A method for preparing an antibody complex
Through gene recombination and aldehyde group reaction under frozen conditions, the stable preparation of C-terminal-C-terminal-linked bivalent or bispecific antibody complexes is achieved, solving the problem of ligation instability in the prior art, and improving the affinity and blood half-life of the antibody.
Patent Information
- Application Number
- CN201810461883.4
- Authority / Receiving Office
- CN · China
- Patent Type
- Patents(China)
- Current Assignee / Owner
- Filing Date
- 2018-05-15
- Publication Date
- 2025-08-29
- Estimated Expiration
- 2038-05-15
AI Technical Summary
The prior art is difficult to achieve C-terminal-C-terminal-linked divalent or bispecific antibody complexes stably and efficiently, and conventional methods such as disulfide bond bridging and click chemistry are not stable and complex enough.
FGE is fused at the C-terminal end of the antibody by gene recombination, and the amino acid sequence is recognized, and site-directed aldehyde group modification is performed, and then reacts with an aldehyde reactive bifunctional linker under frozen conditions to form a covalent C-terminal-C-terminal linkage.
The conditions are mild, the reaction speed is fast, the yield is high, the generated hydrazone or oxime bond is stable under physiological conditions, and the affinity of the antibody and blood half-life are prolonged.
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Abstract
Description
Technical Field
[0001] The present invention belongs to the field of biomedicine and relates to a method for preparing a C-terminal-C-terminal (carboxyl-terminal-carboxyl-terminal) linked bivalent or bispecific, and multivalent or multispecific antibody complex, in particular a method for preparing a nanobody complex. Background Art
[0002] To date, the US FDA has approved more than 50 monoclonal antibody drugs for market entry. These drugs have played a significant role in the treatment of cancer, infection, autoimmune diseases and other diseases. According to statistics, global sales of antibody drugs reached US$75 billion in 2013, accounting for half of all biopharmaceutical sales. In addition to the monoclonal antibodies that have been marketed, there are more than 300 antibodies under development. Among these antibodies, multivalent and multispecific engineered antibodies synthesized from antibody fragments are occupying an increasingly high proportion due to their superior properties (Holliger, P. and PJ Hudson (2005). "Engineered antibody fragments and the rise of single domains." Nature Biotechnology 23(9):1126-1136). Multivalent or multispecific antibodies have the following advantages over antibody monomers. First, because they have multiple antigen binding sites, multivalent or multispecific antibodies have higher affinity, so they can bind to target molecules more quickly and stably in vivo or in vitro. Second, due to the increase in molecular weight, the half-life of the drug circulating in the body is prolonged, making the drug's duration of action longer. Third, multispecific antibodies can recognize different antigens, which gives them new functions that conventional antibodies do not have. For example, they are used to recruit specific T cells (bispecific T cell engager, BiTE) to kill tumor cells. Among them, the bispecific antibody (Blinatumomab) constructed with a single chain variable region antibody (single chain fragment variable, scFv) as a unit can effectively treat leukemia and non-Hodgkin's lymphoma and was approved for marketing by the US FDA at the end of 2014. In addition, multispecificity is also widely used in the treatment of various toxins or pathogens in the body and in in vitro diagnosis, and has broad application prospects and markets.
[0003] Most of the existing methods for preparing bivalent or bispecific, as well as multivalent or multispecific antibodies, use recombinant gene expression technology, which specifically involves sequentially connecting the gene sequences of antibody fragments and inserting genes of flexible peptide segments such as glycine serine repeat sequences or sequences of natural antibody hinge regions between the antibody gene sequences to increase the degree of freedom of the antibody unit (Cuesta, AM, et al. (2010). Trends in Biotechnology 28 (7): 355-362). Although this conventional method has been widely used, its technical properties determine that it can only synthesize C-terminal-N-terminal (carboxyl-terminal-amino-terminal) connected multi-antibody complexes. Since the active region of the antibody is mostly near the N-terminus, the C-terminal-N-terminal connection method is likely to cause steric hindrance at the N-terminus, affecting the activity of the antibody (van Lith, SAM, et al. (2017), Bioconjug Chem 28 (2): 539-548). Therefore, developing C-terminal-C-terminal connection technology is the most ideal approach. Existing C-terminal-C-terminal connection technologies mostly use disulfide bridging and click chemistry. The disulfide bridging method is often unstable and easily affected by local disulfide bonds, while the click chemistry method has many processes and is complicated (Witte, MD, et al. (2012), Proceedings of the National Academy of Sciences of the United States of America 109(30):11993-11998). Therefore, there is an urgent need to develop a simple and stable C-terminal-C-terminal connection technology.
[0004] The main building blocks of existing multivalent or multispecific antibodies are scFv and nanobodies (sdAbs). Nanobodies, also known as single-domain antibodies, are a type of antibody molecule found in camelids. They are only one-tenth the size of conventional monoclonal antibodies, yet possess comparable antigen-binding capacity; they also offer advantages in stability, prokaryotic expression, and ability to bind to hidden epitopes. Due to their smaller size compared to scFvs, nanobodies are more suitable as building blocks for multivalent or multispecific antibodies, offering broad application prospects and a broad market (Muyldermans, S. (2013). Vol. 82 82:775-797).
[0005] Due to the important role of bivalent or bispecific, multivalent or multispecific antibodies, the existing C-terminal-N-terminal connection synthesis method needs to be improved, and developing a simple and stable C-terminal-C-terminal connection is the most ideal synthesis method. Summary of the Invention
[0006] To solve the above problems, the present invention provides a method for synthesizing a covalent C-terminus-C-terminus linked bivalent antibody complex using a single domain antibody or a nanobody as a building block.
