H1), 52A-55 (H2), and 96-101 (H3) (Chothia and Lesk J. Mol. Biol. 196:901-917 (1987)).
[0048] As used herein, the term "identical" or percent "identity" when used in the context of two or more nucleic acid or polypeptide sequences refers to two or more sequences or subsequences that are the same or have a specified percentage of amino acids or nucleotides that are the same (i.e., about 60%, 65%, 70%, 75%, 80%, 85%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, 99% or more identity over a specified region (e.g., nucleotide sequences encoding an antibody described herein or amino acid sequences of an antibody described herein)) when compared and aligned for maximum correspondence over a comparison window or designated region as measured using the BLAST or BLAST 2.0 sequence comparison algorithm with default parameters, as described below, or by manual alignment and visual inspection (e.g., on the NCBI website). The sequences are then said to be "substantially identical." The term also refers to, and can apply to, the complement of a test sequence. The term also includes sequences that have deletions and / or additions, as well as sequences that have substitutions. In some embodiments, identity exists over a region that is at least about 25 amino acids or nucleotides in length, or over a region that is 50-100 amino acids or nucleotides in length.
[0049] As used herein, the term "intact antibody" or "intact immunoglobulin" refers to an antibody having at least two heavy (H) chain polypeptides and two light (L) chain polypeptides inter-connected by disulfide bonds. Each heavy chain contains a heavy chain variable region (herein referred to as HCVR or VL). H The heavy chain constant region consists of three domains, CH1, CH2, and CH3. Each light chain contains a light chain variable region (herein abbreviated as LCVR or V). L The light chain constant region consists of one domain, C L V H and V LThe region can be further subdivided into regions of hypervariability, termed complementarity-determining regions (CDRs), interspersed with regions that are more conserved and termed framework regions (FRs). H and V L Each antibody is composed of three CDRs and four FRs, arranged from the amino terminus to the carboxyl terminus in the following order: FR1, CDR1, FR2, CDR2, FR3, CDR3, FR4. The variable regions of the heavy and light chains contain binding domains that interact with antigens. The constant region of an antibody can mediate the binding of the immunoglobulin to host tissues or factors, including various cells of the immune system (e.g., effector cells) and the first component (Clq) of the classical complement system. As used herein, the terms "individual," "patient," or "subject" can be an individual organism, a vertebrate, a mammal, or a human. In some embodiments, the individual, patient, or subject is a human.
[0050] As used herein, the term "monoclonal antibody" refers to an antibody obtained from a population of substantially homogeneous antibodies, i.e., the individual antibodies comprising the population are identical except for possible minor naturally occurring mutations. For example, a monoclonal antibody can be derived from a single clone, including any eukaryotic, prokaryotic, or phage clone, and not the method used to produce the monoclonal antibody. A monoclonal antibody composition exhibits a single binding specificity and affinity for a particular epitope. Monoclonal antibodies are highly specific, being directed against a single antigenic site. Furthermore, in contrast to conventional (polyclonal) antibody preparations that typically include different antibodies directed against different determinants (epitopes), each monoclonal antibody is directed against a single determinant on the antigen. The modifier "monoclonal" indicates the character of the antibody as being obtained from a substantially homogeneous population of antibodies and should not be construed as requiring production of the antibody by any particular method. Monoclonal antibodies can be prepared using a wide variety of techniques known in the art, including, but not limited to, hybridoma, recombinant, and phage display technologies. For example, the monoclonal antibodies to be used in accordance with the present methods may be made by the hybridoma method first described by Kohler et al., Nature 256:495 (1975), or may be made by recombinant DNA methods (see, e.g., U.S. Pat. No. 4,816,567). The "monoclonal antibodies" may also be isolated from phage antibody libraries using the techniques described in, e.g., Clackson et al., Nature 352:624-628 (1991) and Marks et al., J. Mol. Biol. 222:581-597 (1991).
[0051] As used herein, the term "pharmaceutically acceptable carrier" is intended to include any and all solvents, dispersion media, coatings, antibacterial and antifungal compounds, isotonic and absorption delaying compounds, and the like, that are compatible with pharmaceutical administration. Pharmaceutically acceptable carriers and their formulation are known to those skilled in the art and are described, for example, in Remington's Pharmaceutical Sciences (20 th edition, ed. A. Gennaro, 2000, Lippincott, Williams & Wilkins, Philadelphia, Pa.). As used herein, the term "polyclonal antibody" refers to a preparation of antibodies derived from at least two (2) different antibody-producing cell lines. Use of this term includes at least two (2) antibody preparations that contain antibodies that specifically bind to different epitopes or regions of an antigen. As used herein, the term "polynucleotide" or "nucleic acid" refers to any RNA or DNA, which may be unmodified or modified RNA or DNA. Polynucleotides include, but are not limited to, single- and double-stranded DNA, DNA that is a mixture of single- and double-stranded regions, single- and double-stranded RNA, RNA that is a mixture of single- and double-stranded regions, and hybrid molecules comprising DNA and RNA that may be single-stranded or, more typically, double-stranded or a mixture of single- and double-stranded regions. Additionally, polynucleotides refer to triple-stranded regions comprising RNA or DNA or both RNA and DNA. The term polynucleotide also includes DNA or RNA containing one or more modified bases and DNA or RNA with backbones modified for stability or for other reasons.
[0052] As used herein, the terms "polypeptide," "peptide," and "protein" are used interchangeably herein to refer to a polymer comprising two or more amino acids joined to each other by peptide bonds or modified peptide bonds, i.e., peptide isosteres. Polypeptides refer to both short chains, commonly referred to as peptides, glycopeptides, or oligomers, and to longer chains, generally referred to as proteins. Polypeptides can contain amino acids other than the 20 gene-encoded amino acids. Polypeptides include amino acid sequences modified either by natural processes, such as post-translational processing, or by chemical modification techniques that are well known in the art. Such modifications are fully explained in basic texts and in more detailed monographs, as well as in a voluminous research literature. As used herein, the term "recombinant," e.g., when used in reference to a cell, or a nucleic acid, protein, or vector, indicates that the cell, nucleic acid, protein, or vector has been modified by the introduction of a heterologous nucleic acid or protein or the alteration of a naturally occurring nucleic acid or protein, or that the material is derived from a cell so modified. Thus, for example, a recombinant cell expresses genes that are not found within the native (non-recombinant) form of the cell, or expresses naturally occurring genes that are otherwise aberrantly expressed, under-expressed, or not expressed at all.
[0053] As used herein, the term "separate" therapeutic use refers to the simultaneous or substantially simultaneous administration of at least two active ingredients by different routes. As used herein, the term "sequential" therapeutic use refers to the administration of at least two active ingredients at different times, with the administration routes being the same or different. More specifically, sequential use refers to the full administration of one of the active ingredients before the administration of the other or other active ingredients begins. Thus, it is possible to administer one of the active ingredients minutes, hours, or days before administering the other active ingredient(s). In this case, there is no simultaneous treatment.
[0054] As used herein, "specifically binds" refers to a molecule (e.g., an antibody or antigen-binding fragment thereof) that recognizes and binds to another molecule (e.g., an antigen) but does not substantially recognize or bind to other molecules. The terms "specific binding," "specifically binds to," or "is specific for" a particular molecule (e.g., a polypeptide, or an epitope on a polypeptide), as used herein, refer to, for example, a specific binding activity of about 10 to the molecule to which it binds. -4 M, about 10 -5 M, about 10 -6 M, about 10 -7 M, about 10 -8 M, about 10 -9 M, about 10 -10 M, about 10 -11 M, or about 10 -12 K of M D The term "specifically binds" can refer to binding when a molecule (e.g., an antibody or antigen-binding fragment thereof) binds to a particular polypeptide (e.g., a CD3 polypeptide) or an epitope on a particular polypeptide without substantially binding to any other polypeptides or polypeptide epitopes. As used herein, the term "simultaneous" therapeutic use refers to the administration of at least two active ingredients by the same route at the same time or at substantially the same time. As used herein, the term "therapeutic agent" is intended to mean a compound that, when present in an effective amount, produces a desired therapeutic effect in a subject in need thereof.
[0055] As used herein, "treating" or "treatment" encompasses the treatment of a disease or disorder described herein in a subject, such as a human, and includes (i) inhibiting the disease or disorder, i.e., halting its development; (ii) alleviating the disease or disorder, i.e., causing regression of the disorder; (iii) slowing the progression of the disorder; and / or (iv) inhibiting, alleviating, or slowing the progression of one or more symptoms of the disease or disorder. In some embodiments, treating means, for example, alleviating, reducing, curing, or putting into remission symptoms associated with the disease. It should also be recognized that the various treatment modalities for disorders described herein are intended to mean "substantial," which term includes total treatment, but also less than total treatment, in which some biologically or medically relevant result is achieved. Treatment may be continuous long-term treatment for chronic diseases or single or multiple doses for treatment of acute conditions.
[0056] Amino acid sequence modifications of the anti-CD3 antibodies described herein are contemplated. For example, it may be desirable to improve the binding affinity and / or other biological properties of the antibody. Amino acid sequence variants of anti-CD3 antibodies are prepared by introducing appropriate nucleotide changes into the antibody nucleic acid or by peptide synthesis. Such modifications include, for example, deletions from, and / or insertions into, and / or substitutions of, residues within the amino acid sequence of the antibody. Any combination of deletions, insertions, and substitutions can be made to obtain the desired antibody, as long as the resulting antibody possesses the desired properties. Modifications also include altering the glycosylation pattern of the protein. The most popular sites for substitutional mutagenesis include hypervariable regions, although FR changes are also contemplated. Conservative substitutions are shown in the table below.
[0057] [Table 1]
[0058] One type of substitutional variant involves substituting one or more hypervariable region residues of a parent antibody. A convenient method for generating such substitutional variants involves affinity maturation using phage display. Specifically, several hypervariable region sites (e.g., 6-7 sites) are mutated to generate all possible amino acid substitutions at each site. The antibody variants thus generated are displayed in a monovalent manner from filamentous phage particles as fusions to the M13 gene III product packaged within each particle. The phage-displayed variants are then screened for their biological activity (e.g., binding affinity) as disclosed herein. To identify candidate hypervariable region sites for modification, alanine scanning mutagenesis can be performed to identify hypervariable region residues that contribute significantly to antigen binding. Alternatively, or additionally, it may be beneficial to analyze a crystal structure of an antigen-antibody complex to identify contact points between the antibody and antigen. The contact residues and neighboring residues are candidates for substitution according to the techniques detailed herein. Once the variants are generated, the panel of variants can be subjected to screening as described herein and antibodies with similar or superior properties in one or more relevant assays can be selected for further development.
[0059] Immunoglobulin-related compositions of the present technology The present technology describes methods and compositions for the production and use of anti-CD3 immunoglobulin-related compositions (e.g., anti-CD3 antibodies or antigen-binding fragments thereof). The anti-CD3 immunoglobulin-related compositions of the present disclosure may be useful for the diagnosis or treatment of CD3-related conditions. Anti-CD3 immunoglobulin-related compositions within the scope of the present technology include, but are not limited to, monoclonal, chimeric, humanized, bispecific antibodies, and diabodies that specifically bind to a target polypeptide, homologs, derivatives, or fragments thereof. The present disclosure also provides antigen-binding fragments of any of the anti-CD3 antibodies disclosed herein, where the antigen-binding fragment is selected from the group consisting of Fab, F(ab)'2, Fab', scFv, and Fv. In one aspect, the present technology provides chimeric and re-humanized variants of teplizumab, including multispecific immunoglobulin-related compositions (e.g., bispecific antibody agents). The V of humanized CD3 antibodies based on the IMGT annotation system H and V L The CDRs are summarized below.
[0060] [Table 2] In one aspect, the present disclosure provides a heavy chain immunoglobulin variable domain (V H ) and light chain immunoglobulin variable domain (V L ), including (a) V H is GYTFTRYT V H CDR1 sequence (SEQ ID NO: 2), V of INPSRGYT H CDR2 sequence (SEQ ID NO: 3) and V of ARYYDDHYCLDY (SEQ ID NO: 4), ARYYDDHYSLDY (SEQ ID NO: 6), ARYYDDHYSCDY (SEQ ID NO: 134), ARYYDDHCSLDY (SEQ ID NO: 135), or ARYYDDHYSLCY (SEQ ID NO: 136). H and / or (b) V L V of SSVSY L CDR1 sequence (SEQ ID NO: 12), V of DT L CDR2 sequence (SEQ ID NO: 13), and V of QQWSSNPFT LAn antibody or antigen-binding fragment thereof is provided, comprising the CDR3 sequence (SEQ ID NO: 14).
[0061] In one aspect, the present disclosure provides a heavy chain immunoglobulin variable domain (V H ) and light chain immunoglobulin variable domain (V L ), including (a) V H comprises an amino acid sequence selected from any one of SEQ ID NOs: 5, 7, 8, 9, 10, or 43 to 61, and / or (b) V L provides an antibody or antigen-binding fragment thereof, comprising an amino acid sequence selected from any one of SEQ ID NOs: 15 to 20 or 62 to 91. In any of the above embodiments, the antibody further comprises an Fc domain of any isotype, for example, but not limited to, IgG (including IgG1, IgG2, IgG3, and IgG4), IgA (including IgA1 and IgA2), IgD, IgE, or IgM, and IgY. Non-limiting examples of constant region sequences include the following:
[0062] Human IgD constant region, Uniprot:P01880 (SEQ ID NO: 25) APTKAPDVFPIISGCRHPKDNSPVVLACLITGYHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWRQGEYKCVVQHTASKSKKEIFRWPESPKAQASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKATFTCFV VGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLPPQRLMALREPAAQAPVKLSLNLLASSDPPEAASWLLCEVSGFSPPNILLMWLEDQREVNTSGFAPARPPPQPGSTTFWAWSVLRVPAPPSPQPATYTCVVSHEDSRTLLNASRSLEVSYVTDHGPMK Human IgG1 constant region, Uniprot:P01857 (SEQ ID NO: 26) ASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGV EVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGK
[0063] Human IgG2 constant region, Uniprot:P01859 (SEQ ID NO: 27) ASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSNFGTQTYTCNVDHKPSNTKVDKTVERKCCVECPPCPAPPVAGPSVFLFPPKDTLMISRTPEVTCVVDVSHEDPEVQFNWYVDGVEV HNAKTKPREEQFNSTFRVVSVLTVVHQDWLNGKEYKCKVSNKGLPAPIEKTISKTKGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDISVEWESNGQPENNYKTTPPMLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGK Human IgG3 constant region, Uniprot:P01860 (SEQ ID NO: 28) ASTKGPSVFPLAPCSRSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYTCNVNHKPSNTKVDKRVELKTPLGDTTHTCPRCPEPKSCDTPPPCPRCPEPKSCDTPPPCPRCPEPKSCDTPPPCPRCPAPELLGGPSVFLFPPKPKDTLMISRTPE VTCVVVDVSHEDPEVQFKWYVDGVEVHNAKTKPREEQYNSTFRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKTKGQPREPQVYTLP PSREEMTKNQVSLTCLVKGFYPSDIAVEWESSGQPENNYNTTPPMLDSDGSFFLYSKLTVDKSRWQQGNIFSCSVMHEALHNRFTQKSLSLSPGK
[0064] Human IgM constant region, Uniprot:P01871 (SEQ ID NO: 29) GSASAPTLFPLVSCENSPSDTSSVAVGCLAQDFLPDSITLSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMQGTDEHVVCKVQHPNGNKEKNVPLPVIAELPPKV SVFVPPRDGFFGNPRKSKLICQATGFSPRQIQVSWLREGKQVGSGVTTDQVQAEAKESGPTTYKVTSTLTIKESDWLGQSMFTCRVDHRGLTFQQNASSMCVPDQDTAIRVFA IPPSFASIFLTKSTKLTCLVTDLTTYDSVTISWTRQNGEAVKTHTNISESHPNATFSAVGEASICEDDWNSGERFTCTVTHTDLPSPLKQTISRPKGVALHRPDVYLLPPARE QLNLRESATITCLVTGFSPADVFVQWMQRGQPLSPEKYVTSAPMPEPQAPGRYFAHSILTVSEEEWNTGETYTCVAHEALPNRVTERTVDKSTGKPTLYNVSLVMSDTAGTCY
[0065] Human IgG4 constant region, Uniprot:P01861 (SEQ ID NO: 30) ASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESKYGPPCPSCPAPEFLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSQEDPEVQFNWYVDGVE VHNAKTKPREEQFNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKGLPSSIEKTISKAKGQPREPQVYTLPPSQEEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSRLTVDKSRWQEGNVFSCSVMHEALHNHYTQKSLSLSLGK
[0066] Human IgA1 constant region, Uniprot:P01876 (SEQ ID NO: 31) ASPTSPKVFPLSLCSTQPDGNVVIACLVQGFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQDVTVPCPVPSTPPTPSPSTPPTPSPSCCHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTWTPSSGKSAVQGPPE RDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALPLAFTQKTIDRLAGKPTHVNVSVVMAEVDGTCY Human IgA2 constant region, Uniprot:P01877 (SEQ ID NO: 32) ASPTSPKVFPLSLDSTPQDGNVVVACLVQGFFPQEPLSVTWSESGQNVTARNFPPSQDASGDLYTTSSQLTLPATQCPDGKSVTCHVKHYTNPSQDVTVPCPVPPPPPCCHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGATFTWTPSSGKSAVQGPPERDLCGCY SVSSVLPGCAQPWNHGETFTCTAAHPELKTPLTANITKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALPLAFTQKTIDRMAGKPTHVNVSVVMAEVDGTCY Human Ig kappa constant region, Uniprot: P01834 (SEQ ID NO: 33) TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
[0067] In some embodiments, the immunoglobulin-related compositions of the present technology comprise a heavy chain constant region that is at least 80%, at least 85%, at least 90%, at least 95%, at least 99% identical, or 100% identical to SEQ ID NOs: 25-32. Additionally, or alternatively, in some embodiments, the immunoglobulin-related compositions of the present technology comprise a light chain constant region that is at least 80%, at least 85%, at least 90%, at least 95%, at least 99% identical, or 100% identical to SEQ ID NO: 33. In some embodiments, the immunoglobulin-related compositions of the present technology bind to the extracellular domain of a CD3 polypeptide. In certain embodiments, the epitope is a conformational epitope or a non-conformational epitope. In some embodiments, the CD3 polypeptide has the amino acid sequence of SEQ ID NO: 42.
[0068] NCBI Ref: NP_000724.1 Homo sapiens T-cell surface glycoprotein CD3 epsilon chain precursor (SEQ ID NO: 42). MQSGTHWRVLGLCLLSVGVWGQDGNEEMGGITQTPYKVSISGTTVILTCPQYPGSEILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGS KPEDANFYLYLRARVCENCMEMDVMSVATIVIVDICITGGLLLLVYYWSKNRKAKAKPVTRGAGAGGRQRGQNKERPPPVPNPDYEPIRKGQRDLYSGLNQRRI Additionally or alternatively, in some embodiments, the antibody or antigen-binding fragment binds to the extracellular domain of a CD3 polypeptide. In certain embodiments, the extracellular domain comprises a CD3ε subunit comprising a linear stretch of sequence on the FG loop. In some embodiments, the CD3ε subunit may comprise three discontinuous regions: residues 79ε to 85ε (FG loop), residue 34ε (the first residue of the βC strand), and residues 46ε and 48ε (C'-D loop).
[0069] In another aspect, the present disclosure provides an isolated immunoglobulin-related composition (e.g., an antibody or antigen-binding fragment thereof) comprising a heavy chain (HC) amino acid sequence comprising SEQ ID NO: 23, SEQ ID NO: 96, SEQ ID NO: 100, SEQ ID NO: 104, SEQ ID NO: 108, SEQ ID NO: 112, SEQ ID NO: 116, SEQ ID NO: 126, SEQ ID NO: 132, SEQ ID NO: 137, SEQ ID NO: 139, or a variant thereof having one or more conservative amino acid substitutions. Additionally or alternatively, in some embodiments, the immunoglobulin-related composition of the present technology comprises a light chain (LC) amino acid sequence comprising SEQ ID NO: 21, SEQ ID NO: 92, SEQ ID NO: 94, SEQ ID NO: 98, SEQ ID NO: 102, SEQ ID NO: 106, SEQ ID NO: 110, SEQ ID NO: 114, SEQ ID NO: 122, SEQ ID NO: 124, SEQ ID NO: 128, SEQ ID NO: 130, or a variant thereof having one or more conservative amino acid substitutions. In some embodiments, the immunoglobulin-related compositions of the present technology comprise an HC amino acid sequence and an LC amino acid sequence selected from the group consisting of SEQ ID NO:23 and SEQ ID NO:21, SEQ ID NO:23 and SEQ ID NO:92, SEQ ID NO:96 and SEQ ID NO:94, SEQ ID NO:100 and SEQ ID NO:98, SEQ ID NO:104 and SEQ ID NO:102, SEQ ID NO:108 and SEQ ID NO:106, SEQ ID NO:112 and SEQ ID NO:110, and SEQ ID NO:116 and SEQ ID NO: 114. Additionally, or alternatively, in some embodiments, the immunoglobulin-related compositions comprise a first LC amino acid sequence, a second LC amino acid sequence, a first HC amino acid sequence, and a second HC amino acid sequence selected from the group consisting of SEQ ID NO:122, SEQ ID NO:124, SEQ ID NO:126, and SEQ ID NO:137, and SEQ ID NO:128, SEQ ID NO:130, SEQ ID NO:132, and SEQ ID NO:139, respectively.
[0070] In any of the above embodiments of the immunoglobulin-related composition, the HC and LC immunoglobulin variable domain sequences form an antigen-binding site that binds to the extracellular domain of the CD3 polypeptide. In certain embodiments, the extracellular domain comprises a CD3ε subunit that includes a linear stretch of sequence on the FG loop. In some embodiments, the CD3ε subunit can include three discontinuous regions: residues 79ε to 85ε (FG loop), residue 34ε (the first residue of the βC strand), and residues 46ε and 48ε (C'-D loop). In some embodiments, the epitope is a conformational epitope or a nonconformational epitope. In some embodiments, the HC and LC immunoglobulin variable domain sequences are components of the same polypeptide chain. In other embodiments, the HC and LC immunoglobulin variable domain sequences are components of different polypeptide chains. In certain embodiments, the antibody is a full-length antibody. In some embodiments, the immunoglobulin-related compositions of the present technology specifically bind to at least one CD3 polypeptide. In some embodiments, the immunoglobulin-related compositions of the present technology specifically bind to at least one CD3 polypeptide. -3 M, 10 -4 M, 10 -5 M, 10 -6 M, 10 -7 M, 10 -8 M, 10 -9 M, 10 -10 M, 10 -11 M or 10 -12 Dissociation constant of M (K D ) binds at least one CD3 polypeptide. In certain embodiments, the immunoglobulin-related composition is a monoclonal antibody, a chimeric antibody, a humanized antibody, a bispecific antibody, or a multispecific antibody. In some embodiments, the antibody comprises a human antibody framework region.
[0071] In certain embodiments, the immunoglobulin-related compositions comprise one or more of the following characteristics: (a) a light chain immunoglobulin variable domain sequence that is at least 80%, at least 85%, at least 90%, at least 95%, or at least 99% identical to the light chain immunoglobulin variable domain sequence of any one of SEQ ID NOs: 15-20, or 62-91, and / or (b) a heavy chain immunoglobulin variable domain sequence that is at least 80%, at least 85%, at least 90%, at least 95%, or at least 99% identical to the heavy chain immunoglobulin variable domain sequence of any one of SEQ ID NOs: 5, 7, 8, 9, 10, or 43-61. In another aspect, one or more amino acid residues in the immunoglobulin-related compositions provided herein are substituted with another amino acid. The substitution may be a "conservative substitution," as defined herein. In one aspect, the present disclosure provides an immunoglobulin-related composition comprising an amino acid sequence that is at least 80%, at least 85%, at least 90%, at least 95%, or at least 99% identical to an amino acid sequence selected from SEQ ID NOs: 118-121.
[0072] In another aspect, the disclosure provides an antibody comprising (a) an LC sequence that is at least 80%, at least 85%, at least 90%, at least 95%, or at least 99% identical to the LC sequence present in SEQ ID NO:21, SEQ ID NO:92, SEQ ID NO:94, SEQ ID NO:98, SEQ ID NO:102, SEQ ID NO:106, SEQ ID NO:110, SEQ ID NO:114, SEQ ID NO:122, SEQ ID NO:124, SEQ ID NO:128, SEQ ID NO:130, and / or (b) an HC sequence that is at least 80%, at least 85%, at least 90%, at least 95%, or at least 99% identical to the HC sequence present in SEQ ID NO:23, SEQ ID NO:96, SEQ ID NO:100, SEQ ID NO:104, SEQ ID NO:108, SEQ ID NO:112, SEQ ID NO:116, SEQ ID NO:126, SEQ ID NO:132, SEQ ID NO:137, or SEQ ID NO:139.
