Lipids and Compositions
The lipid formulation with a hydrocarbon group of 32 to 48 carbon atoms and amino acid-derived hydrophilic regions addresses delivery challenges, enhancing the efficiency and safety of compound delivery to target cells or tissues.
Patent Information
- Application Number
- JP2023513066
- Authority / Receiving Office
- JP · JP
- Patent Type
- Patents
- Current Assignee / Owner
- Priority Date
- 2021-04-09
- Filing Date
- 2022-04-11
- Publication Date
- 2026-01-09
- Estimated Expiration
- 2042-04-11
AI Technical Summary
Existing carrier molecules face challenges in efficiently delivering compounds, such as nucleic acids, to target cells or tissues in vivo due to degradation by enzymes and limited membrane permeability, often requiring higher doses that increase cytotoxicity risks.
A lipid represented by formula (I) with a hydrocarbon group (R1) of 32 to 48 carbon atoms and hydrophilic regions derived from two amino acids or their derivatives, forming amphiphilic molecules that facilitate efficient delivery and stability of lipid nanoparticles like liposomes.
The lipid effectively delivers compounds to target cells or tissues, reducing cytotoxicity and improving membrane stability while ensuring efficient encapsulation and permeation.
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Abstract
Description
[Technical Field]
[0001] The present invention relates to lipids and compositions. [Background technology]
[0002] Carrier molecules such as lipids are commonly used to deliver compounds (e.g., nucleosides, nucleotides, polynucleotides, nucleic acids, and their derivatives, such as biologically active drugs including RNAi agents) into targets such as target cells or tissues in vivo. However, carrier molecules can be degraded by in vivo degradative enzymes or have limited permeability through cell membranes, making it difficult for the compounds to reach the target. Furthermore, even if a compound can be delivered to the target, if it cannot be delivered efficiently, a higher-than-desired dose of the delivered compound may be required to achieve the desired effect of the compound, potentially increasing the risk of cytotoxicity and side effects. Therefore, there is a need for carrier molecules that can efficiently penetrate target cells and tissues.
[0003] To address these problems, for example, Patent Document 1 discloses that encapsulating siRNA as a nucleic acid in lipid-containing microparticles protects the encapsulated siRNA from degradation in plasma and enables its permeation through lipid-soluble cell membranes. Patent Documents 2 to 4 disclose lipids with improved biodegradability that are used to deliver nucleic acid drugs such as siRNA. Patent Document 5 discloses cationic lipid compounds for delivering bioactive drugs such as RNAi agents. [Prior art documents] [Patent documents]
[0004] [Patent Document 1] Special Publication No. 2012-530059 [Patent Document 2] International Publication No. 2011 / 153493 [Patent Document 3] International Publication No. 2013 / 086354 [Patent Document 4] International Publication No. 2013 / 158579 [Patent Document 5] Japanese Patent Application Laid-Open No. 2016-514109 Summary of the Invention [Problem to be solved by the invention]
[0005] However, despite recent advances, there remains a need for lipids that can effectively deliver compounds for introduction into a subject, such as target cells or tissues in vivo (hereinafter also referred to as introduction compounds). Therefore, an object of the present invention is to provide lipids and compositions that can effectively deliver compounds to be introduced, such as nucleic acids, to target cells or tissues in vivo. [Means for solving the problem]
[0006] The lipid of the present invention is a lipid represented by the following formula (I): [ka] (In the formula, R 1 is a hydrocarbon group having 32 to 48 carbon atoms, and R 2 is the side chain of any one amino acid or a derivative of that amino acid, and R 3 is the side chain of a basic amino acid or a derivative of that amino acid.
[0007] The composition of the present invention is a composition containing the above lipid and an introduction compound. [Effects of the Invention]
[0008] According to the present invention, it is possible to provide lipids and compositions that can effectively deliver compounds to be introduced, such as nucleic acids, to target cells or tissues in vivo. DETAILED DESCRIPTION OF THE INVENTION
[0009] [Fat] Hereinafter, an embodiment of the present invention will be described by way of example. The lipid of this embodiment is represented by the following formula (I): [ka] (In the formula, R 1 is a hydrocarbon group having 32 to 48 carbon atoms, and R 2 is the side chain of any one amino acid or a derivative of that amino acid, and R 3 is the side chain of a basic amino acid or a derivative of that amino acid. More specifically, the lipids of this embodiment contain a hydrocarbon group (R 1 The molecule may be an amphiphilic molecule having a lipophilic region (tail) containing a hydrocarbon, and a hydrophilic region (head) containing two amino acids or their derivatives (dipeptides) linked to the hydrocarbon by an ester bond. With regard to the two amino acid moieties (residues) in the hydrophilic region, the amino acid or amino acid derivative corresponding to the first and second amino acid moieties counting from the lipophilic region are also referred to as the first amino acid and the second amino acid, respectively.
[0010] The lipid of this embodiment can effectively deliver a compound to be introduced, such as a nucleic acid, to a target cell or tissue in a living body. Specifically, since the hydrophilic region of the lipid of this embodiment is formed by a portion derived from two amino acids, the influence of the lipid of this embodiment on a living body can be appropriately suppressed. In addition, the lipid of this embodiment has a terminal (R 3 ) side is derived from a basic amino acid and has moderate cationicity, which makes it easy to prepare lipid nanoparticles such as liposomes containing the lipid in a state in which a compound to be introduced into cells, such as nucleic acids, is encapsulated, and the lipid nanoparticles can easily permeate the cell membrane of cells. Furthermore, such hydrophilic regions in the lipid of this embodiment can improve the compatibility between lipid nanoparticles such as liposomes and compounds to be introduced into cells. Furthermore, the lipophilic region is a hydrocarbon group having 32 to 48 carbon atoms (R 1) allows the membrane of lipid nanoparticles such as liposomes to be appropriately formed while ensuring the stability of the membrane. As described above, by using the lipid of this embodiment, a compound to be introduced, such as a nucleic acid, can be effectively delivered to target cells or tissues in the body.
[0011] The lipids of this embodiment include not only the compound represented by formula (I) but also pharmaceutically acceptable salts thereof. Pharmaceutically acceptable salts are salts that retain the biological effectiveness and properties of the compounds of the present invention and are typically not biologically or otherwise undesirable. More specifically, the lipid of this embodiment can be, for example, protonated at the hydrophilic region to form a cation or deprotonated to form an anion. The anion that can pair with the lipid cation is not particularly limited as long as it is pharmaceutically acceptable, and examples thereof include inorganic ions such as chloride ions, bromide ions, nitrate ions, sulfate ions, and phosphate ions; and organic acid ions such as acetate ions, oxalate ions, maleate ions, fumarate ions, citrate ions, benzoate ions, methanesulfonate ions, and trifluoroacetate ions. In addition, the cation that can pair with the lipid anion is not particularly limited as long as it is pharmaceutically acceptable, and examples thereof include ammonium ions, trialkylammonium ions, sodium ions, potassium ions, magnesium ions, and calcium ions.
[0012] In this embodiment, R in formula (I) 1 is a hydrocarbon group having 32 to 48 carbon atoms. By making the hydrocarbon group have 32 to 48 carbon atoms, the stability of the membrane of lipid nanoparticles such as liposomes can be improved and the membrane itself can be prevented from becoming too large. Here, examples of the "hydrocarbon group" include an alkyl group, a cycloalkyl group, an alkenyl group, a cycloalkenyl group, an alkynyl group, an aryl group, an aralkyl group, and a cycloalkylalkyl group, and preferred are alkyl groups, alkenyl groups, and alkynyl groups.
[0013] R 1 may be a branched hydrocarbon group or a linear hydrocarbon group, but is preferably a branched hydrocarbon group. 1 The number of carbon atoms is preferably 32 to 46, more preferably 32 to 44, and even more preferably 36 to 44. This further improves the stability of the lipid nanoparticle membrane and further prevents the membrane itself from becoming too large. Furthermore, in this embodiment, R 1 The hydrocarbon group may be saturated but is preferably unsaturated, and the unsaturated bond is more preferably in a cis configuration.
[0014] In this embodiment, R 1 is preferably a hydrocarbon group represented by the following formula (II). [ka] (In the formula, R 11 is a hydrocarbon group having a carbon number a, and R 12 is a hydrocarbon group having a carbon number b, where a and b satisfy the relationship 31≦a+b≦47.
[0015] R 11 and R 12 is not particularly limited, but may be, for example, a straight-chain hydrocarbon group, and is preferably a straight-chain hydrocarbon group having 1 to 46 carbon atoms. 11 and R 12 is more preferably a linear hydrocarbon group having 6 to 22 carbon atoms, more preferably a linear hydrocarbon group having 10 to 22 carbon atoms, even more preferably a linear hydrocarbon group having 17 to 22 carbon atoms, and even more preferably a linear hydrocarbon group having 18 to 22 carbon atoms. This further improves the stability of the lipid nanoparticle membrane and further prevents the membrane itself from becoming too large.
[0016] R 11 and R 12are hydrocarbon groups having the above carbon number, and at least one of them is preferably an unsaturated hydrocarbon group. 11 and R 12 Both of R are unsaturated hydrocarbon groups having the above carbon number. 11 and R 12 When at least one of the above is an unsaturated hydrocarbon group, the number of unsaturated bonds in one unsaturated hydrocarbon group is preferably 3 or less, more preferably 2 or less, and most preferably 1. Also, R 11 and R 12 When both are unsaturated hydrocarbon groups, R 11 and R 12 The position of the unsaturated group counted from the terminal carbon in R 11 and R 12 It is preferable that the positions are the same.
[0017] Also, R 11 The carbon number a and R 12 The number of carbon atoms b for the above is preferably 1≦ba≦20, more preferably 1≦ba≦18, even more preferably 1≦ba≦15, still more preferably 1≦ba≦10, and most preferably 1=ba. Furthermore, the carbon numbers a and b preferably satisfy 31≦a+b≦45, more preferably 31≦a+b≦43, and even more preferably 35≦a+b≦43.
[0018] R 11 and R 12is not particularly limited, but is preferably a linear saturated hydrocarbon group having 10 to 22 carbon atoms (i.e., n-decyl, n-undecyl, n-dodecyl, n-tridecyl, n-tetradecyl, n-pentadecyl, n-hexadecyl, n-heptadecyl, n-octadecyl, n-nonadecyl, n-eicosyl) or a linear unsaturated hydrocarbon group having 10 to 22 carbon atoms (e.g., cis-9-tetradecen-1-yl, cis-8- monounsaturated hydrocarbon groups such as pentadecen-1-yl, cis-9-hexadecen-1-yl, cis-8-heptadecen-1-yl, cis-9-octadecen-1-yl, cis-8-nonadecen-1-yl, cis-11-octadecen-1-yl, cis-9-eicosen-1-yl, cis-11-eicosen-1-yl, cis-12-heneicosen-1-yl, and cis-13-docosen-1-yl; diunsaturated hydrocarbon groups such as cis-11-heptadesdien-1-yl, cis-9-cis-12-octadesdien-1-yl, and cis-8-cis-11-cis-14-heptadestrien-1-yl, cis-9-cis-12-cis-15-octadestrien-1-yl, cis-8-cis-10-cis-12-heptadestrien-1-yl, cis-9-cis-11-cis-13-octadestrien-1-yl and tetraunsaturated hydrocarbon groups such as cis-3-cis-7-cis-11-cis-14-heptadestetraen-1-yl, cis-4-cis-8-cis-12-cis-15-octadestetraen-1-yl, cis-4-cis-7-cis-10-cis-13-nonadestetraen-1-yl, and cis-5-cis-8-cis-11-cis-14-eicosatetraen-1-yl. R 11 and R 12 is preferably a linear unsaturated hydrocarbon group having 16 to 24 carbon atoms, more preferably a linear unsaturated hydrocarbon group having 18 to 22 carbon atoms, and even more preferably R 11 is cis-8-heptadecen-1-yl, cis-8-cis-11-heptadesdien-1-yl, cis-12-heneicosen-1-yl, and R 12is cis-9-octadecen-1-yl, cis-9-cis-12-octadesdien-1-yl, cis-13-docosen-1-yl, and most preferably R 11 is cis-8-heptadecen-1-yl, and R 12 is cis-9-octadecen-1-yl.
[0019] In this embodiment, R in formula (I) 2 is the side chain of any one amino acid or a derivative of such an amino acid. Amino acids include the 20 naturally occurring amino acids (Gly, Ara, Leu, Ile, Val, Arg, Lys, Glu, Gln, Asp, Asn, Cys, Met, His, Pro, Phe, Tyr, Thr, Ser, and Trp), as well as modified and unnatural amino acids (e.g., 2-aminoadipic acid, 3-aminoadipic acid, β-alanine, 2-aminobutyric acid, 4-aminobutyric acid, 5-aminovaleric acid, 6-aminocaproic acid, 2-aminoheptanoic acid, 2,3-diaminopropionic acid, N-ethylglycine, N-ethylasparagine, hydroxylysine, norvaline, norleucine, ornithine, 2-aminopimelic acid, 2-aminosuberic acid, homoserine, aminomalonic acid, homoarginine, glycocyamine, 2,4-diaminobutyric acid, and aminophenylalanine). Preferably, R 2 is a side chain of a hydrophilic amino acid or a side chain of a derivative of a hydrophilic amino acid. This allows for more effective delivery of a compound to be introduced, such as a nucleic acid, to a target cell or tissue in a living body. Examples of hydrophilic amino acids include, but are not limited to, serine, threonine, asparagine, glutamine, arginine, histidine, lysine, aspartic acid, and glutamic acid. 、2 -aminoadipic acid, 2-aminopimelic acid, 2-aminosuberic acid, homoserine, and aminomalonic acid. Also preferably, R 2 is a side chain of an amino acid selected from the group consisting of aspartic acid, glutamic acid, histidine, serine, and threonine, or a side chain of a derivative of said amino acid, and more preferably, R 2is a side chain of an amino acid selected from the group consisting of aspartic acid, glutamic acid, histidine, serine, and threonine. This enables more effective delivery of a compound to be introduced, such as a nucleic acid, to a target cell or tissue in a living body. Further, preferably, R 2 is a side chain of an amino acid selected from the group consisting of aspartic acid, glutamic acid, histidine and threonine, or a side chain of a derivative of said amino acid, and more preferably, R 2 are the side chains of aspartic acid, glutamic acid, histidine, and threonine. This allows for the effective delivery of transfection compounds such as nucleic acids into the cytoplasm while further reducing cytotoxicity. In addition, R 2 When is the side chain of a derivative of a hydrophilic amino acid, the derivative of the hydrophilic amino acid also preferably exhibits hydrophilicity, and can exhibit hydrophilicity by, for example, having a polar group or a functional group that can have a charge.
[0020] The side chain of an amino acid derivative is (i)-NHR 4 or -N(R 4 ) groups replaced by two —NH groups (wherein each R 4 is independently alkyl, cycloalkyl, heterocycloalkyl, aryl, alkylaryl, arylalkyl, or heteroaryl, which may be substituted or unsubstituted; (ii) -O-PO3H2, -OR 4 or -OCOR 4 -OH groups replaced with groups (wherein each R 4 is independently alkyl, cycloalkyl, heterocycloalkyl, aryl, alkylaryl, arylalkyl, or heteroaryl, which may be substituted or unsubstituted; (iii)-COOR 4 -COOH groups replaced with groups (wherein each R 4is independently alkyl, cycloalkyl, heterocycloalkyl, aryl, alkylaryl, arylalkyl, or heteroaryl, which may be substituted or unsubstituted; (iv)-CON(R 4 ) groups replaced by two —COOH groups (wherein each R 4 are independently H or alkyl, cycloalkyl, heterocycloalkyl, aryl, alkylaryl, arylalkyl, or heteroaryl, which may be substituted or unsubstituted; (v) -SH group replaced by -SS-CH2-CH(NH2)-COOH or -SS-CH2-CH2-CH(NH2)-COOH; (vi)-CH(NH2)-, -CH(OH)-, -CHR 4 -CH- groups replaced with - groups (wherein each R 4 are independently H or alkyl, cycloalkyl, heterocycloalkyl, aryl, alkylaryl, arylalkyl, or heteroaryl, which may be substituted or unsubstituted; (vii)-CH2-NH2, -CH2-OH, -CH2R 4 a —CH group replaced by a —CH group (wherein each R 4 is independently alkyl, cycloalkyl, heterocycloalkyl, aryl, alkylaryl, arylalkyl, or heteroaryl, which may be substituted or unsubstituted), and / or (viii) H attached to a carbon atom replaced by a halogen; Examples include those having the following structure. Also, the above R 4 is preferably alkyl, more preferably alkyl having 1 to 6 carbon atoms, even more preferably alkyl having 1 to 3 carbon atoms, and even more preferably alkyl having 1 carbon atom.
[0021] In the present specification, the term "amino acid" includes L-, D- and racemic forms, with the L-form being preferred.
[0022] In addition, R 2 is a side chain of a derivative of an amino acid selected from the group consisting of aspartic acid, glutamic acid, histidine, methionine, serine, and threonine, examples of the side chain of a derivative of aspartic acid, glutamic acid, histidine, methionine, serine, and threonine include the following: That is, R 2 When is aspartic acid or glutamic acid, the side chain of the derivative is (iii) -COOR 4 (vi) -COOH group replaced by -CH(NH2)-, -CH(OH)-, -CHR 4 and / or (viii) an H bonded to a carbon atom replaced with a halogen. In the case of histidine or methionine, the side chain of the derivative is (vi) -CH(NH2)-, -CH(OH)-, -CHR 4 and / or (viii) an H bonded to a carbon atom replaced with a halogen. Furthermore, R 2 When is serine, the side chain of the derivative is (ii) -O-PO3H2, -OR 4 or -OCOR 4 (vi) -OH groups replaced by -CH(NH2)-, -CH(OH)-, -CHR 4 and / or (viii) an H bonded to a carbon atom replaced with a halogen. Also, R 2 When is threonine, the side chain of the derivative is (ii) -O-PO3H2, -OR 4 or -OCOR 4 (vii) -OH groups replaced by -CH2-NH2, -CH2-OH, -CH2R groups 4 and / or (viii) an H bonded to a carbon atom replaced with a halogen. The side chain of the derivative of any of the above amino acids is preferably (vi) -CH(NH2)-, -CH(OH)-, -CHR 4 (vii) -CH- groups replaced with - groups (in the case of threonine, -CH-NH, -CH-OH, -CHR 4 group), and more preferably, -CHR 4 - groups (in the case of threonine, -CHR 4 group). Also, the above R 4 may be H or alkyl, cycloalkyl, heterocycloalkyl, aryl, alkylaryl, arylalkyl, or heteroaryl, which may be substituted or unsubstituted. 4 When there are a plurality of R in a molecule, they are independently selected from the above. 4 is preferably alkyl, more preferably alkyl having 1 to 6 carbon atoms, even more preferably alkyl having 1 to 3 carbon atoms, and even more preferably alkyl having 1 carbon atom.
[0023] In this embodiment, R in formula (I) 3 is the side chain of a basic amino acid or the side chain of a derivative of the basic amino acid, and preferably R 3 is the side chain of a basic amino acid. More preferably, R 3 is a side chain of an amino acid selected from the group consisting of lysine, histidine, and arginine, or a side chain of a derivative of the amino acid, and more preferably, R 3 is the side chain of an amino acid selected from the group consisting of lysine, histidine, and arginine. 3 is the side chain of arginine or the side chain of a derivative of arginine, and more preferably R 3 is the side chain of arginine. In this way, a compound to be introduced, such as a nucleic acid, can be effectively delivered into the cytoplasm.
[0024] Basic amino acids include natural amino acids and modified and unnatural amino acids that have a basic residue. Specific examples include, but are not limited to, lysine, histidine, arginine, homoarginine, glycocyamine, ornithine, 2,4-diaminobutyric acid, 2,3-diaminopropionic acid, and aminophenylalanine.
[0025] R 3 When R is a side chain of a derivative of a basic amino acid, the side chain may be a side chain having any of (i) to (viii) listed above as the side chain of a derivative of an amino acid. 4 is preferably alkyl, more preferably alkyl having 1 to 6 carbon atoms, even more preferably alkyl having 1 to 3 carbon atoms, and even more preferably alkyl having 1 carbon atom. In addition, R 3 When the side chain is a derivative of a basic amino acid, the derivative of the basic amino acid also preferably exhibits basicity, and can exhibit basicity by having, for example, an amino group or a functional group capable of accepting a proton.