[0007] A method for preparing a C-terminal-C-terminal linked bivalent antibody or bispecific antibody complex comprises the following steps:
[0008] (1) FGE recognition amino acid sequence is fused to the C-terminus of the antibody by gene recombination, and FGE is added in vitro for catalysis to obtain an antibody with a C-terminal site-specific aldehyde modification;
[0009] (2) reacting the antibody modified with a C-terminal site-specific aldehyde group with an aldehyde-reactive homobifunctional linker under freezing conditions to obtain a bivalent antibody complex, wherein the molar ratio of the antibody modified with a C-terminal site-specific aldehyde group to the aldehyde-reactive homobifunctional linker is 1:0.4-1.2;
[0010] (3) reacting the antibody modified with a C-terminal site-specific aldehyde group with an aldehyde-reactive homobifunctional linker under freezing conditions to obtain an antibody connected to a single homobifunctional linker, wherein the molar ratio of the antibody modified with a C-terminal site-specific aldehyde group to the aldehyde-reactive homobifunctional linker is 1:5-15;
[0011] (4) reacting the antibody obtained in step (3) and the antibody modified with a C-terminal site-specific aldehyde group under freezing conditions to obtain a bispecific antibody complex, wherein the variable regions of the antibody obtained in step (3) and the antibody modified with a C-terminal site-specific aldehyde group are different.
[0012] Furthermore, in the above technical solution, in step (2), step (3) and step (4), the freezing conditions are -5°C to 30°C, preferably -10°C to 25°C, and more preferably -20°C.
[0013] Furthermore, in the above technical solution, in step (2), step (3) and step (4), the reaction under freezing conditions refers to reacting at a temperature of -5°C to -30°C for 2 to 48 hours, the temperature is preferably -10°C to -25°C, more preferably -20°C, and the reaction time is preferably 10-30 hours, more preferably 24 hours.
[0014] Furthermore, in the above technical solution, in step (2), step (3) and step (4), the pH value of the reaction system reacted under freezing conditions is 4.0 to 7.5, preferably 4-5, more preferably 4.
[0015] Furthermore, in the above technical solution, in step (1), the antibody is a nanobody, a single-chain antibody scFV or a variable region antibody Fab.
[0016] Furthermore, in the above technical solution, in step (1), the FGE recognition amino acid sequence is cysteine-X-proline-X-arginine, wherein X is any natural amino acid, and preferably the FGE recognition amino acid sequence is LCTPSR. Further, in the above technical solution, in step (2) and step (3), the aldehyde-reactive homobifunctional linker is RLR, wherein R is an aldehyde-reactive group comprising an amino group, a hydrazide group, an oxyamino group, a phenylhydrazine group or a pyridinehydrazine group, and L is a polymer having -(CH2CH2-O)n and / or -(O-CH2CH2)n as constituent units, wherein n is an integer from 1 to 100, preferably from 1 to 50, and more preferably from 10 to 30.
[0017] Furthermore, in the above technical solution, the gene coding sequence of FGE is derived from Mycobacterium tuberculosis or humans.
[0018] Furthermore, in the above technical solution, in step (3), the reaction product after the reaction under freezing conditions is separated by size exclusion chromatography to obtain a single antibody connected to a bifunctional linker.
[0019] Furthermore, in the above technical solution, in step (4), the molar ratio of the antibody obtained in step (3) to the antibody modified with a C-terminal site-specific aldehyde group is 1:1-3.
[0020] In the above technical solution, a reducing agent is further added to the reaction system described in step (2), step (3) and step (4) to reduce the generated C=N double bond to a CN single bond, which can increase the stability of the hydrazone bond or the oxime bond. There is no particular limitation on the reducing agent and the amount thereof added. Those skilled in the art can select an appropriate reducing agent and the amount thereof added according to conventional techniques. Preferably, the reducing agent can use sodium borohydride, sodium cyanoborohydride, etc., and the amount added is more than 10 times the molar amount of the substance to be reduced.
[0021] In the present invention, the FGE is formylglycine generating enzyme, the C-terminal-C-terminal linked bivalent antibody complex refers to a dimer formed by linking two identical antibodies via their carboxyl termini to a homobifunctional linker, and the C-terminal-C-terminal linked bispecific antibody complex refers to a bispecific antibody complex formed by linking two antibodies having different variable regions via their carboxyl termini to a homobifunctional linker. The antibody linked to a single homobifunctional linker refers to a complex formed by linking an antibody to only one of the two ends of the homobifunctional linker.
[0022] In a preferred technical solution of the present invention, the antibody with a C-terminal site-specific aldehyde modification can be prepared according to the following method:
[0023] ① Add the gene sequence of the recognition peptide of formylglycine generating enzyme (FGE) to the 3' end of the gene sequence of the antibody, connect the recombinant gene to a vector, and transfer it into a host cell such as Escherichia coli expression host bacteria or Pichia pastoris or mammalian cells for recombinant expression. The expressed antibody is extracted and purified to obtain a recombinant antibody with the FGE recognition amino acid sequence fused to the 3' end (C-terminus). The extraction and purification can be carried out by conventional methods in the art. For example, the purification can be performed by preliminary purification using metal chelate affinity chromatography, and then fine purification by size exclusion chromatography, etc.; wherein the FGE recognition peptide is preferably LCTPSR, and the plasmid is preferably pET21a or pET23a;
[0024] ② In vitro, the recombinant antibody is mixed with a certain amount of FGE, and under appropriate buffer conditions and temperature, FGE catalyzes the conversion of the C-terminal tag of the recombinant antibody into a side chain with an aldehyde group, thereby obtaining the C-terminal site-specific aldehyde-modified antibody of the present invention, wherein the added amount of the recombinant antibody and FGE is preferably a molar ratio of 1:5 to 10, the buffer is preferably triethanolamine-hydrochloric acid buffer, pH 7.0-9.0, 1-5mM mercaptoethanol is added to the buffer, the ionic strength is 50-150mM sodium chloride, and the catalytic temperature is preferably 18°C to 30°C.