[0073] Additionally, or alternatively, in some embodiments, the multispecific antibodies of the present disclosure may be directed to any of the following: CD3, GPA33, HER2 / neu, GD2, MAGE-1, MAGE-3, BAGE, GAGE-1, GAGE-2, MUM-1, CDK4, N-acetylglucosamine transferase, p15, gp75, beta-catenin, ErbB2, cancer antigen 125 (CA-125), carcinoembryonic antigen (CEA), RAGE, MART (melanoma antigen), MUC-1, MUC-2, MUC-3, MUC-4, MUC-5ac, MUC-16, MUC-17, tyrosinase, Pmel 17 (gp100), GnT-V intron V sequence (N-acetylglucosamine transferase V intron V sequence), prostate cancer psm, PRAME (melanoma antigen), β-catenin, EBNA (Epstein-Barr virus nuclear antigen) 1-6, LMP2, p53, lung resistance protein (LRP), Bcl-2, prostate-specific antigen (PSA), Ki-67, CEACAM6, colon-specific antigen-p (CSA p), HLA-DR, CD40, CD74, CD138, EGFR, EGP-1, EGP-2, VEGF, PlGF, insulin-like growth factor (ILGF), tenascin, platelet-derived growth factor, IL-6, CD20, CD19, PSMA, CD33, CD123, MET, DLL4, Ang-2, HER3, IGF-1R, CD30, TAG-72, SPEAP, CD45, L1-CAM, Lewis Y (Le y ) antigens, E-cadherin, V-cadherin, GPC3, EpCAM, CD4, CD8, CD21, CD23, CD46, CD80, HLA-DR, CD74, CD22, CD14, CD15, CD16, CD123, TCR gamma / delta, NKp46, KIR, CD56, DLL3, PD-1, PD-L1, CD28, CD137, CD99, globo H, CD24, STEAP1, B7H3, polysialic acid, OX40, OX40-ligand, peptide-MHC complexes (with peptides derived from TP53, KRAS, MYC, EBNA1-6, PRAME, MART, tyrosinase, MAGEA1-A6, pmel17, LMP2, or WT1), or small molecule DOTA haptens.
[0074] In one aspect, the present disclosure provides a multispecific antigen-binding fragment comprising a first peptide chain, the first peptide chain comprising, from N-terminal to C-terminal: (i) a heavy chain variable domain of a first immunoglobulin capable of specifically binding to a first epitope, (ii) a flexible peptide linker comprising the amino acid sequence (GGGGS)6, (iii) a light chain variable domain of the first immunoglobulin, (iv) a flexible peptide linker comprising the amino acid sequence (GGGGS)4, (v) a heavy chain variable domain of a second immunoglobulin capable of specifically binding to a second epitope, and (vi) a flexible peptide linker comprising the amino acid sequence (GGGGS)6. (vii) a light chain variable domain of the second immunoglobulin; (viii) a flexible peptide linker sequence comprising the amino acid sequence TPLGDTTHT; and (ix) a self-assembly degradation (SADA) polypeptide, wherein the heavy chain variable domain of the first immunoglobulin or the heavy chain variable domain of the second immunoglobulin is selected from any one of SEQ ID NOs: 5, 7, 8, 9, 10, or 43 to 61, and / or the light chain variable domain of the first immunoglobulin or the light chain variable domain of the second immunoglobulin is selected from any one of SEQ ID NOs: 15 to 20, or 62 to 91.
[0075] In another aspect, the present disclosure provides a multispecific antigen-binding fragment comprising a first peptide chain, the first peptide chain comprising, from N-terminal to C-terminal: (i) a light chain variable domain of a first immunoglobulin capable of specifically binding to a first epitope, (ii) a flexible peptide linker comprising the amino acid sequence (GGGGS)6, (iii) a heavy chain variable domain of the first immunoglobulin, (iv) a flexible peptide linker comprising the amino acid sequence (GGGGS)4, (v) a heavy chain variable domain of a second immunoglobulin capable of specifically binding to a second epitope, and (vi) a flexible peptide linker comprising the amino acid sequence (GGGGS)6. (vii) a light chain variable domain of the second immunoglobulin; (viii) a flexible peptide linker sequence comprising the amino acid sequence TPLGDTTHT; and (ix) a self-assembly degradation (SADA) polypeptide, wherein the heavy chain variable domain of the first immunoglobulin or the heavy chain variable domain of the second immunoglobulin is selected from any one of SEQ ID NOs: 5, 7, 8, 9, 10, or 43 to 61, and / or the light chain variable domain of the first immunoglobulin or the light chain variable domain of the second immunoglobulin is selected from any one of SEQ ID NOs: 15 to 20, or 62 to 91.
[0076] In certain embodiments of the bispecific antigen-binding fragments disclosed herein, the SADA polypeptide comprises a tetramerization, pentamerization, or hexamerization domain. In some embodiments, the SADA polypeptide comprises the tetramerization domain of any one of p53, p63, p73, hnRNPC, SNA-23, Stefin B, KCNQ4, or CBFA2T1. Additionally or alternatively, in some embodiments, the bispecific antigen-binding fragment comprises an amino acid sequence selected from SEQ ID NOs: 118-121.
[0077] In one aspect, the disclosure provides a polypeptide comprising a first polypeptide chain, a second polypeptide chain, a third polypeptide chain, and a fourth polypeptide chain, wherein the first polypeptide chain and the second polypeptide chain are covalently linked to each other, the second polypeptide chain and the third polypeptide chain are covalently linked to each other, and the third polypeptide chain and the fourth polypeptide chain are covalently linked to each other, and wherein (a) the first polypeptide chain and the fourth polypeptide chain each comprise, from N-terminal to C-terminal: (i) a light chain variable domain of a first immunoglobulin capable of specifically binding to a first epitope, (ii) a light chain constant domain of the first immunoglobulin, (iii) a flexible peptide linker comprising the amino acid sequence (GGGGS)3, and (iv) a light chain variable domain of a second immunoglobulin linked to a complementary heavy chain variable domain of a second immunoglobulin, or a heavy chain variable domain of a second immunoglobulin linked to a complementary light chain variable domain of a second immunoglobulin. (b) a light chain variable domain or a heavy chain variable domain of a second immunoglobulin, the light chain and the heavy chain variable domain of the second immunoglobulin being capable of specifically binding to a second epitope and linked to each other by a flexible peptide linker comprising the amino acid sequence (GGGGS)6 to form a single-chain variable fragment; and (c) a light chain variable domain or a heavy chain variable domain of a second immunoglobulin, the light chain and the heavy chain variable domain of the second immunoglobulin being capable of specifically binding to a second epitope and linked to each other by a flexible peptide linker comprising the amino acid sequence (GGGGS)6 to form a single-chain variable fragment; and (ii) a heavy chain variable domain of said first immunoglobulin, wherein the heavy chain variable domain of said first immunoglobulin or the heavy chain variable domain of said second immunoglobulin is selected from any one of SEQ ID NOs: 5, 7, 8, 9, 10, or 43 to 61, and / or the light chain variable domain of said first immunoglobulin or the light chain variable domain of said second immunoglobulin is selected from any one of SEQ ID NOs: 15 to 20, or 62 to 91.
[0078] In certain embodiments, the immunoglobulin-related composition contains an IgG1 constant region comprising one or more amino acid substitutions selected from the group consisting of N297A and K322A. Additionally, or alternatively, in some embodiments, the immunoglobulin-related composition contains an IgG4 constant region comprising a S228P mutation. In some aspects, the anti-CD3 immunoglobulin-related compositions described herein contain structural modifications to promote rapid binding and cellular uptake and / or slow release. In some aspects, the anti-CD3 immunoglobulin-related compositions (e.g., antibodies) of the present technology may contain deletions in the CH2 constant heavy chain region to promote rapid binding and cellular uptake and / or slow release. In some aspects, Fab fragments are used to promote rapid binding and cellular uptake and / or slow release. In some aspects, F(ab)'2 fragments are used to promote rapid binding and cellular uptake and / or slow release. In one aspect, the present technology provides nucleic acid sequences encoding any of the immunoglobulin-related compositions described herein. Also disclosed herein are recombinant nucleic acid sequences encoding any of the antibodies described herein. In some embodiments, the nucleic acid sequence is selected from the group consisting of SEQ ID NOs: 22, 24, 93, 95, 97, 99, 101, 103, 105, 107, 109, 111, 113, 115, 117, 123, 125, 127, 129, 131, 133, 138, and 140. In another aspect, the technology provides host cells that express any nucleic acid sequence encoding any of the immunoglobulin-related compositions described herein.
[0079] The immunoglobulin-related compositions (e.g., anti-CD3 antibodies) of the present technology may be monospecific, bispecific, trispecific, or of greater multispecificity. Multispecific antibodies may be specific for different epitopes of one or more CD3 polypeptides, or may be specific for both a CD3 polypeptide and a heterologous composition such as a heterologous polypeptide or solid support material. See, for example, International Publication Nos. WO 93 / 17715, WO 92 / 08802, WO 91 / 00360, WO 92 / 05793, Tutt et al., J. Immunol. 147: 60-69 (1991), U.S. Patent Nos. 5,573,920, 4,474,893, 5,601,819, 4,714,681, 4,925,648, and 6,106,835, and Kostelny et al., J. Immunol. 148: 1547-1553 (1992). In some embodiments, the immunoglobulin-related composition is chimeric. In certain embodiments, the immunoglobulin-related composition is humanized.
[0080] The immunoglobulin-related compositions of the present technology can further be recombinantly fused to heterologous polypeptides at the N- or C-terminus, or chemically conjugated to polypeptides or other compositions (including covalent and non-covalent conjugation). For example, the immunoglobulin-related compositions of the present technology can be recombinantly fused to or conjugated to effector molecules such as molecules useful as labels in detection assays, heterologous polypeptides, drugs, or toxins. See, for example, WO 92 / 08495, WO 91 / 14438, WO 89 / 12624, U.S. Pat. No. 5,314,995, and EP 0 396 387. In any of the above embodiments of the immunoglobulin-related compositions of the present technology, the antibody or antigen-binding fragment may be conjugated to an agent selected from the group consisting of an isotope, a dye, a chromagen, an imaging agent, a drug, a toxin, a cytokine, an enzyme, an enzyme inhibitor, a hormone, a hormone antagonist, a growth factor, a radionuclide, a metal, a liposome, a nanoparticle, RNA, DNA, or any combination thereof. With respect to chemical or physical binding, a functional group on the immunoglobulin-related composition typically binds to a functional group on the agent. Alternatively, a functional group on the agent binds to a functional group on the immunoglobulin-related composition.
[0081] Functional groups on the agent and the immunoglobulin-related composition can be directly linked. For example, a functional group (e.g., a sulfhydryl group) on the agent can bond with a functional group (e.g., a sulfhydryl group) on the immunoglobulin-related composition to form a disulfide. Alternatively, functional groups can be linked through a cross-linking agent (i.e., a linker). Some examples of cross-linking agents are described below. The cross-linker can be attached to either the agent or the immunoglobulin-related composition. The number of agents or immunoglobulin-related compositions in a conjugate is also limited by the number of functional groups present on the other. For example, the maximum number of agents that can be linked to a conjugate depends on the number of functional groups present on the immunoglobulin-related composition. Alternatively, the maximum number of immunoglobulin-related compositions that can be linked to an agent depends on the number of functional groups present on the agent. In yet another embodiment, the conjugate comprises one immunoglobulin-related composition bound to one agent. In one embodiment, the conjugate comprises at least one agent chemically bound (e.g., conjugated) to at least one immunoglobulin-related composition. The agent can be chemically bound to the immunoglobulin-related composition by any method known to those skilled in the art. For example, a functional group on the agent can be directly bound to a functional group on the immunoglobulin-related composition. Some examples of suitable functional groups include amino, carboxyl, sulfhydryl, maleimide, isocyanate, isothiocyanate, and hydroxyl.
[0082] Agents can also be chemically linked to immunoglobulin-related compositions using cross-linking agents such as dialdehydes, carbodiimides, dimaleimides, and the like. Cross-linking agents can be obtained, for example, from Pierce Biotechnology, Rockford, Illinois. The Pierce Biotechnology website can provide assistance. Additional cross-linking agents include platinum cross-linkers described in U.S. Patent Nos. 5,580,990, 5,985,566, and 6,133,038 to Kreatech Biotechnology, BV, Amsterdam, The Netherlands. Alternatively, the functional groups on the agent and the immunoglobulin-related composition can be the same. Homobifunctional crosslinkers are typically used to crosslink identical functional groups. Examples of homobifunctional crosslinkers include EGS (i.e., ethylene glycol bis[succinimidyl succinate]), DSS (i.e., disuccinimidyl suberate), DMA (i.e., dimethyl adipimidate.2HCl), DTSSP (i.e., 3,3'-dithiobis[sulfosuccinimidyl propionate]), DPDPB (i.e., 1,4-di-[3'-(2'-pyridyldithio)-propionamido]butane), and BMH (i.e., bis-maleimidohexane). Such homobifunctional crosslinkers are also available from Pierce Biotechnology.
[0083] In other instances, it may be beneficial to cleave the agent from the immunoglobulin-associated composition. The Pierce Biotechnology website mentioned above can also provide assistance to those skilled in the art in selecting appropriate crosslinkers that can be cleaved, for example, by enzymes in the cell. Thus, the agent can be separated from the immunoglobulin-associated composition. Examples of cleavable linkers include SMPT (i.e., 4-succinimidyloxycarbonyl-methyl-α-[2-pyridyldithio]toluene), sulfo-LC-SPDP (i.e., sulfosuccinimidyl 6-(3-[2-pyridyldithio]-propionamido)hexanoate), LC-SPDP (i.e., succinimidyl 6-(3-[2-pyridyldithio]-propionamido)hexanoate), sulfo-LC-SPDP (i.e., sulfosuccinimidyl 6-(3-[2-pyridyldithio]-propionamido)hexanoate), SPDP (i.e., N-succinimidyl 3-[2-pyridyldithio]-propionamidohexanoate), and AEDP (i.e., 3-[2-aminoethyl)dithio]propionic acid HCl).
[0084] In another embodiment, the conjugate comprises at least one agent physically associated with at least one immunoglobulin-related composition. Any method known to those skilled in the art may be used to physically associate the agent with the immunoglobulin-related composition. For example, the immunoglobulin-related composition and the agent may be associated together by any method known to those skilled in the art. The order of mixing is not important. For example, the agent may be physically mixed with the immunoglobulin-related composition by any method known to those skilled in the art. For example, the immunoglobulin-related composition and the agent may be placed in a container and agitated, for example, by shaking the container, to mix the immunoglobulin-related composition and the agent. The immunoglobulin-related compositions can be modified by any method known to those of skill in the art, for example, the immunoglobulin-related compositions can be modified with cross-linking agents or functional groups, as described above.
[0085] A. Methods of Preparing Anti-CD3 Antibodies of the Present Technology Summary. First, a target polypeptide against which antibodies of the present technology can be produced is selected. For example, antibodies may be produced against the full-length CD3 protein or against a portion of the extracellular domain of the CD3 protein. Techniques for producing antibodies directed against the target polypeptide are well known to those skilled in the art. Examples of such techniques include, but are not limited to, display libraries, xeno- or human-mouse, hybridoma-related techniques, and the like. Target polypeptides within the scope of the present technology include any polypeptide derived from the CD3 protein that contains an extracellular domain capable of eliciting an immune response. In certain embodiments, the extracellular domain comprises the CD3ε subunit, which comprises a linear stretch of the sequence on the F-G loop. In some embodiments, the CD3ε subunit may comprise three discontinuous regions: residues 79ε to 85ε (F-G loop), residue 34ε (the first residue of the βC strand), and residues 46ε and 48ε (C'-D loop).
[0086] It should be understood that recombinantly engineered antibodies and antibody fragments, eg, antibody-related polypeptides, directed against the CD3 protein and fragments thereof are suitable for use in accordance with the present disclosure. Anti-CD3 antibodies amenable to the techniques described herein include monoclonal and polyclonal antibodies, as well as antibody fragments such as Fab, Fab', F(ab')2, Fd, scFv, diabodies, antibody light chains, antibody heavy chains, and / or antibody fragments. Methods useful for the high-yield production of antibody Fv-containing polypeptides, e.g., Fab' and F(ab')2 antibody fragments, have been described; see U.S. Patent No. 5,648,237. Generally, antibodies are obtained from an originating species. More specifically, the nucleic acid or amino acid sequence of the variable portion of the light chain, heavy chain, or both, of an originating species antibody having specificity for a target polypeptide antigen is obtained. The originating species may be any species that has been useful for producing antibodies or antibody libraries of the present technology, such as rat, mouse, rabbit, chicken, monkey, human, and the like. Phage or phagemid display technology is a useful technique for deriving the antibodies of the present technology. Techniques for producing and cloning monoclonal antibodies are well known to those skilled in the art. Expression of the sequence encoding the antibody of the present technology can be carried out in E. coli.
[0087] Due to the degeneracy of nucleic acid coding sequences, other sequences encoding substantially the same amino acid sequence as that of a naturally occurring protein can be used in the practice of this technology. These sequences include, but are not limited to, nucleic acid sequences comprising all or part of the nucleic acid sequence encoding the above polypeptide, where the nucleic acid sequence is altered by substituting different codons that encode functionally equivalent amino acid residues within the sequence, thus producing silent changes. It is recognized that the nucleotide sequence of immunoglobulins used in this technology can tolerate up to 25% sequence homology variation, as calculated by standard methods ("Current Methods in Sequence Comparison and Analysis," Macromolecule Sequencing and Synthesis, Selected Methods and Applications, pp. 127-149, 1998, Alan R. Liss, Inc.), as long as the variant forms an effective antibody that recognizes the CD3 protein. For example, one or more amino acid residues within a polypeptide sequence can be substituted with another amino acid of a similar polarity that serves as a functional equivalent, resulting in a silent alteration. Substitutes for an amino acid within the sequence can be selected from other members of the class to which the amino acid belongs. For example, nonpolar (hydrophobic) amino acids include alanine, leucine, isoleucine, valine, proline, phenylalanine, tryptophan, and methionine. Polar neutral amino acids include glycine, serine, threonine, cysteine, tyrosine, asparagine, and glutamine. Positively charged (basic) amino acids include arginine, lysine, and histidine. Negatively charged (acidic) amino acids include aspartic acid and glutamic acid. Also included within the scope of the present technology are proteins, or fragments or derivatives thereof, that are differentially modified during or after translation, for example, by glycosylation, proteolytic cleavage, linkage to antibody molecules or other cellular ligands, etc.Furthermore, immunoglobulin-encoding nucleic acid sequences can be mutated in vitro or in vivo to create and / or destroy translation sequences, initiation, and / or termination sequences, or to create variations in the coding region and / or create new or destroy pre-existing restriction endonuclease sites to facilitate further in vitro modifications. Any technique for mutagenesis known in the art can be used, including, but not limited to, in vitro site-directed mutagenesis, J. Biol. Chem. 253:6551, use of Tab linkers (Pharmacia), and the like.
[0088] Preparation of Polyclonal Antisera and Immunogens. Methods for producing antibodies or antibody fragments of the present technology typically involve immunizing a subject (generally a non-human subject, such as a mouse or rabbit) with purified CD3 protein or a fragment thereof or with cells expressing the CD3 protein or a fragment thereof. An appropriate immunogenic preparation can contain, for example, recombinantly expressed CD3 protein or a chemically synthesized CD3 peptide. Using the extracellular domain of the CD3 protein, or a portion or fragment thereof, as an immunogen, standard techniques for polyclonal and monoclonal antibody preparation can be used to produce anti-CD3 antibodies that bind to the CD3 protein or a portion or fragment thereof. In certain embodiments, the extracellular domain comprises a CD3ε subunit comprising a linear stretch of the sequence on the F-G loop. In some embodiments, the CD3ε subunit may comprise three discontinuous regions: residues 79ε to 85ε (F-G loop), residue 34ε (the first residue of the βC strand), and residues 46ε and 48ε (C'-D loop). Full-length CD3 proteins or fragments thereof are useful as immunogens. In some embodiments, CD3 fragments include the extracellular domain of the CD3 protein, or portions or fragments thereof (e.g., a CD3 polypeptide comprising a CD3ε subunit containing three discontinuous regions: residues 79ε-85ε (the F-G loop), residue 34ε (the first residue of the βC chain), and residues 46ε and 48ε (the C'-D loop)), such that antibodies raised against the peptide form specific immune complexes with the CD3 protein. In some embodiments, antigenic CD3 peptides include at least 10, at least 20, at least 30, at least 40, at least 50, at least 60, at least 70, at least 80, at least 90, or at least 100 amino acid residues. Depending on the use and according to methods well known to those skilled in the art, longer antigenic peptides may be more desirable than shorter antigenic peptides. Multimers of a given epitope may be more effective than monomers.
[0089] If necessary, the immunogenicity of the CD3 protein (or a fragment thereof) can be increased by fusion or conjugation to a carrier protein, such as keyhole limpet hemocyanin (KLH) or ovalbumin (OVA). Many such carrier proteins are known in the art. Combining the CD3 protein with a conventional adjuvant, such as Freund's complete or incomplete adjuvant, can also increase a subject's immune response to the polypeptide. Various adjuvants used to increase immune responses include, but are not limited to, Freund's (complete and incomplete), mineral gels (e.g., aluminum hydroxide), surfactants (e.g., lysolecithin, Pluronic® polyols, polyanions, peptides, oil emulsions, dinitrophenol, etc.), human adjuvants such as Bacillus Calmette-Guerin and Corynebacterium parvum, or similar immunostimulatory compounds. These techniques are standard in the art.
[0090] In describing the present technology, an immune response may be considered a "primary" or "secondary" immune response. A primary immune response, also considered a "protective" immune response, is an immune response that is elicited in an individual as a result of some initial exposure to a particular antigen, e.g., a CD3 protein (e.g., an initial "immunization"). In some embodiments, immunization can occur as a result of inoculating an individual with a vaccine containing an antigen. For example, the vaccine can be a CD3 vaccine that includes one or more CD3 protein-derived antigens. A primary immune response may weaken or attenuate over time, and may even disappear or at least become so attenuated that it is no longer detectable. Thus, the present technology also relates to a "secondary" immune response, which is also considered herein as a "memory immune response." The term secondary immune response refers to an immune response that is elicited in an individual after a primary immune response has already been elicited.
[0091] Thus, a secondary immune response can be elicited, for example, to enhance a pre-existing immune response that has become weak or attenuated, or to revive a previous immune response that has disappeared or is no longer detectable. A secondary or memory immune response can be a humoral (antibody) response or a cellular response. A secondary or memory humoral response occurs when memory B cells generated upon initial presentation of the antigen are activated. A delayed-type hypersensitivity (DTH) response is initiated by CD4 + It is a type of cellular secondary or memory immune response mediated by T cells. Initial exposure to an antigen stimulates the immune system, and additional exposures result in DTH. Following appropriate immunization, anti-CD3 antibodies can be prepared from the subject's serum. If desired, the antibody molecules directed against the CD3 protein can be isolated from the mammal (e.g., from the blood) and further purified by well-known techniques, such as polypeptide A chromatography, to obtain the IgG fraction.