[0026] Furthermore, R 3 When is a side chain of a derivative of an amino acid selected from the group consisting of lysine, histidine, and arginine, examples of the side chain of a derivative of lysine, histidine, or arginine include the following. That is, R 3 When is lysine, the side chain of the derivative is (i) -NHR 4 or -N(R 4 (vi) an —NH group replaced by a —CH(NH)—, —CH(OH)—, —CHR 4 Illustrative examples include those having a -CH2- group replaced with a - group. Also, R 3 When is histidine, the side chain of the derivative is (vi) -CH(NH2)-, -CH(OH)-, -CHR 4 Illustrative examples include those having a -CH2- group replaced with a - group. Furthermore, R 3 When is arginine, the side chain of the derivative is (vi) -CH(NH2)-, -CH(OH)-, -CHR 4 Illustrative examples include those having a -CH2- group replaced with a - group. The side chain of the derivative of any of the above amino acids is preferably (vi) -CH(NH2)-, -CH(OH)-, -CHR 4 Preferably, it has a —CH— group replaced with a —CHR 4 - groups have -CH2- groups replaced with - groups. Also, the above R 4 may be H or alkyl, cycloalkyl, heterocycloalkyl, aryl, alkylaryl, arylalkyl, or heteroaryl, which may be substituted or unsubstituted. 4 When there are a plurality of R in a molecule, they are independently selected from the above. 4 is preferably alkyl, more preferably alkyl having 1 to 6 carbon atoms, even more preferably alkyl having 1 to 3 carbon atoms, and even more preferably alkyl having 1 carbon atom.
[0027] In this embodiment, R in formula (I) 2 is a side chain of an amino acid selected from the group consisting of aspartic acid, glutamic acid, histidine, serine, and threonine, or a side chain of a derivative of such an amino acid, and R 3 is preferably a side chain of an amino acid selected from the group consisting of lysine, histidine, and arginine, or a side chain of a derivative of such an amino acid, and more preferably, R 2 is the side chain of an amino acid selected from the group consisting of aspartic acid, glutamic acid, histidine, serine, and threonine, and R 3 is the side chain of an amino acid selected from the group consisting of lysine, histidine, and arginine. In addition, R in formula (I) 2is a side chain of an amino acid selected from the group consisting of aspartic acid, glutamic acid, histidine, and threonine, or a side chain of a derivative of such an amino acid, and R 3 is preferably the side chain of arginine or the side chain of an arginine derivative, and more preferably R 2 is the side chain of an amino acid selected from the group consisting of aspartic acid, glutamic acid, histidine, and threonine, and R 3 is the side chain of arginine.
[0028] Specific examples of the lipid represented by the above formula (I) include, but are not limited to, lipids represented by the following formulas (1a) to (1l): Of the lipids represented by the following formulas (1a) to (1l), formulas (1a), (1b), (1e), and (1l) are more preferred. [ka] [ka] [ka] [ka] [ka] [ka] [ka] [ka] [ka] [ka] [ka] [ka]
[0029] [Method of producing lipids] The compound represented by formula (I) can be produced, for example, as follows, although the compound is not particularly limited thereto. First, the lipophilic region (R 1 -O-) corresponding to the aliphatic alcohol (R 1 -OH) and the first amino acid moiety (-O-CO-CR 2 -NH- corresponding amino acid (HO2C-CR 2 -NH2) or a derivative of the amino acid (the amino acid and the derivative of the amino acid are also referred to as the first amino acid) and a second second amino acid moiety (-NH-CO-CR 3 An amino acid or an amino acid derivative corresponding to the amino acid (-NH2) (the amino acid or the amino acid derivative is also referred to as a second amino acid) is prepared.
[0030] Subsequently, the hydroxy group of the aliphatic alcohol is esterified with the carboxy group of the first amino acid, and then the amino group of the esterified product is amidated with the carboxy group of the second amino acid, thereby obtaining the lipid of this embodiment. In carrying out the esterification reaction or amidation reaction, the functional groups of the first amino acid and the second amino acid can be protected in advance with a protecting group so that each compound reacts with the desired functional group. Alternatively, the first and second amino acids may be amidated, and then the amidated product may be esterified with an aliphatic alcohol.
[0031] In addition, aliphatic alcohols (R 1 The fatty acid (R —OH) can be obtained by reducing a desired fatty acid or aliphatic ketone. 1 -OH)R 1is represented by the following formula (II) (i.e., in the case of a secondary alcohol), an aliphatic alcohol (R 1 -OH) can be obtained. [ka]
[0032] First, R 11 A fatty acid having a carboxyl group at the 1st position of the hydrocarbon group (R at the carbonyl carbon of formic acid) 11 (fatty acids with R 12 An aliphatic alcohol having a hydroxy group at the 1-position of the hydrocarbon group (R 12 and fatty acids having a carboxy group at the 1-position of the hydrocarbon group, such as R 11 Alternatively, an aliphatic alcohol having a hydroxy group at the 1-position of the hydrocarbon group may be prepared, but the former case will be described here. Next, the R 12 The organometallic reagent is obtained from an aliphatic alcohol having a hydroxy group at the 1-position of R by, for example, halogenating the hydroxy group. 11 By reacting a fatty acid having a carboxy group at the 1-position of R with the organometallic reagent, 1 can obtain the aliphatic alcohol represented by formula (II).
[0033] Here, a specific method for producing the lipid of this embodiment will be explained below using the lipid of the above formula (Ia) (aspartic acid as the first amino acid and arginine as the second amino acid moiety). In the following example, before aspartic acid is esterified with an aliphatic alcohol, protecting groups (t-Bu group and Fmoc group, respectively) are added to the carboxyl group and amino group of aspartic acid, and then aliphatic alcohol (a) and aspartic acid (b) are esterified. [ka]
[0034] Next, as shown below, the protecting group (-Fmoc) added to the amino group of the esterified product (c) obtained in the above process is removed, and the amino group of the removed esterified product (d) is amidated with the carboxyl group of arginine (e). In this example, protecting groups (Fmoc and Pbf groups, respectively) are added to the amino and guanidino groups of arginine before amidation of arginine. [ka]
[0035] The amidated product (f) obtained as described above has a protecting group in this example, and the lipid of formula (Ia) can be obtained by removing the protecting group. [ka]
[0036] [Introduced compound] Here, the lipid of this embodiment can be used for intracellular introduction to introduce a predetermined introduction compound into cells. Specific introduction compounds include nucleic acids, peptides, proteins, etc. The introduction compound can be a biologically active substance that, when delivered to a cell or organ and introduced into the cell, brings about a desired change in the cell, organ, or other body tissue or system, and can be useful for the treatment or prevention of infectious diseases, diseases, disorders, pathologies, etc. The introduced compound may also be a cytotoxin, a radioactive ion, a chemotherapeutic agent, a vaccine, or a compound that induces an immune response (therapeutic and / or prophylactic agent). Vaccines include compounds and formulations that can provide immunity against one or more conditions associated with infectious diseases such as influenza, measles, human papillomavirus (HPV), rabies, meningitis, whooping cough, tetanus, plague, hepatitis, tuberculosis, and coronavirus. Vaccines may also include nucleic acids, specifically mRNA, encoding antigens and / or epitopes derived from the above infectious diseases. Vaccines also include compounds and formulations that induce an immune response against tumor cells, such as cancer cells, and may include nucleic acids, specifically mRNA, encoding antigens, epitopes, and / or neoepitopes derived from tumor cells. Compounds that induce an immune response include, but are not limited to, vaccines, corticosteroids (e.g., dexamethasone), and other species.
[0037] In this embodiment, the nucleic acid may be any molecule formed by polymerizing nucleotides and / or molecules functionally equivalent to the nucleotides. Examples include RNA, which is a polymer of ribonucleotides; DNA, which is a polymer of deoxyribonucleotides; chimeric nucleic acids consisting of RNA and DNA; and nucleotide polymers in which at least one nucleotide of these nucleic acids is replaced with a molecule functionally equivalent to the nucleotide. Nucleic acids in this embodiment also include derivatives containing at least one molecule formed by polymerizing nucleotides and / or molecules functionally equivalent to the nucleotides. Other examples include peptide nucleic acids (PNA) [Acc. Chem. Res., 32, 624 (1999)], oxypeptide nucleic acid (OPNA) [J. Am. Chem. Soc., 123, 4653 (2001)], and peptide ribonucleic acid (PRNA) [J. Am. Chem. Soc., 122, 6900 (2000)]. In this embodiment, uridine U in RNA and thymine T in DNA can be interchangeable. Examples of molecules having functions equivalent to those of nucleotides include nucleotide derivatives.
[0038] In this embodiment, nucleic acids include ribonucleic acid (RNA), including messenger RNA (mRNA), which may encode a polypeptide of interest, including any naturally occurring or non-naturally occurring or otherwise modified polypeptide. The polypeptide encoded by the mRNA may be of any size and may have any secondary structure or activity. In some embodiments, the polypeptide encoded by the mRNA may exert a therapeutic effect when expressed in a cell.
[0039] In this embodiment, the nucleic acid preferably includes a nucleic acid that suppresses the expression of a target gene, and more preferably includes a nucleic acid that has the effect of suppressing the expression of a target gene by utilizing RNA interference (RNAi).
[0040] In this embodiment, the target gene is not particularly limited as long as it is a gene that produces and expresses mRNA. For example, genes related to tumors or inflammation are preferred, such as vascular endothelial growth factor (hereinafter abbreviated as VEGF), vascular endothelial growth factor receptor (hereinafter abbreviated as VEGFR), fibroblast growth factor, fibroblast growth factor receptor, platelet-derived growth factor, platelet-derived growth factor receptor, hepatocyte growth factor, hepatocyte growth factor receptor, Kruppel-like factor, Examples of such genes include genes encoding proteins such as VEGF gene, VEGFR gene, fibroblast growth factor gene, fibroblast growth factor receptor gene, platelet-derived growth factor gene, platelet-derived growth factor receptor gene, hepatocyte growth factor gene, hepatocyte growth factor receptor gene, KLF gene, Ets transcription factor gene, nuclear factor gene, hypoxia-inducible factor gene, cell cycle-related factor gene, chromosome replication-related factor gene, chromosome repair-related factor gene, microtubule-associated factor gene (e.g., CKAP5 gene, etc.), growth signal pathway-related factor gene (e.g., KRAS gene, etc.), growth-related transcription factor gene, and apoptosis-related factor (e.g., BCL-2 gene, etc.).
[0041] Furthermore, in this embodiment, the target gene is preferably a gene expressed in the liver, lung, kidney, or spleen, and examples thereof include genes encoding proteins such as the above-mentioned tumor- or inflammation-related genes, hepatitis B virus genome, hepatitis C virus genome, apolipoprotein (APO), hydroxymethylglutaryl (HMG) CoA reductase, kexin type 9 serine protease (PCSK9), factor XII, glucagon receptor, glucocorticoid receptor, leukotriene receptor, thromboxane A2 receptor, histamine H1 receptor, carbonic anhydrase, angiotensin-converting enzyme, renin, p53, tyrosine phosphatase (PTP), sodium-dependent glucose transporter, tumor necrosis factor, and interleukin.
[0042] As the nucleic acid that suppresses the expression of a target gene, any nucleic acid may be used, as long as it contains a base sequence complementary to a portion of the base sequence of the mRNA of a gene (target gene) that encodes a protein or the like and suppresses the expression of the target gene, for example, double-stranded nucleic acids such as siRNA (small interfering RNA) and miRNA (micro RNA), and single-stranded nucleic acids such as shRNA (short hairpin RNA), antisense nucleic acid, and ribozyme, but double-stranded nucleic acids are preferably used. A nucleic acid containing a base sequence complementary to a portion of the base sequence of the mRNA of a target gene is called an antisense strand nucleic acid, and a nucleic acid containing a base sequence complementary to the base sequence of the antisense strand nucleic acid is also called a sense strand nucleic acid. The sense strand nucleic acid refers to a nucleic acid that pairs with the antisense strand nucleic acid to form a duplex, such as a nucleic acid consisting of a portion of the base sequence of a target gene. A double-stranded nucleic acid is a nucleic acid in which two strands are paired to form a double-stranded portion. The double-stranded portion refers to a portion in which the nucleotides or derivatives thereof that constitute the double-stranded nucleic acid form base pairs to form a double strand. The base pairs that constitute the double-stranded portion are usually 15 to 27 base pairs, preferably 15 to 25 base pairs, more preferably 15 to 23 base pairs, even more preferably 15 to 21 base pairs, and particularly preferably 15 to 19 base pairs.
[0043] The antisense strand nucleic acid of the double-stranded nucleic acid is preferably a nucleic acid containing a base sequence complementary to a partial sequence of the mRNA of a target gene, or a nucleic acid in which 1 to 3 bases, preferably 1 to 2 bases, and more preferably 1 base, have been substituted, deleted, or added to the nucleic acid, and which has activity of inhibiting the expression of a target protein. The length of the single strand constituting the double-stranded nucleic acid is usually 15 to 30 bases, preferably 15 to 29 bases, more preferably 15 to 27 bases, even more preferably 15 to 25 bases, particularly preferably 17 to 23 bases, and most preferably 19 to 21 bases. Either or both of the antisense and sense strands constituting the double-stranded nucleic acid may have an additional nucleic acid on the 3' or 5' side following the duplex-forming portion that does not form a duplex. This non-duplex-forming portion is also called an overhang. As the double-stranded nucleic acid having an overhang, one having an overhang consisting of 1 to 4 bases, usually 1 to 3 bases, at the 3'-end or 5'-end of at least one strand is used, but one having an overhang consisting of 2 bases is preferably used, and one having an overhang consisting of dTdT or UU is more preferably used. The overhang can be present in only the antisense strand, only the sense strand, or both the antisense and sense strands, but double-stranded nucleic acid having overhangs in both the antisense and sense strands is preferably used. Alternatively, a sequence following the double-strand-forming portion that partially or completely matches the mRNA of the target gene, or a sequence following the double-strand-forming portion that matches the base sequence of the complementary strand of the mRNA of the target gene, may be used. Furthermore, examples of nucleic acids that suppress the expression of a target gene include nucleic acid molecules that generate the double-stranded nucleic acid by the action of ribonuclease such as Dicer (WO 2005 / 089287), and double-stranded nucleic acids that do not have overhangs at the 3' or 5' ends.
[0044] Furthermore, when the double-stranded nucleic acid is an siRNA, the sequence of at least the 1st to 17th bases from the 5' end to the 3' end of the antisense strand is a sequence of bases complementary to a sequence of 17 consecutive bases in the mRNA of the target gene; preferably, the sequence of the 1st to 19th bases from the 5' end to the 3' end of the antisense strand is a sequence of bases complementary to a sequence of 19 consecutive bases in the mRNA of the target gene, or the sequence of the 1st to 21st bases is a sequence of bases complementary to a sequence of 21 consecutive bases in the mRNA of the target gene, or the sequence of the 1st to 25th bases is a sequence of bases complementary to a sequence of 25 consecutive bases in the mRNA of the target gene.
[0045] Furthermore, in this embodiment, when the nucleic acid is siRNA, preferably 10 to 70%, more preferably 15 to 60%, and even more preferably 20 to 50% of the sugars in the nucleic acid are riboses substituted with a modification group at the 2' position. In this embodiment, "substituted with a modification group at the 2' position of ribose" means that the hydroxyl group at the 2' position has been substituted with a modification group, and the configuration may be the same as or different from that of the hydroxyl group at the 2' position of ribose, but preferably the configuration is the same as that of the hydroxyl group at the 2' position of ribose. Riboses substituted with a modification group at the 2' position are included in 2'-modified nucleotides in sugar-modified nucleotides, and the modification group of a ribose substituted with a modification group at the 2' position has the same meaning as the modification group in a 2'-modified nucleotide.
[0046] In this embodiment, the nucleic acid includes derivatives in which oxygen atoms contained in phosphate moieties, ester moieties, etc. in the nucleic acid structure are substituted with other atoms such as sulfur atoms.
[0047] Furthermore, the 5'-hydroxyl group of the sugar bound to the base at the 5' end of the antisense strand and the sense strand may be modified with a phosphate group or the above-mentioned modifying group, or a group that can be converted to a phosphate group or the above-mentioned modifying group by a nuclease or the like in vivo. Furthermore, the 3'-hydroxyl group of the sugar bound to the base at the 3' end of the antisense strand and the sense strand may be modified with a phosphate group or the above-mentioned modifying group, or a group that can be converted to a phosphate group or the above-mentioned modifying group by a nuclease or the like in vivo.
[0048] The single-stranded nucleic acid may be any nucleic acid consisting of a complementary sequence to a sequence consisting of 15 to 27 consecutive bases, preferably 15 to 25 bases, more preferably 15 to 23 bases, even more preferably 15 to 21 bases, and particularly preferably 15 to 19 bases, of a target gene, or a nucleic acid in which 1 to 3 bases, preferably 1 to 2 bases, and more preferably 1 base, have been substituted, deleted, or added, and which has activity of inhibiting the expression of a target protein. The single-stranded nucleic acid preferably has a length of 15 to 30 bases or less, preferably 15 to 29 bases, more preferably 15 to 27 bases, even more preferably 15 to 25 bases, and particularly preferably 15 to 23 bases. The single-stranded nucleic acid may be one in which the antisense strand and sense strand constituting the double-stranded nucleic acid are linked via a spacer sequence (spacer oligonucleotide). The spacer oligonucleotide is preferably a single-stranded nucleic acid molecule of 6 to 12 bases, and the sequence at its 5' end is preferably two U's. An example of a spacer oligonucleotide is a nucleic acid having the sequence UUCAAGAGA. The order of the antisense strand and the sense strand connected by the spacer oligonucleotide may be either on the 5' end. The single-stranded nucleic acid is preferably a single-stranded nucleic acid such as shRNA that has a duplex-forming portion formed by a stem-loop structure. Single-stranded nucleic acids such as shRNA are typically 50 to 70 bases long. Nucleic acids having a length of 70 bases or less, preferably 50 bases or less, more preferably 30 bases or less, which are designed to generate the above single-stranded or double-stranded nucleic acids by the action of ribonuclease or the like, may also be used.
[0049] The nucleic acids used in this embodiment may be produced using known RNA or DNA synthesis methods and RNA or DNA modification methods.
[0050] [Composition] Next, the composition according to this embodiment will be described. The composition of this embodiment contains the lipid represented by the above formula (I) and the above-mentioned introduction compound, and more specifically, can include lipid nanoparticles formed by the aggregation of multiple lipids represented by formula (I) and containing the introduction compound inside.
[0051] The composition of this embodiment may contain a combination of two or more types of lipids represented by formula (I), or may further contain molecules other than the lipids represented by formula (I), such as amphipathic molecules (e.g., phospholipids derived from biological membranes, such as phosphatidylinositol, phosphatidylserine, phosphatidylethanolamine, and phosphatidylcholine), cationic lipid molecules, surfactants (e.g., CHAPS, sodium cholate, octylglucoside, and ND-gluco-N-methylalkanamides), polyethylene glycol-modified lipids, glycolipids, peptide lipids, proteins, and sterols, as long as the advantages of the present invention, such as the efficiency of intracellular introduction of the compound to be introduced and low cytotoxicity, are not impaired.
[0052] The polyethylene glycol-modified lipids include PEG2000-DMG (PEG2000-dimyristylglycerol), PEG2000-DPG (PEG2000-dipalmitoylglycerol), PEG2000-DSG (PEG2000-distearoylglycerol), PEG5000-DMG (PEG5000-dimyristylglycerol), PEG5000-DPG (PEG5000-dipalmitoylglycerol), and PEG5000-DSG (PEG5000-distearoylglycerol). Examples of polyethylene glycol-modified lipids include PEG-cDMA (N-[(methoxypoly(ethylene glycol)2000)carbamyl]-1,2-dimyristyloxylpropyl-3-amine), PEG-C-DOMG (R-3-[(ω-methoxy-poly(ethylene glycol)2000)carbamoyl]-1,2-dimyristyloxylpropyl-3-amine), polyethylene glycol (PEG)-diacylglycerol (DAG), PEG-dialkyloxypropyl (DAA), PEG-phospholipid, and PEG-ceramide (Cer). One polyethylene glycol-modified lipid can be used alone, or two or more can be used in combination. Examples of sterols include cholesterol, dihydrocholesterol, lanosterol, β-sitosterol, campesterol, stigmasterol, brassicasterol, ergocastol, fucosterol, 3β-[N-(N',N'-dimethylaminoethyl)carbamoyl]cholesterol (DC-Chol), etc. Sterols can be used singly or in combination of two or more.
[0053] In this embodiment, lipid nanoparticles can be formed by assembling and organizing lipids represented by the above formula (I). Here, "organization" refers to the assembly of constituent molecules, including lipids represented by the above formula (I) and optionally contained molecules other than the lipids represented by formula (I), via non-covalent bonds such as hydrophobic bonds. Organized assemblies include bilayers formed by hydrophobic bonds between the hydrophobic portions of the constituent molecules, liposomes, multivesicles, string-like assemblies, disk-like assemblies, lamellar assemblies, rod-like assemblies, and mixtures thereof. Lipid nanoparticles can be obtained by incorporating an introduced compound into the interior during the organization process.