[0025] In a preferred technical solution of the present invention, the C-terminal-C-terminal linked bivalent antibody complex can be prepared as follows: the C-terminal site-specific aldehyde-modified antibody obtained above is mixed with an aldehyde-reactive homobifunctional linker at a molar ratio of 1:0.5 to 1.0, and the mixture is reacted at -5°C to -30°C and pH 4-5 for 2-24 hours to complete the connection between the aldehyde-reactive homobifunctional linker and the C-terminal aldehyde group of the antibody, thereby forming a covalently stable C-terminal-C-terminal linked bivalent antibody complex with a final yield of about 50%.
[0026] In a preferred technical solution of the present invention, the C-terminal-C-terminal linked bispecific antibody complex can be prepared as follows:
[0027] (1) The C-terminal site-directed aldehyde-modified antibody obtained above is mixed with an aldehyde-reactive homobifunctional linker at a molar ratio of 1:5-15, and the mixture is reacted at -5°C to -30°C and pH 4-5 for 2-24 hours to complete the connection between the aldehyde-reactive homobifunctional linker and the C-terminal aldehyde group of the antibody, thereby obtaining a single homobifunctional linker-linked antibody; wherein, preferably, the reaction product can be separated by size exclusion chromatography to obtain a purified single homobifunctional linker-linked antibody for use in the next reaction.
[0028] (2) The antibody linked to the single homobifunctional linker obtained in the above step (1) is mixed with the antibody modified with a C-terminal site-directed aldehyde group in a molar ratio of 1:1 to 3, and the mixture is reacted at -5°C to -30°C and pH 4-5 for 2-24 hours, wherein the variable regions of the antibody linked to the single homobifunctional linker and the antibody modified with a C-terminal site-directed aldehyde group are different, thereby obtaining a C-terminal-C-terminal linked bispecific antibody complex with a final yield of about 30%.
[0029] The present invention has the following advantages and effects compared to the prior art:
[0030] The present invention realizes a C-terminal-C-terminal linked bivalent or bispecific antibody complex under freezing conditions, which has mild conditions, fast reaction speed and high yield. Compared with the C-terminal-N-terminal linked bivalent or bispecific antibody complex produced by conventional methods, the present invention can obtain a higher affinity (such as Figure 1 ), where the affinity is based on the equilibrium dissociation constant measured by surface plasmon resonance. Compared to existing disulfide bridging or click chemistry methods for preparing C-terminus-C-terminus linked bivalent or bispecific antibodies, the present invention has superior specificity and fewer steps. Linking occurs only at the aldehyde group generated at the C-terminus. The resulting hydrazone or oxime bond is stable under physiological conditions and irreversible upon reduction with a reducing agent. Furthermore, the addition of a polyethylene glycol linker prolongs its blood half-life. BRIEF DESCRIPTION OF THE DRAWINGS
[0031] Figure 1 Schematic diagram of the structure of a nanobody, a CN-linked bivalent or bispecific nanobody structure prepared by traditional methods, and a CC-linked bivalent or bispecific nanobody structure prepared by the present invention.
[0032] Figure 2 A is the result of labeling the aldehyde-modified nanobody with fluorescent molecules and separating it on SDS-PAGE. Figure 2 B is the precise quantification of aldehyde-modified nanoantibodies by high performance liquid chromatography coupled with point spray ionization orbital ion trap mass spectrometry, and the spectrum shown is the molecular weight-abundance diagram after deconvolution.
[0033] Figure 3 The results of SDS-PAGE separation of the products after 24 h of reaction at different pH values and temperatures for the addition of a dihydrazide functionalized PEG400 linker.
[0034] Figure 4 A is the change of bivalent antibody yield at -20℃ freezing temperature as measured by HPLC. Figure 4 B shows the change of bivalent nanobody yield over time at different temperatures.
[0035] Figure 5 A is the separation result of bivalent nanobodies with different lengths of connectors added on SDS-PAGE, Figure 5 B is the separation and purification of bivalent nanobodies containing linkers of different lengths by size exclusion chromatography.
[0036] Figure 6 To separate the nanobody B monomer connected to the bifunctional linker using size exclusion chromatography DETAILED DESCRIPTION
[0037] The following non-limiting examples are provided to enable those skilled in the art to more fully understand the present invention, but are not intended to limit the present invention in any way. In the following examples, unless otherwise specified, the experimental methods used are conventional methods, and the materials and reagents used can be purchased from biological or chemical companies.
[0038] Materials used in the following examples:
[0039] Nanobody A: The encoding gene sequence is as shown in SEQ ID NO.1, wherein the sequence ctgtgcaccccgtctcgt at positions 511-528 is the FGE recognition sequence;
[0040] Nanobody B: The encoding gene sequence is as shown in SEQ ID NO.2, wherein the sequence ctgtgcaccccgtctcgt at positions 499-516 is the FGE recognition sequence.