[0092] Monoclonal antibodies. In one embodiment of the present technology, the antibody is an anti-CD3 monoclonal antibody. For example, in some embodiments, the anti-CD3 monoclonal antibody can be a human or mouse anti-CD3 monoclonal antibody. For the preparation of monoclonal antibodies directed against the CD3 protein, or derivatives, fragments, analogs, or homologs thereof, any technique that provides for the production of antibody molecules by continuous cell line culture can be utilized. Such techniques include, but are not limited to, the hybridoma technique (see, e.g., Kohler & Milstein, 1975. Nature 256: 495-497); the trioma technique; the human B cell hybridoma technique (see, e.g., Kozbor, et al., 1983. Immunol. Today 4: 72), and the EBV hybridoma technique for producing human monoclonal antibodies (see, e.g., Cole, et al., 1985. In: MONOCLONAL ANTIBODIES AND CANCER THERAPY, Alan R. Liss, Inc., pp. 77-96). Human monoclonal antibodies can be used in the practice of this technology and can be produced by using human hybridomas (see, e.g., Cote, et al., 1983. Proc. Natl. Acad. Sci. USA 80: 2026-2030) or by in vitro transformation of human B cells with Epstein-Barr virus (see, e.g., Cole, et al., 1985. In: MONOCLONAL ANTIBODIES AND CANCER THERAPY, Alan R. Liss, Inc., pp. 77-96). For example, a population of nucleic acids encoding regions of an antibody can be isolated. PCR using primers derived from sequences encoding conserved regions of the antibody can be used to amplify sequences encoding portions of the antibody from the population, and DNA encoding the antibody or a fragment thereof, such as a variable domain, can then be reconstructed from the amplified sequences. The amplified sequences can be fused to DNA encoding other proteins, such as bacteriophage coat or bacterial cell surface proteins, for expression and display of the fusion polypeptide on phage or bacteria.The amplified sequences can then be expressed and further selected or isolated based on, for example, the affinity of the expressed antibody or fragment thereof for an antigen or epitope present on the CD3 protein. Alternatively, hybridomas expressing anti-CD3 monoclonal antibodies can be prepared by immunizing a subject and then isolating the hybridomas from the subject's spleen using routine methods. See, e.g., Milstein et al. (Galfre and Milstein, Methods Enzymol (1981) 73:3-46). Screening the hybridomas using standard methods results in the production of monoclonal antibodies of varying specificities (i.e., against different epitopes) and affinities. Selected monoclonal antibodies with the desired properties, e.g., CD3 binding, can be used once expressed by the hybridoma; the antibody can be conjugated to a molecule such as polyethylene glycol (PEG) to alter its properties; or the cDNA encoding the antibody can be isolated, sequenced, and manipulated in various ways. The addition of synthetic dendrimer trees to reactive amino acid side chains, such as lysine, can enhance the immunogenic properties of the CD3 protein. Furthermore, the use of CPG-dinucleotide techniques can enhance the immunogenic properties of the CD3 protein. Other manipulations include substituting or deleting specific aminoacyl residues that contribute to antibody instability during storage or after administration to a subject, and affinity maturation techniques that improve the affinity of antibodies for the CD3 protein.
[0093] Hybridoma technology. In some embodiments, the antibody of the present technology is an anti-CD3 monoclonal antibody produced by a hybridoma, which comprises B cells obtained from a transgenic non-human animal, such as a transgenic mouse, whose genome comprises a human heavy chain transgene and a human light chain transgene fused to an immortalized cell. Hybridoma technology is known in the art and includes the techniques taught in Harlow et al., Antibodies: A Laboratory Manual, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, 349 (1988); Hammerling et al., Monoclonal Antibodies And T-Cell Hybridomas, 563-681 (1981). Methods for producing hybridomas and monoclonal antibodies are well known to those skilled in the art.
[0094] Phage display techniques. As described above, the antibodies of the present technology can be produced through the application of recombinant DNA and phage display technology. For example, anti-CD3 antibodies can be prepared using various phage display methods known in the art. In phage display methods, functional antibody domains are displayed on the surface of phage particles that carry the polynucleotide sequences encoding the domains. Phage with desired binding properties are selected from repertoire or combinatorial antibody libraries (e.g., human or murine) by direct selection using antigen, typically antigen bound to or captured on a solid surface or bead. The phages used in these methods are typically filamentous phages, including fd and M13, that have Fab, Fv, or disulfide-stabilized Fv antibody domains recombinantly fused to phage gene III or gene VIII proteins. Furthermore, the method can be adapted for the construction of Fab expression libraries (see, e.g., Huse, et al., Science 246: 1275-1281, 1989), allowing for the rapid and efficient identification of monoclonal Fab fragments with a desired specificity for a CD3 polypeptide, e.g., a polypeptide or a derivative, fragment, analog, or homolog thereof.Other examples of phage display methods that can be used to generate antibodies of the present technology include those described in Huston et al., Proc. Natl. Acad. Sci USA, 85: 5879-5883, 1988; Chaudhary et al., Proc. Natl. Acad. Sci USA, 87: 1066-1070, 1990; Brinkman et al., J. Immunol. Methods 182: 41-50, 1995; Ames et al., J. Immunol. Methods 184: 177-186, 1995; Kettleborough et al., Eur. J. Immunol. 24: 952-958, 1994; Persic et al., Gene 187: 9-18, 1997; Burton et al., Advances in Immunology 57: 191-280, 1994; International Application PCT / GB91 / 01134; WO 90 / 02809; WO 91 / 10737; WO 92 / 01047; WO 92 / 18619; WO 93 / 11236; WO 95 / 15982; WO 95 / 20401; WO 96 / 06213; WO 92 / 01047 (Medical Research Council et al.); WO 97 / 08320 (Morphosys); WO 92 / 01047 (CAT / MRC); WO 91 / 17271 (Affymax); and methods disclosed in U.S. Patent Nos. 5,698,426, 5,223,409, 5,403,484, 5,580,717, 5,427,908, 5,750,753, 5,821,047, 5,571,698, 5,427,908, 5,516,637, 5,780,225, 5,658,727, and 5,733,743.A useful method for displaying polypeptides on the surface of bacteriophage particles by linking them via disulfide bonds is described by Lohning in U.S. Patent No. 6,753,136. As described in the above references, after phage selection, the antibody coding regions from the phage can be isolated and used to generate whole antibodies, including human antibodies, or any other desired antigen-binding fragment, which can be expressed in any desired host, including mammalian cells, insect cells, plant cells, yeast, and bacteria. For example, techniques for recombinantly producing Fab, Fab', and F(ab')2 fragments can also be employed using methods known in the art, such as those disclosed in WO 92 / 22324; Mullinax et al., BioTechniques 12: 864-869, 1992; and Sawai et al., AJRI 34: 26-34, 1995; and Better et al., Science 240: 1041-1043, 1988.
[0095] Generally, hybrid antibodies or hybrid antibody fragments cloned into a display vector can be selected against the appropriate antigen to identify variants that maintain good binding activity, since the antibody or antibody fragment is presented on the surface of a phage or phagemid particle. See, e.g., Barbas III et al., Phage Display, A Laboratory Manual (Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, 2001). However, it is contemplated that other vector formats can also be used for this process, such as cloning an antibody fragment library into a lytic phage vector (modified T7 or Lambda Zap system) for selection and / or screening.
[0096] Expression of Recombinant Anti-CD3 Antibodies. As described above, the antibodies of the present technology can be produced through the application of recombinant DNA technology. Recombinant polynucleotide constructs encoding the anti-CD3 antibodies of the present technology typically include expression control sequences operably linked to the coding sequences of the anti-CD3 antibody chains, including naturally associated or heterologous promoter regions. Accordingly, another aspect of the present technology includes vectors containing one or more nucleic acid sequences encoding the anti-CD3 antibodies of the present technology. For recombinant expression of one or more of the polypeptides of the present technology, a nucleic acid containing all or part of the nucleotide sequence encoding the anti-CD3 antibody is inserted into an appropriate cloning vector or expression vector (i.e., a vector containing the elements necessary for the transcription and translation of the inserted polypeptide coding sequence) using recombinant DNA techniques well known in the art and described in detail below. Methods for generating a diverse collection of vectors are described by Lerner et al. in U.S. Patent Nos. 6,291,160 and 6,680,192.
[0097] In general, expression vectors useful in recombinant DNA techniques are often in the form of plasmids. In this disclosure, "plasmid" and "vector" can be used interchangeably, as vectors are the most commonly used form of vector. However, this technology is intended to include other expression vector types that are not technically plasmids, such as viral vectors (e.g., replication-defective retroviruses, adenoviruses, and adeno-associated viruses), which perform equivalent functions. The viral vector is capable of infecting a subject and expressing the construct in the subject. In some embodiments, the expression control sequence is a eukaryotic promoter system in a vector capable of transforming or transfecting a eukaryotic host cell. After the vector is incorporated into a suitable host, the host is maintained under conditions suitable for high-level expression of the nucleotide sequence encoding the anti-CD3 antibody, and for the collection and purification of the anti-CD3 antibody, e.g., a cross-reactive anti-CD3 antibody. See generally U.S. Patent Application Publication No. 2002 / 0199213. These expression vectors are typically replicable in the host organism either episomes or as an integral part of the host chromosomal DNA. Expression vectors usually contain selectable markers, e.g., ampicillin resistance or hydromycin resistance, which permit detection of cells transformed with the desired DNA sequences. Vectors can also encode signal peptides, e.g., pectate lyase, which are useful for directing the secretion of extracellular antibody fragments. See U.S. Patent No. 5,576,195.
[0098] The recombinant expression vector of the present technology comprises a nucleic acid encoding a protein having CD3-binding properties in a form suitable for expression in a host cell, meaning that the recombinant expression vector comprises one or more regulatory sequences selected based on the host cell used for expression and operably linked to the nucleic acid sequence to be expressed. Within the recombinant expression vector, "operably linked" is intended to mean that the nucleotide sequence of interest is linked to a regulatory sequence in a manner that allows expression of the nucleotide sequence (e.g., in an in vitro transcription / translation system or in a host cell when the vector is introduced into the host cell). The term "regulatory sequence" is intended to include promoters, enhancers, and other expression control elements (e.g., polyadenylation signals). Such regulatory sequences are described, for example, in Goeddel, GENE EXPRESSION TECHNOLOGY: METHODS IN ENZYMOLOGY 185, Academic Press, San Diego, Calif. (1990). Regulatory sequences include sequences that direct constitutive expression of a nucleotide sequence in many types of host cells and sequences that direct expression of a nucleotide sequence only in certain host cells (e.g., tissue-specific regulatory sequences). Those skilled in the art will recognize that the design of an expression vector can depend on factors such as the choice of host cell to be transformed and the desired expression level of the polypeptide. Typical regulatory sequences useful as promoters for recombinant polypeptide expression (e.g., anti-CD3 antibodies) include, but are not limited to, promoters of 3-phosphoglycerate kinase and other glycolytic enzymes. Inducible yeast promoters include promoters from alcohol dehydrogenase, isocytochrome C, and enzymes responsible for maltose and galactose utilization, among others. In one embodiment, a polynucleotide encoding an anti-CD3 antibody of the present technology is operably linked to the ara B promoter and is expressible in a host cell. See U.S. Patent No. 5,028,530.The expression vectors of the present technology can be introduced into host cells to thereby produce polypeptides or peptides (e.g., anti-CD3 antibodies, etc.), including fusion polypeptides, encoded by the nucleic acids described herein.
[0099] Another aspect of the present technology relates to anti-CD3 antibody-expressing host cells, which contain nucleic acids encoding one or more anti-CD3 antibodies. The recombinant expression vectors of the present technology can be designed for expression of anti-CD3 antibodies in prokaryotic or eukaryotic cells. For example, anti-CD3 antibodies can be expressed in bacterial cells such as E. coli, insect cells (using baculovirus expression vectors), fungal cells, such as yeast, yeast cells, or mammalian cells. Suitable host cells are further discussed in Goeddel, GENE EXPRESSION TECHNOLOGY: METHODS IN ENZYMOLOGY 185, Academic Press, San Diego, Calif. (1990). Alternatively, recombinant expression vectors can be transcribed and translated in vitro, for example, using T7 promoter regulatory sequences and T7 polymerase. Methods useful for preparing and screening polypeptides with predetermined properties, such as anti-CD3 antibodies, via expression of stochastically generated polynucleotide sequences have been previously described. See U.S. Patent Nos. 5,763,192, 5,723,323, 5,814,476, 5,817,483, 5,824,514, 5,976,862, 6,492,107, and 6,569,641.
[0100] Expression of polypeptides in prokaryotes is most often carried out in Escherichia coli using vectors containing constitutive or inducible promoters directing the expression of fusion or non-fusion polypeptides. Fusion vectors add several amino acids to the polypeptide encoded therein, usually to the amino terminus of the recombinant polypeptide. Fusion vectors typically serve three purposes: (i) to increase expression of the recombinant polypeptide; (ii) to increase the solubility of the recombinant polypeptide; and (iii) to aid in the purification of the recombinant polypeptide by acting as a ligand in affinity purification. Often, in fusion expression vectors, a proteolytic cleavage site is introduced at the junction of the fusion moiety and the recombinant polypeptide, allowing for separation of the recombinant polypeptide from the fusion moiety following purification of the fusion polypeptide. Such enzymes, and their cognate recognition sequences, include activated factor X, thrombin, and enterokinase. Exemplary fusion expression vectors include pGEX (Pharmacia Biotech Inc; Smith and Johnson, 1988. Gene 67:31-40), pMAL (New England Biolabs, Beverly, Mass.), and pRIT5 (Pharmacia, Piscataway, NJ), which fuse glutathione S-transferase (GST), maltose E-binding polypeptide, or polypeptide A, respectively, to the target recombinant polypeptide.
[0101] Examples of suitable inducible non-fusion E. coli expression vectors include pTrc (Amrann et al., (1988) Gene 69: 301-315) and pET 11d (Studier et al., GENE EXPRESSION TECHNOLOGY: METHODS IN ENZYMOLOGY 185, Academic Press, San Diego, Calif. (1990) 60-89). Methods for the targeted assembly of separate active peptide or protein domains to produce multifunctional polypeptides via polypeptide fusion are described by Pack et al., U.S. Pat. Nos. 6,294,353 and 6,692,935. One strategy for maximizing recombinant polypeptide expression in E. coli, e.g., anti-CD3 antibodies, is to express the polypeptide in a host bacterium with an impaired ability to proteolytically cleave the recombinant polypeptide. For example, see Gottesman, GENE EXPRESSION TECHNOLOGY: METHODS IN ENZYMOLOGY 185, Academic Press, San Diego, Calif. (1990) 119-128. Another strategy is to modify the nucleic acid sequence of the nucleic acid that is inserted into expression vector so that each codon that represents each amino acid is preferentially used in expression host, for example, E. coli (see, for example, Wada, et al., 1992. Nucl. Acids Res. 20: 2111-2118).This modification of nucleic acid sequence of this technology can be carried out by standard DNA synthesis techniques.
[0102] In another embodiment, the anti-CD3 antibody expression vector is a yeast expression vector. Examples of vectors for expression in the yeast Saccharomyces cerevisiae include pYepSec1 (Baldari, et al., 1987, EMBO J. 6: 229-234), pMFa (Kurjan and Herskowitz, Cell 30: 933-943, 1982), pJRY88 (Schultz et al., Gene 54: 113-123, 1987), pYES2 (Invitrogen Corporation, San Diego, Calif.), and picZ (Invitrogen Corp, San Diego, Calif.). Alternatively, anti-CD3 antibodies can be expressed in insect cells using baculovirus expression vectors. Baculoviruses that can be used to express polypeptides, such as anti-CD3 antibodies, in cultured insect cells (e.g., SF9 cells) include the pAc series (Smith, et al., Mol. Cell. Biol. 3: 2156-2165, 1983) and the pVL series (Lucklow and Summers, 1989. Virology 170: 31-39).
[0103] In yet another embodiment, the nucleic acid encoding the anti-CD3 antibody of the present technology is expressed in mammalian cells using a mammalian expression vector. Examples of mammalian expression vectors include, but are not limited to, pCDM8 (Seed, Nature 329: 840, 1987) and pMT2PC (Kaufman, et al., EMBO J. 6: 187-195, 1987). When used in mammalian cells, the control functions of the expression vector are often provided by viral regulatory elements. For example, commonly used promoters are derived from polyoma, adenovirus 2, cytomegalovirus, and simian virus 40. For other expression systems suitable for both prokaryotic and eukaryotic cells that are useful for expressing the anti-CD3 antibodies of the present technology, see, e.g., Chapters 16 and 17 of Sambrook, et al., MOLECULAR CLONING: A LABORATORY MANUAL. 2nd ed., Cold Spring Harbor Laboratory, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, 1989.
[0104] In another embodiment, the recombinant mammalian expression vector is capable of directing expression of the nucleic acid in a particular cell type (e.g., tissue-specific regulatory elements). Tissue-specific regulatory elements are known in the art. Non-limiting examples of suitable tissue-specific promoters include the albumin promoter (liver-specific; Pinkert, et al., Genes Dev. 1: 268-277, 1987), lymphoid-specific promoters (Calame and Eaton, Adv. Immunol. 43: 235-275, 1988), promoters of T cell receptors (Winoto and Baltimore, EMBO J. 8: 729-733, 1989) and immunoglobulins (Banerji, et al., 1983. Cell 33: 729-740; Queen and Baltimore, Cell 33: 741-748, 1983), and neuronal-specific promoters (e.g., neurofilament promoter; Byrne and Ruddle, Proc. Natl. Acad. Sci. USA 86: 5473-5477, 1989). 1989), pancreatic-specific promoters (Edlund, et al., 1985. Science 230: 912-916), and mammary gland-specific promoters (e.g., milk whey promoter; U.S. Pat. No. 4,873,316 and European Patent Application Publication No. 264,166). Developmentally regulated promoters, such as the mouse hox promoters (Kessel and Gruss, Science 249: 374-379, 1990) and the alpha-fetoprotein promoter (Campes and Tilghman, Genes Dev. 3: 537-546, 1989), are also encompassed. Another aspect of the present method relates to a host cell into which a recombinant expression vector of the present technology has been introduced. The terms "host cell" and "recombinant host cell" are used interchangeably herein. The term is understood to refer not only to the particular subject cell but also to the progeny or potential progeny of that cell. Because certain modifications may occur in successive generations due to mutation or environmental influences, the progeny may not actually be identical to the parent cell, but still fall within the scope of the term as used herein.
[0105] Host cells can be any prokaryotic or eukaryotic cell. For example, anti-CD3 antibodies can be expressed in bacterial cells such as E. coli, insect cells, yeast, or mammalian cells. Mammalian cells are suitable hosts for expressing nucleotide segments encoding immunoglobulins or fragments thereof. See Winnacker, From Genes to Clones (VCH Publishers, NY, 1987). Several suitable host cell lines capable of secreting intact heterologous proteins have been developed in the art, including Chinese hamster ovary (CHO) cell lines, various COS cell lines, HeLa cells, L cells, and myeloma cell lines. In some embodiments, the cells are non-human. Expression vectors for these cells contain expression control sequences, such as an origin of replication, a promoter, and an enhancer, as well as necessary processing information sites, such as ribosome binding sites, RNA splice sites, polyadenylation sites, and transcription termination sequences. Queen et al., Immunol. Rev. 89: 49, 1986. Illustrative expression control sequences are promoters derived from endogenous genes, cytomegalovirus, SV40, adenovirus, bovine papillomavirus, and the like. Co et al., J Immunol. 148: 1149, 1992. Other suitable host cells are known to those skilled in the art.
[0106] Vector DNA can be introduced into prokaryotic or eukaryotic cells via conventional transformation or transfection techniques. As used herein, the terms "transformation" and "transfection" are intended to refer to various art-recognized techniques for introducing foreign nucleic acids (e.g., DNA) into host cells, including calcium phosphate or calcium chloride co-precipitation, DEAE-dextran-mediated transfection, lipofection, electroporation, gene guns, or viral-based transfection. Other methods used to transform mammalian cells include the use of polybrene, protoplast fusion, liposomes, electroporation, and microinjection (see generally, Sambrook et al., Molecular Cloning). Suitable methods for transforming or transfecting host cells can be found in Sambrook, et al. (MOLECULAR CLONING: A LABORATORY MANUAL. 2nd ed., Cold Spring Harbor Laboratory, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, 1989) and other laboratory manuals. The vectors containing the DNA segments of interest can be transferred into the host cell by well-known methods, depending on the type of cellular host.
[0107] It is known that in stable transfection of mammalian cells, depending on the expression vector and transfection technique used, only a small proportion of cells may integrate the foreign DNA into their genome. To identify and select these integrants, a gene encoding a selectable marker (e.g., resistance to antibiotics) is generally introduced into the host cells along with the gene of interest. Various selectable markers include markers that confer resistance to drugs, such as G418, hygromycin, and methotrexate. The nucleic acid encoding the selectable marker can be introduced on the same vector as the vector encoding the anti-CD3 antibody in the host cells, or it can be introduced on a separate vector. Cells stably transfected with the introduced nucleic acid can be identified by drug selection (e.g., cells that have incorporated the selectable marker gene will survive, while the other cells die).
[0108] Host cells containing the anti-CD3 antibodies of the present technology, such as prokaryotic or eukaryotic host cells in culture, can be used to produce (i.e., express) recombinant anti-CD3 antibodies. In one embodiment, the method includes culturing host cells (into which a recombinant expression vector encoding the anti-CD3 antibody has been introduced) in an appropriate medium to produce the anti-CD3 antibody. In another embodiment, the method further includes isolating the anti-CD3 antibody from the medium or host cells. After expression, the anti-CD3 antibody collection, e.g., the anti-CD3 antibody or anti-CD3 antibody-related polypeptide, is purified from the culture medium and host cells according to standard procedures in the art, including HPLC purification, column chromatography, gel electrophoresis, and the like. In one embodiment, the anti-CD3 antibody is produced in a host organism according to the method of Boss et al., U.S. Pat. No. 4,816,397. Typically, the anti-CD3 antibody chains are expressed with a signal sequence, thus releasing them into the culture medium. However, if the anti-CD3 antibody chains are not naturally secreted by the host cells, they can be released by treatment with mild detergent. Purification of recombinant polypeptides is well known in the art and includes ammonium sulfate precipitation, affinity chromatography purification techniques, column chromatography, ion exchange purification techniques, gel electrophoresis, and the like (see generally, Scopes, Protein Purification (Springer-Verlag, NY, 1982)).
[0109] A polynucleotide encoding an anti-CD3 antibody, e.g., an anti-CD3 antibody coding sequence, can be incorporated into a transgene for introduction into the genome of a transgenic animal and subsequent expression in the milk of the transgenic animal. See, e.g., U.S. Patent Nos. 5,741,957, 5,304,489, and 5,849,992. A suitable transgene comprises a light and / or heavy chain encoding sequence operably linked to a promoter and enhancer from a mammary gland-specific gene, such as casein and β-lactoglobulin. In producing transgenic animals, the transgene can be microinjected into a fertilized oocyte, or can be incorporated into the genome of an embryonic stem cell, the nucleus of which can be transferred into an enucleated oocyte.
[0110] Single-chain antibody. In one embodiment, the anti-CD3 antibody of the present technology is a single-chain anti-CD3 antibody. According to the present technology, it is possible to adapt the technology to produce single-chain antibodies specific to CD3 protein (see, for example, U.S. Patent No. 4,946,778). Examples of techniques that can be used to produce the single-chain Fvs and antibodies of the present technology include those described in U.S. Patent Nos. 4,946,778 and 5,258,498; Huston et al., Methods in Enzymology, 203: 46-88, 1991; Shu, L. et al., Proc. Natl. Acad. Sci. USA, 90: 7995-7999, 1993; and Skerra et al., Science 240: 1038-1040, 1988.
[0111] Chimeric and humanized antibodies. In one embodiment, the anti-CD3 antibody of the present technology is a chimeric anti-CD3 antibody. In one embodiment, the anti-CD3 antibody of the present technology is a humanized anti-CD3 antibody. In one embodiment of the present technology, the donor and acceptor antibodies are monoclonal antibodies derived from different species. For example, the acceptor antibody is a human antibody (to minimize its antigenicity in humans), in which case the resulting CDR-grafted antibody is termed a "humanized" antibody.