[0054] In addition to the above-mentioned components, the composition of the present embodiment may contain other additives such as sugars such as sucrose, glucose, sorbitol, and lactose; amino acids such as glutamine, glutamic acid, sodium glutamate, and histidine; and salts of acids such as citric acid, phosphoric acid, acetic acid, lactic acid, carbonic acid, and tartaric acid.
[0055] The composition of the present embodiment may be formulated as a pharmaceutical composition, for example, in the form of an injection.
[0056] The composition of the present embodiment may be in a powder state in which the solvent has been removed by, for example, freeze-drying or the like, or may be in a liquid state. When the composition is in a powder state, it can be used as an injection by suspending or dissolving it in a pharmaceutically acceptable medium before use. When the composition is in a liquid state, it can be used as an injection as is or by suspending or dissolving it in a pharmaceutically acceptable medium.
[0057] Examples of pharmaceutically acceptable vehicles include sterilized water, physiological saline, and isotonic solutions containing adjuvants such as glucose, D-sorbitol, D-mannose, D-mannitol, sodium chloride, etc. The composition of this embodiment may further contain additives such as solubilizers (e.g., alcohols such as ethanol, propylene glycol, and polyethylene glycol), stabilizers, antioxidants, and preservatives.
[0058] The particle size of the lipid nanoparticles of the composition of this embodiment can be calculated as an average particle size, and the particle size (average particle size) of the lipid nanoparticles is preferably 250 nm or less, more preferably 200 nm or less, even more preferably 150 nm or less, even more preferably 130 nm or less, and most preferably 120 nm or less. The particle size (average particle size) of the lipid nanoparticles is preferably 10 nm or more, more preferably 30 nm or more. Furthermore, the polydispersity index (PDI) of the lipid nanoparticles is preferably 0.4 or less, more preferably 0.3 or less, and even more preferably 0.2 or less. When the particle size and / or polydispersity index is within the above range, it becomes easier for the particles to reach the target cell or tissue in the body. The average particle size and polydispersity index can be measured by the method described in the Examples section.
[0059] From the viewpoint of suppressing non-specific adsorption and immune reactions, the composition of the embodiment preferably has a low charge when measured in Tris-HCl at pH 7.4, for example. The charge of the composition measured in Tris-HCl at pH 7.4 can be measured as described in the Examples section.
[0060] The lipid nanoparticles of the composition of this embodiment can be formed by any known method without any particular limitation. The method for producing the composition includes, for example, the steps of preparing an aqueous solution such as a citrate buffer solution containing the compound to be introduced and a polar organic solvent-containing solution containing at least the lipid of this embodiment, mixing the aqueous solution with the polar organic solvent-containing solution to obtain a mixed solution, and removing the polar organic solvent from the mixed solution. According to this method for producing the composition, a composition containing lipid nanoparticles in which the compound to be introduced is efficiently encapsulated can be obtained.
[0061] The polar organic solvent-containing solution may further contain molecules other than the lipids of this embodiment, such as amphipathic molecules (e.g., phospholipids derived from biological membranes, such as phosphatidylinositol, phosphatidylserine, phosphatidylethanolamine, and phosphatidylcholine), cationic lipid molecules, surfactants (e.g., CHAPS, sodium cholate, octylglucoside, and ND-gluco-N-methylalkanamides), polyethylene glycol-modified lipids, glycolipids, peptide lipids, proteins, and sterols such as cholesterol. Furthermore, the polar organic solvent of the polar organic solvent-containing solution is not particularly limited, but examples thereof include alcohols such as ethanol and t-butanol, from the viewpoint of the polarity of the solvent and the ease of removing the solvent after the formation of lipid nanoparticles.
[0062] The step of obtaining the mixture can be performed using, for example, a vortex mixer or a microchannel. Furthermore, by the step of obtaining the mixture, lipid nanoparticles having the compound to be introduced encapsulated therein can be formed in the mixture. In the step of removing the polar organic solvent, the content of the polar organic solvent can be reduced by, for example, diafiltration, ultrafiltration, or evaporation under reduced pressure.
[0063] An incubation step can be carried out between the step of obtaining the mixed solution and the step of reducing the content of the polar organic solvent.
[0064] In this embodiment, for example, the composition of this embodiment can be administered intravenously to a mammal, including a human, to deliver it to an organ or site suffering from, for example, cancer or inflammation, and introduce a compound to be introduced, such as a nucleic acid, in the composition of this embodiment into cells in the target organ or site. Organs or sites suffering from cancer or inflammation include, but are not limited to, the stomach, large intestine, liver, lungs, spleen, pancreas, kidneys, bladder, skin, blood vessels, and eyeballs. Furthermore, the composition of this embodiment can be administered intravenously to a mammal, including a human, to deliver it to, for example, blood vessels, liver, lungs, spleen, and / or kidneys, and introduce a compound to be introduced, such as a nucleic acid, in the composition of this embodiment into cells in the target organ or site. Liver, lung, spleen, and / or kidney cells may be normal cells, cells associated with cancer or inflammation, or cells associated with other diseases. If the compound to be introduced in the composition of this embodiment is a nucleic acid, and the nucleic acid has the effect of inhibiting the expression of a target gene using RNA interference (RNAi), the nucleic acid that inhibits the expression of a gene can be introduced into mammalian cells, thereby inhibiting the expression of the gene, etc. The subject of administration is preferably a human. Furthermore, if the target gene in the composition of this embodiment is, for example, a gene associated with tumors or inflammation, the composition of this embodiment can be used as a therapeutic or preventive agent for cancer or inflammatory diseases, preferably a therapeutic or preventive agent for solid cancer or inflammation in or near blood vessels. Specifically, if the target gene in the composition of this embodiment is a gene associated with angiogenesis, the composition can inhibit the proliferation of vascular smooth muscle, angiogenesis, etc., and therefore can be used as a therapeutic or preventive agent for cancer or inflammatory diseases accompanied by the proliferation of vascular smooth muscle or angiogenesis. That is, this embodiment also provides a method for treating cancer or inflammatory disease, which comprises administering the composition of this embodiment described above to a mammal. The subject of administration is preferably a human, and more preferably a human suffering from cancer or inflammatory disease.
[0065] The composition of this embodiment can also be used as a formulation for the purposes of stabilizing the nucleic acid in biological components such as blood components (e.g., blood, digestive tract, etc.), reducing side effects, or increasing drug accumulation in tissues or organs containing the expression site of a target gene.
[0066] Furthermore, if the compound to be introduced in the composition of this embodiment is a nucleic acid and the nucleic acid is mRNA encoding an antigen derived from an infectious disease or tumor cell, it can be directed to induce a specific immune response, and therefore can be applied to developing a wide range of therapeutic and preventive mRNA vaccines for a wide variety of diseases, including infectious diseases and tumors.
[0067] The route of administration of the composition of this embodiment is preferably the most effective route for treatment, and examples thereof include parenteral administration such as oral, respiratory, rectal, subcutaneous, intradermal, intramuscular, or intravenous administration, or oral administration, with intravenous or intramuscular administration being preferred. Furthermore, when the composition of this embodiment is used as an mRNA vaccine, intramuscular administration is preferred. The dosage of the composition varies depending on the subject, target organ, symptoms, and administration method.
[0068] Although the embodiments of the present invention have been described above, the lipids and compositions of the present invention are not limited to the above examples, and the lipids and compositions of the present invention can be modified as appropriate. [Example]
[0069] The present invention will be described in more detail below by way of examples, which are intended to illustrate the present invention and should not be construed as limiting. The structures of the final products, intermediates, and starting materials are confirmed by standard analytical methods, such as MS or NMR. The abbreviations used in the following examples are conventional abbreviations well known to those skilled in the art. Some abbreviations are listed below. DCC: dicyclohexylcarbodiimide DMAP: N,N-dimethyl-4-aminopyridine TEA: Triethylamine THF: tetrahydrofuran TFA: Trifluoroacetic acid MsCl: methanesulfonyl chloride
[0070] 1 H NMR spectra were recorded on a JEOL JNM-ECZ400S 400 MHz spectrometer. All chemical shifts are reported in parts per million (δ) relative to chloroform. The following abbreviations are used to denote signal patterns: S = singlet, d = doublet, t = triplet, q = quartet, quin = quintet, M = multiplet, and br = broad. MS data were measured in ESI+ ion mode using a high-performance liquid chromatography tandem mass spectrometer (instrument name: UPLC-MS / MS system ACQUITY TQD; manufactured by Nihon Waters Co., Ltd.) under the following measurement conditions: capillary voltage 4.0 kV, cone voltage 30 V, source temperature 100°C, and desolvation gas temperature 250°C.
[0071] <Lipid synthesis> The lipids of the following examples and comparative examples were synthesized. [Example 1] Synthesis of 3-(2-amino-5-guanidinopentanamide)-4-(((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)oxy)-4-oxobutanoic acid (hereinafter also referred to as lipid (Ia)) Lipid (Ia) has a lipophilic region that is a hydrocarbon group with 36 carbon atoms, and a hydrophilic region that is a dipeptide derived from Asp (the first amino acid) and Arg (the second amino acid). The synthesis method of lipid (Ia) is described below.
[0072] Step (a1): Synthesis of N-methoxy-N-methylolamide [ka] Oleic acid (42.4 g, 150 mmol), DMAP (2.75 g, 22.5 mmol), and N,O-dimethylhydroxylamine hydrochloride (21.9 g, 225 mmol) were dissolved in dichloromethane (150 mL). After stirring at room temperature until the next day, the mixture was quenched with water, and the precipitated dicyclohexylurea was removed by filtration. The filtrate was concentrated, and the residue was dissolved in ethyl acetate. The organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate water, and ion-exchanged water, and then concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to quantitatively obtain the desired N-methoxy-N-methylolamide.
[0073] Step (a2): Synthesis of (Z)-octadec-9-en-1-yl methanesulfonic acid [ka] Oleyl alcohol (100.0 g, 372.45 mmol) and TEA (113.07 g, 1.117 mmol) were dissolved in THF (900 mL) and cooled to 0 °C. To this solution, MsCl (63.9 g, 558.7 mmol) was added. After the addition, the mixture was warmed to room temperature and allowed to react at room temperature for 2 hours. After the reaction was completed, dichloromethane and triethylamine were concentrated under reduced pressure. The resulting residue was dissolved in ethyl acetate. The organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate solution, and ion-exchanged water, and then concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to quantitatively obtain the desired (Z)-octadec-9-en-1-ylmethanesulfonic acid.
[0074] Step (a3): Synthesis of (Z)-1-bromooctadec-9-ene [ka] (Z)-Octadec-9-en-1-ylmethanesulfonic acid (135 g, 390 mmol) obtained in step (a2) above and lithium bromide (161 g, 1850 mmol) were dissolved in acetone (300 mL) and reacted under reflux for 1 hour. After completion of the reaction, the solvent was concentrated under reduced pressure, and the resulting residue was dissolved in ethyl acetate. The organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate water, and ion-exchanged water, and then the organic phase was concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (heptane), and the desired (Z)-1-bromooctadec-9-ene was obtained quantitatively.
[0075] Step (a4): Synthesis of (9Z,27Z)-hexatriaconta-9,27-dien-18-one [ka] A solution of (Z)-1-bromooctadec-9-ene (40.7 g, 123 mmol) obtained in step (a3) in diethyl ether (250 mL) was added dropwise to magnesium (3.73 g, 154 mmol) and diethyl ether (25 mL) with stirring. After the addition, the mixture was stirred for 1 hour, and then a solution of N-methoxy-N-methylolamide (20 g, 61.4 mmol) obtained in step (a1) in diethyl ether (125 mL) was added dropwise. The reaction was terminated when the disappearance of the raw materials was confirmed by thin-layer chromatography (TLC). After the reaction was terminated, the reaction system was quenched by adding water and extracted with ethyl acetate. The organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate solution, and ion-exchanged water, and then concentrated under reduced pressure. The obtained crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to quantitatively obtain the target (9Z,27Z)-hexatriaconta-9,27-dien-18-one.
[0076] Step (a5): Synthesis of (9Z,27Z)-hexatriaconta-9,27-dien-18-ol [ka] To a solution of (9Z,27Z)-hexatriaconta-9,27-dien-18-one (31.9 g, 61.7 mmol) obtained in step (a4) dissolved in THF (120 mL) and methanol (120 mL), sodium borohydride (11.7 g, 309 mmol) was added and reacted. After completion of the reaction, the solvent was concentrated under reduced pressure, the resulting residue was dissolved in ethyl acetate, and the organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate water, and ion-exchanged water, and then the organic phase was concentrated under reduced pressure. The obtained crude product was purified by silica gel column chromatography (ethyl acetate / heptane), and the desired (9Z,27Z)-hexatriaconta-9,27-dien-18-ol was obtained quantitatively.
[0077] Step (a6): Synthesis of 4-(tert-butyl) 1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)(((9H-fluoren-9-yl)methoxy)carbonyl)aspartate [ka] (9Z,27Z)-hexatriaconta-9,27-dien-18-ol (4.0 g, 7.7 mmol) obtained in step (a5), Fmoc-Asp(tBu)-OH (3.8 g, 9.2 mmol) in which the amino and carboxyl groups of aspartic acid had been protected with Fmoc and tBu groups, respectively, DCC (2.3 g, 11.5 mmol), and DMAP (0.28 g, 2.3 mmol) were dissolved in dichloromethane (15 mL). After stirring at room temperature until the next day, the mixture was quenched with water, and the precipitated dicyclohexylurea was removed by filtration. The filtrate was concentrated, the residue was dissolved in ethyl acetate, and the organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate solution, and ion-exchanged water, and then concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired 4-(tert-butyl) 1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)(((9H-fluoren-9-yl)methoxy)carbonyl)aspartate (3.5 g, 3.8 mmol, 50%).
[0078] Step (a7): Synthesis of 4-(tert-butyl) 1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)aspartate [ka] 4-(tert-butyl) 1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)(((9H-fluoren-9-yl)methoxy)carbonyl)aspartate (3.0 g, 3.3 mmol) obtained in step (a6) was dissolved in a 20% piperidine / DMF solution (40 mL). After stirring at room temperature until the next day, the solvent was concentrated under reduced pressure. The residue was dispersed in ethyl acetate, and the precipitate was removed by filtration. The filtrate was dissolved in ethyl acetate, and the organic phase was washed with 10% hydrochloric acid, saturated aqueous sodium bicarbonate, and ion-exchanged water, and then the organic phase was concentrated under reduced pressure. The obtained crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired 4-(tert-butyl) 1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)aspartate (1.2 g, 1.7 mmol, 53%).
[0079] Step (a8): Synthesis of 4-(tert-butyl)1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)N2-(((9H-fluoren-9-yl)methoxy)carbonyl)-Nw-((2,2,4,6,7-pentamethyl-2,3-dihydrobenzofuran-5-yl)sulfonyl)arginyl aspartate [ka] 4-(tert-butyl) 1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)aspartate (1.0 g, 1.4 mmol) obtained in step (a7), Fmoc-Arg(Pbf)-OH (1.88 g, 2.9 mmol) (manufactured by TCI), and DCC (0.42 g, 2.9 mmol) were dissolved in dichloromethane (9 mL). After stirring at room temperature until the next day, the mixture was quenched with water, and the precipitated dicyclohexylurea was removed by filtration. The filtrate was concentrated, and the residue was dissolved in ethyl acetate. The organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate water, and ion-exchanged water, and then concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired 4-(tert-butyl)1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)N2-(((9H-fluoren-9-yl)methoxy)carbonyl)-Nw-((2,2,4,6,7-pentamethyl-2,3-dihydrobenzofuran-5-yl)sulfonyl)arginyl aspartate (1.8 g, 1.4 mmol, 94%).
[0080] Step (a9): Synthesis of 4-(tert-butyl)1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)Nw-((2,2,4,6,7-pentamethyl-2,3-dihydrobenzofuran-5-yl)sulfonyl)arginyl aspartate [ka] 4-(tert-butyl)1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)N2-(((9H-fluoren-9-yl)methoxy)carbonyl)-Nw-((2,2,4,6,7-pentamethyl-2,3-dihydrobenzofuran-5-yl)sulfonyl)arginyl aspartate (1.8 g, 1.4 mmol) obtained in step (a8) was dissolved in a 20% piperidine / DMF solution (6 mL). After stirring at room temperature until the next day, the solvent was concentrated under reduced pressure. The residue was dispersed in ethyl acetate, and the precipitate was removed by filtration. The filtrate was dissolved in ethyl acetate, and the organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate water, and ion-exchanged water, and then the organic phase was concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired 4-(tert-butyl) 1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)Nw-((2,2,4,6,7-pentamethyl-2,3-dihydrobenzofuran-5-yl)sulfonyl)arginyl aspartate (0.9 g, 1.1 mmol, 73%).
[0081] Step (a10): Synthesis of 3-(2-amino-5-guanidinopentanamide)-4-(((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)oxy)-4-oxobutanoic acid (lipid (Ia)) [ka] 4-(tert-butyl) 1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)Nw-((2,2,4,6,7-pentamethyl-2,3-dihydrobenzofuran-5-yl)sulfonyl)arginyl aspartate (0.9 g, 1.1 mmol) obtained in step (a9) was dissolved in TFA (10 mL). After stirring at room temperature for 1 hour, the solvent was concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / methanol) to obtain the desired 3-(2-amino-5-guanidinopentanamide)-4-(((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)oxy)-4-oxobutanoic acid (lipid (Ia)) (0.3 g, 0.37 mmol, 36%).
[0082] 1 H-NMR (400MHz, CHLOROFORM-D) δ5.47-5.13 (4H), 4.93-4.61 (2H), 4.13-3.73 (1H), 3.36-2.90 (2H), 2.89-2.42 (2H), 2.11-1.76 (10H), 1.57-1.42 (6H), 1.42-0.98 (46H), 0.98-0.25 (6H) [C 46 H 87 N5O5H] + : 790.73
[0083] [Example 2] Synthesis of 4-(2-amino-5-guanidinopentanamide)-5-(((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)oxy)-5-oxopentanoic acid (hereinafter also referred to as lipid (Ib)) Lipid (Ib) is a lipid in which the first amino acid of lipid (Ia) is changed to Glu. A method for synthesizing lipid (Ib) is described below. Note that the steps for synthesizing the lipophilic region in the synthesis process are the same as steps (a1) to (a5) for lipid (Ia), and therefore will not be described here.
[0084] Step (b6): Synthesis of 5-(tert-butyl) 1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)(((9H-fluoren-9-yl)methoxy)carbonyl)glutamate [ka] (9Z,27Z)-hexatriaconta-9,27-dien-18-ol (3.0 g, 5.7 mmol) obtained in step (a5), Fmoc-Glu(tBu)-OH (4.92 g, 11.5 mmol) in which the amino and carboxyl groups of glutamic acid had been protected with Fmoc and tBu groups, respectively, DCC (2.6 g, 13 mmol), and DMAP (0.24 g, 1.9 mmol) were dissolved in dichloromethane (40 mL). After stirring at room temperature until the next day, the mixture was quenched with water, and the precipitated dicyclohexylurea was removed by filtration. The filtrate was concentrated, the residue was dissolved in ethyl acetate, and the organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate solution, and ion-exchanged water, and then concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired 5-(tert-butyl) 1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)(((9H-fluoren-9-yl)methoxy)carbonyl)glutamate (6.8 g, 7.6 mmol, 79%).
[0085] Step (b7): Synthesis of 5-(tert-butyl) 1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)glutamate [ka] 5-(tert-butyl) 1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)(((9H-fluoren-9-yl)methoxy)carbonyl)glutamate (3.6 g, 3.8 mmol) obtained in step (b6) was dissolved in a 20% piperidine / DMF solution (40 mL). After stirring at room temperature until the next day, the solvent was concentrated under reduced pressure. The residue was dispersed in ethyl acetate, and the precipitate was removed by filtration. The filtrate was dissolved in ethyl acetate, and the organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate water, and ion-exchanged water, and then the organic phase was concentrated under reduced pressure. The obtained crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired 5-(tert-butyl) 1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)glutamate (1.6 g, 2.3 mmol, 58%).