[0041] Example 1 C-terminal site-directed modification of nanobodies
[0042] The coding gene sequence of Nanobody A was cloned into the expression vector plasmid pET23a and introduced into Escherichia coli T7Shuffle (DE3) for expression. The cells were collected and the cells were disrupted. The Nanobody was purified from the cell supernatant using metal chelate affinity chromatography HisTrap HP 5mL (GE Healthcare), with a final yield of about 100 mg per liter of fermentation broth. The purified Nanobody was concentrated by ultrafiltration and exchanged into triethanolamine buffer (25mM TEAM, pH 9.0, 150mM NaCl, 1mM mercaptoethanol) at a Nanobody concentration of 5mg / mL. FGE enzyme (FGE enzyme molecular weight is about 33kDa, Nanobody molecular weight is about 18kDa) with a final concentration of about one-tenth the molar amount of the Nanobody, i.e., 1mg / mL, with a purity of >90% was added. The reaction was catalyzed at 18°C with gentle shaking for 20 hours. After the reaction, the protein precipitate was removed by centrifugation to obtain Nanobody A modified with site-directed aldehyde modification at the carboxyl terminus, which was named Nanobody A0.
[0043] The aldehyde modification efficiency was accurately detected by high performance liquid chromatography coupled with high resolution electrospray ionization mass spectrometry. Figure 2B shows the molecular weight-abundance diagram after deconvolution of the protein mass spectrum. In the spectrum, the peaks of the protein (nanoantibody) before and after modification can be seen. After aldehyde modification, the weight of the protein is reduced by about 18Da. The efficiency of protein aldehyde modification can be determined by comparing the integrated peak areas of the two. The protein solution after the reaction can also be concentrated by ultrafiltration and exchanged into an acidic buffer (such as 0.1M acetate buffer pH 4.0 containing 150mM NaCl), and then a fluorescent molecule Lucifer Yellow CH lithium slat (Thermo Fisher) with a hydrazide group is added at a final concentration of 500μmol / L to label the aldehyde group. The C-terminal aldehyde modification efficiency can also be preliminarily quantified by SDS-PAGE analysis, as shown in FIG. Figure 2 As shown in A, due to the labeling with Lucifer Yellow fluorescent molecules, the protein can be seen to have obvious fluorescence under UV imaging. At the same time, the increase in molecular weight due to the labeling of a fluorescent molecule causes the protein to have a decreased mobility on SDS-PAGE. In contrast, the unlabeled protein band migrates upward, and the aldehyde modification can be roughly quantified by grayscale scanning.
[0044] Example 2 Preparation of CC-linked bivalent nanobodies under freezing conditions
[0045] The carboxyl-terminal site-directed aldehyde-modified Nanobody A (Nanobody A0) prepared in Example 1 was ultrafiltrated and concentrated to an acidic buffer, 0.1M acetate buffer pH 4.0 or 0.1M MES buffer pH 5.5, or a neutral buffer 0.2M PBS pH 7.4, and the concentration of Nanobody A0 was 2 mg / mL, i.e., 100 μmol / L. A certain amount of the prepared Nanobody A0 was taken, and a bifunctional linker HZ-PEG-HZ 400 (bisacylhydrazide polyethylene glycol-400) and a reducing agent, sodium cyanoborohydride, were added, wherein the final concentrations of HZ-PEG-HZ 400 and sodium cyanoborohydride in the reaction system were 50 μmol / L and 1 mmol / L, respectively, that is, the molar ratio of PEG to Nanobody in the reaction system was 1:2, and the molar ratio of sodium cyanoborohydride to Nanobody was 10:1. The reaction mixture is added and placed in a low temperature tank to be cooled to -30 ° C, so that the reaction mixture is in a frozen state, and then adjusted to different temperatures, namely -30 ° C, -20 ° C, -10 ° C and -5 ° C, and reacted for 0 to 25 hours. Among them, the reaction mixture is frozen and then adjusted to each reaction temperature, which can shorten the time for the sample to freeze, thereby shortening the reaction time. In the present invention, the reaction mixture is directly placed in the corresponding temperature. In addition, 37 ° C and -80 ° C reaction conditions are also provided, that is, as described above, the solution is changed to a nano antibody in different acidic buffers, HZ-PEG-HZ 400 and a reducing agent (added in the same amount as above) are added, and the temperature of the reaction solution is adjusted to 37 ° C and -80 ° C, and the reaction is continued for 0 to 25 hours. Figure 3 The electrophoresis diagram of the reaction products after 24 hours of reaction at different pH values and temperatures on SDS-PAGE shows that obvious bivalent nanobody bands can be seen under the conditions of -20°C and pH 4.0.
[0046] The pH of the solution after the reaction is adjusted to neutral with sodium hydroxide, and then the mixture after the reaction is separated and analyzed by high performance liquid chromatography. The reaction yield can be calculated by comparing the corresponding peak integrated areas. Figure 4 A is the change of bivalent antibody yield at -20℃ freezing temperature as measured by HPLC. Figure 4 Figure B shows the change in bivalent nanobody yield over time at different temperatures. It can be seen that the yield reaches its maximum around 24 hours of reaction, with reactions being slower at -30°C and -5°C. The reaction occurs more rapidly between -10°C and -20°C. At this temperature, the bivalent nanobody yield ranges from 30% to 50%.
[0047] Figure 5A is the electrophoresis diagram of the reaction products of the above-mentioned reaction products with different lengths of connectors added on SDS-PAGE, wherein lane M is a protein marker, lanes 1-4 are the reaction products after adding a bifunctional linker (final concentration of 50 μmol / L), O-linker, HZ-PEG-HZ 400, HZ-PEG-HZ1000 and HZ-PEG-HZ2000 to Nanobody A0 (final concentration of 100 μmol / L), and lanes 5-8 are the reaction products after adding a bifunctional linker (final concentration of 50 μmol / L), O-linker, HZ-PEG-HZ400, HZ-PEG-HZ1000 and HZ-PEG-HZ2000 to Nanobody B0 (final concentration of 100 μmol / L). Figure 5 As can be seen in A, a certain amount of bivalent nanobody bands appear at around 40 kDa in lanes 1-8, indicating that for nanobodies A0 and B0, a certain amount of bivalent nanobodies can be generated after adding bifunctional linkers of different lengths and reacting under freezing conditions. Figure 5 B is a chromatogram showing the results of separation and purification of the reaction products by size exclusion chromatography after adding connectors of different lengths. Figure 5 As can be seen in B, monomers, monomers connected to the linker, and bivalent antibodies remain in the solution after the reaction, among which the bivalent antibody can be well separated for the next step of research.