[0112] Recombinant anti-CD3 antibodies, such as chimeric and humanized monoclonal antibodies, containing both human and non-human portions, can be produced using standard recombinant DNA techniques and are within the scope of the present technology. For some uses, including the in vivo use of the anti-CD3 antibodies of the present technology in humans and the use of these agents in in vitro detection assays, chimeric or humanized anti-CD3 antibodies can be used. The chimeric and humanized monoclonal antibodies can be produced by recombinant DNA techniques known in the art.Useful methods are described, for example, in International Application PCT / US86 / 02269; U.S. Pat. No. 5,225,539; European Patent No. 184187; European Patent No. 171496; European Patent No. 173494; International Publication No. WO 86 / 01533; U.S. Pat. No. 4,816,567; U.S. Pat. No. 5,225,539; European Patent No. 125023; Better, et al., 1988. Science 240: 1041-1043; Liu, et al., 1987. Proc. Natl. Acad. Sci. USA 84: 3439-3443; Liu, et al., 1987. J. Immunol. 139: 3521-3526; Sun, et al., 1987. Proc. Natl. Acad. Sci. USA 84: 214-218;Nishimura, et al., 1987. Cancer Res. 47: 999-1005;Wood, et al., 1985. Nature 314: 446-449;Shaw, et al., 1988. J. Natl. Cancer Inst. 80: 1553-1559;Morrison (1985) Science 229: 1202-1207;Oi, et al. (1986) BioTechniques 4: 214;Jones, et al., 1986. Nature 321: 552-525;Verhoeyan, et al., 1988. Science 239: 1534;Morrison, Science 229: 1202, 1985; al., BioTechniques 4: 214, 1986; Gillies et al., J. Immunol. Methods, 125: 191-202, 1989; U.S. Patent No. 5,807,715; and Beidler, et al., 1988. J. Immunol. 141: 4053-4060.For example, antibodies can be engineered by techniques such as CDR grafting (EP 0 239 400; WO 91 / 09967; U.S. Pat. No. 5,530,101; U.S. Pat. No. 5,585,089; U.S. Pat. No. 5,859,205; U.S. Pat. No. 6,248,516; EP 460167), veneering or resurfacing (EP 0 592 106; EP 0 519 596; Padlan EA, Molecular Immunology, 28: 489-498, 1991; Studnicka et al., Protein Engineering 7: 805-814, 1994; Roguska et al., PNAS 91: 969-973, 1994), and chain shuffling. Humanization can be achieved using a variety of techniques, including humanization using recombinant humanized proteins (US Pat. No. 5,565,332), including recombinant humanized proteins (e.g., recombinant humanized proteins) and recombinant humanized proteins (e.g., recombinant humanized proteins).In one embodiment, cDNA encoding a murine anti-CD3 monoclonal antibody is digested with restriction enzymes selected specifically to remove sequences encoding the Fc constant region, and the equivalent portion of cDNA encoding a human Fc constant region is substituted (Robinson et al., International Application PCT / US86 / 02269; Akira et al., European Patent Application Publication No. 184,187; Taniguchi, European Patent Application Publication No. 171,496; Morrison et al., European Patent Application Publication No. 173,494; Neuberger et al., International Publication No. WO 86 / 01533; Cabilly et al. U.S. Pat. No. 4,816,567; Cabilly et al., European Patent Application Publication No. 125,023; Better et al. (1988) Science 240: 1041-1043; Liu et al. (1987) Proc. Natl. Acad. Sci. USA 84: 3439-3443; Liu et al. (1987) J Immunol 139: 3521-3526; Sun et al. (1987) Proc. Natl. Acad. Sci. USA 84: 214-218; Nishimura et al. (1987) Cancer Res 47: 999-1005; Wood et al. (1985) Nature 314: 446-449; and Shaw et al. (1988) J. Natl. Cancer Inst. 80: 1553-1559; see U.S. Patent No. 6,180,370; U.S. Patent No. 6,300,064; U.S. Patent No. 6,696,248; U.S. Patent No. 6,706,484; U.S. Patent No. 6,828,422).
[0113] In one embodiment, the present technology provides for the construction of humanized anti-CD3 antibodies that are not likely to induce a human anti-mouse antibody (hereinafter referred to as "HAMA") response, yet still have effective antibody effector functions. As used herein, the terms "human" and "humanized" in the context of antibodies refer to any antibody that is expected to elicit a therapeutically acceptable, weak immunogenic response in human subjects. In one embodiment, the present technology provides humanized anti-CD3 antibodies, heavy and light chain immunoglobulins.
[0114] CDR antibody. In some embodiments, the anti-CD3 antibody of the present technology is an anti-CD3 CDR antibody. Generally, the donor and acceptor antibodies used to generate the anti-CD3 CDR antibody are monoclonal antibodies from different species, and typically the acceptor antibody is a human antibody (to minimize its antigenicity in humans), in which case the resulting CDR-grafted antibody is termed a "humanized" antibody. The graft is a single V-type antibody of the acceptor antibody. H or V L or a single CDR (or part of a single CDR) in V H and V L Multiple CDRs (or portions thereof) within one or both of the variable domains are possible. Frequently, all three CDRs of all variable domains of the acceptor antibody are replaced with the corresponding donor CDRs, but only as many need be replaced as are necessary to allow proper binding of the resulting CDR-grafted antibody to the CD3 protein. Methods for producing CDR-grafted and humanized antibodies are taught by Queen et al. U.S. Pat. No. 5,585,089; U.S. Pat. No. 5,693,761; U.S. Pat. No. 5,693,762; and Winter U.S. Pat. No. 5,225,539; and European Patent No. 0682040. H and V LMethods useful for preparing polypeptides are taught by Winter et al., U.S. Pat. No. 4,816,397; U.S. Pat. No. 6,291,158; U.S. Pat. No. 6,291,159; U.S. Pat. No. 6,291,161; U.S. Pat. No. 6,545,142; European Patent No. 0368684; European Patent No. 0451216; and European Patent No. 0120694.
[0115] After selecting suitable framework region candidates from the same family and / or the same family members, either or both of the heavy and light chain variable regions are generated by grafting CDRs derived from the starting species into the hybrid framework regions. The construction of hybrid antibodies or hybrid antibody fragments having hybrid variable chain regions for any of the above aspects can be achieved using conventional methods known to those skilled in the art. For example, DNA sequences encoding the hybrid variable domains described herein (i.e., frameworks based on the target species and CDRs derived from the starting species) can be generated by oligonucleotide synthesis and / or PCR. Nucleic acids encoding the CDR regions can also be isolated from the starting species antibody using appropriate restriction enzymes and ligated to the target species framework by ligation using appropriate ligation enzymes. Alternatively, the frameworks of the variable regions of the starting species antibody can be altered by site-directed mutagenesis.
[0116] Because hybrids are constructed from a selection between multiple candidates corresponding to each framework region, there are many combinations of sequences amenable to construction according to the principles described herein. Thus, a library of hybrids can be assembled, with members having different combinations of individual framework regions. The library can be an electronic database collection of sequences or a physical collection of hybrids. This process typically does not alter the FRs of the acceptor antibody adjacent to the grafted CDRs. However, one skilled in the art may be able to improve the antigen-binding affinity of the resulting anti-CD3 CDR-grafted antibody by replacing certain residues in a given FR so that the FR is more similar to the corresponding FR in the donor antibody. Suitable locations for substitution include amino acid residues adjacent to the CDR or that can interact with the CDR (see, e.g., U.S. Pat. No. 5,585,089, especially columns 12-16). Alternatively, one skilled in the art can start with the donor FR and modify it to be more similar to the acceptor FR or human consensus FR. Techniques for making these modifications are known in the art. In particular, if the resulting FR matches or is at least 90% or more identical to the human consensus FR for that position, doing so is unlikely to significantly increase the antigenicity of the resulting modified anti-CD3 CDR-grafted antibody compared to the same antibody with fully human FRs.
[0117] Bispecific antibodies (BsAbs). Bispecific antibodies are antibodies that can simultaneously bind to two targets with different structures, e.g., two different target antigens, two different epitopes on the same target antigen, or a hapten and a target antigen or an epitope on a target antigen. BsAbs can be generated, for example, by combining heavy and / or light chains that recognize different epitopes on the same or different antigens. In some embodiments, the molecular function of a bispecific binding agent is to bind to one antigen (or epitope) on one of its two binding arms (one VH / VL pair) and to a different antigen (or epitope) on its second arm (a different VH / VL pair). By this definition, a bispecific binding agent has two different antigen-binding arms (both specificity and CDR sequence) and is monovalent for each antigen to which it binds.
[0118] Multispecific antibodies, such as bispecific antibodies (BsAbs) and bispecific antibody fragments (BsFabs), have, for example, at least one arm that specifically binds to CD3 and at least one other arm that specifically binds to a second target antigen. In some embodiments, the second target antigen is an antigen or epitope of B cells, T cells, myeloid cells, plasma cells, or mast cells. Additionally or alternatively, in certain embodiments, the second target antigen is selected from the group consisting of CD3, CD4, CD8, CD20, CD19, CD21, CD23, CD46, CD80, HLA-DR, CD74, CD22, CD14, CD15, CD16, CD123, TCR gamma / delta, NKp46, and KIR. In certain embodiments, BsAbs can bind to tumor cells that express the CD3 antigen on their cell surface. In some embodiments, BsAbs are engineered to promote tumor cell killing by directing (or recruiting) cytotoxic T cells to the tumor site. Other exemplary BsAbs include BsAbs having a first antigen-binding site specific for CD3 and a second antigen-binding site specific for a small molecule hapten (e.g., DTPA, IMP288, DOTA, DOTA-Bn, DOTA-desferrioxamine, other DOTA chelates described herein, biotin, fluorescein, or a hapten disclosed in Goodwin, D A. et al, 1994, Cancer Res. 54(22):5937-5946).
[0119] A variety of bispecific fusion proteins can be generated using molecular engineering. For example, BsAbs have been constructed that utilize complete immunoglobulin frameworks (e.g., IgG), single-chain variable fragments (scFvs), or combinations thereof. In some embodiments, the bispecific fusion protein is bivalent, e.g., comprising an scFv with a single binding site for one antigen and a Fab fragment with a single binding site for a second antigen. In some embodiments, the bispecific fusion protein is bivalent, e.g., comprising an scFv with a single binding site for one antigen and another scFv fragment with a single binding site for a second antigen. In other embodiments, the bispecific fusion protein is tetravalent, e.g., comprising an immunoglobulin (e.g., IgG) with two binding sites for one antigen and two identical scFvs for a second antigen. BsAbs composed of two scFv units in tandem have been shown to be a clinically successful bispecific antibody format. In some embodiments, BsAbs are designed to contain two single-chain variable fragments (scFvs) in tandem, such that an scFv that binds to a tumor antigen (e.g., CD3) is linked to an scFv that binds to T cells (e.g., by binding to CD3). In this way, T cells are recruited to tumor sites so that they can mediate cytotoxic killing of tumor cells. See, for example, Dreier et al., J. Immunol. 170:4397-4402 (2003); Bargou et al., Science 321:974-977 (2008). In some embodiments, BsAbs of the present technology are designed to contain two single-chain variable fragments (scFvs) in tandem, such that an scFv that binds to a tumor antigen (e.g., CD3) is linked to an scFv that binds to a small molecule DOTA hapten.
[0120] Recent methods for producing BsAbs involve engineered recombinant monoclonal antibodies with additional cysteine residues that cross-link more strongly than more common immunoglobulin isotypes. See, e.g., FitzGerald et al., Protein Eng. 10(10):1221-1225 (1997). Another approach is to engineer recombinant fusion proteins by linking two or more different single-chain antibody or antibody fragment segments with the required dual specificities. See, e.g., Coloma et al., Nature Biotech. 15:159-163 (1997). Using molecular engineering, a variety of bispecific fusion proteins can be produced.
[0121] Bispecific fusion proteins linking two or more different single-chain antibodies or antibody fragments are produced in a similar manner. Using recombinant methods, a variety of fusion proteins can be produced. In certain embodiments, a BsAb according to the present technology comprises an immunoglobulin, which comprises a heavy chain and a light chain, and an scFv. In certain embodiments, the scFv is linked to the C-terminus of the heavy chain of any CD3 immunoglobulin disclosed herein. In certain embodiments, the scFv is linked to the C-terminus of the light chain of any CD3 immunoglobulin disclosed herein. In various embodiments, the scFv is linked to the heavy or light chain via a linker sequence. The appropriate linker sequence required for in-frame connection of the heavy chain Fd to the scFv can be generated by PCR reaction using a V L and V kappa The DNA fragment encoding the scFv is then ligated into a staging vector containing a DNA sequence encoding the CH1 domain. The resulting scFv-CH1 construct is excised and transformed into the V domain of the CD3 antibody. H The resulting vector is ligated into a vector containing DNA sequences encoding the bispecific fusion protein. The resulting vector can be used to transfect a suitable host cell, such as a mammalian cell, for expression of the bispecific fusion protein.
[0122] In some embodiments, the linker is at least 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 35, 40, 45, 50, 55, 60, 65, 70, 75, 80, 85, 90, 95, 100 or more amino acids in length. In some embodiments, the linker is characterized in that it does not tend to adopt a rigid three-dimensional structure, but rather provides flexibility to the polypeptide (e.g., the first and / or second antigen-binding site). In some embodiments, linkers are used in the BsAbs described herein based on particular properties imparted to the BsAb, such as, for example, increased stability. In some embodiments, the BsAbs of the present technology comprise a G4S linker. In some embodiments, the BsAb of the present technology is (G4S) n linker, and n is 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15 or more.
[0123] Self-assembly and disassembly (SADA) conjugates. In some embodiments, the anti-CD3 antibodies of the present technology comprise one or more SADA domains. The SADA domains can be configured and / or adapted to achieve environment-dependent multimerization with beneficial kinetic, thermodynamic, and / or pharmacological properties. For example, it is recognized that SADA domains can be part of conjugates that enable effective delivery of a payload to a desired target site while minimizing the risk of off-target interactions. The anti-CD3 antibodies of the present technology can comprise a SADA domain linked to one or more binding domains. In some embodiments, the conjugates are characterized in that they multimerize to form complexes of a desired size under appropriate conditions (e.g., in a solution where the conjugate is present above a threshold concentration or pH and / or when present at a target site characterized by an appropriate level or density of receptors for the payload), and disassemble into smaller forms under other conditions (e.g., in the absence of an appropriate environmental multimerization trigger).
[0124] SADA conjugates may have improved characteristics compared to conjugates lacking the SADA domain. In some embodiments, the improved characteristics of a multimeric conjugate include: increased avidity / binding to the target, increased specificity for the target cell or tissue, and / or extended initial serum half-life. In some embodiments, the improved characteristics include that, through dissociation into smaller states (e.g., dimers or monomers), the SADA conjugate exhibits reduced non-specific binding, reduced toxicity, and / or improved renal clearance. In some embodiments, the SADA conjugate exhibits at least 75% identity to the amino acid sequence of a human homomultimerizing polypeptide and one or more multimerization dissociation constants (K D ) SADA polypeptides having an amino acid sequence characterized by:
[0125] In some embodiments, the SADA conjugate is constructed and arranged such that it adopts a first multimerization state and one or more higher order multimerization states. In some embodiments, the first multimerization state is less than about 70 kDa in size. In some embodiments, the first multimerization state is a non-multimerized state (e.g., a monomer or a dimer). In some embodiments, the first multimerization state is a monomer. In some embodiments, the first multimerization state is a dimer. In some embodiments, the first multimerization state is a multimerized state (e.g., a trimer or tetramer). In some embodiments, the higher order multimerization state is a homotetramer or a higher order homomultimer greater than 150 kDa in size. In some embodiments, the higher order homomultimerized conjugate is an SADA polypeptide K conjugate. D In some embodiments, the SADA conjugate is stable in aqueous solution when present at a concentration greater than or equal to the SADA polypeptide K. D Under physiological conditions when the total number of nuclei is below 1, the nuclei transition from the higher order multimerization state to the first multimerization state.
[0126] In some embodiments, the SADA polypeptide is covalently linked to the binding domain via a linker. Any suitable linker known in the art can be used. In some embodiments, the SADA polypeptide is linked to the binding domain via a polypeptide linker. In some embodiments, the polypeptide linker is a Gly-Ser linker. In some embodiments, the polypeptide linker is or comprises the sequence (GGGGS)n, where n represents the number of repeated GGGGS units and is 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 25, 30, or more. In some embodiments, the binding domain is fused directly to the SADA polypeptide.
[0127] In some embodiments, the SADA domain is a human polypeptide or a fragment and / or derivative thereof. In some embodiments, the SADA domain is substantially non-immunogenic in humans. In some embodiments, the SADA polypeptide is stable as a multimer. In some embodiments, the SADA polypeptide lacks unpaired cysteine residues. In some embodiments, the SADA polypeptide does not have large exposed hydrophobic surfaces. In some embodiments, the SADA domain has or is predicted to have a structure comprising helical bundles that can associate in a parallel or antiparallel orientation. In some embodiments, the SADA polypeptide is capable of reversible multimerization. In some embodiments, the SADA domain is a tetramerization domain, a heptamerization domain, a hexamerization domain, or an octamerization domain. In certain embodiments, the SADA domain is a tetramerization domain. In some embodiments, the SADA domain is composed of multimerization domains, each composed of helical bundles that associate in a parallel or antiparallel orientation. In some embodiments, the SADA domain is selected from the group consisting of one of the following human proteins: p53, p63, p73, heterogeneous nuclear ribonucleoprotein C (hnRNPC), the N-terminal domain of synaptosomal-associated protein 23 (SNAP-23), StefinB (cystatin B), potassium voltage-gated channel subfamily KQT member 4 (KCNQ4), or cyclin-D-associated protein (CBFA2T1). Examples of suitable SADA domains are described in International Application No. PCT / US2018 / 031235, which is hereby incorporated by reference in its entirety. Polypeptide sequences for exemplary SADA domains are provided below.
[0128] Human p53 tetramerization domain amino acid sequence (321-359) KPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEP (SEQ ID NO: 34) Human p63 tetramerization domain amino acid sequence (396-450) RSPDDELLYLPVRGRETYEMLLKIKESLELMQYLPQHTIETYRQQQQQQHQHLLQKQ (SEQ ID NO: 35) Human p73 tetramerization domain amino acid sequence (348-399) RHGDEDTYYLQVRGRENFEILMKLKESLELMELVPQPLVDSYRQQQQLLQRP (SEQ ID NO: 36). Human HNRNPC tetramerization domain amino acid sequence (194-220) QAIKKELTQIKQKVDSLLENLEKIEKE (SEQ ID NO: 37) Human SNAP-23 tetramerization domain amino acid sequence (23-76) STRRILGLAIESQDAGIKTITMLDEQKEQLNRIEEGLDQINKDMRETEKTLTEL (SEQ ID NO: 38) Human StefinB tetramerization domain amino acid sequence (2-98) MCGAPSATQPATAETQHIADQVRSQLEEKENKKFPVFKAVSFKSQVVAGTNYFIKVHVGDEDFVHLRVFQSLPHENKPLTLSNYQTNKAKHDELTYF (SEQ ID NO: 39) KCNQ4 tetramerization domain amino acid sequence (611-640) DEISMMGRVVKVEKQVQSIEHKLDLLLGFY (SEQ ID NO: 40) CBFA2T1 tetramerization domain amino acid sequence (462-521) TVAEAKRQAAEDALAVINQQEDSSESCWNCGRKASETCSGCNTARYCGSFCQHKDWEKHH (SEQ ID NO: 41)
[0129] In some embodiments, the SADA polypeptide is or comprises p53, p63, p73, heterogeneous nuclear ribonucleoprotein C (hnRNPC), the N-terminal domain of synaptosomal-associated protein 23 (SNAP-23), StefinB (cystatin B), potassium voltage-gated channel subfamily KQT member 4 (KCNQ4), or the tetramerization domain of cyclin-D-associated protein (CBFA2T1). In some embodiments, the SADA polypeptide is or comprises a sequence at least 75%, 80%, 85%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, 99%, or 100% identical to the sequence set forth in any one of SEQ ID NOs: 34-41.
[0130] Fc Modifications. In some embodiments, the anti-CD3 antibodies of the present technology comprise a variant Fc region, wherein the variant Fc region comprises at least one amino acid modification relative to a wild-type Fc region (or parent Fc region) such that the molecule has altered affinity for an Fc receptor (e.g., FcγR), except that the variant Fc region does not have a substitution at a position that directly contacts the Fc receptor based on crystallographic and structural analysis of Fc-Fc receptor interactions, such as the interaction disclosed by Sondermann et al., Nature, 406:267-273 (2000). Examples of positions within the Fc region that directly contact an Fc receptor, such as FcγR, include amino acids 234-239 (hinge region), amino acids 265-269 (B / C loop), amino acids 297-299 (C7E loop), and amino acids 327-332 (F / G loop). In some embodiments, the anti-CD3 antibodies of the present technology have altered affinity for activating and / or inhibitory receptors and have a variant Fc region with one or more amino acid modifications, wherein the one or more amino acid modifications are substitution of N297 with alanine, or substitution of K322 with alanine.
[0131] Glycosylation modifications. In some embodiments, the anti-CD3 antibodies of the present technology have an Fc region with variant glycosylation compared to the parent Fc region. In some embodiments, the variant glycosylation comprises the absence of fucose; in some embodiments, the variant glycosylation results from expression in GnT1-deficient CHO cells. In some embodiments, the antibodies of the present technology may have modified glycosylation sites compared to a suitable reference antibody that binds to an antigen of interest (e.g., CD3) without altering the functionality of the antibody, e.g., its binding activity to the antigen. As used herein, a "glycosylation site" includes any particular amino acid sequence in an antibody to which an oligosaccharide (i.e., a carbohydrate containing two or more monosaccharides linked together) can be specifically and covalently attached. Oligosaccharide side chains are typically linked to the antibody backbone via N- or O-linkages. N-linked glycosylation refers to the attachment of an oligosaccharide moiety to the side chain of an asparagine residue. O-linked glycosylation refers to the attachment of an oligosaccharide moiety to a hydroxyamino acid, such as serine or threonine. For example, an Fc-glycoform (hCD3-IgGln) lacking certain oligosaccharides containing fucose and terminal N-acetylglucosamine can be produced in specialized CHO cells and exhibit enhanced ADCC effector function.
[0132] In some embodiments, the carbohydrate content of the immunoglobulin-related compositions disclosed herein is modified by adding or deleting glycosylation sites. Methods for modifying the carbohydrate content of antibodies are well known in the art and are included within the present technology, see, e.g., U.S. Pat. No. 6,218,149; European Patent No. 0359096; U.S. Patent Application Publication No. 2002 / 0028486; International Publication No. WO 03 / 035835; U.S. Patent Application Publication No. 2003 / 0115614; U.S. Pat. No. 6,218,149; and U.S. Pat. No. 6,472,511. All of the foregoing patent documents are incorporated herein by reference in their entireties. In some embodiments, the carbohydrate content of an antibody (or a relevant portion or component thereof) is modified by deleting one or more endogenous carbohydrate moieties of the antibody. In certain embodiments, the present technology involves deleting a glycosylation site in the Fc region of an antibody by modifying position 297 from asparagine to alanine.
[0133] Engineered glycoforms may be useful for a variety of purposes, including, but not limited to, enhancing or decreasing effector function. Engineered glycoforms can be generated by any method known to those of skill in the art, for example, by using engineered or variant expression systems, by co-expression with one or more enzymes, e.g., N-acetylglucosamine transferase III (GnTIII), by expressing molecules comprising an Fc region in different organisms or cell lines derived from different organisms, or by modifying the carbohydrates after the molecule comprising an Fc region has been expressed. Methods for producing engineered glycoforms are known in the art and include those described in Umana et al., 1999, Nat. Biotechnol. 17: 176-180; Davies et al., 2001, Biotechnol. Bioeng. 74:288-294; Shields et al., 2002, J. Biol. Chem. 277:26733-26740; Shinkawa et al., 2003, J. Biol. Chem. 278:3466-3473; U.S. Patent No. 6,602,684; U.S. Patent Application No. 10 / 277,370; U.S. Patent Application No. 10 / 113,929; WO 00 / 61739; WO 01 / 292246; WO 02 / 311140; WO 02 / 30954; POTILLEGENT™ technology (Biowa, Inc. Princeton, NJ); GLYCOMAB™ glycosylation engineering technology (GLYCART biotechnology AG, Zurich, Switzerland), each of which is incorporated herein by reference in its entirety. See, for example, WO 00 / 061739; U.S. Patent Application Publication No. 2003 / 0115614; Okazaki et al., 2004, JMB, 336: 1239-49.
[0134] Fusion Protein. In one embodiment, the anti-CD3 antibody of the present technology is a fusion protein. When fused to a second protein, the anti-CD3 antibody of the present technology can be used as an antigenic tag. Examples of domains that can be fused to a polypeptide include not only heterologous signal sequences but also other heterologous functional regions. Fusion does not necessarily have to be direct and can occur through a linker sequence. Furthermore, the fusion protein of the present technology can be engineered to improve the characteristics of the anti-CD3 antibody. For example, adding additional amino acids, particularly a region of charged amino acids, to the N-terminus of the anti-CD3 antibody can improve stability and durability during purification from host cells or during subsequent handling and storage. Furthermore, adding a peptide moiety to the anti-CD3 antibody can facilitate purification. The region can be removed prior to final preparation of the anti-CD3 antibody. Adding a peptide moiety to facilitate handling of a polypeptide is a routine technique well known in the art. The anti-CD3 antibody of the present technology can be fused to a marker sequence, such as a peptide, that facilitates purification of the fusion polypeptide. In selected embodiments, the marker amino acid sequence is a six-histidine peptide, such as the tag provided in the pQE vector (QIAGEN, Inc., Chatsworth, Calif.), many of which are commercially available. Six histidines provide convenient purification of the fusion protein, as described, for example, in Gentz et al., Proc. Natl. Acad. Sci. USA 86: 821-824, 1989. Another peptide tag useful for purification, the "HA" tag, corresponds to an epitope derived from the influenza hemagglutinin protein. Wilson et al., Cell 37: 767, 1984.
