基于多序列比对和机器学习的祖先腈水解酶设计及突变体的应用

By designing and modifying the ancestral nitrile hydrolase using the ASSMD strategy, the problem of insufficient thermal stability of nitrile hydrolases in existing technologies was solved, and the effect of highly efficient catalytic hydrolysis of nitrile compounds was achieved.

CN120636526BActive Publication Date: 2026-07-17JIANGNAN UNIV
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Patent Information

Authority / Receiving Office
CN · China
Patent Type
Patents(China)
Current Assignee / Owner
JIANGNAN UNIV
Filing Date
2024-09-02
Publication Date
2026-07-17

AI Technical Summary

Technical Problem

Existing technologies make it difficult to effectively extract nitrile hydrolases with high thermal stability from extinct extremophiles, and the culture and growth conditions of their host microorganisms are relatively harsh, making it difficult to replicate them in the laboratory.

Method used

Using the ASSMD strategy, ancestral nitrile hydrolases were designed through multiple sequence alignment and machine learning. An ancestral enzyme sequence-structure-molecular dynamics parameter library was constructed, and extreme thermophilic ancestral enzymes were screened out and mutated to improve their thermal stability and enzyme activity.

Benefits of technology

A mutant of an extreme thermophilic nitrile hydrolase that can withstand temperatures up to 90°C was successfully discovered and modified, which significantly improved the enzyme’s thermal stability and catalytic efficiency, making it suitable for the hydrolysis of nitrile compounds under high-temperature conditions.

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Abstract

本发明公开了基于多序列比对和机器学习的祖先腈水解酶设计及突变体的应用,属于酶工程技术领域。本发明设计了一种祖先酶序列‑结构‑分子动力学策略,以获得进化景观中灭绝祖先酶的信息,具体地,收集腈水解酶的序列进行进化树分析获得进化景观,结合祖先酶重构算法获得祖先酶的氨基酸序列,构建祖先酶一级结构序列文库;随后对所有祖先酶的三级结构进行预测获得结构文库;最后对所有祖先酶三级结构进行分子动力学模拟以获得动力学参数文库,通过特定的动力学参数进行筛选。基于此策略本发明获得了能够耐受90℃的祖先腈水解酶,并对其热稳定性进行了进化,得到一系列优势突变体。
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