[0048] Example 3 Preparation of CC-linked bispecific nanobodies by freezing method
[0049] (1) The coding gene sequence of nanobody B was cloned into the expression vector plasmid pET23a and introduced into Escherichia coli T7Shuffle (DE3) for expression. The cells were collected and the cells were disrupted. The nanobody was purified from the cell disruption supernatant using metal chelate affinity chromatography HisTrap HP 5mL (GE Healthcare), and the final yield was about 100 mg per liter of fermentation liquid. The purified nanobody was concentrated by ultrafiltration and exchanged into triethanolamine buffer (25mM TEAM, pH 9.0, 150mM NaCl, 1mM mercaptoethanol) at a nanobody concentration of 5mg / mL. FGE enzyme (FGE enzyme molecular weight is about 33kDa, nanobody molecular weight is about 18kDa) with a final concentration of about one-tenth of the nanobody molar amount, i.e., 1mg / mL, with a purity of >90% was added. The reaction was catalyzed by gentle shaking at 18°C for 20 hours. After the reaction, the protein precipitate was removed by centrifugation to obtain nanobody B with site-directed aldehyde modification at the carboxyl end, which was named nanobody B0.
[0050] (2) The nanoantibody B0 obtained in the previous step was ultrafiltrated and concentrated to an acidic buffer solution (0.1M acetate buffer pH 4.0, containing 150mM NaCl) with a final concentration of 2mg / mL, i.e., 100μmol / L. A certain amount of the prepared nanoantibody B0 was taken and bifunctional linkers of different lengths, O-linker, HZ-PEG-HZ400, HZ-PEG-HZ1000, and HZ-PEG-HZ2000, were added respectively. The final concentration of the bifunctional linker in the reaction system was 1mmol / L, i.e., the molar ratio of the bifunctional linker to the nanoantibody in the reaction system was 10:1. In addition, sodium cyanoborohydride was added at a final concentration of 1mmol / L. The reaction mixture was reacted at -20°C for 24 hours.
[0051] The size exclusion chromatography separation steps are as follows: the reaction product is placed at room temperature and heated, and after melting, 1M NaOH solution is added to adjust the pH value to neutral, and then the reaction product is separated by size exclusion chromatography column Superdex 75 Increase 10 / 300GL (GE Healthcare) using 20mM phosphate 150mM NaCl pH 7.4 buffer as the running solution at a speed of 0.6mL / min, and the various components are collected and the bands are verified by SDS-PAGE. Finally, the nanobody B monomer connected to the homobifunctional linker is retained, such as Figure 6 shown. Figure 6 A is the chromatographic peak diagram of the product after the excessive addition of different connectors was separated and purified on size exclusion chromatography. Figure 6 B is SDS-PAGE identification of different chromatographic peaks (lanes 0, 3, 6, and 10 are the reaction products after excessive addition of bifunctional linker O-linker, HZ-PEG-HZ400, HZ-PEG-HZ1000, and HZ-PEG-HZ2000, respectively, and the remaining lanes are Figure 6 The corresponding chromatographic peak components in A). It can be seen that a certain amount of nanobodies connected to the linker can be effectively separated and purified for the next step of research.
[0052] (3) The homobifunctional linker-linked Nanobody B obtained in the previous step was mixed with an equimolar ratio of the aldehyde-modified Nanobody A from Example 1, and the reaction solution was adjusted to pH 4.0 with acetic acid. Sodium cyanoborohydride was added to a final concentration of 1 mmol / L, and then reacted at -20°C for at least 24 hours. The resulting reaction product was separated by size exclusion chromatography on a Superdex 75 Increase 10 / 300GL column to obtain the CC-linked bispecific Nanobody AB. The yield was 20% to 40%.