[0135] Thus, any of these above fusion proteins can be engineered using the polynucleotides or polypeptides of the present technology. Moreover, in some embodiments, the fusion proteins described herein exhibit increased half-life in vivo. Fusion proteins with disulfide-linked dimeric structures (due to IgG) can be more efficient at binding and neutralizing other molecules than monomeric secreted proteins or protein fragments alone. Fountoulakis et al., J. Biochem. 270: 3958-3964, 1995. Similarly, European Patent No. 464,533 (Canadian Patent No. 2,045,869) discloses fusion proteins comprising various portions of the constant region of an immunoglobulin molecule together with another human protein or fragment thereof. In many cases, the Fc portion in a fusion protein is beneficial for therapy and diagnosis and can therefore, for example, result in improved pharmacokinetic properties. See European Patent No. 0,232,262. Alternatively, it may be desirable to delete or modify the Fc portion after the fusion protein has been expressed, detected, and purified. For example, the Fc portion can be a hindrance to therapy and diagnosis when the fusion protein is used as an antigen for immunization. In drug discovery, for example, human proteins such as hIL-5 have been fused to Fc portions for the purpose of high-throughput screening assays to identify hIL-5 antagonists. Bennett et al., J. Molecular Recognition 8: 52-58, 1995; Johanson et al., J. Biol. Chem., 270: 9459-9471, 1995.
[0136] Labeled anti-CD3 antibody. In one embodiment, the anti-CD3 antibody of the present technology is conjugated with a label moiety, i.e., a detectable group. The particular label or detectable group conjugated to the anti-CD3 antibody is not a critical aspect of the present technology, as long as it does not significantly interfere with the specific binding of the anti-CD3 antibody of the present technology to the CD3 protein. The detectable group can be any material with a detectable physical or chemical property. Such detectable labels have been well developed in the fields of immunoassays and imaging. Generally, almost any label useful in the method can be applied to the present technology. Thus, the label is any composition that is detectable by spectroscopic, photochemical, biochemical, immunochemical, electrical, optical, or chemical means. Labels useful in the practice of the present technology include magnetic beads (e.g., Dynabeads™), fluorescent dyes (e.g., fluorescein isothiocyanate, Texas Red, rhodamine, and the like), radiolabels (e.g., 3 H, 14 C. 35 S, 125 I, 121 I, 131 I, 112 In, 99 mTc), other contrast agents such as microbubbles (for ultrasound imaging), 18 F, 11 C. 15 O. 89 Zr (for positron emission tomography), 99m Tc, 111Examples of suitable labels include In (for single photon emission tomography), enzymes (e.g., horseradish peroxidase, alkaline phosphatase, and other enzymes commonly used in ELISA), and calorimetric labels such as colloidal gold or colored glass or plastic (e.g., polystyrene, polypropylene, latex, and the like) beads. Patents describing the use of such labels include U.S. Pat. Nos. 3,817,837; 3,850,752; 3,939,350; 3,996,345; 4,277,437; 4,275,149; and 4,366,241; each of which is incorporated herein by reference in its entirety and for all purposes.
[0004] Handbook of Fluorescent Probes and Research Chemicals (6 th See also Molecular Probes, Inc., Eugene, OR).
[0137] The label can be attached directly or indirectly to the desired component of the assay according to methods well known in the art. As noted above, a wide variety of labels can be used, with the choice of label depending on factors such as the sensitivity required, ease of conjugation with the compound, stability requirements, available instrumentation, and disposal regulations. Non-radioactive labels are often attached by indirect means. Typically, a ligand molecule (e.g., biotin) is covalently bound to the molecule. The ligand then binds to an anti-ligand (e.g., streptavidin) molecule that is either inherently detectable or covalently bound to a signal system such as a detectable enzyme, fluorescent compound, or chemiluminescent compound. Several ligands and anti-ligands can be used. Where a ligand has a natural anti-ligand, e.g., biotin, thyroxine, and cortisol, the ligand can be used in combination with a labeled, naturally occurring anti-ligand. Alternatively, any haptenic or antigenic compound can be used in combination with an antibody, e.g., an anti-CD3 antibody.
[0138] Molecules can also be directly conjugated to signal-generating compounds, for example, by conjugation with an enzyme or fluorophore. Enzymes of interest as labels are primarily hydrolases, particularly phosphatases, esterases, and glycosidases, or oxidoreductases, particularly peroxidases. Fluorescent compounds useful as labeling moieties include, but are not limited to, fluorescein and its derivatives, rhodamine and its derivatives, dansyl, umbelliferone, and the like. Chemiluminescent compounds useful as labeling moieties include, but are not limited to, luciferin and 2,3-dihydrophthalazinediones, such as luminol. For a review of various labeling or signal-generating systems that can be used, see U.S. Pat. No. 4,391,904.
[0139] Means for detecting labels are well known to those skilled in the art. Thus, for example, if the label is a radioactive label, means for detection include a scintillation counter or photographic film, as in autoradiography. If the label is a fluorescent label, the label can be detected by exciting the fluorescent dye with the appropriate wavelength of light and detecting the resulting fluorescence. Fluorescence can be detected visually, by photographic film, by the use of an electronic detector such as a charge-coupled device (CCD) or a photomultiplier tube, etc. Similarly, enzyme labels can be detected by providing the enzyme with an appropriate substrate and detecting the resulting reaction product. Finally, simple colorimetric labels can be detected simply by observing the color associated with the label. Thus, in various dipstick assays, conjugated gold often appears pink, and various conjugated beads appear the color of the bead. Some assay formats do not require the use of labeled components. For example, an agglutination assay can be used to detect the presence of a target antibody, e.g., anti-CD3 antibody. In this case, antigen-coated particles are agglutinated by a sample containing the target antibody. In this format, none of the components need to be labeled, and the presence of the target antibody is detected by simple visual inspection.
[0140] B. Identifying and Characterizing the Anti-CD3 Antibodies of the Present Technology Methods for Identifying and / or Screening Anti-CD3 Antibodies of the Present Technology. Methods useful for identifying and screening antibodies against CD3 polypeptides for antibodies with the desired specificity for the CD3 protein (e.g., antibodies that bind to the extracellular domain of the CD3 protein, particularly the CD3ε subunit, which includes three discontinuous regions: residues 79ε-85ε (F-G loop), residue 34ε (the first residue of the βC chain), and residues 46ε and 48ε (C'-D loop)) include any immunologically mediated technique known in the art. Components of the immune response can be detected in vitro by a variety of methods well known to those skilled in the art. For example, (1) cytotoxic T lymphocytes can be incubated with radiolabeled target cells, and the lysis of these target cells can be detected by radioactive release; (2) helper T lymphocytes can be incubated with antigen and antigen-presenting cells, and cytokine synthesis and secretion can be measured by standard methods (Windhagen A et al., Immunity, 2: 373-80, 1995); (3) antigen-presenting cells can be incubated with whole protein antigen, and presentation of that antigen on MHC can be detected by T lymphocyte activation assays or biophysical methods (Harding et al., Proc. Natl. Acad. Sci., 86: 4230-4, 1989); (4) mast cells can be incubated with a reagent that crosslinks their Fc epsilon receptors, and histamine release can be measured by enzyme immunoassay (Siraganian et al., TIPS, 4: 432-437, 1983); and (5) enzyme-linked immunosorbent assay (ELISA).
[0141] Similarly, the products of immune responses in model organisms (e.g., mice) or human subjects can be detected by a variety of methods well known to those skilled in the art. For example, (1) antibody production in response to vaccination can be readily detected by standard methods currently used in clinical laboratories, such as ELISA; (2) migration of immune cells to sites of inflammation can be detected by scratching the surface of the skin and placing a sterile container on the scratch to capture migrating cells (Peters et al., Blood, 72:1310-5, 1988); (3) proliferation of peripheral blood mononuclear cells (PBMCs) in response to mitogens or mixed lymphocyte reactions can be detected by immunohistochemistry. 3 (4) the phagocytic activity of granulocytes, macrophages, and other phagocytes in PBMCs can be measured by placing PBMCs in wells with labeled particles (Peters et al., Blood, 72: 1310-5, 1988); and (5) the differentiation of immune system cells can be measured by labeling PBMCs with antibodies against CD molecules such as CD4 and CD8 and measuring the fraction of PBMCs expressing these markers.
[0142] In one embodiment, the anti-CD3 antibody of the present technology is selected using the display of CD3 peptides on the surface of a replicable genetic package.See, for example, U.S. Patent No. 5,514,548, U.S. Patent No. 5,837,500, U.S. Patent No. 5,871,907, U.S. Patent No. 5,885,793, U.S. Patent No. 5,969,108, U.S. Patent No. 6,225,447, U.S. Patent No. 6,291,650, U.S. Patent No. 6,492,160, EP No. 585 287, EP No. 605522, EP No. 616640, EP No. 1024191, EP No. 589 877, EP No. 774 511, and EP No. 844 306.Methods useful for producing / selecting filamentous bacteriophage particles containing phagemid genomes encoding binding molecules with desired specificity have been described. See, for example, EP 774 511, U.S. Pat. No. 5,871,907, U.S. Pat. No. 5,969,108, U.S. Pat. No. 6,225,447, U.S. Pat. No. 6,291,650, U.S. Pat. No. 6,492,160. In some embodiments, the anti-CD3 antibodies of the present technology are selected using display of CD3 peptides on the surface of yeast host cells. A method useful for isolating scFv polypeptides by yeast surface display is described by Kieke et al., Protein Eng. 1997 Nov;10(11):1303-10.
[0143] In some embodiments, the anti-CD3 antibodies of the present technology are selected using ribosome display. Methods useful for identifying ligands in peptide libraries using ribosome display are described by Mattheakis et al., Proc. Natl. Acad. Sci. USA 91: 9022-26, 1994; and Hanes et al., Proc. Natl. Acad. Sci. USA 94: 4937-42, 1997. In certain embodiments, the anti-CD3 antibodies of the present technology are selected using tRNA display of CD3 peptides. A method useful for in vitro selection of ligands using tRNA display is described in Merryman et al., Chem. Biol., 9: 741-46, 2002. In one embodiment, the anti-CD3 antibody of the present technology is selected using RNA display. Methods useful for selecting peptides and proteins using RNA display libraries are described in Roberts et al. Proc. Natl. Acad. Sci. USA, 94: 12297-302, 1997; and Nemoto et al., FEBS Lett., 414: 405-8, 1997. Methods useful for selecting peptides and proteins using non-natural RNA display libraries are described in Frankel et al., Curr. Opin. Struct. Biol., 13: 506-12, 2003.
[0144] In some embodiments, the anti-CD3 antibodies of the present technology are mixed with labeled CD3 protein expressed in the periplasm of Gram-negative bacteria. See WO 02 / 34886. As described in Harvey et al., Proc. Natl. Acad. Sci. 22: 9193-98 2004 and U.S. Patent Application Publication No. 2004 / 0058403, clones expressing a recombinant polypeptide with affinity for CD3 protein will increase the concentration of labeled CD3 protein bound by the anti-CD3 antibody, allowing isolation of the cells from the rest of the library. After selection of the desired anti-CD3 antibody, the antibody can be produced in large quantities by any technique known to those of skill in the art, such as, for example, prokaryotic or eukaryotic expression, and the like. For example, an anti-CD3 antibody, including but not limited to, an anti-CD3 hybrid antibody or fragment, can be produced by constructing an expression vector encoding an antibody heavy chain in which the CDRs necessary to retain the original species antibody binding specificity and, if necessary, a minimal portion of the variable region framework (engineered according to the techniques described herein) are derived from the starting species antibody, with the remainder of the antibody being derived from a target species immunoglobulin that can be engineered as described herein, thereby using conventional techniques to create a vector for expression of the hybrid antibody heavy chain.
[0145] Measuring CD3 Binding. In some embodiments, a CD3 binding assay is an assay format in which a CD3 protein and an anti-CD3 antibody are combined under conditions suitable for binding between the CD3 protein and the anti-CD3 antibody, and the amount of binding between the CD3 protein and the anti-CD3 antibody is assessed. The amount of binding is compared to an appropriate control, which can be the amount of binding in the absence of CD3 protein, the amount of binding in the presence of a nonspecific immunoglobulin composition, or both. The amount of binding can be assessed by any suitable method. Binding assays include, for example, ELISA, radioimmunoassay, scintillation proximity assay, fluorescence energy transfer assay, liquid chromatography, membrane filtration assay, and the like. Biophysical assays for direct measurement of CD3 protein binding to an anti-CD3 antibody include, for example, nuclear magnetic resonance, fluorescence, fluorescence polarization, surface plasmon resonance (BIACORE chip), and the like. Specific binding can be determined by standard assays known in the art, such as radioligand binding assays, ELISA, FRET, immunoprecipitation, SPR, NMR (2D-NMR), mass spectrometry, and the like. If the specific binding of the candidate anti-CD3 antibody is at least 1 percent greater than the binding observed in the absence of the candidate anti-CD3 antibody, the candidate anti-CD3 antibody is useful as an anti-CD3 antibody of the present technology.
[0146] Use of the anti-CD3 antibody of the present technology Overview. The anti-CD3 antibodies of the present technology are useful in methods known in the art related to the localization and / or quantification of CD3 protein (e.g., for use in measuring the level of CD3 protein in an appropriate physiological sample, for use in diagnostic methods, for use in imaging polypeptides, etc.). The antibodies of the present technology are useful for isolating CD3 protein by standard techniques such as affinity chromatography or immunoprecipitation. The anti-CD3 antibodies of the present technology can facilitate the purification of native immunoreactive CD3 protein from biological samples, e.g., mammalian serum or cells, as well as the purification of recombinantly produced immunoreactive CD3 protein expressed in a host system. Furthermore, the anti-CD3 antibodies can be used to detect immunoreactive CD3 protein (e.g., in plasma, cell lysates, or cell supernatants) to assess the amount and pattern of expression of the immunoreactive polypeptide. The anti-CD3 antibodies of the present technology can be used diagnostically to monitor immunoreactive CD3 protein levels in tissues as part of clinical laboratory procedures, e.g., to determine the effectiveness of a given treatment regimen. As noted above, detection can be facilitated by coupling (i.e., physically linking) the anti-CD3 antibodies of the present technology to a detectable substance.
[0147] Detection of CD3 protein. An exemplary method for detecting the presence or absence of immunoreactive CD3 protein in a biological sample includes obtaining a biological sample from a test subject and contacting the biological sample with an anti-CD3 antibody of the present technology capable of detecting immunoreactive CD3 protein, such that the presence of immunoreactive CD3 protein is detected in the biological sample. Detection can be accomplished using a detectable label attached to the antibody. The term "labeled" with respect to an anti-CD3 antibody encompasses direct labeling of the antibody by coupling (i.e., physically linking) a detectable substance to the antibody, as well as indirect labeling of the antibody by reactivity with another compound, such as a secondary antibody, that is directly labeled. Examples of indirect labeling include detection of a primary antibody using a fluorescently labeled secondary antibody and end-labeling of a DNA probe with biotin such that it can be detected using fluorescently labeled streptavidin. In some embodiments, the anti-CD3 antibodies disclosed herein are conjugated to one or more detectable labels. For such uses, the anti-CD3 antibodies may be detectably labeled by covalent or non-covalent attachment of a chromogenic, enzymatic, radioisotope, isotopic, fluorescent, toxic, chemiluminescent, nuclear magnetic resonance imaging agent, or other label.
[0148] Examples of suitable chromogenic labels include diaminobenzidine and 4-hydroxyazo-benzene-2-carboxylic acid. Examples of suitable enzyme labels include malate dehydrogenase, staphylococcal nuclease, Δ-5-steroid isomerase, yeast-alcohol dehydrogenase, α-glycerol phosphate dehydrogenase, triose phosphate isomerase, peroxidase, alkaline phosphatase, asparaginase, glucose oxidase, β-galactosidase, ribonuclease, urease, catalase, glucose-6-phosphate dehydrogenase, glucoamylase, and acetylcholinesterase. Examples of suitable radioisotope labels include: 3 H, 111 In, 125 I, 131 I, 32 P, 35 S, 14 C. 51 Cr, 57 To, 58 Co, 59 Fe, 75 Se, 152 EU, 90 Y, 67 Cu, 217 Ci, 211At, 212 Pb, 47 Sc, 109 Pd and the like. 111 In is that it is caused by the liver 125 I or 131 1-(P-isothiocyanatobenzyl)-DPTA is an exemplary isotope when in vivo imaging is used to avoid the problem of dehalogenation of I-labeled CD3-binding antibodies. Furthermore, this isotope has a more favorable gamma emission energy for imaging (Perkins et al., Eur. J. Nucl. Med. 70:296-301 (1985); Carasquillo et al., J. Nucl. Med. 25:281-287 (1987)). For example, 1-(P-isothiocyanatobenzyl)-DPTA coupled to a monoclonal antibody 111 In shows little uptake in non-tumor tissues, especially the liver, enhancing the specificity of tumor localization (Esteban et al., J. Nucl. Med. 28:861-870 (1987)). Examples of suitable non-radioactive isotope labels include: 157 Gd, 55 Mn, 162 Dy, 52 Tr, and 56 Fe is one example.
[0149] Examples of suitable fluorescent labels include: 152 Examples of suitable toxin labels include Eu labels, fluorescein labels, isothiocyanate labels, rhodamine labels, phycoerythrin labels, phycocyanin labels, allophycocyanin labels, green fluorescent protein (GFP) labels, o-phthaldehyde labels, and fluorescamine labels. Examples of suitable toxin labels include diphtheria toxin, ricin, and cholera toxin. Examples of chemiluminescent labels include luminol labels, isoluminol labels, aromatic acridinium ester labels, imidazole labels, acridinium salt labels, oxalate ester labels, luciferin labels, luciferase labels, and aequorin labels. Examples of nuclear magnetic resonance imaging agents include heavy metal nuclei such as Gd, Mn, and iron. The detection method of the present technology can be used to detect immunoreactive CD3 protein in biological samples in vitro and in vivo. In vitro techniques for detecting immunoreactive CD3 protein include enzyme-linked immunosorbent assay (ELISA), Western blot, immunoprecipitation, radioimmunoassay, and immunofluorescence. Furthermore, in vivo techniques for detecting immunoreactive CD3 protein include introducing a labeled anti-CD3 antibody into a subject. For example, the anti-CD3 antibody can be labeled with a radioactive marker, and its presence and location in the subject can be detected by standard imaging techniques. In one embodiment, the biological sample contains CD3 protein molecules from the test subject.
[0150] Immunoassays and Imaging. The anti-CD3 antibodies of the present technology can be used to assay immunoreactive CD3 protein levels in biological samples (e.g., human plasma) using antibody-based techniques. For example, protein expression in tissues can be studied using classical immunohistological methods. Jalkanen, M. et al., J. Cell. Biol. 101: 976-985, 1985; Jalkanen, M. et al., J. Cell. Biol. 105: 3087-3096, 1987. Other antibody-based methods useful for detecting protein gene expression include immunoassays such as enzyme-linked immunosorbent assays (ELISAs) and radioimmunoassays (RIAs). Suitable antibody assay labels are known in the art and include enzyme labels such as glucose oxidase and iodine ( 125 I, 121 I, 131 I), carbon ( 14 C), sulfur ( 35 S), tritium ( 3 H), indium ( 112 In), and technetium ( 99 mTc) or other radioactive agents, and fluorescent labels such as fluorescein, rhodamine, and green fluorescent protein (GFP), and biotin.
[0151] In addition to assaying the immunoreactive CD3 protein level in biological samples, the anti-CD3 antibodies of the present technology can be used for in vivo imaging of CD3. Antibodies useful for this method include those detectable by X-ray imaging, NMR, or ESR. For X-ray imaging, suitable labels include radioisotopes such as barium or cesium, which emit detectable radiation but are not obviously harmful to the subject. Markers suitable for NMR and ESR include those with a detectable characteristic spin, such as deuterium, which can be incorporated into anti-CD3 antibodies by labeling nutrients related to the relevant scFv clone. Radioactive isotopes (e.g., 131 I, 112 In, 99 An anti-CD3 antibody labeled with a suitable detectable imaging moiety, such as mTc, a radiopaque substance, or a material detectable by nuclear magnetic resonance, is introduced into a subject (e.g., parenterally, subcutaneously, or intraperitoneally). It will be understood that the size of the subject and the imaging system used will determine the amount of imaging moiety required to produce a diagnostic image. In the case of a radioisotope moiety, for a human subject, the amount of radioactivity injected will typically be in the range of about 5 millicuries to 20 millicuries. 99 mTc.Then, labeled anti-CD3 antibody accumulates at the location of the cells that contain specific target polypeptide.For example, the labeled anti-CD3 antibody of the present technology accumulates in the cells and tissues in which CD3 protein is localized in the subject.
[0152] Thus, the present technology provides a method for diagnosing a disease state, the method comprising: (a) assaying the expression of immunoreactive CD3 protein by measuring binding of an anti-CD3 antibody of the present technology in cells or bodily fluids of an individual; and (b) comparing the amount of immunoreactive CD3 protein present in the sample with a standard reference, wherein an increase or decrease in the level of immunoreactive CD3 protein compared to the standard is indicative of the disease state. Affinity purification. The anti-CD3 antibody of the present technology can be used to purify immunoreactive CD3 protein from a subject. In some embodiments, the antibody is immobilized on a solid support. Examples of such solid supports include plastics such as polycarbonate, complex carbohydrates such as agarose and sepharose, acrylic resins such as polyacrylamide, and latex beads. Techniques for coupling antibodies to such solid supports are well known in the art (Weir et al., "Handbook of Experimental Immunology" 4th Ed., Blackwell Scientific Publications, Oxford, England, Chapter 10 (1986); Jacoby et al., Meth. Enzym. 34 Academic Press, NY (1974)).
[0153] The simplest method of binding an antigen to an antibody support matrix is to collect beads in a column and pass the antigen solution down the column. The efficiency of this method depends on the contact time between the immobilized antibody and the antigen, which can be extended by using a low flow rate. The immobilized antibody captures the antigen as it flows past. Alternatively, the antigen can be contacted with the antibody-support matrix by mixing the antigen solution with the support (e.g., beads) and rotating or rocking the slurry to allow maximum contact between the antigen and the immobilized antibody. After the binding reaction is complete, the slurry is passed through a column for collection of the beads. The beads are washed using an appropriate wash buffer, followed by elution of the pure or substantially pure antigen. The antibody or polypeptide of interest can be conjugated to a solid support such as a bead. Furthermore, a first solid support such as a bead can also be conjugated to a second solid support, which can be a second bead or other support, if desired, by any suitable means, including those disclosed herein for conjugating a polypeptide to a support. Thus, any of the conjugation methods and means disclosed herein for conjugating a polypeptide to a solid support can also be applied to conjugating a first support to a second support, where the first solid support and the second solid support can be the same or different.
[0154] Suitable linkers that can be used as crosslinkers for conjugating polypeptides to solid supports include various agents that can react with functional groups present on the surface of the support, with the polypeptide, or both. Reagents useful as crosslinkers include homobifunctional reagents and, in particular, heterobifunctional reagents. Useful bifunctional crosslinkers include, but are not limited to, N-SIAB, dimaleimide, DTNB, N-SATA, N-SPDP, SMCC, and 6-HYNIC. Crosslinkers can be selected to provide a selectively cleavable bond between the polypeptide and the solid support. For example, photolabile crosslinkers such as 3-amino-(2-nitrophenyl)propionic acid can be used as a means to cleave the polypeptide from the solid support. (Brown et al., Mol. Divers, pp. 4-12 (1995); Rothschild et al., Nucl. Acids Res., 24:351-66 (1996); and U.S. Pat. No. 5,643,722). Other cross-linking agents are well known in the art (see, for example, Wong (1991), supra, and Hermanson (1996), supra).
[0155] Antibodies or polypeptides can be immobilized on solid supports, such as beads, via covalent amide bonds formed between carboxyl-functionalized beads and the amino terminus of the polypeptide, or conversely, via covalent amide bonds formed between amino-functionalized beads and the carboxyl terminus of the polypeptide. Furthermore, bifunctional trityl linkers can be attached to supports via amino or carboxyl groups on the resin, for example, via an amino resin to a 4-nitrophenyl active ester on a resin, such as a Wang resin. Using the bifunctional trityl approach, the solid support may require treatment with a volatile acid, such as formic acid or trifluoroacetic acid, to ensure that the polypeptide can be cleaved and removed. In such cases, the polypeptide can be deposited as a beadless patch at the bottom of a well on the solid support or on the flat surface of the solid support. After addition of a matrix solution, the polypeptide can be desorbed by MS.