[0086] Step (b8): Synthesis of 5-(tert-butyl)1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)N2-(((9H-fluoren-9-yl)methoxy)carbonyl)-Nw-((2,2,4,6,7-pentamethyl-2,3-dihydrobenzofuran-5-yl)sulfonyl)arginyl glutamate [ka] 5-(tert-butyl) 1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)glutamate (1.6 g, 2.3 mmol) obtained in step (b7), Fmoc-Arg(Pbf)-OH (2.95 g, 4.5 mmol) in which the amino and guanidino groups of arginine had been protected with Fmoc and Pbf groups, respectively, and DCC (0.65 g, 4.5 mmol) were dissolved in dichloromethane (10 mL). After stirring at room temperature until the next day, the mixture was quenched with water, and the precipitated dicyclohexylurea was removed by filtration. The filtrate was concentrated, the residue was dissolved in ethyl acetate, and the organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate water, and ion-exchanged water, and then concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired 5-(tert-butyl)1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)N2-(((9H-fluoren-9-yl)methoxy)carbonyl)-Nw-((2,2,4,6,7-pentamethyl-2,3-dihydrobenzofuran-5-yl)sulfonyl)arginyl glutamate (2.8 g, 2.1 mmol, 92%).
[0087] Step (b9): Synthesis of 5-(tert-butyl)1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)Nw-((2,2,4,6,7-pentamethyl-2,3-dihydrobenzofuran-5-yl)sulfonyl)arginyl glutamate [ka] 5-(tert-butyl)1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)N2-(((9H-fluoren-9-yl)methoxy)carbonyl)-Nw-((2,2,4,6,7-pentamethyl-2,3-dihydrobenzofuran-5-yl)sulfonyl)arginyl glutamate (2.8 g, 2.1 mmol) obtained in step (b8) was dissolved in a 20% piperidine / DMF solution (6 mL). After stirring at room temperature until the next day, the solvent was concentrated under reduced pressure. The residue was dispersed in ethyl acetate, and the precipitate was removed by filtration. The filtrate was dissolved in ethyl acetate, and the organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate water, and ion-exchanged water, and then the organic phase was concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired 5-(tert-butyl) 1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)Nw-((2,2,4,6,7-pentamethyl-2,3-dihydrobenzofuran-5-yl)sulfonyl)arginyl glutamate (1.2 g, 1.4 mmol, 68%).
[0088] Step (b10): Synthesis of 4-(2-amino-5-guanidinopentanamide)-5-(((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)oxy)-5-oxopentanoic acid (lipid (Ib)) [ka] 5-(tert-butyl) 1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)Nw-((2,2,4,6,7-pentamethyl-2,3-dihydrobenzofuran-5-yl)sulfonyl)arginyl glutamate (1.2 g, 1.4 mmol) obtained in step (b9) was dissolved in TFA (10 mL). After stirring at room temperature for 1 hour, the solvent was concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / methanol) to obtain the desired 4-(2-amino-5-guanidinopentanamide)-5-(((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)oxy)-5-oxopentanoic acid (lipid (Ib)) (0.3 g, 0.37 mmol, 27%).
[0089] 1 H-NMR (400MHz, CHLOROFORM-D) δ5.43-5.19 (4H), 5.09-4.96 (1H), 4.91-4.74 (1H), 4.69-4.46 (1H), 3.71-3.52 (2H), 3.33-2.99 (2H), 2.58-2.31 (2H), 2.03-1.84 (8H), 1.81-1.69 (2H), 1.68-1.42 (6H), 1.41-0.98 (46H), 0.96-0.71 (6H) [C 47 H 89 N5O5H] + :804.75
[0090] [Example 3] Synthesis of (9Z,27Z)-hexatriaconta-9,27-dien-18-ylarginyl histidinate (hereinafter also referred to as lipid (Ic)) Lipid (Ic) is a lipid in which the first amino acid of lipid (Ia) is changed to His. A method for synthesizing lipid (Ic) is described below. Note that the steps for synthesizing the lipophilic region in the synthesis process are the same as steps (a1) to (a5) for lipid (Ia), and therefore will not be described here.
[0091] Step (c6): Synthesis of (9Z,27Z)-hexatriaconta-9,27-dien-18-ylNa-(((9H-fluoren-9-yl)methoxy)carbonyl)-Nt-tritylhistidinate [ka] (9Z,27Z)-hexatriaconta-9,27-dien-18-ol (3.0 g, 5.8 mmol) obtained in step (a5), Fmoc-His(Trt)-OH (4.3 g, 6.9 mmol) in which the histidine amino and imidazole groups had been protected (Fmoc and Trt groups, respectively), DCC (1.8 g, 8.6 mmol), and DMAP (0.10 g, 0.58 mmol) were dissolved in dichloromethane (30 mL). After stirring at room temperature until the next day, the mixture was quenched with water, and the precipitated dicyclohexylurea was removed by filtration. The filtrate was concentrated, the residue was dissolved in ethyl acetate, and the organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate solution, and ion-exchanged water, and then concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired (9Z,27Z)-hexatriaconta-9,27-dien-18-yl Na-(((9H-fluoren-9-yl)methoxy)carbonyl)-Nt-tritylhistidinate (3.8 g, 3.4 mmol, 58%).
[0092] Step (c7): Synthesis of (9Z,27Z)-hexatriaconta-9,27-dien-18-yl-Nt-tritylhistidinate [ka] The (9Z,27Z)-hexatriaconta-9,27-dien-18-yl Na-(((9H-fluoren-9-yl)methoxy)carbonyl)-Nt-tritylhistidinate (3.8 g, 3.4 mmol) obtained in step (c6) was dissolved in a 20% piperidine / DMF solution (40 mL). After stirring at room temperature until the next day, the solvent was concentrated under reduced pressure. The residue was dispersed in ethyl acetate, and the precipitate was removed by filtration. The filtrate was dissolved in ethyl acetate, and the organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate water, and ion-exchanged water, and then the organic phase was concentrated under reduced pressure. The obtained crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired (9Z,27Z)-hexatriaconta-9,27-dien-18-yl-Nt-tritylhistidinate (2.0 g, 2.2 mmol, 53%).
[0093] Step (c8): Synthesis of (9Z,27Z)-hexatriaconta-9,27-dien-18-ylNa-(N2-(((9H-fluoren-9-yl)methoxy)carbonyl)-Nw-(2,2,4,6,7-pentamethyl-2,3-dihydrobenzofuran-5-yl)arginyl)-Nt-tritylhistidinate [ka] (9Z,27Z)-hexatriaconta-9,27-dien-18-yl-Nt-tritylhistidinate (2.2 g, 3.0 mmol) obtained in step (c7), Fmoc-Arg(Pbf)-OH (1.7 g, 2.6 mmol) in which the amino and guanidino groups of arginine had been protected with Fmoc and Pbf groups, respectively, DCC (0.67 g, 3.5 mmol), and DMAP (27 mg, 0.10 mmol) were dissolved in dichloromethane (20 mL). After stirring at room temperature until the next day, the mixture was quenched with water, and the precipitated dicyclohexylurea was removed by filtration. The filtrate was concentrated, the residue was dissolved in ethyl acetate, and the organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate solution, and ion-exchanged water, and then concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired (9Z,27Z)-hexatriaconta-9,27-dien-18-yl Na-(N2-(((9H-fluoren-9-yl)methoxy)carbonyl)-Nw-(2,2,4,6,7-pentamethyl-2,3-dihydrobenzofuran-5-yl)arginyl)-Nt-tritylhistidinate (2.3 g, 1.6 mmol, 72%).
[0094] Step (c9): Synthesis of (9Z,27Z)-hexatriaconta-9,27-dien-18-ylNa-(Nw-(2,2,4,6,7-pentamethyl-2,3-dihydrobenzofuran-5-yl)arginyl)-Nt-tritylhistidinate [ka] (9Z,27Z)-hexatriaconta-9,27-dien-18-ylNa-(N2-(((9H-fluoren-9-yl)methoxy)carbonyl)-Nw-(2,2,4,6,7-pentamethyl-2,3-dihydrobenzofuran-5-yl)arginyl)-Nt-tritylhistidinate (2.3 g, 1.6 mmol) obtained in step (c8) was dissolved in a 20% piperidine / DMF solution (6 mL). After stirring at room temperature until the next day, the solvent was concentrated under reduced pressure. The residue was dispersed in ethyl acetate, and the precipitate was removed by filtration. The filtrate was dissolved in ethyl acetate, and the organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate water, and ion-exchanged water, and then the organic phase was concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired (9Z,27Z)-hexatriaconta-9,27-dien-18-yl Na-(Nw-(2,2,4,6,7-pentamethyl-2,3-dihydrobenzofuran-5-yl)arginyl)-Nt-tritylhistidinate (1.5 g, 1.2 mmol, 75%).
[0095] Step (c10): Synthesis of (9Z,27Z)-hexatriaconta-9,27-dien-18-ylarginyl histidinate (lipid (Ic)) [ka] (9Z,27Z)-hexatriaconta-9,27-dien-18-yl Na-(Nw-(2,2,4,6,7-pentamethyl-2,3-dihydrobenzofuran-5-yl)arginyl)-Nt-trityl histidinate (1.5 g, 1.2 mmol) obtained in step (c9) was dissolved in TFA (10 mL). After stirring at room temperature for 1 hour, the solvent was concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / methanol) to obtain the desired (9Z,27Z)-hexatriaconta-9,27-dien-18-yl arginyl histidinate (lipid (Ic)) (0.2 g, 0.26 mmol, 22%).
[0096] 1H-NMR (400MHz, CHLOROFORM-D) δ7.86-7.44 (1H), 7.09-6.74 (1H), 5.40-5.22 (4H), 4.91-4.78 (1H), 4.16-3.97 (1H), 3.78-3.31 (3H), 3.27-3.06 (2H), 2.10-1.84 (8H), 1.84-1.60 (2H), 1.60-1.47 (6H), 1.36-1.00 (46H), 0.93-0.76 (6H) [C 48 H 89 N7O3H] + :812.74
[0097] [Example 4] Synthesis of (9Z,27Z)-hexatriaconta-9,27-dien-18-yl(2S)-2-((S)-2-amino-5-guanidinopentanamide)-3-hydroxypropionate (hereinafter also referred to as lipid (Id)) Lipid (Id) is a lipid in which the first amino acid of lipid (Ia) is changed to Ser. The synthesis method of lipid (Id) is explained below. Note that the step of synthesizing the lipophilic region in the synthesis process is the same as steps (a1) to (a5) of lipid (Ia), so it will be omitted.
[0098] Step (d6): Synthesis of (9Z,27Z)-hexatriaconta-9,27-dien-18-yl N-(((9H-fluoren-9-yl)methoxy)carbonyl)-O-(tert-butyl)serinate [ka] (9Z,27Z)-hexatriaconta-9,27-dien-18-ol (3.0 g, 5.7 mmol) obtained in step (a5), Fmoc-Ser(tBu)-OH (2.7 g, 6.9 mmol) in which the amino and hydroxy groups of serine had been protected with Fmoc and tBu groups, respectively, DCC (1.8 g, 8.7 mmol), and DMAP (70 mg, 0.58 mmol) were dissolved in dichloromethane (30 mL). After stirring at room temperature until the next day, the mixture was quenched with water, and the precipitated dicyclohexylurea was removed by filtration. The filtrate was concentrated, the residue was dissolved in ethyl acetate, and the organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate solution, and ion-exchanged water, and then concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired (9Z,27Z)-hexatriaconta-9,27-dien-18-yl N-(((9H-fluoren-9-yl)methoxy)carbonyl)-O-(tert-butyl)serinate (3.7 g, 4.2 mmol, 72%).
[0099] Step (d7): Synthesis of (9Z,27Z)-hexatriaconta-9,27-dien-18-yl O-(tert-butyl)serinate [ka] (9Z,27Z)-hexatriaconta-9,27-dien-18-yl N-(((9H-fluoren-9-yl)methoxy)carbonyl)-O-(tert-butyl)serinate (3.7 g, 4.2 mmol) obtained in step (d6) was dissolved in a 20% piperidine / DMF solution (40 mL). After stirring at room temperature until the next day, the solvent was concentrated under reduced pressure. The residue was dispersed in ethyl acetate, and the precipitate was removed by filtration. The filtrate was dissolved in ethyl acetate, and the organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate water, and ion-exchanged water, and then the organic phase was concentrated under reduced pressure. The obtained crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired (9Z,27Z)-hexatriaconta-9,27-dien-18-yl O-(tert-butyl)serinate (2.4 g, 3.6 mmol, 86%).
[0100] Step (d8): Synthesis of (9Z,27Z)-hexatriaconta-9,27-dien-18-yl N-(N2-(((9H-fluoren-9-yl)methoxy)carbonyl)-Nw-(2,2,4,6,7-pentamethyl-2,3-dihydrobenzofuran-5-yl)arginyl)-O-(tert-butyl)serinate [ka] (9Z,27Z)-hexatriaconta-9,27-dien-18-yl O-(tert-butyl)serinate (2.4 g, 3.6 mmol) obtained in step (d7), Fmoc-Arg(Pbf)-OH (2.8 g, 4.3 mmol) in which the amino and guanidino groups of arginine had been protected with Fmoc and Pbf groups, respectively, DCC (1.1 g, 5.4 mmol), and DMAP (44 mg, 0.36 mmol) were dissolved in dichloromethane (24 mL). After stirring at room temperature until the next day, the mixture was quenched with water, and the precipitated dicyclohexylurea was removed by filtration. The filtrate was concentrated, the residue was dissolved in ethyl acetate, and the organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate solution, and ion-exchanged water, and then concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired (9Z,27Z)-hexatriaconta-9,27-dien-18-yl N-(N2-(((9H-fluoren-9-yl)methoxy)carbonyl)-Nw-(2,2,4,6,7-pentamethyl-2,3-dihydrobenzofuran-5-yl)arginyl)-O-(tert-butyl)serinate (3.0 g, 2.4 mmol, 68%).
[0101] Step (d9): Synthesis of (9Z,27Z)-hexatriaconta-9,27-dien-18-yl O-(tert-butyl)-N-(Nw-(2,2,4,6,7-pentamethyl-2,3-dihydrobenzofuran-5-yl)arginyl)serinate [ka] (9Z,27Z)-hexatriaconta-9,27-dien-18-yl N-(N2-(((9H-fluoren-9-yl)methoxy)carbonyl)-Nw-(2,2,4,6,7-pentamethyl-2,3-dihydrobenzofuran-5-yl)arginyl)-O-(tert-butyl)serinate (3.0 g, 2.4 mmol) obtained in step (a8) was dissolved in a 20% piperidine / DMF solution (6 mL). After stirring at room temperature until the next day, the solvent was concentrated under reduced pressure. The residue was dispersed in ethyl acetate, and the precipitate was removed by filtration. The filtrate was dissolved in ethyl acetate, and the organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate water, and ion-exchanged water, and then the organic phase was concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired (9Z,27Z)-hexatriaconta-9,27-dien-18-yl O-(tert-butyl)-N-(Nw-(2,2,4,6,7-pentamethyl-2,3-dihydrobenzofuran-5-yl)arginyl)serinate (1.8 g, 1.8 mmol, 72%).
[0102] Step (d9): Synthesis of (9Z,27Z)-hexatriaconta-9,27-dien-18-ylarginylserinate (lipid (Id)) [ka] (9Z,27Z)-hexatriaconta-9,27-dien-18-yl O-(tert-butyl)-N-(Nw-(2,2,4,6,7-pentamethyl-2,3-dihydrobenzofuran-5-yl)arginyl)serinate (1.8 g, 1.8 mmol) obtained in step (d8) was dissolved in TFA (10 mL). After stirring at room temperature for 1 hour, the solvent was concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / methanol) to obtain the desired (9Z,27Z)-hexatriaconta-9,27-dien-18-ylarginylserinate (lipid (Id)) (0.20 g, 0.26 mmol, 15%).
[0103] 1H-NMR (400MHz, CHLOROFORM-D) δ5.33 (dd, 4H), 4.81 (s, 2H), 4.70-3.46 (m, 3H), 3.46-2.81 (m, 2H), 2.27-1.85 (m, 10H), 1.85-1.37 (m, 6H), 1.37-0.93 (m, 46H), 0.87 (td, 6H) [C 45 H 87 N5O4H] + :762.92
[0104] [Example 5] Synthesis of (9Z,27Z)-hexatriaconta-9,27-dien-18-yl(2S)-2-((S)-2-amino-5-guanidinopentanamide)-3-hydroxybutanoate (hereinafter also referred to as lipid (Ie)) Lipid (Ie) is a lipid in which the first amino acid of lipid (Ia) is changed to Thr. A method for synthesizing lipid (Ie) is described below. Note that the steps for synthesizing the lipophilic region in the synthesis process are the same as steps (a1) to (a5) of lipid (Ia), and therefore will not be described here.
[0105] Step (e6): Synthesis of (9Z,27Z)-hexatriaconta-9,27-dien-18-yl(2S)-2-((((9H-fluoren-9-yl)methoxy)carbonyl)amino)-3-(tert-butoxy)butanoate [ka] (9Z,27Z)-hexatriaconta-9,27-dien-18-ol (5.0 g, 9.6 mmol) obtained in step (a5), Fmoc-Thr(tBu)-OH (4.6 g, 12 mmol) in which threonine amino and hydroxyl groups had been protected with Fmoc and tBu groups, respectively, DCC (2.6 g, 13 mmol), and DMAP (0.24 g, 1.9 mmol) were dissolved in dichloromethane (40 mL). After stirring at room temperature until the next day, the mixture was quenched with water, and the precipitated dicyclohexylurea was removed by filtration. The filtrate was concentrated, the residue was dissolved in ethyl acetate, and the organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate solution, and ion-exchanged water, and then concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired (9Z,27Z)-hexatriaconta-9,27-dien-18-yl(2S)-2-((((9H-fluoren-9-yl)methoxy)carbonyl)amino)-3-(tert-butoxy)butanoate (6.8 g, 7.6 mmol, 79%).
[0106] Step (e7): Synthesis of (9Z,27Z)-hexatriaconta-9,27-dien-18-yl(2S)-2-amino-3-(tert-butoxy)butanoate [ka] (9Z,27Z)-hexatriaconta-9,27-dien-18-yl(2S)-2-((((9H-fluoren-9-yl)methoxy)carbonyl)amino)-3-(tert-butoxy)butanoate (5.0 g, 5.6 mmol) obtained in step (e6) was dissolved in a 20% piperidine / DMF solution (40 mL). After stirring at room temperature until the next day, the solvent was concentrated under reduced pressure. The residue was dispersed in ethyl acetate, and the precipitate was removed by filtration. The filtrate was dissolved in ethyl acetate, and the organic phase was washed with 10% hydrochloric acid, saturated aqueous sodium bicarbonate, and ion-exchanged water, and then the organic phase was concentrated under reduced pressure. The obtained crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired (9Z,27Z)-hexatriaconta-9,27-dien-18-yl(2S)-2-amino-3-(tert-butoxy)butanoate (2.0 g, 3.0 mmol, 53%).
[0107] Step (e8): Synthesis of (9Z,27Z)-hexatriaconta-9,27-dien-18-yl(2S)-3-(tert-butoxy)-2-((S)-2-((tert-butoxycarbonyl)amino)-5-(3-((2,2,4,6,7-pentamethyl-2,3-dihydrobenzofuran-5-yl)sulfonyl)guanidino)pentanamido)butanoate [ka] (9Z,27Z)-hexatriaconta-9,27-dien-18-yl(2S)-2-amino-3-(tert-butoxy)butanoate (2.0 g, 3.0 mmol) obtained in step (e7), Boc-Arg(Pbf)-OH (1.7 g, 3.3 mmol) in which the amino and guanidino groups of arginine had been protected with Boc and Pbf groups, respectively, DCC (0.73 g, 3.5 mmol), and DMAP (36 mg, 0.30 mmol) were dissolved in dichloromethane (20 mL). After stirring at room temperature until the next day, the mixture was quenched with water, and the precipitated dicyclohexylurea was removed by filtration. The filtrate was concentrated, the residue was dissolved in ethyl acetate, and the organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate solution, and ion-exchanged water, and then concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired (9Z,27Z)-hexatriaconta-9,27-dien-18-yl(2S)-3-(tert-butoxy)-2-((S)-2-((tert-butoxycarbonyl)amino)-5-(3-((2,2,4,6,7-pentamethyl-2,3-dihydrobenzofuran-5-yl)sulfonyl)guanidino)pentanamide)butanoate (3.1 g, 2.6 mmol, 88%).
[0108] Step (e9): Synthesis of (9Z,27Z)-hexatriaconta-9,27-dien-18-yl(2S)-2-((S)-2-amino-5-guanidinopentanamide)-3-hydroxybutanoate (lipid (Ie)) [ka] (9Z,27Z)-hexatriaconta-9,27-dien-18-yl(2S)-3-(tert-butoxy)-2-((S)-2-((tert-butoxycarbonyl)amino)-5-(3-((2,2,4,6,7-pentamethyl-2,3-dihydrobenzofuran-5-yl)sulfonyl)guanidino)pentanamido)butanoate (2.0 g, 1.7 mmol) obtained in step (e8) was dissolved in TFA (10 mL). After stirring at room temperature for 1 hour, the solvent was concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / methanol) to obtain the desired (9Z,27Z)-hexatriaconta-9,27-dien-18-yl(2S)-2-((S)-2-amino-5-guanidinopentanamide)-3-hydroxybutanoate (lipid (Ie)) (0.3 g, 0.38 mmol, 20%).