[0053] Example 4 Determination of affinity constants of bivalent and bispecific nanobodies
[0054] The binding affinity and kinetic parameters of bivalent or bispecific Nanobodies to antigens were determined by surface plasmon resonance (SPR) on a Biacore T200 using a CM5 sensor chip and HBS-EP (10 mM HEPES (pH 7.4), 150 mM NaCl, 3 mM EDTA, 0.05% v / v P20) running buffer. The antigen β2 microglobulin was coupled to the chip surface via the EDC / NHS method via amino groups, with a final loading of approximately 700 Ru. Each cycle consisted of a 120-second injection of the bivalent or bispecific Nanobody, followed by 180-second monitoring of dissociation, followed by a 60-second injection of glycine-HCl buffer (10 mM, pH 1.5) for regeneration. Kinetic parameters were determined using Biacore evaluation software by globally fitting the resulting sensorgrams to a standard 1:1 binding model. As shown in Table 1, A0 is a C-terminal aldehyde-modified nanobody A, B0 is a C-terminal aldehyde-modified monomeric nanobody B, A1-A4 are CC-linked bivalent nanobodies constructed using the method of the present invention with A0 as the unit, A1 uses an oxygen amino linker at both ends, i.e., O-linker, A2 uses a PEG400 linker with hydrazide groups at both ends, i.e., HZ-PEG-HZ 400, A3 uses a PEG1000 linker with hydrazide groups at both ends, i.e., HZ-PEG-HZ 1000, A4 uses a PEG2000 linker with hydrazide groups at both ends, i.e., HZ-PEG-HZ 2000, wherein the reaction temperature for connecting the bivalent nanobodies is -20 ° C, the reaction time is 24 h, and the pH value of the reaction system is 4.0. B1-B5 are CC-linked bivalent nanobodies constructed using the method of the present invention with B0 as the unit, and their specific meanings are the same as A1-A5, and the reaction conditions are the same as above. C1-C4 are CC-linked bispecific nanobodies constructed using the method of the present invention with nanobodies A0 and B0 as units. C1 uses an O-linker with oxygen amino groups at both ends, C2 uses a PEG400 linker with hydrazide groups at both ends, HZ-PEG-HZ 400, C3 uses a PEG1000 linker with hydrazide groups at both ends, HZ-PEG-HZ 1000, and C4 uses a PEG2000 linker with hydrazide groups at both ends, HZ-PEG-HZ 2000. The reaction temperature for the antibody connection is -20°C, the reaction time is 24h, and the pH value of the reaction system is 4.0. A5 and B5 are CN-linked bivalent nanobodies expressed by genetic recombination, and C5 and C6 are CN-linked bispecific nanobodies expressed by genetic recombination.The CN-linked bivalent or bispecific nanobody is prepared by conventional methods in the art, that is, two identical or different nanobody encoding genes are connected in series by chemical synthesis or PCR technology, and the connection between the two genes is a gene encoding a flexible amino acid sequence. In the present invention, three repeated glycine-glycine-glycine-glycine-serine flexible amino acid sequences are used as linkers, and the synthesized genes are then transferred into the expression plasmid pET21a for intracellular expression in Escherichia coli. The A5 sequence is SEQ ID NO.3, the B5 sequence is SEQ ID NO.4, the C5 sequence is SEQ ID NO.5, and the C6 sequence is SEQID NO.6. C5 and C6 are genes constructed with nanobody A0 and B0 as units to express CN-linked bivalent nanobodies by recombinant expression. The connection order of C5 is A0-B0, and the connection order of C6 is B0-A0. Both use three repeated glycine-glycine-glycine-glycine-serine flexible amino acid sequences as linkers. Table 1 shows the binding rate constants K of C-terminal-C-terminal bivalent Nanobodies, bispecific Nanobodies, and C-terminal-N-terminal bivalent Nanobodies and bispecific Nanobodies produced by conventional methods, as described above. a , the dissociation rate constant K d And the affinity constant K D .
[0055] Table 1.
[0056]
[0057] The results in Table 1 show that, using surface plasmon resonance, the affinity of CN- and CC-constructed bivalent nanobodies or bispecific antibodies was improved to varying degrees compared to their monomers. CC-linked A1 and A2 had 20- to 30-fold higher affinity than CN-linked A5. Similarly, B3 and B4 also had 20- to 30-fold higher affinity than B5. The affinity of CC-linked bispecific antibodies C1-C4 was approximately 40- to 50-fold higher than that of CN-linked C5 and C6. In summary, CC-linked bivalent or bispecific nanobodies are superior to CN-linked antibodies in antigen binding ability.