[0156] Hydrophobic trityl linkers can also be utilized as acid-labile linkers by using a volatile acid or an appropriate matrix solution, such as a matrix solution containing 3-HPA, to cleave the amino-linked trityl group from the polypeptide. Acid lability can be varied. For example, trityl, monomethoxytrityl, dimethoxytrityl, or trimethoxytrityl can be converted to an appropriate p-substituted tritylamine derivative of the polypeptide, or a more acid-labile tritylamine derivative; i.e., trityl ether and tritylamine bonds can be made to the polypeptide. Thus, the polypeptide can be removed from the hydrophobic linker by, for example, disrupting the hydrophobic attraction, or, if desired, by cleaving the trityl ether or tritylamine bond under acidic conditions, including typical MS conditions where a matrix such as 3-HPA acts as the acid.
[0157] Orthogonally cleavable linkers can also be useful for linking a first solid support, e.g., beads, to a second solid support, or for linking a polypeptide of interest to a solid support. Using such linkers, a first solid support, e.g., beads, can be selectively cleaved from a second solid support without cleaving the polypeptide from the support, and the polypeptide can then be cleaved from the beads at a later time. For example, a disulfide linker that can be cleaved using a reducing agent such as DTT can be used to link beads to a second solid support, and an acid-cleavable bifunctional trityl group can be used to immobilize the polypeptide to the support. If desired, the linkage of the polypeptide to the solid support can be cleaved first, e.g., leaving the linkage between the first support and the second support intact. The trityl linker can provide a covalent or hydrophobic conjugation, and regardless of the nature of the conjugation, the trityl group is easily cleaved under acidic conditions. For example, beads can be attached to a second support through a linking group that can be selected to have a length and chemical properties that facilitate high-density binding of beads to the solid support or of polypeptides to the beads. Such linking groups can have, for example, a "dendritic" structure, thereby providing multiple functional groups per binding site on the solid support. Examples of such linking groups include polylysine, polyglutamic acid, pentaerythritol, and tris-hydroxy-aminomethane.
[0158] Non-covalent binding. An antibody or polypeptide can be conjugated to a solid support through non-covalent interactions, or a first solid support can also be conjugated to a second solid support. For example, magnetic beads made of ferromagnetic materials that can be magnetized can be attached to a magnetic solid support and released from the support by removing the magnetic field. Alternatively, the solid support can be provided with ionic or hydrophobic moieties, which can enable the ionic or hydrophobic moieties to interact with polypeptides, for example, with polypeptides containing attached trityl groups, or with a second solid support that has hydrophobic properties, respectively. Solid supports can also be provided with members of specific binding pairs and thus conjugated to a polypeptide or second solid support containing the complementary binding moiety, for example, avidin- or streptavidin-coated beads can be bound to a polypeptide incorporating a biotin moiety or to a second solid support coated with biotin or a derivative of biotin such as iminobiotin.
[0159] It should be recognized that any of the binding members disclosed herein or otherwise known in the art can be reversed. Thus, for example, biotin can be incorporated into either a polypeptide or a solid support, and conversely, avidin or other biotin-binding moiety is incorporated into the support or polypeptide, respectively. Other specific binding pairs contemplated for use herein include, but are not limited to, hormones and their receptors, enzymes and their substrates, nucleotide sequences and their complementary sequences, antibodies and antigens with which they specifically interact, and other such pairs known to those of skill in the art. A. Diagnostic Uses of the Anti-CD3 Antibodies of the Present Technology Overview. The anti-CD3 antibodies of the present technology are useful in diagnostic methods. Thus, the present technology provides a method of using antibodies in diagnosing CD3 activity in a subject. The anti-CD3 antibodies of the present technology can be selected so that they have any level of epitope binding specificity and very high binding affinity for the CD3 protein. Generally, the higher the binding affinity of the antibody, the more stringent washing conditions can be implemented in an immunoassay to remove non-specifically bound materials without removing the target polypeptide. Thus, the anti-CD3 antibodies of the present technology useful in diagnostic assays typically have a binding affinity of about 10 8 M -1 , 10 9 M -1 , 10 10 M -1 , 10 11 M -1 or 10 12 M -1 Additionally, anti-CD3 antibodies used as diagnostic reagents desirably have a kinetic on-rate sufficient to reach equilibrium under standard conditions in at least 12 hours, at least five (5) hours, or at least one (1) hour.
[0160] Anti-CD3 antibodies can be used to detect immunoreactive CD3 protein in a variety of standard assay formats, including immunoprecipitation, Western blotting, ELISA, radioimmunoassay, and immunometric assays. See, for example, Harlow & Lane, *Antibodies, A Laboratory Manual* (Cold Spring Harbor Publications, New York, 1988), U.S. Patent Nos. 3,791,932, 3,839,153, 3,850,752, 3,879,262, 4,034,074, 3,791,932, 3,817,837 ... See, for example, US Pat. Nos. 50,578, 3,853,987, 3,867,517, 3,879,262, 3,901,654, 3,935,074, 3,984,533, 3,996,345, 4,034,074, and 4,098,876. The biological sample can be obtained from any tissue or bodily fluid of a subject. In certain embodiments, the subject has an early stage of cancer. In one embodiment, the early stage of cancer is determined by the level or expression pattern of CD3 protein in a sample obtained from the subject. In certain embodiments, the sample is selected from the group consisting of urine, blood, serum, plasma, saliva, amniotic fluid, cerebrospinal fluid (CSF), and biopsy tissue.
[0161] Immunometric or sandwich assays are one type of format for the diagnostic method of this technology. See U.S. Patent Nos. 4,376,110, 4,486,530, 5,914,241, and 5,965,375. Such assays use one antibody, e.g., an anti-CD3 antibody or population of anti-CD3 antibodies immobilized on a solid phase, and another anti-CD3 antibody or population of anti-CD3 antibodies in solution. Typically, the solution anti-CD3 antibody or population of anti-CD3 antibodies is labeled. When antibody populations are used, the populations may contain antibodies that bind to different epitope specificities within the target polypeptide. Thus, the same population can be used for both the solid phase and the solution antibody. When anti-CD3 monoclonal antibodies are used, first and second CD3 monoclonal antibodies with different binding specificities are used in the solid phase and solution phase. The solid-phase (also referred to as "capture") and solution (also referred to as "detection") antibodies can be contacted with the target antigen either sequentially or simultaneously. If the solid-phase antibody is contacted first, the assay is referred to as a forward assay. Conversely, if the solution antibody is contacted first, the assay is referred to as a reverse assay. If the target is contacted with both antibodies simultaneously, the assay is referred to as a simultaneous assay. After contacting the CD3 protein with the anti-CD3 antibody, the sample is typically incubated for a period varying from about 10 minutes to about 24 hours, typically about 1 hour. A wash step is then performed to remove sample components that were not specifically bound by the anti-CD3 antibody used as a diagnostic reagent. If the solid-phase and solution antibodies are bound in separate steps, washing can be performed after one or both binding steps. After washing, binding is typically quantified by detecting a label linked to the solid phase through binding of the labeled solution antibody. Typically, for a given pair or population of antibodies and given reaction conditions, a calibration curve is generated from samples containing known concentrations of target antigen. The concentration of immunoreactive CD3 protein in the sample being tested is then read by interpolation from the calibration curve (i.e., standard curve). The analyte can be measured from the amount of labeled solution antibody bound at equilibrium or by kinetic measurements of the bound labeled solution antibody at a series of time points before equilibrium is reached.The slope of such a curve is a measure of the concentration of CD3 protein in the sample.
[0162] Suitable supports for use in the above methods include, for example, nitrocellulose membranes, nylon membranes, and derivatized nylon membranes, as well as agarose, dextran-based gels, dipsticks, particulate matter, microspheres, magnetic particles, test tubes, microtiter wells, particles such as SEPHADEX™ (Amersham Pharmacia Biotech, Piscataway, NJ). Immobilization can be by absorption or covalent attachment. Optionally, the anti-CD3 antibody can be coupled to a linker molecule such as biotin for binding to a surface-bound linker such as avidin. In some embodiments, the present disclosure provides an anti-CD3 antibody of the present technology conjugated to a diagnostic agent. The diagnostic agent may include a radioactive or non-radioactive label, an imaging agent (e.g., for magnetic resonance imaging, computed tomography, or ultrasound), and the radioactive label may be a gamma-, beta-, alpha-, Auger-, or positron-emitting isotope. The administered diagnostic agent is an antibody moiety, i.e., a molecule conjugated to an antibody or antibody fragment, or subfragment, and is useful for diagnosing or detecting disease by locating cells containing the antigen.
[0163] Useful diagnostic agents include, but are not limited to, radioisotopes, dyes (e.g., using biotin-streptavidin complexes), contrast agents, fluorescent compounds or molecules, and enhancing agents for magnetic resonance imaging (MRI) (e.g., paramagnetic ions). U.S. Patent No. 6,331,175 describes MRI techniques and the preparation of antibodies conjugated to MRI enhancing agents and is incorporated by reference in its entirety. In some embodiments, the diagnostic agent is selected from the group consisting of radioisotopes, enhancing agents for use in magnetic resonance imaging, and fluorescent compounds. To load an antibody component with a radiometal or paramagnetic ion, it may be necessary to react the antibody component with a reagent having a long tail to which multiple chelating groups for binding the ion are attached. Such tails can be polylysine, polysaccharides, or other derivatized or derivatizable chains bearing pendant groups to which chelating groups can be attached, such as groups known to be useful for this purpose, such as ethylenediaminetetraacetic acid (EDTA), diethylenetriaminepentaacetic acid (DTPA), porphyrins, polyamines, crown ethers, bis-thiosemicarbazones, polyoximes, and the like. Chelates can be coupled to the antibodies of the present technology using standard chemistry. Chelates are typically linked to antibodies by groups that allow for the formation of bonds to the molecules with minimal loss of immunoreactivity and minimal aggregation and / or internal cross-linking. Other methods and reagents for conjugating chelates to antibodies are disclosed in U.S. Pat. No. 4,824,659. Particularly useful metal-chelate combinations include 2-benzyl-DTPA and its monomethyl and cyclohexyl analogs, which are used with diagnostic isotopes for radioimaging. The same chelates, when complexed with non-radioactive metals such as manganese, iron, and gadolinium, are useful for MRI when used with the CD3 antibodies of the present technology.
[0164] Macrocyclic chelates such as NOTA (1,4,7-triaza-cyclononane-N,N',N"-triacetic acid), DOTA, and TETA (p-bromoacetamido-benzyl-tetraethylaminetetraacetic acid) are used with a variety of metals and radiometals, such as radionuclides of gallium, yttrium, and copper, respectively. Such metal-chelate complexes can be stabilized by tailoring the ring size to the metal of interest. Examples of other DOTA chelates include: (i) DOTA-Phe-Lys(HSG)-D-Tyr-Lys(HSG)-NH2; (i) DOTA-Phe-Lys(HSG)-D-Tyr-Lys(HSG)-NH2; i)Ac-Lys(HSG)D-Tyr-Lys(HSG)-Lys(Tscg-Cys)-NH2;(iii)DOTA-D-Asp-D-Lys(HSG)-D-Asp-D-Lys(HSG)-NH2;(iv)DOTA-D-Glu-D-Lys(HSG)- D-Glu-D-Lys(HSG)-NH2;(v)DOTA-D-Tyr-D-Lys(HSG)-D-Glu-D-Lys(HSG)-NH2;(vi)DOTA-D-Ala-D-Lys(HSG)-D-Glu-D-Lys(HSG)-NH2;(vii)DO TA-D-Phe-D-Lys(HSG)-D-Tyr-D-Lys(HSG)-NH2;(viii)Ac-D-Phe-D-Lys(DOTA)-D-Tyr-D-Lys(DOTA)-NH2;(ix)Ac-D-Phe-D-Lys(DTPA)-D-Tyr -D-Lys(DTPA)-NH2;(x)Ac-D-Phe-D-Lys(Bz-DTPA)-D-Tyr-D-Lys(Bz-DTPA)-NH2;(xi)Ac-D-Lys(HSG)-D-Tyr-D-Lys(HSG)-D-Lys(Tscg-Cys)-N H2;(xii)DOTA-D-Phe-D-Lys(HSG)-D-Tyr-D-Lys(HSG)-D-Lys(Tscg-Cys)-NH2;(xiii)(Tscg-Cys)-D-Phe-D-Lys(HSG)-D-Tyr-D-Lys(HSG)-D- Lys(DOTA)-NH2;(xiv)Tscg-D-Cys-D-Glu-D-Lys(HSG)-D-Glu-D-Lys(HSG)-NH2;(xv)(Tscg-Cys)-D-Glu-D-Lys(HSG)-D-Glu-D-Lys(HSG)-NH2;(xvi)Ac-D-Cys-D-Lys(DOTA)-D-Tyr-D-Ala-D-Lys(DOTA)-D-Cys-NH2;(xvii)Ac-D-Cys-D-Lys(DTPA)-D-Tyr-D-Lys(DTPA)-NH2, (xviii)A c-D-Lys(DTPA)-D-Tyr-D-Lys(DTPA)-D-Lys(Tscg-Cys)-NH2, and (xix)Ac-D-Lys(DOTA)-D-Tyr-D-Lys(DOTA)-D-Lys(Tscg-Cys)-NH2. ;
[0165] Regarding RAIT 223 Other ring-type chelates, such as macrocyclic polyethers, intended for stable binding of nuclides such as Ra, are also contemplated.
[0166] B. Therapeutic Uses of Anti-CD3 Antibodies of the Present Technology In one aspect, the immunoglobulin-related compositions (e.g., antibodies or antigen-binding fragments thereof) of the present technology are useful for treating solid or liquid tumors. Non-limiting examples of suitable solid or liquid tumors include adrenal gland cancer, bladder cancer, blood cancer, bone cancer, brain cancer, breast cancer, carcinoma, cervical cancer, colon cancer, colorectal cancer, uterine cancer, ear, nose and throat (ENT) cancer, endometrial cancer, esophageal cancer, gastrointestinal cancer, head and neck cancer, Hodgkin's disease, intestinal cancer, kidney cancer, pharyngeal cancer, acute and chronic leukemia, liver cancer, lymph node cancer, lymphoma, lung cancer, melanoma, mesothelioma, myeloma, nasopharyngeal cancer, neuroblastoma, non-Hodgkin's lymphoma, oral cancer, ovarian cancer, pancreatic cancer, penile cancer, pharyngeal cancer, prostate cancer, rectal cancer, sarcoma, seminoma, skin cancer, stomach cancer, teratoma, testicular cancer, thyroid cancer, uterine cancer, vaginal cancer, vascular tumors, and metastases thereof.
[0167] In one aspect, the immunoglobulin-related compositions (e.g., antibodies or antigen-binding fragments thereof) of the present technology are used to treat or prevent the development of various diseases, including multiple sclerosis (MS), rheumatoid arthritis (RA), systemic lupus erythematosus, celiac disease, sympathetic ophthalmia, type 1 diabetes, graft-versus-host disease, precursor T acute lymphoblastic leukemia / lymphoma, anaplastic large cell lymphoma, lymphomatoid papulosis type A, mycosis fungoides, pagetoid reticulosis, granulomatous skin laxity, Sézari. The antibodies are useful for treating CD3-associated conditions such as cutaneous CD30+ large cell lymphoma, adult T-cell leukemia / lymphoma, cutaneous large T-cell lymphoma, pleomorphic T-cell lymphoma, lymphomatoid papulosis type B, secondary cutaneous CD30+ large cell lymphoma, hepatosplenic T-cell lymphoma, angioimmunoblastic T-cell lymphoma, enteropathy-associated T-cell lymphoma, non-specified peripheral T-cell lymphoma, subcutaneous T-cell lymphoma, large granular lymphocytic leukemia, and acute mixed leukemia. The treatment can be used in patients identified with pathologically elevated levels of CD3 (e.g., patients diagnosed by the methods described herein) or in patients diagnosed with a disease known to be associated with such pathological levels. In one aspect, the present disclosure provides a method for treating a CD3-associated condition in a subject in need thereof, comprising administering to the subject an effective amount of an antibody (or antigen-binding fragment thereof) of the present technology. Examples of CD3-associated conditions that can be treated by the antibodies of the present technology include, but are not limited to, multiple sclerosis (MS), rheumatoid arthritis (RA), systemic lupus erythematosus, celiac disease, sympathetic ophthalmia, type 1 diabetes, graft-versus-host disease, precursor T acute lymphoblastic leukemia / lymphoma, anaplastic large cell lymphoma, lymphomatoid papulosis type A, mycosis fungoides, Pagetoid reticulosis, granulomatous lax skin, Sézary syndrome, adult T-cell leukemia / lymphoma, cutaneous large T-cell lymphoma, pleomorphic T-cell lymphoma, lymphomatoid papulosis type B, secondary cutaneous CD30+ large cell lymphoma, hepatosplenic T-cell lymphoma, angioimmunoblastic T-cell lymphoma, enteropathy-associated T-cell lymphoma, peripheral T-cell lymphoma not otherwise specified, subcutaneous T-cell lymphoma, large granular lymphocytic leukemia, and acute mixed leukemia.
[0168] The compositions of the present technology may be used in conjunction with other therapeutic agents useful in the treatment of autoimmune diseases or T-cell malignancies. For example, the antibodies of the present technology may be administered separately, sequentially, or simultaneously with at least one additional therapeutic agent selected from the group consisting of nonsteroidal anti-inflammatory drugs (NSAIDs), selective COX-2 inhibitors, glucocorticoids, and conventional disease-modifying antirheumatic drugs (cDMARDs). Examples of NSAIDs include, but are not limited to, (1) salicylic acid derivatives: acetylsalicylic acid (aspirin), diflunisal, and sulfasalazine; (2) para-aminophenol derivatives: acetaminophen; (3) fenamic acids: mefenamic acid, meclofenamic acid, and flufenamic acid; (4) propionic acid derivatives: ibuprofen, naproxen, fenoprofen, ketoprofen, flurbiprofen, and oxaprozin; and (5) enolic acid (oxicam) derivatives: piroxicam and tenoxicam. Examples of selective COX-2 inhibitors include, but are not limited to, meloxicam, salicylate, nimesulide, celecoxib, ofecoxib, valdecoxib, lumiracoxib, parecoxib, and etoricoxib. Examples of glucocorticoids include, but are not limited to, prednisone / prednisolone, methylprednisolone, and fluorinated glucocorticoids such as dexamethasone and betamethasone. Examples of DMARDs include, but are not limited to, methotrexate, leflunomide, gold compounds, sulfasalazine, azathioprine, cyclophosphamide, antimalarials, d-penicillamine, cyclosporine, hydroxychloroquine, etanercept, infliximab, adalimumab, golimumab, and certolizumab pegol.
[0169] The compositions of the present technology can be used in combination with other therapeutic agents useful in the treatment of CD3-associated cancers. For example, the antibodies of the present technology can be administered separately, sequentially, or simultaneously with at least one additional therapeutic agent selected from the group consisting of alkylating agents, platinum agents, taxanes, vinca agents, antiestrogens, aromatase inhibitors, ovarian suppressants, VEGF / VEGFR inhibitors, EGF / EGFR inhibitors, PARP inhibitors, cytostatic alkaloids, cytotoxic antibiotics, antimetabolites, endocrine / hormonal agents, bisphosphonate therapeutic agents, and targeted biological therapeutic agents (e.g., therapeutic peptides described in U.S. Pat. No. 6,306,832, WO2012007137, WO2005000889, WO2010096603, etc.). In some embodiments, the at least one additional therapeutic agent is a chemotherapeutic agent. Specific chemotherapy agents include cyclophosphamide, fluorouracil (or 5-fluorouracil or 5-FU), methotrexate, edatrexate (10-ethyl-10-deaza-aminopterin), thiotepa, carboplatin, cisplatin, taxanes, paclitaxel, protein-bound paclitaxel, docetaxel, vinorelbine, tamoxifen, raloxifene, toremifene, fulvestrant, gemcitabine, irinotecan, ixabepilone, temozolomide, topotecan, vincristine, vinblastine, eribulin, mitomycin, capecitabine, anastrozole, exemestane, letrozole, leuprolide), abarelix, buserelin, goserelin, megestrol acetate, risedronate, pamidronate, ibandronate, alendronate, denosumab, zoledronate, trastuzumab, Tykerb, anthracyclines (e.g., daunorubicin and doxorubicin), bevacizumab, oxaliplatin, melphalan, etoposide, mechlorethamine, bleomycin, microtubule poisons, annonaceous acetogenins, or combinations thereof. The compositions of the present technology may be administered to a subject in need thereof as a single bolus, or the dosing regimen may include multiple administrations administered at various times after the appearance of the tumor.
[0170] Administration can be by any suitable route, including oral, intranasal, parenteral (intravenous, intramuscular, intraperitoneal, or subcutaneous), rectal, intracranial, intratumoral, intrathecal, or topical. Administration includes self-administration and administration by another person. Similarly, it is understood that various modes of treatment of medical conditions as described are intended to mean "substantially," which includes complete, but also includes less than complete, treatment, where some biologically or medically relevant result is achieved. In some embodiments, the antibodies of the present technology comprise pharmaceutical formulations that can be administered in one or more doses in a subject in need thereof. Dosage regimens can be adjusted to provide the desired response (e.g., a therapeutic response).
[0171] Typically, an effective amount of the antibody composition of the present technology sufficient to achieve a therapeutic effect ranges from about 0.000001 mg per kilogram of body weight per day to about 10,000 mg per kilogram of body weight per day. Typically, the dosage range is from about 0.0001 mg per kilogram of body weight per day to about 100 mg per kilogram of body weight per day. For administration of an anti-CD3 antibody, the dosage ranges from about 0.0001 to 100 mg / kg, more usually 0.01 to 5 mg / kg, of the subject's body weight every week, every two weeks, or every three weeks. For example, the dosage can be 1 mg / kg or 10 mg / kg of body weight every week, every two weeks, or every three weeks, or can be within the range of 1 to 10 mg / kg every week, every two weeks, or every three weeks. In one embodiment, a single dosage of the antibody ranges from 0.1 to 10,000 micrograms per kg of body weight. In one embodiment, the antibody concentration in the carrier ranges from 0.2 to 2000 micrograms per milliliter delivered. Exemplary treatment regimens involve administration once every two weeks, once a month, or once every three to six months. The anti-CD3 antibody may be administered multiple times. The interval between single doses may be hourly, daily, weekly, monthly, or yearly. The interval may also be irregular as indicated by measuring the subject's blood levels of the antibody. In some methods, the dosage is adjusted to achieve a serum antibody concentration in the subject of about 75 μg / mL to about 125 μg / mL, 100 μg / mL to about 150 μg / mL, about 125 μg / mL to about 175 μg / mL, or about 150 μg / mL to about 200 μg / mL. Alternatively, the anti-CD3 antibody may be administered as a sustained-release formulation, in which less frequent administration is required. The dosage and frequency vary depending on the half-life of the antibody in the subject. The dosage and frequency of administration can vary depending on whether the treatment is prophylactic or therapeutic. In prophylactic applications, a relatively low dosage is administered at relatively infrequent intervals over a long period of time. In therapeutic applications, a relatively high dosage is required, possibly at relatively short intervals, until the progression of the disease is reduced or terminated, or until the subject shows partial or complete recovery from the symptoms of the disease. Thereafter, the patient can be administered a prophylactic regimen.
[0172] In another aspect, the present disclosure provides a method for detecting cancer in a subject in vivo, the method comprising: (a) administering to the subject an effective amount of an antibody (or an antigen-binding fragment thereof) of the present technology, wherein the antibody is configured to localize to cancer cells expressing CD3 and is labeled with a radioisotope; and (b) detecting the presence of a tumor in the subject by detecting a radioactivity level emitted by the antibody that is higher than a reference value. In some embodiments, the reference value is expressed as injected dose per gram (%ID / g). The reference value can be calculated by measuring the radioactivity level present in non-tumor (normal) tissue and calculating the average radioactivity level present in the non-tumor (normal) tissue ± standard deviation. In some embodiments, the ratio of radioactivity levels between tumor tissue and normal tissue is about 2:1, 3:1, 4:1, 5:1, 6:1, 7:1, 8:1, 9:1, 10:1, 15:1, 20:1, 25:1, 30:1, 35:1, 40:1, 45:1, 50:1, 55:1, 60:1, 65:1, 70:1, 75:1, 80:1, 85:1, 90:1, 95:1, or 100:1. In some embodiments, the subject has been diagnosed with or is suspected of having cancer. The level of radioactivity emitted by the antibody can be detected using positron emission tomography or single photon emission tomography.