[0109] 1 H-NMR (400MHz, CHLOROFORM-D) δ5.45-5.19 (4H), 4.88-4.76 (1H), 4.45-4.32 (1H), 4.30-4.10(2H), 3.28-2.98 (2H), 2.16-1.88 (10H), 1.88-1.62 (2H), 1.62-1.48(4H), 1.39-0.94 (49H), 0.93-0.78 (6H) [C 46 H 89 N5O4H] + :776.72
[0110] [Example 6] Synthesis of (9Z,27Z)-hexatriaconta-9,27-dien-18-ylarginyl methioninate (hereinafter also referred to as lipid (If)) Lipid (If) is a lipid in which the first amino acid of lipid (Ia) is changed to Met. A method for synthesizing lipid (If) is described below. Note that the step of synthesizing the lipophilic region in the synthesis process is the same as steps (a1) to (a5) of lipid (Ia), and therefore will not be described here.
[0111] Step (f6): Synthesis of (9Z,27Z)-hexatriaconta-9,27-dien-18-yl(((9H-fluoren-9-yl)methoxy)carbonyl)methioninate [ka] (9Z,27Z)-hexatriaconta-9,27-dien-18-ol (3.0 g, 5.8 mmol) obtained in step (a5), Fmoc-Met-OH (2.7 g, 6.9 mmol) in which a protecting group (Fmoc group) had been added to the methionine amino group, DCC (1.8 g, 8.7 mmol), and DMAP (70 mg, 0.58 mmol) were dissolved in dichloromethane (30 mL). After stirring at room temperature until the next day, the mixture was quenched with water, and the precipitated dicyclohexylurea was removed by filtration. The filtrate was concentrated, the residue was dissolved in ethyl acetate, and the organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate solution, and ion-exchanged water, and then concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired (9Z,27Z)-hexatriaconta-9,27-dien-18-yl(((9H-fluoren-9-yl)methoxy)carbonyl)methioninate (2.9 g, 3.4 mmol, 58%).
[0112] Step (f7): Synthesis of (9Z,27Z)-hexatriaconta-9,27-dien-18-yl methioninate [ka] (9Z,27Z)-hexatriaconta-9,27-dien-18-yl (((9H-fluoren-9-yl)methoxy)carbonyl)methioninate (2.9 g, 3.4 mmol) obtained in step (f6) was dissolved in a 20% piperidine / DMF solution (15 mL). After stirring at room temperature until the next day, the solvent was concentrated under reduced pressure. The residue was dispersed in ethyl acetate, and the precipitate was removed by filtration. The filtrate was dissolved in ethyl acetate, and the organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate water, and ion-exchanged water, and then the organic phase was concentrated under reduced pressure. The obtained crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired (9Z,27Z)-hexatriaconta-9,27-dien-18-ylmethioninate (1.9 g, 2.9 mmol, 87%).
[0113] Step (f8): Synthesis of (9Z,27Z)-hexatriaconta-9,27-dien-18-ylN2-(((9H-fluoren-9-yl)methoxy)carbonyl)-Nw-(2,2,4,6,7-pentamethyl-2,3-dihydrobenzofuran-5-yl)arginyl methioninate [ka] (9Z,27Z)-hexatriaconta-9,27-dien-18-yl methioninate (1.9 g, 2.9 mmol) obtained in step (f7), Fmoc-Arg(Pbf)-OH (2.3 g, 3.5 mmol) in which the amino and guanidino groups of arginine had been protected with Fmoc and Pbf groups, respectively, DCC (0.90 g, 4.4 mmol), and DMAP (36 mg, 0.29 mmol) were dissolved in dichloromethane (30 mL). After stirring at room temperature until the next day, the mixture was quenched with water, and the precipitated dicyclohexylurea was removed by filtration. The filtrate was concentrated, the residue was dissolved in ethyl acetate, and the organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate solution, and ion-exchanged water, and then concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired (9Z,27Z)-hexatriaconta-9,27-dien-18-yl N2-(((9H-fluoren-9-yl)methoxy)carbonyl)-Nw-(2,2,4,6,7-pentamethyl-2,3-dihydrobenzofuran-5-yl)arginyl methioninate (2.6 g, 2.1 mmol, 71%).
[0114] Step (f9): Synthesis of (9Z,27Z)-hexatriaconta-9,27-dien-18-yl Nw-(2,2,4,6,7-pentamethyl-2,3-dihydrobenzofuran-5-yl)arginyl methioninate [ka] (9Z,27Z)-hexatriaconta-9,27-dien-18-yl N2-(((9H-fluoren-9-yl)methoxy)carbonyl)-Nw-(2,2,4,6,7-pentamethyl-2,3-dihydrobenzofuran-5-yl)arginyl methioninate (2.6 g, 2.1 mmol) obtained in step (f8) was dissolved in a 20% piperidine / DMF solution (15 mL). After stirring at room temperature until the next day, the solvent was concentrated under reduced pressure. The residue was dispersed in ethyl acetate, and the precipitate was removed by filtration. The filtrate was dissolved in ethyl acetate, and the organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate water, and ion-exchanged water, and then the organic phase was concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired (9Z,27Z)-hexatriaconta-9,27-dien-18-yl Nw-(2,2,4,6,7-pentamethyl-2,3-dihydrobenzofuran-5-yl)arginyl methioninate (1.3 g, 1.2 mmol, 58%).
[0115] Step (f10): Synthesis of (9Z,27Z)-hexatriaconta-9,27-dien-18-yl N-(2-amino-5-guanidino-1-iminopentyl)-S-ethyl homocysteinate (lipid (If)) [ka] (9Z,27Z)-Hexatriaconta-9,27-dien-18-yl Nw-(2,2,4,6,7-pentamethyl-2,3-dihydrobenzofuran-5-yl)arginyl methioninate (1.3 g, 1.2 mmol) obtained in step (f9) was dissolved in TFA (10 mL). After stirring at room temperature for 1 hour, the solvent was concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / methanol) to obtain the desired (9Z,27Z)-hexatriaconta-9,27-dien-18-yl N-(2-amino-5-guanidino-1-iminopentyl)-S-ethyl homocysteinate (lipid (If)) (0.21 g, 0.26 mmol, 22%).
[0116] 1H-NMR (400MHz, CHLOROFORM-D) δ5.34 (d, 4H), 5.03 (s, 1H), 4.78 (d, 1H), 3.10-2.82 (m, 5H), 2.22-1.72 (m, 13H), 1.70-1.60 (2H), 1.60-1.36 (m, 6H), 1.24 (s, 46H), 0.99-0.76 (m, 6H) [C 47 H 91 N5O3SH] + :806.73
[0117] [Example 7] Synthesis of 3-(2,6-diaminohexanamido)-4-(((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)oxy)-4-oxobutanoic acid (hereinafter referred to as lipid (Ig)) Lipid (Ig) is a lipid in which the second amino acid of lipid (Ia) is changed to Lys. A method for synthesizing lipid (Ig) is described below. The steps of synthesizing the lipophilic region and binding the lipophilic region to the first amino acid are the same as steps (a1) to (a7) of lipid (Ia), and therefore will be omitted.
[0118] Step (g8): Synthesis of 4-(tert-butyl)1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)N2-(((9H-fluoren-9-yl)methoxy)carbonyl)-N6-(tert-butoxycarbonyl)lysylaspartic acid [ka] 4-(tert-butyl)1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)aspartic acid (1.5 g, 2.2 mmol) obtained in step (a7), Fmoc-Lys(Boc)-OH (1.2 g, 2.6 mmol) in which the amino and guanidino groups of lysine had been protected with Fmoc and Boc groups, respectively, DCC (0.67 g, 3.3 mmol), and DMAP (27 mg, 0.22 mmol) were dissolved in dichloromethane (22 mL). After stirring at room temperature until the next day, the mixture was quenched with water, and the precipitated dicyclohexylurea was removed by filtration. The filtrate was concentrated, the residue was dissolved in ethyl acetate, and the organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate water, and ion-exchanged water, and then concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired 4-(tert-butyl)1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)N2-(((9H-fluoren-9-yl)methoxy)carbonyl)-N6-(tert-butoxycarbonyl)lysyl aspartic acid (1.7 g, 1.5 mmol, 68%).
[0119] Step (g9): Synthesis of 4-(tert-butyl) 1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)N6-(tert-butoxycarbonyl) lysyl aspartate [ka] 4-(tert-butyl)1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)N2-(((9H-fluoren-9-yl)methoxy)carbonyl)-N6-(tert-butoxycarbonyl)lysyl aspartic acid (1.7 g, 1.5 mmol) obtained in step (g8) was dissolved in a 20% piperidine / DMF solution (15 mL). After stirring at room temperature until the next day, the solvent was concentrated under reduced pressure. The residue was dispersed in ethyl acetate, and the precipitate was removed by filtration. The filtrate was dissolved in ethyl acetate, and the organic phase was washed with 10% hydrochloric acid, saturated aqueous sodium bicarbonate, and ion-exchanged water, and then the organic phase was concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired 4-(tert-butyl) 1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)N6-(tert-butoxycarbonyl) lysyl aspartate (0.88 g, 0.96 mmol, 65%).
[0120] Step (g10): Synthesis of 3-(2,6-diaminohexanamido)-4-(((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)oxy)-4-oxobutanoic acid [ka] 4-(tert-butyl) 1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)N6-(tert-butoxycarbonyl) lysyl aspartate (0.88 g, 0.96 mmol) obtained in step (d9) was dissolved in TFA (10 mL). After stirring at room temperature for 1 hour, the solvent was concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / methanol) to obtain the desired 3-(2,6-diaminohexanamido)-4-(((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)oxy)-4-oxobutanoic acid (lipid (Ig)) (0.26 g, 0.34 mmol, 35%).
[0121] 1H-NMR (400MHz, CHLOROFORM-D) δ5.32 (t, 4H), 4.90-4.62 (m, 1H),4.14(m, 1H)3.02 (s, 2H), 2.95-2.60 (m, 1H), 2.12-1.81 (m, 8H), 1.72 (s, 2H), 1.65-1.42 (m, 6H), 1.35-0.98 (m, 48H), 0.86 (t, 6H) [C 46 H 87 N3O5H] + :762.74
[0122] [Example 8] Synthesis of 4-(2,6-diaminohexanamido)-5-(((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)oxy)-5-oxopentanoic acid (hereinafter also referred to as lipid (Ih)) Lipid (Ih) is a lipid in which the first amino acid of lipid (Ia) is changed to Glu and the second amino acid is changed to Lys. A method for synthesizing lipid (Ih) is described below. The steps of synthesizing the lipophilic region and binding the lipophilic region to the first amino acid are the same as steps (b1) to (b7) of lipid (Ib), and therefore will not be described here.
[0123] Step (h8): Synthesis of 5-(tert-butyl)1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)N2-(((9H-fluoren-9-yl)methoxy)carbonyl)-N6-(tert-butoxycarbonyl)lysylglutamic acid [ka] 5-(tert-butyl)1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)glutamic acid (1.5 g, 2.1 mmol) obtained in step (b7), Fmoc-Lys(Boc)-OH (1.2 g, 2.6 mmol) in which the amino and guanidino groups of lysine had been protected with Fmoc and Boc groups, respectively, DCC (0.66 g, 3.2 mmol), and DMAP (26 mg, 0.21 mmol) were dissolved in dichloromethane (21 mL). After stirring at room temperature until the next day, the mixture was quenched with water, and the precipitated dicyclohexylurea was removed by filtration. The filtrate was concentrated, the residue was dissolved in ethyl acetate, and the organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate water, and ion-exchanged water, and then concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired 5-(tert-butyl)1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)N2-(((9H-fluoren-9-yl)methoxy)carbonyl)-N6-(tert-butoxycarbonyl)lysylglutamic acid (1.7 g, 1.5 mmol, 70%).
[0124] Step (h9): Synthesis of 5-(tert-butyl)1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)N6-(tert-butoxycarbonyl)lysylglutamic acid [ka] 5-(tert-butyl)1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)N2-(((9H-fluoren-9-yl)methoxy)carbonyl)-N6-(tert-butoxycarbonyl)lysylglutamic acid (1.7 g, 1.5 mmol) obtained in step (g8) was dissolved in a 20% piperidine / DMF solution (15 mL). After stirring at room temperature until the next day, the solvent was concentrated under reduced pressure. The residue was dispersed in ethyl acetate, and the precipitate was removed by filtration. The filtrate was dissolved in ethyl acetate, and the organic phase was washed with 10% hydrochloric acid, saturated aqueous sodium bicarbonate, and ion-exchanged water, and then the organic phase was concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired 5-(tert-butyl)1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)N6-(tert-butoxycarbonyl)lysylglutamic acid (1.1 g, 1.2 mmol, 78%).
[0125] Step (h10): Synthesis of 4-(2,6-diaminohexanamido)-5-(((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)oxy)-5-oxopentanoic acid [ka] 4-(tert-butyl) 1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)N6-(tert-butoxycarbonyl) lysyl aspartate (1.1 g, 1.2 mmol) obtained in step (d9) was dissolved in TFA (10 mL). After stirring at room temperature for 1 hour, the solvent was concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / methanol) to obtain the desired 4-(2,6-diaminohexanamido)-5-(((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)oxy)-5-oxopentanoic acid (lipid (Ih)) (0.23 g, 0.29 mmol, 25%).
[0126] 1H-NMR (400MHz, CHLOROFORM-D) δ7.94 (1H), 6.98 (1H), 5.39-5.25 (4H), 4.88-4.78 (1H), 4.60-4.31 (1H), 4.20-4.07 (1H), 3.51-3.43 (1H), 3.36-3.23 (2H), 3.14-2.91 (2H), 2.05-1.81 (8H), 1.82-1.70 (2H), 1.54-1.38 (6H), 1.37-1.13 (48H), 0.89-0.79 (6H) [C 47 H 89 N3O5H] + :776.70
[0127] [Example 9] Synthesis of 4-(2-amino-3-(1H-imidazol-4-yl)propanamido)-5-(((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)oxy)-5-oxopentanoic acid (hereinafter also referred to as lipid (Ii)) Lipid (Ii) is a lipid in which the first amino acid of lipid (Ia) is changed to Glu and the second amino acid is changed to His. A method for synthesizing lipid (Ii) is described below. Note that the steps of synthesizing the lipophilic region and binding the lipophilic region to the first amino acid during the synthesis process are the same as steps (b1) to (b7) of lipid (Ib), and therefore will not be described here.
[0128] Step (i8): Synthesis of 5-(tert-butyl)1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)Na-(((9H-fluoren-9-yl)methoxy)carbonyl)Nt-tritylhistidylglutamic acid [ka] 5-(tert-butyl)1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)glutamic acid (1.5 g, 2.1 mmol) obtained in step (b7), Fmoc-His(Trt)-OH (1.6 g, 2.6 mmol) in which the amino groups of histidine had been protected with Fmoc and Trt groups, respectively, DCC (0.66 g, 3.2 mmol), and DMAP (26 mg, 0.21 mmol) were dissolved in dichloromethane (21 mL). After stirring at room temperature until the next day, the mixture was quenched with water, and the precipitated dicyclohexylurea was removed by filtration. The filtrate was concentrated, the residue was dissolved in ethyl acetate, and the organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate water, and ion-exchanged water, and then concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired 5-(tert-butyl)1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)Na-(((9H-fluoren-9-yl)methoxy)carbonyl)Nt-tritylhistidylglutamic acid (1.8 g, 1.4 mmol, 65%).
[0129] Step (i9): Synthesis of 5-(tert-butyl)1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)Nt-tritylhistidylglutamic acid [ka] 5-(tert-Butyl)1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)N2-(((9H-fluoren-9-yl)methoxy)carbonyl)Nt-tritylhistidylglutamate (1.8 g, 1.4 mmol) obtained in step (i8) was dissolved in a 20% piperidine / DMF solution (15 mL). After stirring at room temperature until the next day, the solvent was concentrated under reduced pressure. The residue was dispersed in ethyl acetate, and the precipitate was removed by filtration. The filtrate was dissolved in ethyl acetate, and the organic phase was washed with 10% hydrochloric acid, saturated aqueous sodium bicarbonate, and ion-exchanged water, and then the organic phase was concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired 5-(tert-butyl)1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)Nt-tritylhistidylglutamic acid (1.1 g, 1.0 mmol, 73%).
[0130] Step (i10): Synthesis of 4-(2-amino-3-(1H-imidazol-4-yl)propanamido)-5-(((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)oxy)-5-oxopentanoic acid [ka] 5-(tert-butyl) 1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)Nt-tritylhistidylglutamate (1.1 g, 1.0 mmol) obtained in step (i9) was dissolved in TFA (10 mL). After stirring at room temperature for 1 hour, the solvent was concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / methanol) to obtain the desired 4-(2-amino-3-(1H-imidazol-4-yl)propanamido)-5-(((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)oxy)-5-oxopentanoic acid (lipid (Ii)) (0.14 g, 0.18 mmol, 18%).
[0131] 1H-NMR (400MHz, CHLOROFORM-D) δ 5.34 (d, J = 15.1 Hz, 4H), 4.86 (s, 1H), 3.83-3.47 (m, 1H), 3.35-2.83 (m, 3H), 2.29 (s, 2H), 2.03 (d, J = 34.8 Hz, 10H), 1.66-1.36 (m, 6H), 1.24 (s, 46H), 0.96-0.74 (m, 6H) [C 47 H 84 N4O5H] + :785.65
[0132] [Example 10] Synthesis of (6Z,9Z,27Z,30Z)-hexatriaconta-6,9,27,30-tetraen-18-yl 2-(2-amino-5-guanidinopentanamido)-3-hydroxybutanoate (hereinafter also referred to as lipid (Ij)) The lipid (Ij) is a lipid in which the number of unsaturated bonds in the hydrocarbon group in the lipophilic region of the lipid (Ie) is changed.
[0133] [ka] The synthesis of the lipophilic region in the synthesis process was carried out in the same manner as steps (a1) to (a5) of lipid (Ia). The binding of the first and second amino acids to the lipophilic region was carried out in the same manner as steps (e6) to (e8) of lipid (Ie) synthesis, yielding (6Z,9Z,27Z,30Z)-hexatriaconta-6,9,27,30-tetraen-18-yl 2-(2-amino-5-guanidinopentanamido)-3-hydroxybutanoate (lipid (Ij)).
[0134] 1H-NMR (400MHz, CHLOROFORM-D) δ5.43-5.18 (8H), 4.88-4.76(1H), 4.46-4.36(1H), 4.34-4.18 (2H), 3.30-2.94 (2H), 2.78-2.72(4H), 2.10-1.82 (10H), 1.81-1.42 (6H), 1.40-0.97 (37H), 0.93-0.69 (6H) [C 46 H 85 N5O4H] + :772.70
[0135] [Example 11] Synthesis of 4-(2-amino-5-guanidinopentanamido)-5-oxo-5-(((9Z,30Z)-tetraconta-9,30-dien-18-yl)oxy)pentanoic acid (hereinafter also referred to as lipid (Ik)) Lipid (Ik) is a lipid in which the number of carbon atoms in the hydrocarbon group in the lipophilic region of lipid (Ib) is changed.
[0136] [ka] The synthesis of the lipophilic region in the synthesis process was carried out in the same manner as steps (a1) to (a5) of lipid (Ia). The binding of the first and second amino acids to the lipophilic region was carried out in the same manner as steps (b6) to (b10) of lipid (Ib) synthesis, yielding 4-(2-amino-5-guanidinopentanamido)-5-oxo-5-(((9Z,30Z)-tetraconta-9,30-dien-18-yl)oxy)pentanoic acid (lipid (Ik)).
[0137] 1H-NMR (400MHz, CHLOROFORM-D) δ 5.47-5.18 (4H),4.88-4.76(1H), 4.46-4.36(1H), 4.34-4.18 (1H), 4.16-3.92 (1H), 3.46-2.85 (2H), 2.56-2.10 (3H), 2.09-1.95 (10H), 1.77-1.57 (2H), 1.57-1.42 (4H), 1.41-1.06 (54H), 0.93-0.78 (6H) [C 51 H 97 N5O5H] + :860.74
[0138] [Example 12] Synthesis of 4-(2-amino-5-guanidinopentanamido)-5-oxo-5-(((10Z,34Z)-tetratetraconta-10,34-dien-22-yl)oxy)pentanoic acid (hereinafter also referred to as lipid (II)) Lipid (Il) is a lipid in which the number of carbon atoms in the hydrocarbon group in the lipophilic region of lipid (Ib) is changed.