[0058] Finally, it should be noted that the above embodiments are merely examples for the purpose of clearly illustrating the present application and are preferred embodiments. They are not intended to limit the implementation methods. Those skilled in the art will readily appreciate that other variations or modifications based on the above descriptions are possible. It is not necessary and impossible to enumerate all implementation methods here. Obvious variations or modifications arising therefrom remain within the scope of protection of this application. Sequence Listing <110> Dalian University of Technology <120> Method for Preparing an Antibody Complex <130> 2011 <160> 6 <170> SIPOSequenceListing 1.0 <210> 1 <211> 537 <212> DNA <213> Synthetic ( ) <400> 1 catatggccc aggtgcagct cgtggagtct gggggagggt tggtgcaggc tggggggtca 60 ctgagactct cctgtgcagc ctctggatcc actttggatt cttattacat aggctggttc 120 cgccaggccc caggcaaaga gcgcgagggg gtctcatgta ttagtagtag tggtaatagc 180 atacgttatg tagattccgt gaaggaccga ttcaccatct ctagagacaa cggcaagaac 240 acggcctatc tccacatcaa cagcctgaaa cctgaggaca cggccgttta ttactgtgca 3..0 gcgagtcgtc gagggcgcat accgggccta ccttgtagtt tagtacgtga acgctatgcc 360 tattggggcc aggggaccca ggtcaccgtg agctcagaac ccaagacacc aaaaccacaa 420 ccacaaccac aaccacaacc ccaaccggat cctacaacag aaggaggcgg tgggagccac 480 caccaccacc accacggagg cggtgggagc ctgtgcaccc cgtctcgtta actcgag..37 <210> 2 <211> 525 <212> DNA <213> Synthetic () <400> 2 catatggccc aagttcaact gcaagaatct ggcggcggtt ctgttcaagc aggcggtagt 60 ctgcgtctga gttgtgcagc aagcggttat accgattccc gctattgtat ggcctggttt 120 cgtcaagctc cgggtaaaga acgcgagtgg gttgcacgta tcaacagcgg tcgcgatatc 180 acctactacg cagatagcgt taaaggccgc tttaccttca gccaggataa cgcgaaaaac 240 accgtctacc tgcagatgga tagtctggaa ccggaagata ccgcgaccta ttattgcgca 300 accgatatcc cgctgcgttg tcgcgatatt gtagcaaaag gcggcgacgg ttttcgttat 360 tggggtcaag gtacccaagt taccgtgagc tcagaaccca agacaccaaa accacaacca 420 caaccacaac cacaacccca acccaatcct acaacagaag aattccacca tcaccaccat 480 catggtggcg gtggttcgct gtgcaccccg tcccgttgac tcgag 525 <210> 3 <211> 1017 <212> DNA <213> Synthetic () <400> 3 catatggccc aggtgcagct cgtggagtct gggggagggt tggtgcaggc tggggggtca 60 ctgagactct cctgtgcagc ctctggatcc actttggatt cttattacat aggctggttc 120 cgccaggccc caggcaaaga gcgcgagggg gtctcatgta ttagtagtag tggtaatagc 180 atacgttatg tagattccgt gaaggaccga ttcaccatct ctagagacaa cggcaagaac 240 acggcctatc tccacatcaa cagcctgaaa cctgaggaca cggccgttta ttactgtgca 300 gcgagtcgtc gagggcgcat accgggccta ccttgtagtt tagtacgtga acgctatgcc 360 tattggggcc aggggaccca ggtcaccgtg gaacccaaga caccaaaacc acaaccacaa 420 ccacaaccac aaccccaacc ggatcctaca acagaagaat tcggtggtgg aggctccggc 480 ggagggggta gtggcggcgg tggaagtaag cttgcccagg tgcagctcgt ggagtctggg 540 ggagggttgg tgcaggctgg ggggtcactg agactctcct gtgcagcctc tggatccact 600 ttggattctt attacatagg ctggttccgc caggccccag gcaaagagcg cgagggggtc 660 tcatgtatta gtagtagtgg taatagcata cgttatgtag attccgtgaa ggaccgattc 720 accatctcta gagacaacgg caagaacacg gcctatctcc acatcaacag cctgaaacct 780 gaggacacgg ccgtttatta ctgtgcagcg agtcgtcgag ggcgcatacc gggcctacct 840 tgtagtttag tacgtgaacg ctatgcctat tggggccagg ggacccaggt caccgtgagc 900 tcagaaccca agacaccaaa accacaacca caaccacaac cacaacccca accggatcct 960 acaacagaag gaggcggtgg gagccaccac caccaccacc accaccacta actcgag 1017 <210> 4 <211> 1005 <212> DNA <213> Synthetic () <400> 4 catatggccc aagttcaact gcaagaatct ggcggcggtt ctgttcaagc aggcggtagt 60 ctgcgtctga gttgtgcagc aagcggttat accgattccc gctattgtat ggcctggttt 120 cgtcaagctc cgggtaaaga acgcgagtgg gttgcacgta tcaacagcgg tcgcgatatc 180 acctactacg cagatagcgt taaaggccgc tttaccttca gccaggataa cgcgaaaaac 240 accgtctacc tgcagatgga tagtctggaa ccggaagata ccgcgaccta ttattgcgca 300 accgatatcc cgctgcgttg tcgcgatatt gtagcaaaag gcggcgacgg ttttcgttat 360 tggggtcaag gtacccaagt taccgtggaa cccaagacac caaaaccaca accacaacca 420 caaccacaac cccaacccaa tcctacaaca gaagaattcg gaggcggtgg gagcggaggc 480 ggtgggagcg gaggcggtgg atccgcccaa gttcaactgc aagaatctgg cggcggttct 540 gttcaagcag gcggtagtct gcgtctgagt tgtgcagcaa gcggttatac cgattcccgc 600 tattgtatgg cctggtttcg tcaagctccg ggtaaagaac gcgagtgggt tgcacgtatc 660 aacagcggtc gcgatatcac ctactacgca gatagcgtta aaggccgctt taccttcagc 720 caggataacg cgaaaaacac cgtctacctg cagatggata gtctggaacc ggaagatacc 780 gcgacctatt attgcgcaac cgatatcccg ctgcgttgtc gcgatattgt agcaaaaggc 840 ggcgacggtt ttcgttattg gggtcaaggt acccaagtta ccgtgagctc agaacccaag 900 acaccaaaac cacaaccaca accacaacca caaccccaac ccaatcctac aacagaagga 960 ggcggtggga gccaccacca ccaccaccac caccactaac tcgag 1005 <210> 5 <211> 1008 <212> DNA <213> Synthetic () <400> 5 catatggccc aggtgcagct cgtggagtct gggggagggt tggtgcaggc tggggggtca 60 ctgagactct cctgtgcagc ctctggatcc actttggatt cttattacat aggctggttc 120 cgccaggccc caggcaaaga gcgcgagggg gtctcatgta ttagtagtag tggtaatagc 180 atacgttatg tagattccgt gaaggaccga ttcaccatct ctagagacaa cggcaagaac 240 acggcctatc tccacatcaa cagcctgaaa cctgaggaca cggccgttta ttactgtgca 300 gcgagtcgtc gagggcgcat accgggccta ccttgtagtt tagtacgtga acgctatgcc 360 tattggggcc aggggaccca ggtcaccgtg gaacccaaga caccaaaacc acaaccacaa 420 ccacaaccac aaccccaacc ggatcctaca acagaagaat tcggaggcgg tgggagcgga 480 ggcggtggga gcggaggcgg tggatccgcc caagttcaac tgcaagaatc tggcggcggt 540 tctgttcaag caggcggtag tctgcgtctg agttgtgcag caagcggtta taccgattcc 600 cgctattgta tggcctggtt tcgtcaagct ccgggtaaag aacgcgagtg ggttgcacgt 660 atcaacagcg gtcgcgatat cacctactac gcagatagcg ttaaaggccg ctttaccttc 720 agccaggata acgcgaaaaa caccgtctac ctgcagatgg atagtctgga accggaagat 780 accgcgacct attattgcgc aaccgatatc ccgctgcgtt gtcgcgatat tgtagcaaaa 840 