[0173] Additionally or alternatively, in some embodiments, the method further comprises administering to the subject an effective amount of an immunoconjugate comprising an antibody of the present technology conjugated to a radionuclide. In some embodiments, the radionuclide is an alpha particle-emitting isotope, a beta particle-emitting isotope, an Auger emitter, or any combination thereof. Examples of beta particle-emitting isotopes include: 86 Y, 90 Y, 89 Sr, 165 Dy, 186 Re, 188 Re, 177 Lu, and 67 Examples of alpha particle emitting isotopes include Cu. 213Bi, 211 At, 225 Ac, 152 Dy, 212 Bi, 223 Ra, 219 Rn, 215 Po, 211 Bi, 221 Fr, 217 At, and 255 Examples of Auger emitters include: 111 In, 67 Ga, 51 Cr, 58 Co, 99m Tc, 103m Rh, 195m Pt, 119 Sb, 161 Ho, 189m Os, 192 Ir, 201 Tl, and 203 Pb. In some embodiments of the above methods, nonspecific FcR-dependent binding in normal tissues is eliminated or reduced (e.g., via an N297A mutation in the Fc region resulting in aglycosylation). The therapeutic efficacy of such immunoconjugates can be determined by calculating the area under the curve (AUC) tumor:AUC normal tissue ratio. In some embodiments, the immunoconjugate has an AUC tumor:AUC normal tissue ratio of about 2:1, 3:1, 4:1, 5:1, 6:1, 7:1, 8:1, 9:1, 10:1, 15:1, 20:1, 25:1, 30:1, 35:1, 40:1, 45:1, 50:1, 55:1, 60:1, 65:1, 70:1, 75:1, 80:1, 85:1, 90:1, 95:1, or 100:1.
[0174] In one aspect, the present disclosure provides a method for detecting a tumor in a subject in need thereof, the method comprising: (a) administering to the subject an effective amount of a conjugate comprising a radiolabeled DOTA hapten and a multispecific antibody or antigen-binding fragment of the present technology that binds to the radiolabeled DOTA hapten, a tumor antigen, and a CD3 antigen, wherein the conjugate is configured to localize to a tumor that expresses the tumor antigen recognized by the multispecific antibody or antigen-binding fragment of the conjugate; and (b) detecting the presence of a tumor in the subject by detecting a radioactivity level emitted by the conjugate that is higher than a reference value. In some embodiments, the subject is a human. In one aspect, the present disclosure provides a method for selecting a subject for pre-targeted radioimmunotherapy, the method comprising: (a) administering to the subject an effective amount of a conjugate comprising a radiolabeled DOTA hapten and a multispecific antibody or antigen-binding fragment of the present technology that binds to the radiolabeled DOTA hapten, a tumor antigen, and a CD3 antigen, wherein the conjugate is configured to localize to a tumor that expresses the tumor antigen recognized by the multispecific antibody or antigen-binding fragment of the conjugate; (b) detecting the level of radioactivity emitted by the conjugate; and (c) selecting the subject for pre-targeted radioimmunotherapy if the level of radioactivity emitted by the conjugate is higher than a reference value. In some embodiments, the subject is a human.
[0175] Also disclosed herein is a method for selecting a subject for pre-targeted radioimmunotherapy, the method comprising: (a) administering to the subject an effective amount of a multispecific antibody or antigen-binding fragment of the present technology that binds to a radiolabeled DOTA hapten, a tumor antigen, and a CD3 antigen, wherein the multispecific antibody is configured to localize to a tumor that expresses the tumor antigen recognized by the multispecific antibody or antigen-binding fragment; (b) administering to the subject an effective amount of a radiolabeled DOTA hapten, wherein the radiolabeled DOTA hapten is configured to bind to the multispecific antibody or antigen-binding fragment; (c) detecting the level of radioactivity emitted by the multispecific antibody; and (d) selecting the subject for pre-targeted radioimmunotherapy if the level of radioactivity emitted by the multispecific antibody is higher than a reference value.
[0176] DOTAハプテンのとして、(i)DOTA-Phe-Lys(HSG)-D-Tyr-Lys(HSG)-NH2、(ii)Ac-Lys(HSG)D-Tyr-Lys(HSG)-Ni-CTA(Tyr-Lys(HSG)-Ni-CTA(T -D-Asp-D-Lys(HSG)-D-Asp-D-Lys(HSG)-NH2;(iv)DOTA-D-Glu-D-Lys(HSG)-D-Glu-D-Lys(HSG)-NH2;(v)DOTA-D-Tyr-D-Lys(HSG)- D-Glu-D-Lys(HSG)-NH2;(vi)DOTA-D-Ala-D-Lys(HSG)-D-Glu-D-Lys(HSG)-NH2;(vii)DOTA-D-Phe-D-Lys(HSG)-D-Tyr-D-Lys(HSG) -NH2;(viii)Ac-D-Phe-D-Lys(DOTA)-D-Tyr-D-Lys(DOTA)-NH2;(ix)Ac-D-Phe-D-Lys(DTPA)-D-Tyr-D-Lys(DTPA)-NH2;(x)Ac-D-Ph e-D-Lys(Bz-DTPA)-D-Tyr-D-Lys(Bz-DTPA)-NH2;(xi)Ac-D-Lys(HSG)-D-Tyr-D-Lys(HSG)-D-Lys(Tscg-Cys)-NH2;(xii)DOTA-D-Ph e-D-Lys(HSG)-D-Tyr-D-Lys(HSG)-D-Lys(Tscg-Cys)-NH2;(xiii)(Tscg-Cys)-D-Phe-D-Lys(HSG)-D-Tyr-D-Lys(HSG)-D-Lys(DOTA )-NH2;(xiv)Tscg-D-Cys-D-Glu-D-Lys(HSG)-D-Glu-D-Lys(HSG)-NH2;(xv)(Tscg-Cys)-D-Glu-D-Lys(HSG)-D-Glu-D-Lys(HSG)-NH 2;(xvi)Ac-D-Cys-D-Lys(DOTA)-D-Tyr-D-Ala-D-Lys(DOTA)-D-Cys-NH2;(xvii)Ac-D-Cys-D-Lys(DTPA)-D-Tyr-D-Lys(DTPA)-NH2;(xviii) Ac-D-Lys(DTPA)-D-Tyr-D-Lys(DTPA)-D-Lys(Tscg-Cys)-NH2, (xix) Ac-D-Lys(DOTA)-D-Tyr-D-Lys(DOTA)-D-Lys(Tscg-Cys)-NH2 and (xx) DOTA. The radiolabel can be an alpha particle emitting isotope, a beta particle emitting isotope, or an Auger emitter. Examples of radiolabels include: 213 Bi, 211 At, 225 Ac, 152 Dy, 212 Bi, 223 Ra, 219 Rn, 215 Po, 211 Bi, 221 Fr, 217 At, 255 Fm, 86 Y, 90 Y, 89 Sr, 165 Dy, 186 Re, 188 Re, 177 Lu, 67 Cu, 111 In, 67 Ga, 51 Cr, 58 Co, 99m Tc, 103m Rh, 195m Pt, 119 Sb, 161 Ho, 189m Os, 192 Ir, 201 Tl, 203 Pb, 68 Ga, 227 Th, or 64 Cu is an example.
[0177] In some embodiments of the methods disclosed herein, the level of radioactivity emitted by the conjugate is detected using positron emission tomography or single photon emission tomography. Additionally, or alternatively, in some embodiments of the methods disclosed herein, the subject is diagnosed with multiple sclerosis (MS), rheumatoid arthritis (RA), systemic lupus erythematosus, celiac disease, sympathetic ophthalmia, type 1 diabetes, graft-versus-host disease, precursor T acute lymphoblastic leukemia / lymphoma, anaplastic large cell lymphoma, lymphomatoid papulosis type A, mycosis fungoides, Pagetoid reticulosis, granulomatous lax skin, Sézary syndrome, adult Diagnosed with or suspected of having human T-cell leukemia / lymphoma, cutaneous large T-cell lymphoma, pleomorphic T-cell lymphoma, lymphomatoid papulosis type B, secondary cutaneous CD30+ large cell lymphoma, hepatosplenic T-cell lymphoma, angioimmunoblastic T-cell lymphoma, enteropathy-associated T-cell lymphoma, peripheral T-cell lymphoma not otherwise specified, subcutaneous T-cell lymphoma, large granular lymphocytic leukemia, and acute mixed leukemia. In other embodiments of the methods disclosed herein, the subject is diagnosed with or suspected of having adrenal gland cancer, bladder cancer, blood cancer, bone cancer, brain cancer, breast cancer, carcinoma, cervical cancer, colon cancer, colorectal cancer, uterine cancer, ear, nose and throat (ENT) cancer, endometrial cancer, esophageal cancer, gastrointestinal cancer, head and neck cancer, Hodgkin's disease, intestinal cancer, kidney cancer, pharyngeal cancer, acute and chronic leukemia, liver cancer, lymph node cancer, lymphoma, lung cancer, melanoma, mesothelioma, myeloma, nasopharyngeal cancer, neuroblastoma, non-Hodgkin's lymphoma, oral cancer, ovarian cancer, pancreatic cancer, penile cancer, pharyngeal cancer, prostate cancer, rectal cancer, sarcoma, seminoma, skin cancer, stomach cancer, teratoma, testicular cancer, thyroid cancer, uterine cancer, vaginal cancer, vascular tumors, and metastases thereof. Additionally or alternatively, in some embodiments of the methods disclosed herein, the conjugate is administered intravenously, intramuscularly, intraarterially, intrathecally, intracapsularly, intraorbitally, intradermally, intraperitoneally, intratracheally, subcutaneously, intracerebroventricularly, orally, intratumorally, or intranasally, hi certain embodiments, the conjugate is administered into the cerebrospinal fluid or blood of the subject.
[0178] In some embodiments of the methods disclosed herein, the level of radioactivity emitted by the conjugate is detected 2 to 120 hours after administration of the conjugate. In certain embodiments of the methods disclosed herein, the level of radioactivity emitted by the conjugate is expressed as a percentage of the injected dose per gram of tissue (%ID / g). A reference value can be calculated by measuring the level of radioactivity present in non-tumor (normal) tissue and calculating the average level of radioactivity present in the non-tumor (normal) tissue ± the standard deviation. In some embodiments, the reference value is the standard uptake value (SUV). See Thie JA, J Nucl Med. 45(9):1431-4 (2004). In some embodiments, the ratio of radioactivity levels between tumor tissue and normal tissue is about 2:1, 3:1, 4:1, 5:1, 6:1, 7:1, 8:1, 9:1, 10:1, 15:1, 20:1, 25:1, 30:1, 35:1, 40:1, 45:1, 50:1, 55:1, 60:1, 65:1, 70:1, 75:1, 80:1, 85:1, 90:1, 95:1, or 100:1.
[0179] In another aspect, the present disclosure provides a method for increasing tumor sensitivity to radiation therapy in a subject diagnosed with cancer, the method comprising: (a) administering to the subject an effective amount of a multispecific antibody or antigen-binding fragment of the present technology that binds to a radiolabeled DOTA hapten, a tumor antigen, and a CD3 antigen, wherein the multispecific antibody is configured to localize to a tumor expressing the tumor antigen recognized by the multispecific antibody or antigen-binding fragment, and (b) administering to the subject an effective amount of a radiolabeled DOTA hapten, wherein the radiolabeled DOTA hapten is configured to bind to the multispecific antibody or antigen-binding fragment. In some embodiments, the subject is a human. The anti-DOTA multispecific antibody is administered (e.g., according to a dosing regimen) under conditions and for a period of time sufficient to allow it to saturate tumor cells. In some embodiments, unbound anti-DOTA multispecific antibody is cleared from the bloodstream after administration of the anti-DOTA multispecific antibody. In some embodiments, a radiolabeled DOTA hapten is administered after a period that may be sufficient to allow clearance of unbound anti-DOTA multispecific antibody.
[0180] The radiolabeled DOTA hapten can be administered any time from 1 minute to 4 or more days after administration of the anti-DOTA multispecific antibody. For example, in some embodiments, the radiolabeled DOTA hapten is administered 1 minute, 2 minutes, 3 minutes, 4 minutes, 5 minutes, 10 minutes, 15 minutes, 20 minutes, 25 minutes, 30 minutes, 35 minutes, 40 minutes, 50 minutes, 55 minutes, 1 hour, 1.25 hours, 1.5 hours, 1.75 hours, 2 hours, 2.5 hours, 3 hours, 3.5 hours, 4 hours, 4.5 hours, 5 hours, 6 hours, 7 hours, 8 hours, 9 hours, 10 hours, 11 hours, 12 hours, 13 hours, 14 hours, 15 hours, 16 hours, 17 hours, 18 hours, 19 hours, 20 hours, 21 hours, 22 hours, 23 hours, 24 hours, 25 hours, 26 hours, 27 hours, 28 hours, 29 hours, 30 hours, 31 hours, 32 hours, 33 hours, 34 hours, 35 hours, 36 hours, 37 hours, 38 hours, 39 hours, 40 hours, 41 hours, 42 hours, 43 hours, 44 hours, 45 hours, 46 hours, 47 hours, 48 hours, 49 hours, 50 hours, 51 hours, 52 hours, 53 hours, 54 hours, 55 hours, 56 hours, 57 hours, 58 hours, 59 hours, 60 hours, 61 hours, 62 hours, 63 hours, 64 hours, 65 hours, 66 hours, 67 hours, 68 hours, 69 hours, 70 hours, 71 hours, 72 hours, 73 The radiolabeled DOTA hapten may be administered 5.5 hours, 6 hours, 6.5 hours, 7 hours, 7.5 hours, 8 hours, 8.5 hours, 9 hours, 9.5 hours, 10 hours, 11 hours, 12 hours, 13 hours, 14 hours, 15 hours, 16 hours, 17 hours, 18 hours, 19 hours, 20 hours, 21 hours, 22 hours, 23 hours, 24 hours, 48 hours, 72 hours, 96 hours, or any range therein. Alternatively, the radiolabeled DOTA hapten may be administered any time 4 or more days after administration of the anti-DOTA multispecific antibody.
[0181] Additionally or alternatively, in some embodiments, the method further comprises administering an effective amount of a detergent to the subject prior to administration of the radiolabeled DOTA hapten. The detergent can be any molecule (dextran, dendrimer, or polymer) that can be conjugated to a C825-hapten. In some embodiments, the detergent is 2000 kD, 1500 kD, 1000 kD, 900 kD, 800 kD, 700 kD, 600 kD, 500 kD, 400 kD, 300 kD, 200 kD, 100 kD, 90 kD, 80 kD, 70 kD, 60 kD, 50 kD, 40 kD, 30 kD, 20 kD, 10 kD, or 5 kD or less. In some embodiments, the detergent is a 500 kD aminodextran-DOTA conjugate (e.g., 500 kD-dextran-DOTA-Bn(Y), 500 kD-dextran-DOTA-Bn(Lu), or 500 kD-dextran-DOTA-Bn(In), etc.).
[0182] In some embodiments, the clearing agent and the radiolabeled DOTA hapten are administered without further administration of an anti-DOTA multispecific antibody or antigen-binding fragment of the present technology. For example, in some embodiments, the anti-DOTA multispecific antibody or antigen-binding fragment of the present technology is administered according to a regimen comprising at least one cycle of: (i) administration of an anti-DOTA multispecific antibody or antigen-binding fragment of the present technology (optionally to saturate relevant tumor cells); (ii) administration of a radiolabeled DOTA hapten and optionally a clearing agent; (iii) any additional administration of the radiolabeled DOTA hapten and / or clearing agent without further administration of an anti-DOTA multispecific antibody. In some embodiments, the method may comprise multiple such cycles (e.g., 1, 2, 3, 4, 5, 6, 7, 8, 9, 10 or more cycles). Additionally or alternatively, in some embodiments of the above methods, the anti-DOTA multispecific antibody and / or radiolabeled DOTA hapten is administered intravenously, intramuscularly, intraarterially, intrathecally, intracapsularly, intraorbitally, intradermally, intraperitoneally, intratracheally, subcutaneously, intracerebroventricularly, intratumorally, orally, or intranasally.
[0183] In one aspect, the present disclosure provides a method for increasing tumor sensitivity to radiation therapy in a subject diagnosed with cancer, the method comprising administering to the subject an effective amount of a conjugate comprising a radiolabeled DOTA hapten and a multispecific antibody or antigen-binding fragment of the present technology that recognizes and binds to the radiolabeled DOTA hapten, CD3 antigen, and a tumor antigen, wherein the conjugate is configured to localize to a tumor expressing the tumor antigen recognized by the multispecific antibody or antigen-binding fragment of the conjugate. The conjugate may be administered intravenously, intramuscularly, intraarterially, intrathecally, intracapsularly, intraorbitally, intradermally, intraperitoneally, intratracheally, subcutaneously, intracerebroventricularly, orally, intratumorally, or intranasally. In some embodiments, the subject is a human. In another aspect, the present disclosure provides a method of treating cancer in a subject in need thereof, comprising: (a) administering to the subject an effective amount of an anti-DOTA multispecific antibody or antigen-binding fragment of the present technology, wherein the anti-DOTA multispecific antibody is configured to (i) bind to a CD3 antigen and (ii) bind to and localize a tumor antigen; and (b) administering to the subject an effective amount of a radiolabeled DOTA hapten, wherein the radiolabeled DOTA hapten is configured to bind to the anti-DOTA multispecific antibody or antigen-binding fragment. The anti-DOTA multispecific antibody is administered (e.g., according to a dosing regimen) under conditions and for a period sufficient to saturate tumor cells. In some embodiments, unbound anti-DOTA multispecific antibody is removed from the bloodstream after administration of the anti-DOTA multispecific antibody. In some embodiments, the radiolabeled DOTA hapten is administered after a period that may be sufficient to allow clearance of unbound anti-DOTA multispecific antibody. In some embodiments, the subject is human.
[0184] Thus, in some embodiments, the method further comprises administering an effective amount of a detergent to the subject prior to administration of the radiolabeled DOTA hapten. The radiolabeled DOTA hapten can be administered any time from 1 minute to 4 or more days after administration of the anti-DOTA multispecific antibody. For example, in some embodiments, the radiolabeled DOTA hapten can be administered 1 minute, 2 minutes, 3 minutes, 4 minutes, 5 minutes, 10 minutes, 15 minutes, 20 minutes, 25 minutes, 30 minutes, 35 minutes, 40 minutes, 45 minutes, 50 minutes, 55 minutes, 1 hour, 1.25 hours, 1.5 hours, 1.75 hours, 2 hours, 2.5 hours, 3 hours, 3.5 hours, 4 hours, 4.5 hours, 5 hours, or 6 hours after administration of the anti-DOTA multispecific antibody. The radiolabeled DOTA hapten may be administered 4 or more days after administration of the anti-DOTA multispecific antibody.
[0185] The detergent can be a 500 kD aminodextran-DOTA conjugate (e.g., 500 kD-dextran-DOTA-Bn(Y), 500 kD dextran-DOTA-Bn(Lu), or 500 kD dextran-DOTA-Bn(In), etc.). In some embodiments, the detergent and radiolabeled DOTA hapten are administered without further administration of an anti-DOTA multispecific antibody. For example, in some embodiments, the anti-DOTA multispecific antibody is administered according to a regimen comprising at least one cycle of: (i) administration of an anti-DOTA multispecific antibody or antigen-binding fragment of the present technology (optionally to saturate relevant tumor cells); (ii) administration of a radiolabeled DOTA hapten and optionally a clearing agent; and (iii) any additional administration of the radiolabeled DOTA hapten and / or clearing agent without further administration of the anti-DOTA multispecific antibody. In some embodiments, the method may include multiple such cycles (eg, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10 or more cycles).
[0186] Also provided herein is a method for treating cancer in a subject in need thereof, comprising administering to the subject an effective amount of a conjugate comprising a radiolabeled DOTA hapten and a multispecific antibody or antigen-binding fragment of the present technology that recognizes and binds to the radiolabeled DOTA hapten, a CD3 antigen, and a tumor antigen, wherein the conjugate is configured to localize to a tumor that expresses the tumor antigen recognized by the multispecific antibody of the conjugate. The therapeutic efficacy of such a conjugate can be determined by calculating the ratio of the area under the curve (AUC) tumor:AUC normal tissue. In some embodiments, the complex has an AUC tumor:AUC normal tissue ratio of about 2:1, 3:1, 4:1, 5:1, 6:1, 7:1, 8:1, 9:1, 10:1, 15:1, 20:1, 25:1, 30:1, 35:1, 40:1, 45:1, 50:1, 55:1, 60:1, 65:1, 70:1, 75:1, 80:1, 85:1, 90:1, 95:1 or 100:1.
[0187] In any and all embodiments of the methods disclosed herein, the tumor antigen may be CD3, GPA33, HER2 / neu, GD2, MAGE-1, MAGE-3, BAGE, GAGE-1, GAGE-2, MUM-1, CDK4, N-acetylglucosamine transferase, p15, gp75, beta-catenin, ErbB2, cancer antigen 125 (CA-125), carcinoembryonic antigen (CEA), RAGE, MART (melanoma antigen), MUC-1, MUC-2, MUC-3, MUC-4, MUC-5ac, MUC-16, MUC-17, tyrosinase, Pmel 17 (gp100), GnT-V intron V sequence (N-acetylglucosamine transferase V intron V sequence), prostate cancer psm, PRAME (melanoma antigen), β-catenin, EBNA (Epstein-Barr virus nuclear antigen) 1-6, LMP2, p53, lung resistance protein (LRP), Bcl-2, prostate-specific antigen (PSA), Ki-67, CEACAM6, colon-specific antigen-p (CSA p), HLA-DR, CD40, CD74, CD138, EGFR, EGP-1, EGP-2, VEGF, PlGF, insulin-like growth factor (ILGF), tenascin, platelet-derived growth factor, IL-6, CD20, CD19, PSMA, CD33, CD123, MET, DLL4, Ang-2, HER3, IGF-1R, CD30, TAG-72, SPEAP, CD45, L1-CAM, Lewis Y (Le y ) antigen, E-cadherin, V-cadherin, GPC3, EpCAM, CD4, CD8, CD21, CD23, CD46, CD80, HLA-DR, CD74, CD22, CD14, CD15, CD16, CD123, TCR gamma / delta, NKp46, KIR, CD56, DLL3, PD-1, PD-L1, CD28, CD137, CD99, globo H, CD24, STEAP1, B7H3, polysialic acid, OX40, OX40-ligand, peptide-MHC complexes (with peptides derived from TP53, KRAS, MYC, EBNA1-6, PRAME, MART, tyrosinase, MAGEA1-A6, pmel17, LMP2, or WT1), or small molecule DOTA hapten.
[0188] Toxicity. Optimally, an effective amount (e.g., dose) of the anti-CD3 antibodies described herein provides therapeutic benefit without substantial toxicity to the patient. Toxicity of the anti-CD3 antibodies described herein can be assessed by standard pharmaceutical procedures in cell culture or experimental animals, e.g., LD 50 (the dose lethal to 50% of the population) or LD 100 The therapeutic index can be determined by determining the dose (the dose lethal to 100% of the population). The dose ratio between toxic and therapeutic effects is the therapeutic index. Data obtained from these cell culture assays and animal studies can be used to formulate a non-toxic dosage range for use in humans. The dosages of the anti-CD3 antibodies described herein lie within a range of circulating concentrations that include the effective dose with little or no toxicity. Dosages can vary within this range depending on the dosage form employed and the route of administration utilized. The exact formulation, route of administration, and dosage can be chosen by the individual physician in view of the subject's condition. See, e.g., Fingl et al., In: The Pharmacological Basis of Therapeutics, Ch. 1 (1975).
[0189] Formulation of Pharmaceutical Compositions. According to the methods of the present technology, the anti-CD3 antibodies may be incorporated into pharmaceutical compositions suitable for administration. Pharmaceutical compositions generally comprise a recombinant antibody or a substantially purified antibody and a pharmaceutically acceptable carrier in a form suitable for administration to a subject. Pharmaceutically acceptable carriers are determined, in part, by the particular composition being administered, as well as by the particular method used to administer the composition. Accordingly, there are a wide variety of suitable formulations of pharmaceutical compositions for administering antibody compositions (see, e.g., Remington's Pharmaceutical Sciences, Mack Publishing Co., Easton, PA 18 th (See, e.g., ed., 1990.) Pharmaceutical compositions are generally formulated as sterile, substantially isotonic, and in full compliance with all Good Manufacturing Practice (GMP) regulations of the U.S. Food and Drug Administration.