[0139] [ka] The synthesis of the lipophilic region in the synthesis process was carried out in the same manner as steps (a1) to (a5) of lipid (Ia). The binding of the first and second amino acids to the lipophilic region was carried out in the same manner as steps (b6) to (b10) of lipid (Ib) synthesis, yielding 4-(2-amino-5-guanidinopentanamido)-5-oxo-5-(((10Z,34Z)-tetratetraconta-10,34-dien-22-yl)oxy)pentanoic acid (lipid (Il)).
[0140] 1H-NMR (400MHz, CHLOROFORM-D) δ5.46-5.18 (4H), 4.95-4.70 (1H), 4.70-4.41 (1H), 4.26-3.81 (1H), 3.40-2.66 (2H), 2.65-2.11 (2H), 2.08-1.81 (10H), 1.81-1.43 (8H), 1.42-0.98 (62H), 0.98-0.78 (7H) [C 55 H 105 N5O5H] + :916.92
[0141] [Comparative Example 1] Synthesis of (9Z,27Z)-hexatriaconta-9,27-dien-18-yl 2-amino-3-hydroxybutanoate (hereinafter also referred to as lipid (CEa)) [ka] The lipid (CEa) has a lipophilic region that is a hydrocarbon group with 36 carbon atoms, and a hydrophilic region that is Thr (the first amino acid). The synthesis method for lipid (CEa) was the same as steps (a1) to (a5) for lipid (Ia) for synthesizing the lipophilic region, and the binding of the first amino acid to the lipophilic region was performed in the same manner as steps (e6), (e7), and (e9) for lipid (Ie).
[0142] 1 H-NMR (400 MHz, CHLOROFORM-D) δ 5.44-5.25 (m, 4H), 5.12-4.89 (m, 1H), 3.86 (d, J = 4.6 Hz, 2H), 1.98 (q, J = 6.7 Hz, 8H), 1.72-1.33 (m, 4H), 1.42-1.06 (m, 49H), 0.97-0.76 (m, 6H)
[0143] Comparative Example 2 Synthesis of 3-guanidino-4-(((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)oxy)-4-oxobutanoic acid (hereinafter referred to as lipid (CEb)) [ka] Lipid (CEb) is a lipid in which the first amino acid of lipid (CEa) has been changed to a compound having a guanidino group. The synthesis method of lipid (CEb) is described below. Note that the step of synthesizing the lipophilic region and some of the subsequent steps in the synthesis process are the same as steps (a1) to (a7) of lipid (Ia), and therefore will be omitted.
[0144] Step: Synthesis of 4-(tert-butyl) 1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)((E)-N,N'-bis(tert-butoxycarbonyl)carbamimidoyl)aspartate [ka] 4-(tert-butyl) 1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)aspartate (1.5 g, 2.2 mmol), N,N'-di-BOC-1H-pyrazole-1-carboxamidine (0.74 g, 2.4 mmol), and triethylamine (0.26 g, 2.6 mmol) were dissolved in dichloromethane (5 mL). The mixture was stirred at room temperature until the next day and then quenched with water. The organic phase was concentrated, and the residue was dissolved in ethyl acetate. The organic phase was washed with 10% hydrochloric acid, saturated aqueous sodium bicarbonate, and ion-exchanged water, and then concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired 4-(tert-butyl) 1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)((E)-N,N'-bis(tert-butoxycarbonyl)carbamimidoyl)aspartate (1.88 g, 2.0 mmol, 93%).
[0145] Step: Synthesis of 3-guanidino-4-(((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)oxy)-4-oxobutanoic acid (lipid (CEb)) [ka] 4-(tert-Butyl) 1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)((E)-N,N'-bis(tert-butoxycarbonyl)carbamimidoyl)aspartate (1.88 g, 2.0 mmol) was dissolved in trifluoroacetic acid (hereinafter also referred to as TFA) (5 mL). After stirring at room temperature for 1 hour, the solvent was concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / methanol) to obtain the target lipid (CEb) (0.66 g, 0.98 mmol, 61%).
[0146] 1 H-NMR (400 MHz, CHLOROFORM-D) δ 5.44-5.25 (m, 4H), 4.87 (t, J = 5.9 Hz, 1H), 3.48-3.31 (m, 1H), 3.20-3.16 (t, 1H), 2.09-1.86 (m, 8H),1.78-1.52 (m,4H), 1.38-1.18 (m, 46H), 0.87 (t, J = 6.9 Hz, 6H)
[0147] Comparative Example 3 Synthesis of 4-guanidino-5-(((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)oxy)-5-oxopentanoic acid (hereinafter also referred to as lipid (CEc)) [ka] Lipid (CEc) is a lipid in which the first amino acid of lipid (CEa) has been changed to a compound having a guanidino group. The synthesis method of lipid (CEc) is described below. Note that the step of synthesizing the lipophilic region and some of the subsequent steps in the synthesis process are the same as steps (a1) to (a5) and steps (b6) and (b7) of lipid (Ia), and therefore will be omitted.
[0148] Step: Synthesis of 5-(tert-butyl) 1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)((Z)-N,N'-bis(tert-butoxycarbonyl)carbamimidoyl)glutamate [ka] 5-(tert-butyl) 1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)glutamate (1.0 g, 1.4 mmol), N,N'-di-BOC-1H-pyrazole-1-carboxamidine (0.48 g, 1.6 mmol), and triethylamine (0.17 g, 1.7 mmol) were dissolved in dichloromethane (5 mL). The mixture was stirred at room temperature until the next day and then quenched with water. The organic phase was concentrated, and the residue was dissolved in ethyl acetate. The organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate water, and ion-exchanged water, and then concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired 5-(tert-butyl) 1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)((Z)-N,N'-bis(tert-butoxycarbonyl)carbamimidoyl)glutamate (1.34 g, 1.4 mmol, 100%).
[0149] Step: Synthesis of 4-guanidino-5-(((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)oxy)-5-oxopentanoic acid (lipid (CEc)) [ka] 5-(tert-Butyl) 1-((9Z,27Z)-hexatriaconta-9,27-dien-18-yl)((Z)-N,N'-bis(tert-butoxycarbonyl)carbamimidoyl)glutamate (1.34 g, 1.4 mmol) was dissolved in trifluoroacetic acid (hereinafter also referred to as TFA) (5 mL). After stirring at room temperature for 1 hour, the solvent was concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / methanol) to obtain the target lipid (CEc) (0.45 g, 0.67 mmol, 44%).
[0150] 1 H-NMR (400 MHz, CHLOROFORM-D) δ 5.44-5.25 (m, 4H), 4.87 (t, J = 5.9 Hz, 1H), 3.48-3.31 (m, 1H), 3.20-3.16 (m, 2H), 2.09-1.86 (m, 10H),1.78-1.52 (m,4H), 1.38-1.18 (m, 46H), 0.87 (t, J = 6.9 Hz, 6H)
[0151] Comparative Example 4 Synthesis of (9Z,27Z)-hexatriaconta-9,27-diene-18-yl lysinate (hereinafter also referred to as lipid (CEd)) [ka] Lipid (CEd) is a lipid in which the first amino acid of lipid (CEa) is changed to Lys. The synthesis method of lipid (CEd) is explained below. Note that the steps of synthesizing the lipophilic region in the synthesis process are the same as steps (a1) to (a5) of lipid (Ia), so they are omitted here.
[0152] Step (CEd1): Synthesis of (9Z,27Z)-hexatriaconta-9,27-dien-18-yl N2,N6-bis(((9H-fluoren-9-yl)methoxy)carbonyl)lysinate [ka] (9Z,27Z)-hexatriaconta-9,27-dien-18-ol (2.0 g, 3.9 mmol) obtained in step (a5) and N α ,N ε Fmoc-Lys(Fmoc)-OH (4.55 g, 7.7 mmol) and DCC (2.0 g, 7.7 mmol) were dissolved in dichloromethane (15 mL). After stirring at room temperature until the next day, the mixture was quenched with water, and the precipitated dicyclohexylurea was removed by filtration. The filtrate was concentrated, and the residue was dissolved in ethyl acetate. The organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate water, and ion-exchanged water, and then concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired (9Z,27Z)-hexatriaconta-9,27-dien-18-yl N2,N6-bis(((9H-fluoren-9-yl)methoxy)carbonyl)lysinate (3.8 g, 3.5 mmol, 90%).
[0153] Step (CEd2): Synthesis of (9Z,27Z)-hexatriaconta-9,27-diene-18-yl lysinate [ka] (9Z,27Z)-Hexatriaconta-9,27-dien-18-yl N2,N6-bis(((9H-fluoren-9-yl)methoxy)carbonyl)lysinate (3.5 g, 3.5 mmol) was dissolved in 20% piperidine / DMF solution (6 mL). After stirring at room temperature until the next day, the solvent was concentrated under reduced pressure. The residue was dispersed in ethyl acetate, and the precipitate was removed by filtration. The filtrate was dissolved in ethyl acetate, and the organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate water, and ion-exchanged water. The organic phase was then concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the target lipid (CEd) (1.5 g, 2.3 mmol, 72%).
[0154] 1H-NMR (400 MHz, CHLOROFORM-D) δ 5.44-5.25 (m, 4H), 4.87 (t, J = 5.9 Hz, 1H), 3.48-3.31 (m, 1H), 3.20-3.16 (t, 1H), 2.70-2.66 (t, 1H), 2.09-1.86 (m, 10H),1.78-1.52 (m,4H), 1.38-1.18 (m, 50H), 0.87 (t, J = 6.9 Hz, 6H)
[0155] Comparative Example 5 Synthesis of (6Z,14Z)-icosa-6,14-diene-10-yl lysinate (hereinafter also referred to as lipid (CEe)) [ka] Lipid (CEe) is a lipid in which the number of carbon atoms in the hydrocarbon group of the lipophilic region of lipid (CEd) has been changed. In the synthesis method of lipid (CEe), the step of synthesizing the lipophilic region during the synthesis process was carried out in the same manner as steps (a1) to (a5) of lipid (Ia). Furthermore, the step of adding the first amino acid to the lipophilic region was carried out in the same manner as steps (CEd1) and (CEd2) of lipid (CEd), thereby obtaining lipid (CEe).
[0156] 1 H-NMR (400 MHz, CHLOROFORM-D) δ 5.44-5.25 (m, 4H), 4.87 (t, J = 5.9 Hz, 1H), 3.48-3.31 (m, 1H), 3.20-3.16 (t, 1H), 2.70-2.66 (t, 1H), 2.09-1.86 (m, 24H), 1.38-1.18 (m, 8H), 0.87 (t, J = 6.9 Hz, 6H)
[0157] Comparative Example 6 Synthesis of (7Z,25Z)-dotriaconta-7,25-diene-16-yl lysinate (hereinafter also referred to as lipid (CEf)) [ka] Lipid (CEf) is a lipid in which the number of carbon atoms in the hydrocarbon group of the lipophilic region of lipid (CEd) has been changed. In the synthesis method of lipid (CEf), the step of synthesizing the lipophilic region during the synthesis process was carried out in the same manner as steps (a1) to (a5) of lipid (Ia). Furthermore, the step of adding the first amino acid to the lipophilic region was carried out in the same manner as steps (CEd1) and (CEd2) of lipid (CEd), thereby obtaining lipid (CEf).
[0158] 1 H-NMR (400 MHz, CHLOROFORM-D) δ 5.44-5.25 (m, 4H), 4.87 (t, J = 5.9 Hz, 1H), 3.48-3.31 (m, 1H), 3.20-3.16 (t, 1H), 2.70-2.66 (t, 1H), 2.09-1.86 (m, 8H), 1.54-1.66 (4H,),1.38-1.18 (m, 42H), 0.87 (t, J = 6.9 Hz, 6H)
[0159] Comparative Example 7 Synthesis of (9Z,35Z)-tetratetraconta-9,35-diene-22-yl lysinate (hereinafter also referred to as lipid (CEg)) [ka] Lipid (CEg) is a lipid in which the number of carbon atoms in the hydrocarbon group of the lipophilic region of lipid (CEd) has been changed. In the synthesis method of lipid (CEg), the step of synthesizing the lipophilic region during the synthesis process was carried out in the same manner as steps (a1) to (a5) of lipid (Ia). Furthermore, the step of adding the first amino acid to the lipophilic region was carried out in the same manner as steps (CEd1) and (CEd2) of lipid (CEd), thereby obtaining lipid (CEg).
[0160] 1H-NMR (400 MHz, CHLOROFORM-D) δ 5.44-5.25 (m, 4H), 4.87 (t, J = 5.9 Hz, 1H), 3.48-3.31 (m, 1H), 3.20-3.16 (t, 1H), 2.70-2.66 (t, 1H), 2.09-1.86 (m, 10H), 1.54-1.66 (4H,),1.38-1.18 (m, 58H), 0.87 (t, J = 6.9 Hz, 6H)
[0161] [Comparative Example 8] Synthesis of (3Z,15Z)-docosa-3,15-dien-7-yl lysinate (hereinafter also referred to as lipid (CEh)) [ka] Lipid (CEh) is a lipid in which the number of carbon atoms in the hydrocarbon group of the lipophilic region of lipid (CEd) has been changed. In the method for synthesizing lipid (CEh), the steps of synthesizing the lipophilic region were carried out in the same manner as steps (a1) to (a5) of lipid (Ia). Furthermore, the steps of adding the first amino acid to the lipophilic region were carried out in the same manner as steps (CEd1) and (CEd2) of lipid (CEd), thereby obtaining lipid (CEh).
[0162] 1 H-NMR (400 MHz, CHLOROFORM-D) δ 5.44-5.25 (m, 4H), 4.87 (t, J = 5.9 Hz, 1H), 3.48-3.31 (m, 1H), 3.20-3.16 (t, 1H), 2.70-2.66 (t, 1H), 2.09-1.86 (m, 8H), 1.54-1.66 (6H),1.38-1.18 (m, 22H), 1.09 (3H, t, J = 7.5 Hz), 0.87 (t, J = 6.9 Hz, 3H)
[0163] Comparative Example 9 Synthesis of (3Z,19Z)-octacosa-3,19-dien-7-yl lysinate (hereinafter also referred to as lipid (CEi)) [ka] Lipid (CEi) is a lipid in which the number of carbon atoms in the hydrocarbon group of the lipophilic region of lipid (CEd) has been changed. In the method for synthesizing lipid (CEi), the steps of synthesizing the lipophilic region were carried out in the same manner as steps (a1) to (a5) of lipid (Ia). Furthermore, the steps of adding the first amino acid to the lipophilic region were carried out in the same manner as steps (CEd1) and (CEd2) of lipid (CEd), thereby obtaining lipid (CEi).
[0164] 1 H-NMR (400 MHz, CHLOROFORM-D) δ 5.44-5.25 (m, 4H), 4.87 (t, J = 5.9 Hz, 1H), 3.48-3.31 (m, 1H), 3.20-3.16 (t, 1H), 2.70-2.66 (t, 1H), 2.09-1.86 (m, 14H), 1.54-1.66 (14H),1.38-1.18 (m, 30H), 1.09 (3H, t, J = 7.5 Hz), 0.87 (t, J = 6.9 Hz, 3H)
[0165] [Comparative Example 10] Synthesis of 3-(2-amino-5-guanidinopentanamide)-4-(2,3-bis(((Z)-heptadeca-8-enoyl)oxy)propoxy)-4-oxobutanoic acid (hereinafter also referred to as lipid (CEj)) [ka] Lipid (CEj) is a lipid in which the hydrocarbon group in the lipophilic region of lipid (Ia) has been modified. The synthesis method of lipid (CEj) is described below.
[0166] [ka] (2,2-Dimethyl-1,3-dioxolan-4-yl)methanol (5.0 g, 37.8 mmol) was dissolved in DMF (250 mL) and cooled to 0 °C. Sodium hydride (1.2 g, 50.3 mmol) was added to the solution. The mixture was stirred at room temperature until the next day, cooled to 0 °C, and 4-methoxybenzyl chloride (7.1 g, 45.4 mmol) was added dropwise. After stirring at room temperature for 1 hour, the mixture was quenched with water and extracted with heptane. The organic phase was washed with ion-exchanged water and then concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to give the desired 4-(((4-methoxybenzyl)oxy)methyl)-2,2-dimethyl-1,3-dioxolane (8.6 g, 34.1 mmol, 90%).
[0167] [ka] 4-(((4-Methoxybenzyl)oxy)methyl)-2,2-dimethyl-1,3-dioxolane (8.6 g, 34.1 mmol) was dissolved in water (40 mL) and acetic acid (160 mL), and the mixture was heated to 50°C and reacted for 1 hour. After the reaction was completed, the mixture was concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired 3-((4-methoxybenzyl)oxy)propane-1,2-diol (6.4 g, 30.0 mmol, 88%).
[0168] [ka] 3-((4-Methoxybenzyl)oxy)propane-1,2-diol (6.4 g, 30.0 mmol), oleic acid (10.2 g, 36.0 mmol), DCC (7.4 g, 36.0 mmol), and DMAP (0.37 g, 3.0 mmol) were dissolved in dichloromethane (30 mL). After stirring at room temperature until the next day, the mixture was quenched with water and the precipitated dicyclohexylurea was removed by filtration. The filtrate was concentrated, the residue was dissolved in ethyl acetate, and the organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate solution, and ion-exchanged water. The organic phase was then concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired 3-((4-methoxybenzyl)oxy)propane-1,2-diyl dioleate (10.2 g, 13.8 mmol, 46%).
[0169] [ka] 3-((4-Methoxybenzyl)oxy)propane-1,2-diyl dioleate (10.2 g, 13.8 mmol) was dissolved in ethyl acetate (120 mL) and water (12 mL), and 2,3-dichloro-5,6-dicyano-p-benzoquinone (DDQ) (6.0 g, 49.2 mmol) was added. The mixture was stirred at room temperature until the next day. After the reaction was completed, the crystals were removed by filtration, and the filtrate was concentrated. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired 3-hydroxypropane-1,2-diyl dioleate (6.5 g, 10.5 mmol, 76%).
[0170] [ka] 3-Hydroxypropane-1,2-diyl dioleate (2.0 g, 3.2 mmol), Fmoc-Asp(tBu)-OH (1.59 g, 3.8 mmol), in which the amino and carbonyl groups of aspartic acid had been protected with Fmoc and tBu groups, respectively, DCC (1.33 g, 6.4 mmol), and DMAP (0.2 g, 1.6 mmol) were dissolved in dichloromethane (30 mL). After stirring at room temperature until the next day, the mixture was quenched with water, and the precipitated dicyclohexylurea was removed by filtration. The filtrate was concentrated, the residue was dissolved in ethyl acetate, and the organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate solution, and ion-exchanged water, and then concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired 1-(2,3-bis(oleoyloxy)propyl)4-(tert-butyl)(((9H-fluoren-9-yl)methoxy)carbonyl)aspartic acid (3.1 g, 3.0 mmol, 95%).
[0171] [ka] 1-(2,3-Bis(oleoyloxy)propyl)4-(tert-butyl)(((9H-fluoren-9-yl)methoxy)carbonyl)aspartic acid (3.1 g, 3.0 mmol) was dissolved in a 20% piperidine / DMF solution (6 mL). After stirring at room temperature until the next day, the solvent was concentrated under reduced pressure. The residue was dispersed in ethyl acetate, and the precipitate was removed by filtration. The filtrate was dissolved in ethyl acetate, and the organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate water, and ion-exchanged water, and then the organic phase was concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired 1-(2,3-bis(oleoyloxy)propyl)4-(tert-butyl)aspartic acid (1.75 g, 2.2 mmol, 72%).
[0172] [ka] 1-(2,3-Bis(oleoyloxy)propyl)4-(tert-butyl)aspartic acid (1.75 g, 2.2 mmol), Boc-Arg(Boc)2-OH (1.72 g, 2.6 mmol), which had been previously prepared by adding protecting groups (Boc groups) to the amino and guanidino groups of arginine, DCC (0.55 g, 2.6 mmol), and DMAP (27 mg, 0.22 mmol) were dissolved in dichloromethane (13 mL). After stirring at room temperature until the next day, the mixture was quenched with water, and the precipitated dicyclohexylurea was removed by filtration. The filtrate was concentrated, the residue was dissolved in ethyl acetate, and the organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate solution, and ion-exchanged water, and then concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired 1-(2,3-bis(oleoyloxy)propyl)4-(tert-butyl)N2,Nw,Nw'-tris(tert-butoxycarbonyl)arginyl aspartate (1.6 g, 1.2 mmol, 58%).