ggcggcgacg gttttcgtta ttggggtcaa ggtacccaag ttaccgtgag ctcagaaccc 900 aagacaccaa aaccacaacc acaaccacaa ccacaacccc aacccaatcc tacaacagaa 960 ggaggcggtg ggagccacca ccaccaccac caccaccact aactcgag 1008 <210> 6 <211> 1008 < / / 212> DNA <213> Synthetic () <400> 6 [[ID=~18]]catatggccc aagttcaact gcaagaatct ggcggcggtt ctgttcaagc aggcggtagt 60 ctgcgtctga gttgtgcagc aagcggttat accgattccc gctattgtat ggcctggttt 120 cgtcaagctc cgggtaaaga acgcgagtgg gttgcacgta tcaacagcgg tcgcgatatc 180 acctactacg cagatagcgt taaaggccgc tttaccttca gccaggataa cgcgaaaaac 240 accgtctacc tgcagatgga tagtctggaa ccggaagata ccgcgaccta ttattgcgca 300 accgatatcc cgctgcgttg tcgcgatatt gtagcaaaag gcggcgacgg ttttcgttat 360 tggggtcaag gtacccaagt taccgtggaa cccaagacac caaaaccaca accacaacca 420 Note: There seems to be a small error in the original text where the tag < / / 212> should likely be <212>. This has been corrected in the translation. Also, the tag <213> has been translated as "Synthetic ()" which might need further clarification depending on the context, but it adheres to the translation rules as per the instructions.caaccacaac cccaacccaa tcctacaaca gaagaattcg gaggcggtgg gagcggaggc 480 ggtgggagcg gaggcggtgg atccgcccag gtgcagctcg tggagtctgg gggagggttg 540 gtgcaggctg gggggtcact gagactctcc tgtgcagcct ctggatccac tttggattct 600 tattacatag gctggttccg ccaggcccca ggcaaagagc gcgagggggt ctcatgtatt 660 agtagtagtg gtaatagcat acgttatgta gattccgtga aggaccgatt caccatctct 720 agagacaacg gcaagaacac ggcctatctc cacatcaaca gcctgaaacc tgaggacacg 780 gccgtttatt actgtgcagc gagtcgtcga gggcgcatac cgggcctacc ttgtagttta 840 gtacgtgaac gctatgccta ttggggccag gggacccagg tcaccgtgag ctcagaaccc 900 aagacaccaa aaccacaacc acaaccacaa ccacaacccc aaccggatcc tacaacagaa 960 ggaggcggtg ggagccacca ccaccaccac caccaccact aactcgag 1008
Claims
1. A method for preparing a C-terminal-C-terminal linked bispecific antibody complex, comprising the following steps: (1) By genetic recombination, the FGE recognition amino acid sequence is fused to the C-terminus of antibody A, and FGE is added in vitro for catalysis to obtain antibody A0 with a C-terminal site-specific aldehyde group modification; by genetic recombination, the FGE recognition amino acid sequence is fused to the C-terminus of antibody B, and FGE is added in vitro for catalysis to obtain antibody B0 with a C-terminal site-specific aldehyde group modification; wherein, The gene sequence encoding antibody A is shown in SEQ ID NO.1; the gene sequence encoding antibody B is shown in SEQ ID NO.2; (2) reacting the antibody B0 modified with an aldehyde group at the C-terminus with an aldehyde-reactive homobifunctional linker under freezing conditions to obtain an antibody connected with a single homobifunctional linker, wherein the molar ratio of the antibody modified with an aldehyde group at the C-terminus to the aldehyde-reactive homobifunctional linker is 1:5-15; wherein the linker includes any one of an O-linker with oxyamino groups at both ends, a HZ-PEG-HZ400 linker with hydrazide groups at both ends of PEG400, a HZ-PEG-HZ1000 linker with hydrazide groups at both ends of PEG1000, or a HZ-PEG-HZ2000 linker with hydrazide groups at both ends of PEG2000; (3) reacting the antibody obtained in step (2) with the single homobifunctional linker-linked antibody and the C-terminal site-directed aldehyde-modified antibody A0 obtained in step (1) under freezing conditions to obtain a bispecific antibody complex, wherein the variable regions of the antibody obtained in step (2) and the antibody modified with the C-terminal site-directed aldehyde group are different, and the C-terminal-C-terminal linked bispecific antibody complex refers to an antibody complex with bispecificity obtained by linking two antibodies with different variable regions to a homobifunctional linker at their carboxyl termini; In step (2) and step (3), the freezing condition is -5°C to -30°C; In step (2) and step (3), the pH value of the reaction system reacted under freezing conditions is 4.0-7.5; In step (3), the molar ratio of the antibody obtained in step (2) to the antibody A0 modified with a C-terminal site-specific aldehyde group is 1:1-3.
2. The preparation method according to claim 1, characterized in that In step (2) and step (3), the reaction under freezing conditions refers to placing the reaction mixture at -5°C to -30°C for 2 to 48 hours.
3. The preparation method according to claim 1, characterized in that In step (1), the FGE recognition amino acid sequence contains cysteine-X-proline-X-arginine, where X is any natural amino acid.
4. The preparation method according to claim 1, characterized in that The FGE gene coding sequence is derived from Mycobacterium tuberculosis or humans.
5. The preparation method according to claim 1, characterized in that In step (2), the reaction product after the reaction under freezing conditions is separated by size exclusion chromatography to obtain a single antibody connected to a bifunctional linker.
Citation Information
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