[0190] The terms "pharmaceutically acceptable," "physiologically acceptable," and grammatical variations thereof, when referring to compositions, carriers, diluents, and reagents, are used interchangeably to indicate that the material can be administered to or on a subject without producing undesirable physiological effects that would prohibit administration of the composition. For example, a "pharmaceutically acceptable excipient" refers to an excipient that is generally safe, non-toxic, and useful in preparing a desired pharmaceutical composition, including excipients acceptable for veterinary use and for human pharmaceutical use. Such excipients can be solid, liquid, semi-solid, or, in the case of aerosol compositions, gaseous. "Pharmaceutically acceptable salts and esters" refer to salts and esters that are pharmaceutically acceptable and possess the desired pharmacological properties. Such salts include salts that can be formed when acidic protons present in the composition are capable of reacting with inorganic or organic bases. Suitable inorganic salts include those formed with alkali metals, such as sodium and potassium, magnesium, calcium, and aluminum. Suitable organic salts include those formed with organic bases such as the amine bases, e.g., ethanolamine, diethanolamine, triethanolamine, tromethamine, N-methylglucamine, and the like. Such salts also include acid addition salts formed with inorganic acids (e.g., hydrochloric acid and hydrobromic acid) and organic acids (e.g., acetic acid, citric acid, maleic acid, and alkanesulfonic and arenesulfonic acids, e.g., methanesulfonic acid and benzenesulfonic acid). Pharmaceutically acceptable esters include esters formed from carboxy, sulfonyloxy, and phosphonoxy groups present in the anti-CD3 antibody, e.g., C 1-6Examples of suitable salts include alkyl esters. When two acidic groups are present, the pharmaceutically acceptable salt or ester may be a monoacid-monosalt or ester, or a di-salt or ester; similarly, when more than two acidic groups are present, some or all of such groups may be salified or esterified. The anti-CD3 antibodies named in this technology can exist in unsalted or unesterified form, or in salified and / or esterified form, and the naming of such anti-CD3 antibodies is intended to encompass both the original (unsalted and unesterified) compound and its pharmaceutically acceptable salts and esters. Also, certain embodiments of the present technology may exist in more than one stereoisomeric form, and the naming of such anti-CD3 antibodies is intended to encompass all single stereoisomers and all mixtures (racemic or otherwise) of such stereoisomers. Those skilled in the art will be able to determine the timing, sequence, and dosage of administration appropriate for particular drugs and compositions of the present technology.
[0191] Examples of such carriers or diluents include, but are not limited to, water, saline, Ringer's solution, dextrose solution, and 5% human serum albumin. Non-aqueous vehicles such as liposomes and fixed oils can also be used. The use of such media and compounds for pharmaceutically active substances is well known in the art. However, as long as any convenient media or compound is incompatible with anti-CD3 antibodies, its use in the composition is contemplated. Supplementary active compounds can also be incorporated into the composition. The pharmaceutical compositions of the present technology are formulated to be compatible with the intended route of administration. The anti-CD3 antibody compositions of the present technology can be administered by parenteral, topical, intravenous, oral, subcutaneous, intra-arterial, intradermal, transdermal, rectal, intracranial, intrathecal, intraperitoneal, intranasal, or intramuscular routes, or as an inhalant. The anti-CD3 antibodies may also be administered in combination with other agents that are at least partially effective in treating various CD3-related conditions.
[0192] Solutions or suspensions used for parenteral, intradermal, or subcutaneous administration may contain the following components: a sterile diluent such as water for injection, saline, fixed oils, polyethylene glycol, glycerin, propylene glycol, or other synthetic solvents; an antibacterial compound such as benzyl alcohol or methylparaben; an antioxidant such as ascorbic acid or sodium bisulfite; a chelating compound such as ethylenediaminetetraacetic acid (EDTA); a buffer such as acetate, citrate, or phosphate, and a compound for adjusting osmolality such as sodium chloride or dextrose. pH can be adjusted with acids or bases such as hydrochloric acid or sodium hydroxide. Parenteral preparations can be enclosed in ampoules, disposable syringes, or multiple-dose vials made of glass or plastic.
[0193] Pharmaceutical compositions suitable for injectable use include sterile aqueous solutions (where water soluble) or dispersions and sterile powders for the extemporaneous preparation of sterile injectable solutions or dispersion. For intravenous administration, suitable carriers include physiological saline, bacteriostatic water, Cremophor EL™ (BASF, Parsippany, NJ), or phosphate buffered saline (PBS). In all cases, the composition must be sterile and should be fluid to the extent that easy syringability exists. The composition must be stable under the conditions of manufacture and storage and must be preserved against the contaminating action of microorganisms such as bacteria and fungi. The carrier can be a solvent or dispersion medium containing, for example, water, ethanol, polyol (for example, glycerol, propylene glycol, and liquid polyethylene glycol, and the like), and suitable mixtures thereof. Proper fluidity can be maintained, for example, by the use of a coating such as lecithin, by the maintenance of the required particle size in the case of dispersions, and by the use of surfactants. Prevention of the action of microorganisms can be achieved by various antibacterial and antifungal compounds, for example, parabens, chlorobutanol, phenol, ascorbic acid, thimerosal, etc. In many cases, it is desirable to include isotonic compounds, for example, sugars, polyalcohols such as mannitol, sorbitol, sodium chloride in the composition. Prolonged absorption of injectable compositions can be brought about by including in the composition a compound which delays absorption, for example, aluminum monostearate and gelatin.
[0194] Sterile injectable solutions can be prepared by incorporating the anti-CD3 antibody of the present technology in the required amount in a suitable solvent with one or a combination of the ingredients listed above, followed by filtration sterilization as needed. Generally, dispersions are prepared by incorporating the anti-CD3 antibody into a sterile vehicle containing the basic dispersion medium and the required other ingredients listed above. In the case of sterile powders for preparing sterile injectable solutions, the preparation method is vacuum drying and lyophilization, which produces a powder of the active ingredient plus any additional desired ingredients from a previously sterile-filtered solution thereof. The antibody of the present technology can be administered in the form of a depot injection or implant preparation, which can be formulated in a manner that allows sustained or pulsed release of the active ingredient. Oral compositions generally include an inert diluent or an edible carrier. Oral compositions can be enclosed in gelatin capsules or compressed into tablets. For the purpose of oral therapeutic administration, the anti-CD3 antibody can be incorporated with excipients and used in the form of tablets, lozenges, or capsules. Oral compositions can also be prepared using a fluid carrier for use as a mouthwash, where the compound in the fluid carrier is orally administered, swished, expectorated, or swallowed. Pharmaceutically compatible binding compounds and / or adjuvant materials can be included as part of the composition. The tablets, pills, capsules, troches and the like can contain any of the following ingredients, or compounds of a similar nature: a binder such as microcrystalline cellulose, gum tragacanth or gelatin; an excipient such as starch or lactose; a disintegrating compound such as alginic acid, Primogel, or corn starch; a lubricant such as magnesium stearate or Sterotes; a glidant such as colloidal silicon dioxide; a sweetening compound such as sucrose or saccharin; or a flavoring compound such as peppermint, methyl salicylate, or citrus flavoring.
[0195] For administration by inhalation, the anti-CD3 antibodies are delivered in the form of an aerosol spray from pressured container or dispenser which contains a suitable propellant, eg, a gas such as carbon dioxide, or a nebulizer. Systemic administration can also be via transmucosal or transdermal means. For transmucosal or transdermal administration, penetrants appropriate to the barrier to be permeated are used in the formulation. Such penetrants are generally known in the art and include, for example, for transmucosal administration, detergents, bile salts, and fusidic acid derivatives. Transmucosal administration can be accomplished using nasal sprays or suppositories. For transdermal administration, the anti-CD3 antibody is formulated into ointments, salves, gels, or creams, as generally known in the art. Anti-CD3 antibodies can also be prepared as pharmaceutical compositions in the form of suppositories (e.g., with conventional suppository bases such as cocoa butter and other glycerides) or retention enemas for rectal delivery.
[0196] In one embodiment, anti-CD3 antibodies are formulated with carriers that protect them against rapid elimination from the body, such as controlled-release formulations, including implants and microencapsulated delivery systems. Biodegradable, biocompatible polymers, such as ethylene vinyl acetate, polyanhydrides, polyglycolic acid, collagen, polyorthoesters, and polylactic acid, can be used. Methods for preparing such formulations will be apparent to those skilled in the art. Materials may be commercially available from Alza and Nova Pharmaceuticals. Liposomal suspensions (including liposomes that target infected cells with monoclonal antibodies against viral antigens) may also be used as pharmaceutically acceptable carriers. These may be prepared according to methods known to those skilled in the art, for example, as described in U.S. Pat. No. 4,522,811.
[0197] C. Kit The present technology provides kits for detecting and / or treating CD3-associated pathologies, comprising at least one immunoglobulin-related composition of the present technology (e.g., any antibody or antigen-binding fragment described herein) or a functional variant thereof (e.g., a substitution variant). Optionally, the above-described components of the kits of the present technology are packaged in appropriate solutions and labeled for the diagnosis and / or treatment of CD3-associated pathologies. The above-described components may be stored in unit-dose or multi-dose containers, such as sealed ampoules, vials, bottles, syringes, and test tubes, as aqueous solutions, preferably sterile aqueous solutions, or as lyophilized formulations, preferably sterile, for reconstitution. The kit may further comprise a second container holding a diluent suitable for diluting the pharmaceutical composition to a higher volume. Suitable diluents include, but are not limited to, pharmaceutically acceptable excipients of the pharmaceutical composition and physiological saline. Furthermore, the kit may include instructions for diluting the pharmaceutical composition and / or instructions for administering the pharmaceutical composition, whether diluted or not. The containers may be formed from a variety of materials, such as glass or plastic...
Claims
1. Heavy chain immunoglobulin variable domain (V H ) and a light chain immunoglobulin variable domain (V L and wherein: (a) The applicable V H But GYTFTRYT's V H - CDR1 sequence (SEQ ID NO: 2), V of INPSRGYT H - CDR2 sequence (SEQ ID NO: 3), and V of ARYYDDHYSLDY (SEQ ID NO: 6) H - comprising a CDR3 sequence, and (b) The V L But, SSVSY's V L - CDR1 sequence (SEQ ID NO: 12), V of DT L -CDR2 sequence (SEQ ID NO: 13), and V of QQWSSNPFT L - comprising the CDR3 sequence (SEQ ID NO: 14), the antibody or antigen-binding fragment thereof binds to a CD3ε subunit comprising residues 79ε to 85ε (FG loop), residue 34ε (the first residue of the βC chain), and residues 46ε and 48ε (C′-D loop); (a) the V H comprises the amino acid sequence of SEQ ID NO: 7, and the V L comprises an amino acid sequence selected from any one of SEQ ID NOs: 16, 18, 19, and 20; (b) the V H comprises the amino acid sequence of SEQ ID NO: 8, and the V L comprises an amino acid sequence selected from any one of SEQ ID NOs: 16, 17, 18, 19, and 20; (c) the V H comprises the amino acid sequence of SEQ ID NO: 9 and the V L comprises an amino acid sequence selected from any one of SEQ ID NOs: 16, 17, 18, 19 and 20; or (d) An antibody or antigen-binding fragment thereof, wherein the V H comprises the amino acid sequence of SEQ ID NO: 10, and the V L comprises an amino acid sequence selected from any one of SEQ ID NOs: 16, 18, 19, and 20.
2. The antibody or antigen-binding fragment thereof further comprises an Fc domain of an isotype selected from the group consisting of IgG1, IgG2, IgG3, IgG4, IgA1, IgA2, IgM, IgD, IgE, IgG1 with an N297A or K322A substitution, and IgG4 with an S228P mutation; or The antigen-binding fragment may be Fab, F(ab') 2 , Fab', scF v , and F v or is selected from the group consisting of the antibody lacks α-1,6-fucose modifications, or the antibody is a monoclonal antibody, a chimeric antibody, a humanized antibody, a bispecific antibody, or a multispecific antibody; or The antibody or antigen-binding fragment thereof is capable of inhibiting T cells, B cells, myeloid cells, plasma cells, mast cells, CD3, GPA33, HER2 / neu, GD2, MAGE-1, MAGE-3, BAGE, GAGE-1, GAGE-2, MUM-1, CDK4, N-acetylglucosamine transferase, p15, gp75, beta-catenin, ErbB2, cancer antigen 125 (CA-125), carcinoembryonic antigen (CEA), RAGE, MART (melanoma antigen), MUC-1, MUC-2, MUC-3, MUC-4, MUC-5ac, MUC-16, MUC-17, tyrosinase, Pmel 17 (gp100), GnT-V intron V sequence (N-acetylglucosamine transferase V intron V sequence), prostate cancer psm, PRAME (melanoma antigen), β-catenin, EBNA (Epstein-Barr virus nuclear antigen) 1-6, LMP2, p53, lung resistance protein (LRP), Bcl-2, prostate-specific antigen (PSA), Ki-67, CEACAM6, colon-specific antigen-p (CSA p), HLA-DR, CD40, CD74, CD138, EGFR, EGP-1, EGP-2, VEGF, PlGF, insulin-like growth factor (ILGF), tenascin, platelet-derived growth factor, IL-6, CD20, CD19, PSMA, CD33, CD123, MET, DLL4, Ang-2, HER3, IGF-1R, CD30, TAG-72, SPEAP, CD45, L1-CAM, Lewis Y (Le y ) antigen, E-cadherin, V-cadherin, GPC3, EpCAM, CD4, CD8, CD21, CD23, CD46, CD80, HLA-DR, CD74, CD22, CD14, CD15, CD16, CD123, TCR gamma / delta, NKp46, KIR, CD56, DLL3, PD-1, PD-L1, CD28, CD137, CD99, Globo H, CD24, STEAP1, B7 The antibody or antigen-binding fragment thereof of claim 1, which is a multispecific antibody or antigen-binding fragment thereof that binds to H3, polysialic acid, OX40, OX40-ligand, peptide-MHC complex (having a peptide derived from TP53, KRAS, MYC, EBNA1-6, PRAME, MART, tyrosinase, MAGEA1-A6, pmel17, LMP2, or WT1), or small molecule DOTA hapten.
3. 3. The antibody of claim 1 or 2, further comprising a heavy chain (HC) amino acid sequence comprising SEQ ID NO:23, SEQ ID NO:96, SEQ ID NO:100, SEQ ID NO:104, SEQ ID NO:108, SEQ ID NO:112, SEQ ID NO:116, SEQ ID NO:126, SEQ ID NO:132, SEQ ID NO:137, SEQ ID NO:139, or a light chain (LC) amino acid sequence comprising SEQ ID NO:21, SEQ ID NO:92, SEQ ID NO:94, SEQ ID NO:98, SEQ ID NO:102, SEQ ID NO:106, SEQ ID NO:110, SEQ ID NO:114, SEQ ID NO:122, SEQ ID NO:124, SEQ ID NO:128, SEQ ID NO:
130.
4. SEQ ID NO: 23 and SEQ ID NO: 21, respectively; SEQ ID NO: 23 and SEQ ID NO: 92, SEQ ID NO: 96 and SEQ ID NO: 94, SEQ ID NO: 100 and SEQ ID NO: 98, SEQ ID NO: 104 and SEQ ID NO: 102, SEQ ID NO: 108 and SEQ ID NO: 106, SEQ ID NO: 112 and SEQ ID NO: 110, and SEQ ID NO: 116 and SEQ ID NO: 114 or comprising an HC amino acid sequence and an LC amino acid sequence selected from the group consisting of: The antibody of claim 3, comprising a first LC amino acid sequence, a second LC amino acid sequence, a first HC amino acid sequence, and a second HC amino acid sequence selected from the group consisting of SEQ ID NO: 122, SEQ ID NO: 124, SEQ ID NO: 126, and SEQ ID NO: 137, and SEQ ID NO: 128, SEQ ID NO: 130, SEQ ID NO: 132, and SEQ ID NO: 139, respectively.
5. The antibody or antigen-binding fragment thereof described in claim 1, wherein the antibody or antigen-binding fragment thereof is multispecific and comprises an amino acid sequence selected from any one of SEQ ID NOs: 118 to 121.
6. A recombinant nucleic acid encoding the antibody or antigen-binding fragment thereof according to any one of claims 1 to 5.
7. A host cell or vector comprising the recombinant nucleic acid sequence of claim 6.
8. A composition comprising the antibody or antigen-binding fragment thereof according to any one of claims 1 to 5 and a pharmaceutically acceptable carrier.
9. The antibody of claim 4 for use in treating a CD3-associated autoimmune disease in a subject in need thereof, wherein the antibody or its antigen-binding fragment specifically binds to CD3.
10. The antibody or antigen-binding fragment thereof for use according to claim 9, wherein the CD3-associated autoimmune disease is selected from the group consisting of multiple sclerosis (MS), rheumatoid arthritis (RA), systemic lupus erythematosus, celiac disease, sympathetic ophthalmia, type 1 diabetes, and graft-versus-host disease.
11. 6. The antibody of claim 4 or the antibody or antigen-binding fragment thereof of claim 5, for use in treating cancer in a subject in need thereof, wherein the antibody or antigen-binding fragment thereof specifically binds to CD3.
12. The cancer is selected from the group consisting of precursor T-acute lymphocytic leukemia / lymphoma, anaplastic large cell lymphoma, lymphomatoid papulosis type A, mycosis fungoides, Pagetoid reticulosis, granulomatous lax skin, Sezary syndrome, adult T-cell leukemia / lymphoma, cutaneous large T-cell lymphoma, pleomorphic T-cell lymphoma, lymphomatoid papulosis type B, secondary cutaneous CD30+ large cell lymphoma, hepatosplenic T-cell lymphoma, angioimmunoblastic T-cell lymphoma, enteropathy-associated T-cell lymphoma, peripheral T-cell lymphoma not otherwise specified, subcutaneous T-cell lymphoma, large granular lymphocytic leukemia, acute mixed leukemia, adrenal gland cancer, bladder cancer, blood cancer, bone cancer, brain cancer, breast cancer, cell carcinoma, cervical cancer, colon 12. The antibody or antigen-binding fragment thereof for use according to claim 11, wherein the antibody or antigen-binding fragment thereof is selected from the group consisting of breast cancer, colorectal cancer, uterine cancer, ear, nose and throat (ENT) cancer, endometrial cancer, esophageal cancer, gastrointestinal cancer, head and neck cancer, Hodgkin's disease, intestinal cancer, kidney cancer, pharyngeal cancer, acute and chronic leukemia, liver cancer, lymph node cancer, lymphoma, lung cancer, melanoma, mesothelioma, myeloma, nasopharyngeal cancer, neuroblastoma, non-Hodgkin's lymphoma, oral cancer, ovarian cancer, pancreatic cancer, penile cancer, pharyngeal cancer, prostate cancer, rectal cancer, sarcoma, seminoma, skin cancer, gastric cancer, teratoma, testicular cancer, thyroid cancer, uterine cancer, vaginal cancer, vascular tumors, and metastases thereof.
13. The antibody or antigen-binding fragment thereof for use according to any one of claims 9 to 12, wherein the antibody or antigen-binding fragment thereof is administered to the subject separately, sequentially, or simultaneously with a further therapeutic agent.
14. The antibody or antigen-binding fragment thereof according to any one of claims 1 to 5 for use in a method for detecting cancer in a subject in vivo, comprising: The method comprises: (a) administering to the subject an effective amount of the antibody or antigen-binding fragment thereof of any one of claims 1 to 5, wherein the antibody or antigen-binding fragment thereof is configured to localize to cancer cells that express CD3 and is labeled with a radioisotope; (b) detecting the presence of a tumor in the subject by detecting a level of radioactivity emitted by the antibody or antigen-binding fragment thereof that is higher than a reference value. Including, The subject has been diagnosed with or is suspected of having cancer, or the level of radioactivity emitted by the antibody or antigen-binding fragment thereof is detected using positron emission tomography or single photon emission tomography.
15. 15. The antibody or antigen-binding fragment thereof for use according to claim 14, wherein the method further comprises administering to the subject an effective amount of an immunoconjugate comprising the antibody or antigen-binding fragment thereof of any one of claims 1 to 5 conjugated to a radionuclide, the radionuclide is an alpha particle emitting isotope, a beta particle emitting isotope, an Auger emitter, or any combination thereof; or The radionuclide is 86 Y. 90 Y. 89 Sr, 165 Dy, 186 Re, 188 Re, 177 Lu, and 67 A beta particle emitting isotope selected from the group consisting of Cu, Cu, and Cu.
16. The multispecific antibody or antigen-binding fragment thereof of claim 2 , wherein the multispecific antibody binds to a radiolabeled DOTA hapten, a tumor antigen, and a CD3 antigen.
17. The tumor antigen is selected from the group consisting of CD3, GPA33, HER2 / neu, GD2, MAGE-1, MAGE-3, BAGE, GAGE-1, GAGE-2, MUM-1, CDK4, N-acetylglucosamine transferase, p15, gp75, beta-catenin, ErbB2, cancer antigen 125 (CA-125), carcinoembryonic antigen (CEA), RAGE, MART (melanoma antigen), MUC-1, MUC-2, MUC-3, MUC-4, MUC-5ac, MUC-16, MUC-17, tyrosinase, Pmel 17 (gp100), GnT-V intron V sequence (N-acetylglucosamine transferase V intron V sequence), prostate cancer psm, PRAME (melanoma antigen), β-catenin, EBNA (Epstein-Barr virus nuclear antigen) 1-6, LMP2, p53, lung resistance protein (LRP), Bcl-2, prostate-specific antigen (PSA), Ki-67, CEACAM6, colon-specific antigen-p (CSA p), HLA-DR, CD40, CD74, CD138, EGFR, EGP-1, EGP-2, VEGF, PlGF, insulin-like growth factor (ILGF), tenascin, platelet-derived growth factor, IL-6, CD20, CD19, PSMA, CD33, CD123, MET, DLL4, Ang-2, HER3, IGF-1R, CD30, TAG-72, SPEAP, CD45, L1-CAM, Lewis Y (Le y ) antigen, E-cadherin, V-cadherin, GPC3, EpCAM, CD4, CD8, CD21, CD23, CD46, CD80, HLA-DR, CD74, CD22, CD14, CD15, CD16, CD123, TCR gamma / delta, NKp46, KIR, CD56, DLL3, PD-1, PD-L1, CD28, CD137, CD99, Globo H, 17. The multispecific antibody or antigen-binding fragment thereof of claim 16, which is CD24, STEAP1, B7H3, polysialic acid, OX40, OX40-ligand, or a peptide-MHC complex (having a peptide derived from TP53, KRAS, MYC, EBNA1-6, PRAME, MART, tyrosinase, MAGEA1-A6, pmel17, LMP2, or WT1).
18. 20. A conjugate comprising a radiolabeled DOTA hapten and the multispecific antibody or antigen-binding fragment thereof of claim 16 or 17 for use in a method of increasing tumor sensitivity to radiation therapy in a subject diagnosed with cancer or a method of treating cancer in a subject in need thereof, wherein the conjugate is configured to localize to tumors expressing the tumor antigen recognized by the multispecific antibody or antigen-binding fragment thereof.
19. 18. A multispecific antibody or antigen-binding fragment thereof according to claim 16 or 17 for use in a method of increasing tumor sensitivity to radiation therapy in a subject diagnosed with cancer or in a method of treating cancer in a subject in need thereof, comprising: The method comprises: (a) administering to the subject an effective amount of a multispecific antibody or antigen-binding fragment thereof, wherein the multispecific antibody is configured to localize to tumors expressing the tumor antigen recognized by the multispecific antibody or antigen-binding fragment thereof; (b) administering to the subject an effective amount of a radiolabeled DOTA hapten, wherein the radiolabeled DOTA hapten is configured to bind to the multispecific antibody or antigen-binding fragment thereof; A multispecific antibody or antigen-binding fragment thereof comprising:
20. 20. The multispecific antibody or antigen-binding fragment thereof for use according to claim 19, further comprising administering an effective amount of a detergent to the subject prior to administration of the radiolabeled DOTA hapten.
21. A pharmaceutical composition comprising T cells bound to the multispecific antibody or antigen-binding fragment thereof of claim 16 or 17 and a pharmaceutically acceptable carrier.
22. The composition of claim 8, wherein the antibody or antigen-binding fragment thereof is conjugated to an agent selected from the group consisting of an isotope, a dye, a chromogen, a contrast agent, a drug, a toxin, a cytokine, an enzyme, an enzyme inhibitor, a hormone, a hormone antagonist, a growth factor, a radionuclide, a metal, a liposome, a nanoparticle, RNA, DNA, or any combination thereof.
Citation Information
Patent Citations
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