[0173] [ka] 1-(2,3-bis(oleoyloxy)propyl) 4-(tert-butyl)N2,Nw,Nw'-tris(tert-butoxycarbonyl)arginyl aspartate (1.6 g, 1.2 mmol) was dissolved in TFA (4 mL). After stirring at room temperature for 1 hour, the solvent was concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / methanol) to obtain the desired 1-(2,3-bis(oleoyloxy)propyl) 4-(tert-butyl)arginyl aspartate (0.30 g, 0.33 mmol, 26%).
[0174] 1H-NMR (400MHz, CHLOROFORM-D) δ5.32 (m, 4H), 5.30-5.18(m,1H), 4.90-4.75 (m, 1H), 4.35-4.05(m, 4H), 3.15-3.02 (4H), 2.95-2.20 (m, 4H), 2.12-1.81 (m, 10H), 1.65-1.42 (m, 12H), 1.35-0.98 (m, 28H), 0.86 (t, 6H)
[0175] [Comparative Example 11] Synthesis of 3-(2-amino-5-guanidinopentanamide)-4-((2,3-bis(((Z)-heptadeca-8-enoyl)oxy)propyl)amino)-4-oxobutanoic acid (hereinafter also referred to as lipid (CEk)) [ka] Lipid (CEk) is a lipid in which the hydrocarbon group in the lipophilic region of lipid (Ia) has been modified. A method for synthesizing lipid (CEk) is described below.
[0176] [ka] Fmoc-Asp(tBu)-OH (3.4 g, 8.3 mmol), DCC (2.3 g, 10.8 mmol), and DMAP (0.10 g, 8.3 mmol) were dissolved in dichloromethane (105 mL), and the mixture was stirred at room temperature for 2 hours. 3-Amino-1,2-propanediol (4.0 g, 7.7 mmol) dissolved in DMF (55 mL) was added to this solution, and the mixture was stirred at room temperature until the next day. After quenching with water, the precipitated dicyclohexylurea was removed by filtration. The filtrate was concentrated, and the residue was dissolved in ethyl acetate. The organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate solution, and ion-exchanged water, and then concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired tert-butyl 3-((((9H-fluoren-9-yl)methoxy)carbonyl)amino)-4-((2,3-dihydroxypropyl)amino)-4-oxobutanoate (3.5 g, 7.2 mmol, 87%).
[0177] [ka] tert-Butyl 3-((((9H-fluoren-9-yl)methoxy)carbonyl)amino)-4-((2,3-dihydroxypropyl)amino)-4-oxobutanoate (3.5 g, 7.5 mmol), oleic acid (4.47 g, 15.8 mmol), DCC (3.89 g, 18.8 mmol), and DMAP (0.09 g, 0.8 mmol) were dissolved in dichloromethane (30 mL). After stirring at room temperature until the next day, the mixture was quenched with water and the precipitated dicyclohexylurea was removed by filtration. The filtrate was concentrated, and the residue was dissolved in ethyl acetate. The organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate water, and ion-exchanged water, and then concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired 3-(2-((((9H-fluoren-9-yl)methoxy)carbonyl)amino)-4-(tert-butoxy)-4-oxobutanamido)propane-1,2-diyl dioleate (3.4 g, 3.4 mmol, 45%).
[0178] [ka] 3-(2-((((9H-Fluoren-9-yl)methoxy)carbonyl)amino)-4-(tert-butoxy)-4-oxobutanamido)propane-1,2-diyl dioleate (3.5 g, 3.5 mmol) was dissolved in 20% piperidine / DMF solution (6 mL). After stirring at room temperature until the next day, the solvent was concentrated under reduced pressure. The residue was dispersed in ethyl acetate, and the precipitate was removed by filtration. The filtrate was dissolved in ethyl acetate, and the organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate water, and ion-exchanged water. The organic phase was then concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired 3-(2-amino-4-(tert-butoxy)-4-oxobutanamido)propane-1,2-diyl dioleate (3.2 g, 3.2 mmol, 91%).
[0179] [ka] 3-(2-amino-4-(tert-butoxy)-4-oxobutanamido)propane-1,2-diyl dioleate (1.0 g, 1.3 mmol), Fmoc-Arg(Pbf)-OH (0.9 g, 1.4 mmol) (TCI), DCC (0.31 g, 1.5 mmol), and DMAP (0.03 g, 0.3 mmol) were dissolved in dichloromethane (13 mL). After stirring at room temperature until the next day, the mixture was quenched with water, and the precipitated dicyclohexylurea was removed by filtration. The filtrate was concentrated, and the residue was dissolved in ethyl acetate. The organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate water, and ion-exchanged water, and then concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired compound, 8-(2-(tert-butoxy)-2-oxoethyl)-1-(9H-fluoren-9-yl)-3,6,9-trioxo-5-(3-(3-((2,2,4,6,7-pentamethyl-2,3-dihydrobenzofuran-5-yl)sulfonyl)granidino)propyl)-2-oxa-4,7,10-triazatridecane-12,13-diol diurea (1.68 g, 1.2 mmol, 93%).
[0180] [ka] 8-(2-(tert-butoxy)-2-oxoethyl)-1-(9H-fluoren-9-yl)-3,6,9-trioxo-5-(3-(3-((2,2,4,6,7-pentamethyl-2,3-dihydrobenzofuran-5-yl)sulfonyl)granidino)propyl)-2-oxa-4,7,10-triazatridecane-12,13-diol diureate (1.68 g, 1.2 mmol) was dissolved in a 20% piperidine / DMF solution (6 mL). After stirring at room temperature until the next day, the solvent was concentrated under reduced pressure. The residue was dispersed in ethyl acetate, and the precipitate was removed by filtration. The filtrate was dissolved in ethyl acetate, and the organic phase was washed with 10% hydrochloric acid, saturated sodium bicarbonate water, and ion-exchanged water, and then concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / heptane) to obtain the desired 3-(2-(2-amino-5-(3-((2,2,4,6,7-pentamethyl-2,3-dihydrobenzofuran-5-yl)sulfonyl)guanidino)pentanamido)-4-(tert-butoxy)-4-oxobutanamido)propane-1,2-diethyl diolein (1.2 g, 1.0 mmol, 85%).
[0181] [ka] 3-(2-(2-amino-5-(3-((2,2,4,6,7-pentamethyl-2,3-dihydrobenzofuran-5-yl)sulfonyl)guanidino)pentanamido)-4-(tert-butoxy)-4-oxobutanamido)propane-1,2-diethyl diolein (1.2 g, 1.0 mmol) was dissolved in TFA (4 mL). After stirring at room temperature for 1 hour, the solvent was concentrated under reduced pressure. The resulting crude product was purified by silica gel column chromatography (ethyl acetate / methanol) to obtain the target lipid (CEk) (0.24 g, 0.27 mmol, 27%).
[0182] 1H-NMR (400 MHz, CHLOROFORM-D) δ 5.34 (d, J = 17.4 Hz, 4H), 5.08 (s, 1H), 4.94-4.64 (1H), 4.21 (s, 1H), 4.02 (s, 1H), 3.39 (s, 1H), 3.01 (s, 1H), 2.43-2.14 (m, 4H), 1.99 -1.70 (m,10H), 1.55 (s, 5H), 1.26 (m, 46H), 0.86 (t, J = 6.6 Hz, 6H)
[0183] [Comparative Example 12] Synthesis of (9Z,27Z)-hexatriaconta-9,27-dien-18-ylmethioninate (hereinafter also referred to as lipid (CEl)) [ka] Lipid (CEl) is a lipid in which the first amino acid of lipid (CEa) is changed to Met. The synthesis method for lipid (CEl) was the same as steps (a1) to (a5) for lipid (Ia) for synthesizing the lipophilic region, and the binding of the first amino acid to the lipophilic region was performed in the same manner as steps (f6) and (f7) for lipid (If).
[0184] 1 H-NMR (400 MHz, CHLOROFORM-D) δ 5.44-5.25 (m, 4H), 4.87 (t, J = 5.9 Hz, 1H), 3.48-3.31 (m, 1H), 3.20-3.16 (t, 1H), 2.70-2.66 (t, 1H),2.19(s,3H), 2.09-1.86 (m, 10H),1.78-1.52 (m,4H), 1.38-1.18 (m, 46H), 0.87 (t, J = 6.9 Hz, 6H)
[0185] [Reference example 1] Lipid (r1) (Cayman Chemical, SM102-33474) was used as a reference lipid for comparison of each evaluation. [ka]
[0186] <Evaluation> Next, compositions containing lipid nanoparticles encapsulating siRNA and mRNA were prepared using the lipids of the above examples and comparative examples, and each was evaluated.
[0187] [Preparation of lipid nanoparticles (LNP)] A. Preparation of lipid solution and citrate buffer First, lipid solutions were prepared using the lipids of the Examples and Comparative Examples according to the following procedure. (i) An ethanol solution of a specific lipid (10 mM, hereinafter also referred to as the main lipid) of the examples and comparative examples, an ethanol solution of a helper lipid (DPPC (dipalmitoylphosphatidylcholine): 10 mM) different from the main lipid, and an ethanol solution of cholesterol (10 mM) were prepared. (ii) The solutions prepared in (i) above were mixed so that the molar ratio of main lipid / helper lipid / cholesterol was 45 / 10 / 45 to obtain a lipid solution.
[0188] Next, a citrate buffer was prepared. Specifically, 50 mL of a 1 mM citric acid solution and 50 mL of a 1 mM sodium citrate solution were prepared. The citric acid solution and the sodium citrate solution were mixed while checking the pH with a pH meter to prepare a 1 mM citrate buffer with a pH of 4.5.
[0189] B. Lipid Nanoparticle Preparation Next, lipid nanoparticles were prepared using a microchannel. The microchannel method uses a microreactor to mix a lipid solution with an siRNA solution or an mRNA solution to prepare lipid nanoparticles. The siRNA solution used was a solution of 21 base pairs of siRNA dissolved in RNase-free water (RFW), and the mRNA solution used was CleanCap FLuc mRNA (product number L-7602-100) from TriLink BioTechnologies. First, the procedure for preparing siRNA-containing lipid nanoparticles will be described below. (i) The lipid solution, the 1 mM citrate buffer, and ethanol for washing were kept warm in an incubator set at 25°C. (ii) The microchannel (YMC, KC-MS-SUS) was washed by flowing ethanol on the lipid solution side and RFW on the siRNA solution side. (iii) The required amount of 1 mM citrate buffer and the siRNA solution were mixed to prepare an siRNA citrate buffer solution. (iv) 0.33 mL of lipid solution and 1.66 mL of siRNA citrate buffer solution were placed in separate syringes and attached to their respective pumps. The lipid solution and siRNA citrate buffer solution were set to a total flow rate of 3.3 mL / min, a total lipid to siRNA molar ratio of 7000:1, a lipid concentration of 1.7 mM, and a solvent ratio (alcohol concentration) of 24.1%. (v) The device was started, and the lipid solution and siRNA citrate buffer solution were vigorously mixed in the channel. The first 750 μL was discarded, and the remaining solution was collected in an Eppendorf tube.
[0190] Next, the procedure for producing lipid nanoparticles containing mRNA will be described below. (i) The lipid solution and the 1 mM citrate buffer were kept warm in an incubator set at 25°C. (ii) The microchannel (YMC, KC-MS-SUS) was washed by flowing ethanol of the lipid solution on the lipid solution side and RFW on the mRNA solution side. (iii) The mRNA citrate buffer solution was prepared by mixing the required amount of 1 mM citrate buffer with the mRNA solution. The 1 mM citrate buffer used here was adjusted to pH 4.5 using acidic 1 mM citrate buffer. (iv) 0.522 mL of lipid solution and 1.478 mL of mRNA citrate buffer solution were placed in separate syringes and attached to the respective pumps. The amounts of lipid solution and mRNA citrate buffer solution were adjusted so that the lipid to mRNA weight ratio was 30:1. (v) The flow rate of the lipid solution was set to 685.7 μL / min and that of the mRNA citrate buffer solution to 2.914 mL / min. The device was started, and the lipid solution and mRNA citrate buffer solution were vigorously mixed in the flow channel. The first 13.75 seconds were discarded, and the remaining solution was collected in an Eppendorf tube.
[0191] The method for producing lipid nanoparticles containing mRNA using the lipid (r1) of Reference Example 1 will be described below. Lipid nanoparticles containing mRNA were prepared using lipid (r1) in the same manner as in the preparation of lipid nanoparticles containing mRNA using the lipids of each example, except for the following changes. Lipid solutions were prepared as follows: (i) An ethanol solution of lipid (r1) (10 mM), an ethanol solution of helper lipid (DSPC (1,2-distearoyl-sn-glycero-3-phosphocholine): 10 mM), an ethanol solution of cholesterol (10 mM), and an ethanol solution of PEG2000-DMG (10 mM) were prepared. (ii) The solutions prepared in (i) above were mixed in a molar ratio of main lipid / helper lipid / cholesterol / PEG2000-DMG = 50 / 10 / 38.5 / 1.5 to obtain a lipid solution. Next, the method for preparing lipid nanoparticles containing mRNA was the same as the method for preparing lipid nanoparticles containing mRNA using the lipids of each example, except that (iv) the amounts of lipid solution and mRNA citrate buffer solution were adjusted so that the weight ratio of lipid (r1) to mRNA was 19.35:1.
[0192] Next, the lipid nanoparticle-containing solution containing siRNA or mRNA obtained as described above was dialyzed using a dialysis membrane (Spectra / Por 2 Membrane, manufactured by REPLIGEN) to remove organic solvents such as ethanol and salts contained in the buffer. The procedure is as follows. (i) The dialysis membrane was cut to the required length and activated by immersing it in water. (ii) The activated dialysis membrane was drained, and the bottom was fastened with a clip to prevent leakage of the lipid nanoparticle-containing solution from below. (iii) The lipid nanoparticle-containing solution was poured into the dialysis membrane using a pipette, and after the solution was poured, the top was fastened with a clip. (iv) The mixture was placed in a container (such as a beaker) filled with a large amount of water and stirred with a stirrer at a speed that allowed the dialysis membrane to rotate gently. The mixture was stirred overnight, changing the water several times during the stirring. (v) After dialysis, the dialysis membrane was removed from the water, opened using scissors, and the contents were transferred to another container while measuring with a pipette.
[0193] [Measurement of particle size, polydispersity index, and zeta potential of lipid nanoparticles] 30 μL of the lipid nanoparticle-containing solution after dialysis obtained by the above procedure was measured and diluted with 800 μL of ultrapure water. The particle size (nm) and polydispersity index (PDI) were measured using a Zetasizer (Malvern Panalytical, Zetasizer nano Ultra). Particle size was evaluated by Z-average in ultrapure water. Zeta potential was also measured using pH 7.4 Tris-HCl as the diluted solution.
[0194] [Evaluation of siRNA and mRNA encapsulation rates in lipid nanoparticles] The siRNA and mRNA encapsulation rates of lipid nanoparticles were determined as follows. First, a surfactant (Sigma-Aldrich, Triton®, X-100 (reduced)) was added to the lipid nanoparticle-containing solution to disrupt the lipid nanoparticles and release the encapsulated siRNA or mRNA. The amounts of the lipid nanoparticle-containing solution and surfactant were adjusted so that 2 pmol of siRNA or mRNA and 1% surfactant were present in 40 μL of the lipid nanoparticle-containing solution. Next, RiboGreen reagent (a reagent that reacts with siRNA to emit fluorescence; Thermo Fisher Scientific, Quant-iT® RiboGreen® RNA Assay Kit) was added to the solution, and the fluorescence intensity was measured using a fluorometer (TECAN, Infinite M200) at an excitation wavelength of 480 nm and an emission wavelength of 520 nm. Specifically, 10 μL of the solution was diluted with 65 μL of citrate buffer, and 75 μL of a 1:2000 diluted RiboGreen reagent was added to the diluted solution, and the fluorescence intensity was measured. This allows the relative amount of total siRNA or mRNA present in the solution to be measured. Next, RiboGreen reagent was added to the lipid nanoparticle-containing solution without adding a surfactant, and the fluorescence intensity was similarly measured using a fluorometer. By not adding a surfactant, the amount of siRNA or mRNA that was free in the solution and not encapsulated in lipid nanoparticles could be measured relatively. The fluorescence intensity obtained from the solution containing the surfactant obtained as described above was designated as fluorescence intensity a, and the fluorescence intensity obtained from the solution containing the surfactant was designated as fluorescence intensity b. The siRNA encapsulation rate (%) or mRNA encapsulation rate (%) of the lipid nanoparticles was calculated using the formula (ab) / a × 100. Note that each fluorescence intensity a and b is the arithmetic mean value of the results of three measurements performed for each solution minus the blank. Note that the blank was measured by performing the same procedure on wells containing water without cells or lipid nanoparticles.
[0195] [Cell experiment 1] To evaluate the siRNA-encapsulated lipid nanoparticles prepared using the lipids of each example and comparative example, cell experiments were performed using HT1080-EGFP (human fibrosarcoma) cells. These cells were harboring the green fluorescent protein gene (EGFP). Since EGFP expression can be easily confirmed by measuring the fluorescence intensity of a solution containing dissolved cells, the performance of the lipid nanoparticles used can be evaluated by applying lipid nanoparticles encapsulating siRNA that suppresses EGFP expression and observing the decrease in fluorescence intensity. The procedure for the cell experiments is described below.
[0196] A. Cell Preparation (i) Liquid medium (DMEM / Ham's F12, FBS+, P / S+) (FBS: fetal bovine serum, P / S: antibiotics) was removed from the refrigerator and the temperature was adjusted in an incubator set to 37°C. (ii) The cryotube containing the cells was removed from the -80°C freezer and quickly thawed in an incubator set to 37°C. (iii) The thawed cell stock solution was collected in a capped test tube. (iv) The tube containing the cells was washed with liquid medium, and the washings were also collected in a test tube. (v) The test tube was centrifuged to pellet the cells. (vi) The supernatant was aspirated, and liquid medium was added and gently tapped to disperse the cells. (vii) A small amount of the dispersed liquid medium was collected, and the number of cells was observed and counted under a microscope. (viii) 2 × 10 cells per well in a 24-well plate. 4 The cells were seeded at a density of 4 × 10 cells per well in a 96-well plate for the LDH assay described below. 3 The cells were seeded to give a cell count of . (ix) The 24-well plate or 96-well plate was placed in an incubator, and the cells were cultured at 37°C and 5% CO2 for 24 hours.
[0197] B. Transfection The prepared lipid nanoparticles were introduced into cells. (i) To the liquid medium (FBS-, P / S-) whose temperature had been adjusted in the same manner as in (i) of A above, fetal bovine serum (FBS) was added to a concentration of 10%. (ii) The 24-well plate was removed from the incubator, and the liquid medium supernatant in the 24-well plate was aspirated and washed with phosphate buffered saline (PBS). (iii) 400 μL of the liquid medium prepared in (i) above was added to a washed 24-well plate, and 100 μL of the LNP solution with the adjusted concentration was also added. (iv) The 24-well plate was placed in an incubator and the cells were cultured (24 hours). (v) After 24 hours, the liquid medium supernatant in the 24-well plate was aspirated, and 500 μL of liquid medium containing 10% FBS (FBS+ / P / S+) was added. (vi) The 24-well plate was placed in an incubator, and the cells were cultured for 24 hours under conditions of 37°C and 5% CO2.
[0198] The lipid nanoparticles were introduced into cells for the LDH assay described below as follows. (i) The 96-well plate was removed from the incubator. (ii) The liquid culture supernatant in the 96-well plate was aspirated and washed with phosphate buffered saline (PBS). (iii) 160 μL of liquid medium containing 10% FBS (FBS+ / P / S+) was added to a washed 96-well plate, and 40 μL of the adjusted LNP solution was added. (iv) The 96-well plate was placed in an incubator, and the cells were cultured at 37°C and 5% CO2 for 24 hours.
[0199] C. Toxicity Assessment (CCK-8 Assay, LDH Assay) For Examples 1 to 9, the metabolic activity of living cells was measured by CCK-8 assay or LDH assay, and the relative number of surviving cells was quantified to evaluate the toxicity of the lipid nanoparticles. (a) CCK-8 assay (i) To the liquid medium (FBS-, P / S-) adjusted to the same temperature as in (i) of A above, FBS was added to 10% and a viable cell count kit (Dojindo Laboratories, Cell Count Kit-8) to 10%. (ii) The 24-well plate was removed from the incubator. The liquid medium was removed, and 315 μL of the liquid medium containing the viable cell count kit prepared in (i) above was added. (iii) Aged in an incubator for 1 hour. (iv) The 24-well plate was removed and the absorbance was measured using a plate reader (TECAN, Infinite M200) at a measurement wavelength of 450 nm and a target wavelength of 630 nm. The absorbance was calculated based on the absorbance of control cells without lipid nanoparticles, which was set at 1.00. The obtained values were evaluated as follows: 0.80 to 1.00 = ◎ (excellent); 0.50 to 0.80 = ○ (good); 0.20 to 0.50 = △ (passable); and less than 0.20 = × (unacceptable).
[0200] (b) LDH assay The LDH assay was carried out using a cell count measurement kit (Dojindo Laboratories, Cytotoxicity LDH Assay Kit-WST) as follows. (i) 20 μL of lysis buffer was added to the positive control well, and the wells were incubated at 37° C. for 30 minutes in an incubator. (ii) 100 μL of the supernatant was taken from each well and transferred to a 96-well plate for measurement. (iii) 100 μL of the reagent mixture included in the kit was added to all wells, and a color reaction was carried out at room temperature for 30 minutes in the dark. (iv) 50 μL of the stop solution reagent included in the kit was added to all wells. (v) The 96-well plate was measured using a plate reader (TECAN, Infinite M200) at a measurement wavelength of 490 nm and a target wavelength of 630 nm, and the absorbance was calculated. The absorbance was calculated based on the absorbance of the control cells without lipid nanoparticles added, which was set at 1.00. The obtained value was evaluated as follows: 0.5 or less = ◎ (excellent), 0.5 or more but 1.0 or less = ○ (good), 1.0 or more but less than 6.0 = △ (passable), and 6.0 or more = × (unacceptable).
[0201] D. Evaluation of knockdown effect (GFP assay) A GFP assay was performed to measure the amount of EGFP expression in the cells and evaluate the knockdown effect of the green fluorescent protein gene (EGFP) by lipid nanoparticles. (i) The 24-well plate was removed from the incubator and washed with PBS. (ii) To disrupt the cells, 1% octyl glucoside solution containing protease inhibitors was added, and the cells were lysed by stirring with a pipette. (iii) The cell lysate was transferred to an Eppendorf tube and centrifuged. (iv) 150 μL of the supernatant was collected and added to a plate for fluorescence measurement. (v) Fluorescence intensity was measured using a plate reader (TECAN, Infinite M200) at an excitation wavelength of 485 nm and an emission wavelength of 535 nm. The fluorescence intensity was calculated based on the fluorescence intensity of control cells without lipid nanoparticles added, which was set at 100%.
[0202] [Cell experiment 2] For the lipids (Ia), (Ib), and (Ie) in Examples 1, 2, and 5, cell experiments were performed using HEK293T cells and NIH3T3 cells to evaluate the lipid nanoparticles encapsulating mRNA. The performance of the lipid nanoparticles used can be evaluated by transfecting the cells with the lipid nanoparticles and measuring the amount of a specific protein produced. The procedure for the cell experiment is described below.
[0203] A. Cell seeding (i) The liquid medium (DMEM High glucose, FBS+, P / S+) was kept at 37°C in an incubator. (ii) The cryotube containing the cells was removed from the -80°C freezer and quickly thawed in an incubator set to 37°C. (iii) The test tube was centrifuged to pellet the cells. (iv) The supernatant was aspirated, and liquid medium was added and gently tapped to disperse the cells. (v) A small amount of the dispersed liquid medium was collected, and the number of cells was observed and counted under a microscope. (vi) Three 24-well black plates, 1 × 10 per well 4 The cells were seeded at a cell number of 1 / µL. The 24-well black plate was placed in an incubator, and the cells were cultured at 37°C and 5% CO for 24 hours.
[0204] B. Transfection (i) A solution containing lipid nanoparticles containing mRNA was concentrated so that the mRNA concentration was 100 ng / 20 μL (=0.005 μg / μL). (ii) Liquid medium (DMEM High glucose, FBS-, P / S-) and FBS were warmed to 37°C, and the required amount of liquid medium and FBS were mixed (FBS concentration in the liquid medium at this time: 12.5%). The prepared liquid medium was sterilized by filtration through a 0.22 μm filter. (iii) The liquid medium supernatant in the 24-well black plate in which the cells had been cultured was aspirated, and 80 μL of the prepared liquid medium was added per well. (iv) RFW and the lipid nanoparticle-containing solution prepared to the above concentration were added in an amount of 20 μL per well. (v) The 24-well black plate was placed in an incubator, and the cells were cultured at 37°C and 5% CO2 for 24 hours.
[0205] C. Evaluation of protein expression effects (detection of Gaussia luciferase (GLuc)) The protein expression effect was evaluated using a Gaussia luciferase assay kit manufactured by Thermo Scientific. (i) The cells cultured in B.(v) above were removed from the incubator and allowed to stand at room temperature. (ii) 20 μL of the supernatant in the plate was collected and added to a new 96-well white plate. (iii) The 100X Coelenterazine and Gaussia Glow Assay Buffer included in the kit were brought to room temperature and mixed at a ratio of 1:100. The resulting solution was added to the supernatant at 50 μL per well using a multiple-channel pipette. (iv) The plate was shielded from light with aluminum foil and allowed to stand for 10 minutes. The amount of luminescence was then measured using a plate reader (TECAN, Infinite M200) (measurement time: 2 seconds), and the amount of protein expression was calculated using the obtained amount of luminescence as an index.
[0206] D. Toxicity Assessment (CellTiter-Fluor® Cell Viability Assay) (i) The CellTiter-Fluor® Cell Viability (CTF) assay reagents were completely thawed in a 37°C water bath. (ii) The GF-AFC Substrate was mixed uniformly using a vortex mixer. (iii) The required amounts of the buffer and GF-AFC Substrate included in the CTF assay reagent (kit) were mixed at a mixing ratio of 10 mL:10 μL, respectively. (iv) The mixed CTF reagent mixture was added at 100 μL per well to a 24-well black plate containing the cells cultured in B.(v) above, and the plate was immediately shielded from light with aluminum foil and then shaken on a plate shaker for 30 seconds. (v) The plate was placed in an incubator, and the 24-well black plate was placed in the incubator, where cells were cultured for 30 minutes under conditions of 37°C and 5% CO2. (vi) Fluorescence intensity was measured using a plate reader (excitation wavelength 380 nm, fluorescence wavelength 505 nm). From the measurement results obtained, the number of surviving cells was calculated, with the fluorescence intensity of cells without lipid nanoparticles set at 1. The number of surviving cells was evaluated as follows: 0.8 or more and 1.00 or less: ◎ (excellent); 0.50 or more and 0.80 or less: ○ (good); 0.20 or more and 0.50 or less: △ (passable); and 0.20 or less: × (unacceptable).
[0207] [In vivo animal experiments] Experiments were conducted using mice to evaluate lipid nanoparticles encapsulating mRNA. Mice were transfected by injecting a solution containing lipid nanoparticles, and the performance of the lipid nanoparticles used could be evaluated by measuring the amount of a specific protein produced. The experimental procedure is as follows:
[0208] A. Preparation of lipid nanoparticle-containing solution Lipid nanoparticle-containing solutions for in vivo animal experiments were prepared using the lipids (Ib), (Ik), and (Il) of Examples 2, 11, and 12. In (ii) of the lipid solution preparation method described in the above [Preparation of lipid nanoparticles (LNPs)], the lipid solutions were mixed so that the main lipid / helper lipid / cholesterol ratio was 45 / 10 / 45, and polyethylene glycol-modified lipid (PEG2000-DMG) was added to the mixture to a concentration of 1.5 mol%. The lipid nanoparticle-containing solution was prepared in the same manner as in the above [Preparation of lipid nanoparticles (LNPs)]. Furthermore, for comparison, a lipid nanoparticle-containing solution prepared from the lipid (Ib) of Example 2 without adding polyethylene glycol-modified lipid was also used in an in vivo animal experiment.
[0209] B. Preparation of Dosing Solutions The lipid nanoparticle-containing solution formed from the lipids (Ib), (Ik), and (Il) of Examples 2, 11, and 12 was concentrated (6,000 x g) to the target concentration (0.03125 μg / μL as mRNA) using a centrifugal ultrafiltration filter unit (Amicon Ultra-2, 10k). Next, 1.5 M sucrose solution was added to the concentrated lipid nanoparticle-containing solution so that the final sucrose concentration was 0.3 M to obtain a solution for administration.
[0210] C. Administration and Measurement 50 μL of the administration solution (1.25 μg of mRNA per mouse) was administered intramuscularly to the left hind leg of each mouse. Then, 10 minutes before the specified time points (2, 4, 6, 8, and 24 hours) after administration, 30 mg / mL luciferin solution in PBS(-) was administered intraperitoneally to the mouse at a dose of 150 mg / kg body. Ten minutes after administration of the luciferin solution, under isoflurane anesthesia, the luminescence intensity at the specified time points after administration was measured using an in vivo imaging system (Xenogen, IVIS), and protein expression levels were calculated.
[0211] <Evaluation results> (1) Evaluation results of siRNA-containing lipid nanoparticles Tables 1 and 2 show the evaluation results of the siRNA-containing lipid nanoparticles obtained using the lipids of each Example and Comparative Example.
[0212] [Table 1]
[0213] [Table 2]
[0214] As shown in Table 1, the lipid nanoparticles obtained from the lipids of Examples 1 to 12 have low particle sizes and PDIs. When the particle size and PDI of lipid nanoparticles are low, the lipid nanoparticles can be more easily delivered to target cells or tissues. Specifically, because the particle size and PDI are low, when the target tissue is a tumor, for example, the lipid nanoparticles tend to be smaller than the size of the pores in the tumor's blood vessels, making it easier for the lipid nanoparticles to be delivered into the tissue. Furthermore, the lipid nanoparticles obtained from the lipids of Examples 1 to 12 have a low charge measured in Tris-HCl at pH 7.4. Living body blood has an environment of approximately pH 7.4, and in such an environment, if the lipid nanoparticles have a strong cationic character (high charge), nonspecific adsorption or immune reactions may occur, or the lipid nanoparticles may become toxic or be easily metabolized before reaching target cells or tissues. The lipid nanoparticles obtained from the lipids of Examples 1 to 12 have a low charge (close to 0 mV) at pH 7.4, which can reduce concerns about toxicity and metabolism.
[0215] Furthermore, as shown in Table 1, the lipid nanoparticles obtained from the lipids of Examples 1 to 12 have a high encapsulation rate of siRNA. Therefore, lipid nanoparticles encapsulating siRNA can be obtained efficiently.
[0216] Furthermore, as shown in Table 1, the results of the GFP assay and cell toxicity experiments show that the lipid nanoparticles obtained from the lipids of Examples 1 to 12 showed low values in the GFP assay. This indicates that the green fluorescent protein gene (EGFP) in HT1080-EGFP (human fibrosarcoma) cells was effectively knocked down, meaning that the lipid nanoparticles reached the cells and inhibited the expression of the gene by siRNA. Therefore, the lipids of Examples 1 to 12 can be used to effectively deliver siRNA into cells.
[0217] Furthermore, as shown in Examples 1 to 6 in Table 1, the lipids in which the first amino acid is a hydrophilic amino acid (Examples 1 to 5) show better results in the GFP assay than the lipid in which the first amino acid is not hydrophilic (Example 6). Therefore, lipids in which the first amino acid is a hydrophilic amino acid can more effectively deliver a compound to be introduced, such as a nucleic acid, to target cells or tissues in vivo.
[0218] Furthermore, the CCK assay and LDH assay shown in Table 1 are evaluations related to cytotoxicity, and it can be seen that the lipids of Examples 1 to 3, 5, and 6 also have low cytotoxicity. Note that, to introduce siRNA into cells, a relatively larger amount of lipid is used than when introducing mRNA into cells, but the lipids of Examples 1 to 3, 5, and 6 can reduce toxicity even when a relatively large amount of lipid is applied to cells.
[0219] The lipids in Examples 10 to 12 have a different lipophilic region from the lipids in Examples 1 to 9. The results of Examples 5 and 10 show that good results can be obtained even if the number of unsaturated bonds in the hydrocarbon group in the lipophilic region is changed. Furthermore, the results of Examples 2, 11, and 12 show that even if the number of carbon atoms in the hydrocarbon group in the lipophilic region is changed, it is possible to obtain good results within the desired range (specifically, within the range of R 1 It can be seen that good results can be obtained if the number of carbon atoms in the hydrocarbon group is 32 to 48.
[0220] Next, Comparative Examples 1 to 4 and 12 in Table 2 show the results using lipids having the same lipophilic region and a hydrophilic region consisting of a single amino acid, each of which is different from the others. As shown in Comparative Example 1 in Table 2, the lipid nanoparticles obtained from the lipids of Comparative Examples 1 and 12 had large particle sizes and PDI values. Therefore, it can be seen that lipids with a single amino acid as the hydrophilic region, such as those of Comparative Examples 1 and 12, have difficulty delivering the compound to be introduced to target cells or tissues. On the other hand, as shown in Comparative Examples 2 to 4 in Table 2, the lipid nanoparticles obtained from the lipids of Comparative Examples 2 to 4 did not have larger particle sizes or PDI values than those of Comparative Example 1, but the GFP assay results were large. Therefore, it can be seen that lipids with a single amino acid as the hydrophilic region, such as those of Comparative Examples 2 to 4, in which the side chain of the amino acid is basic, can improve particle size and PDI compared to lipids with a non-basic amino acid side chain (Comparative Examples 1 and 12), but are difficult to efficiently deliver the compound to be introduced into cells. Furthermore, it can be seen that lipids with a hydrophilic region consisting of two amino acids, as shown in each example, are effective.
[0221] Furthermore, Comparative Examples 5 to 10 in Table 2 show the results for lipids in which the number of carbon atoms in the hydrocarbon group in the lipophilic region was changed compared to the lipid in Comparative Example 4. Specifically, compared to the lipid in Comparative Example 4 in which the hydrocarbon group in the lipophilic region has 36 carbon atoms, the lipid in Comparative Example 5 in which the hydrocarbon group has 20 carbon atoms, the lipid in Comparative Example 8 in which the hydrocarbon group has 22 carbon atoms, and the lipid in Comparative Example 9 in which the hydrocarbon group has 28 carbon atoms exhibit significantly worse particle size and / or PDI. In contrast, the lipid in Comparative Example 6 in which the hydrocarbon group has 32 carbon atoms and the lipid in Comparative Example 7 in which the hydrocarbon group has 44 carbon atoms are found to have equivalent particle size and PDI to the lipid in Comparative Example 4. Therefore, the results of Comparative Examples 4 to 9 in Table 2 show that when the number of carbon atoms in the hydrocarbon group in the lipophilic region is outside the range of 32 to 48, either or both of the particle size and PDI deteriorate significantly. Furthermore, the lipids of Comparative Examples 8 and 9 have a difference in the number of carbon atoms between the branched chains of the branched hydrocarbon groups in the lipophilic region (10 or 16). The lipids of Comparative Examples 8 and 9 have worse particle size and PDI compared to lipids in which there is no difference in the number of carbon atoms between the branched chains, such as the lipids of Comparative Examples 6 and 7. Therefore, it can be seen that when the hydrocarbon groups in the lipophilic region are branched, better results are obtained when the difference in the number of carbon atoms between the branched hydrocarbon groups is smaller.
[0222] Furthermore, from the results using the lipids of Example 1 in Table 1 and the lipids of Comparative Examples 10 and 11 in Table 2, it can be seen that better results are obtained when the lipid affinity region, which is a hydrocarbon group, is directly bonded to the hydrophilic region, which is an amino acid moiety, rather than when a bond is formed via an ester group or amide group at the bonding site between the lipid affinity region and the hydrophilic region.
[0223] (2) Evaluation results of lipid nanoparticles containing mRNA Next, the evaluation results of the mRNA-containing lipid nanoparticles prepared using the lipids of Examples 1, 2, and 5 are shown in Table 3.
[0224] [Table 3]
[0225] The lipid nanoparticles containing mRNA obtained using the lipids of Examples 1, 2, and 5 have a small particle size and PDI, similar to the lipid nanoparticles containing siRNA described above, making it easier for the lipid nanoparticles to reach target cells and tissues. Furthermore, the lipid nanoparticles obtained from the lipids of Examples 1, 2, and 5 have a low charge measured in Tris-HCl at pH 7.4, which can suppress nonspecific adsorption and immune reactions in vivo.
[0226] Furthermore, as shown in Table 3, the lipid nanoparticles obtained from the lipids of Examples 1, 2, and 5 have a high mRNA encapsulation rate. Therefore, lipid nanoparticles encapsulating mRNA can be obtained efficiently.
[0227] Furthermore, as shown in Table 3, the protein expression levels and the results of the CTF assay (toxicity evaluation) indicate that the lipid nanoparticles obtained from the lipids of Examples 1, 2, and 5 express a certain amount of the desired protein, which indicates that the lipid nanoparticles reach the cells and express the protein through the mRNA contained in the lipid nanoparticles. Therefore, the lipids of Examples 1, 2, and 5 can effectively deliver mRNA into cells. Furthermore, as shown in Table 3, the lipids of Examples 1, 2, and 5 induced a high number of viable cells in cell experiments, indicating that the lipids of Examples 1, 2, and 5 also have low cytotoxicity when used to deliver mRNA to target cells or tissues.
[0228] Table 3 also shows an example in which the lipid (r1) of Reference Example 1, which is used as the lipid for the mRNA vaccine, was used. It can be seen that the results using the lipids of Examples 1, 2, and 5 were better than the results using the lipid of Reference Example 1.
[0229] (3) Evaluation results of in vivo animal experiments Next, the evaluation results of lipid nanoparticles for in vivo animal experiments prepared using the lipids of Examples 2, 11, and 12 are shown in Table 4.
[0230] [Table 4]
[0231] The results of Example 2 show that the presence of polyethylene glycol-modified lipids when preparing a lipid nanoparticle-containing solution can significantly improve protein expression levels. Furthermore, as can be seen from the results of Examples 11 and 12, even when lipid nanoparticle-containing solutions prepared from the lipids of Examples 11 and 12 are used, it can be seen that the protein expression levels can be significantly improved. Therefore, it is expected that the lipid of this embodiment can obtain better properties by adding molecules other than the lipid of this embodiment when preparing a lipid nanoparticle-containing solution. [Industrial Applicability]
[0232] According to the present invention, it is possible to provide lipids and compositions that can effectively deliver transfection compounds such as nucleic acids into the cytoplasm.
Claims
1. A lipid represented by the following formula (I): 【Chemistry 1】 (In the formula, R 1 is a hydrocarbon group having 32 to 44 carbon atoms, R 2 is the side chain of one amino acid, the amino acid is selected from the group consisting of glycine, alanine, leucine, isoleucine, valine, arginine, lysine, glutamic acid, glutamine, aspartic acid, asparagine, cysteine, methionine, histidine, phenylalanine, tyrosine, threonine, serine, tryptophan, 2-aminoadipic acid, 2-aminobutyric acid, 2-aminoheptanoic acid, 2,3-diaminopropionic acid, hydroxylysine, norvaline, norleucine, ornithine, 2-aminopimelic acid, 2-aminosuberic acid, homoserine, aminomalonic acid, and aminophenylalanine; R 3 is the side chain of a basic amino acid selected from the group consisting of lysine, histidine, arginine, ornithine, 2,3-diaminopropionic acid, and aminophenylalanine. R 1 is a lipid represented by the following formula (II): 【Chemistry 2】 (In the formula, R 11 is a hydrocarbon group having a carbon number a, and R 12 is a hydrocarbon group having a carbon number b, Here, a and b satisfy 31≦a+b≦43 and 1≦b-a≦5.
2. R 2 is a side chain of a hydrophilic amino acid.
3. R 2 is a side chain of an amino acid selected from the group consisting of aspartic acid, glutamic acid, histidine, serine and threonine.
4. R 2 is a side chain of an amino acid selected from the group consisting of aspartic acid, glutamic acid, histidine and threonine.
5. R 3 The lipid according to any one of claims 1 to 4, wherein is a side chain of an amino acid selected from the group consisting of lysine, histidine, and arginine.
6. R 3 is the side chain of arginine.
7. R 11 is a linear hydrocarbon group, and R 12 The lipid of claim 1 , wherein is a linear hydrocarbon group.
8. A lipid represented by any one of the following formulas (Ia) to (Il): 【Transformation 3】 【Chemistry 4】
9. The lipid according to claim 1 or 8 for introducing a compound to be introduced, which is a biologically active substance, into a cell.
10. The lipid of claim 9, wherein the introduced compound is a nucleic acid.
11. The lipid according to claim 10, wherein the nucleic acid is a nucleic acid having an effect of suppressing the expression of a target gene using RNA interference (RNAi), or is mRNA.
12. The lipid of claim 11 , wherein the nucleic acid is siRNA or mRNA.
13. A composition of the lipid of claim 1 or 8 and an introduced compound which is a biologically active substance.
14. The composition of claim 13, wherein a plurality of the lipids are assembled to form lipid nanoparticles, and the introduced compound is contained within the lipid nanoparticles.
Citation Information
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