Apparatus Having a Dynamic Light Scattering Assembly

Abstract

The apparatus includes a process chip (800) and a dynamic light scattering assembly. The process chip (800) can be removably positioned relative to the dynamic light scattering assembly. The process chip (800) includes a fluid chamber (802). The dynamic light scattering assembly includes a body (900), a first optical fiber (1010), and a second optical fiber (1020). The body (900) can be positioned proximate to an outer surface of the process chip (800). A first port in the body directs light emitted by the first optical fiber (1010) through an optically transparent material of the process chip (800) into the fluid chamber (802). The second optical fiber (1020) is oriented obliquely relative to the first optical fiber (1010). The second optical fiber (1020) receives light scattered by particles in the fluid within the fluid chamber (802) in response to the first optical fiber (1010) emitting light into the fluid chamber (802).

Description

[Background technology]

[0001] It should not be assumed that the subject matter discussed in this section is prior art merely as a result of being mentioned in this section. Likewise, it should not be assumed that the problems mentioned in this section, or related to the subject matter provided as background, have been previously recognized in the prior art. The subject matter in this section merely represents different approaches, which themselves may also correspond to implementations of the claimed technology.

[0002] Some currently available techniques for manufacturing and formulating polynucleotide therapeutics (such as mRNA therapeutics) may expose the product to contamination and degradation, and some available centralized production may be too expensive, too slow, or prone to contamination for use in therapeutic formulations containing multiple polynucleotide species. Summary of the Invention

[0003] The development of scalable polynucleotide manufacturing, production of single patient doses, elimination of touch points to limit contamination, input and process tracking to meet clinical manufacturing requirements, and use in point-of-care surgery may advance the use of these therapeutic modalities. Microfluidic instruments and processes may provide advantages in achieving these goals. It may be desirable to measure particle size and / or size distribution within a microfluidic system. Described herein are devices, systems, and methods for measuring particle size and / or size distribution within a microfluidic system to overcome existing challenges and achieve the benefits described herein. Such microfluidic systems may be used for the manufacture and formulation of biomolecule-containing products, such as therapeutics for personalized medicine.

[0004] One implementation relates to an apparatus including a process chip. The process chip includes a first outer surface, a second outer surface, and a fluid chamber positioned between the first outer surface and the second outer surface. The fluid chamber includes a fluid chamber inlet and a fluid chamber outlet, and an optically transparent material positioned between the first outer surface and the fluid chamber. The apparatus further includes a dynamic light scattering assembly. The process chip is removably positioned relative to the dynamic light scattering assembly. The dynamic light scattering assembly includes a body. The body includes a first port and a second port. The body is positioned proximate to the first outer surface. The dynamic light scattering assembly further includes a first optical fiber coupled to the first port of the body. The first optical fiber emits light. The first port directs the light emitted by the first optical fiber through the optically transparent material and into the fluid chamber. The dynamic light scattering assembly further includes a second optical fiber coupled to the second port of the body. A second optical fiber in the second port is oriented obliquely relative to the first optical fiber in the first port, and the second optical fiber receives light scattered by particles in the fluid in the fluid chamber in response to the first optical fiber emitting light into the fluid chamber.

[0005] In some implementations of the device, such as those described in the preceding paragraphs of this summary, the fluid chamber has a cylindrical shape with a circular upper inner surface, a circular lower inner surface, and an interior sidewall extending from the circular upper inner surface to the circular lower inner surface.

[0006] In some implementations of the device, such as those described in any of the preceding paragraphs of this Summary, the fluid chamber inlet is positioned in a region of the interior sidewall near the circular lower inner surface.

[0007] In some implementations of the device, such as those described in any of the preceding paragraphs of this Summary, the fluid chamber outlet is positioned in a region of the interior sidewall near the circular upper inner surface.

[0008] In some implementations of the apparatus, such as those described in any of the preceding paragraphs of this Summary, the process chip further includes a first mixing stage that mixes the first plurality of fluid components to form a first fluid mixture. The fluid chamber inlet receives the first fluid mixture.

[0009] In some implementations of the apparatus, such as those described in any of the preceding paragraphs of this Summary, the first mixing stage includes a first mixing inlet, a second mixing inlet, and a first mixing outlet. The first mixing inlet receives a first fluid component. The second mixing inlet receives a second fluid component. The first mixing outlet outputs the first fluid mixture. The first fluid mixture includes at least the first fluid component and the second fluid component.

[0010] In some implementations of the apparatus, such as those described in any of the preceding paragraphs of this summary, the process chip further includes a first pressure sensor and a second pressure sensor, the first pressure sensor for sensing a pressure of a first fluid component entering the first mixing inlet, and the second pressure sensor for sensing a pressure of a second fluid component entering the second mixing inlet.

[0011] In some implementations of a device, such as those described in any of the preceding paragraphs of this Summary, the device further includes a processor that receives data from the dynamic light scattering assembly, the first pressure sensor, and the second pressure sensor.

[0012] In some implementations of the device, such as those described in any of the preceding paragraphs of this summary, the processor further correlates the data received from the dynamic light scattering assembly, the first pressure sensor, and the second pressure sensor.

[0013] In some implementations of the apparatus, such as those described in any of the preceding paragraphs of this Summary, the process chip further includes an additional fluid channel fluidly coupled to the first mixing outlet.

[0014] In some implementations of devices such as those described in any of the preceding paragraphs of this Summary, the process chip provides fluid communication from the first mixing outlet to either an additional fluid channel, a fluid chamber inlet, or a combination of an additional fluid channel and a fluid chamber inlet.

[0015] In some implementations of the device, such as those described in any of the preceding paragraphs of this summary, the process chip provides fluid communication from the additional fluid channel to the fluid chamber inlet via the first mixing outlet.

[0016] In some implementations of the apparatus, such as those described in any of the preceding paragraphs of this Summary, the process chip further includes a second mixing stage having a second mixing outlet for mixing the second plurality of fluid components to form a second fluid mixture, and the fluid chamber inlet for receiving the second fluid mixture from the second mixing outlet.

[0017] In some implementations of the apparatus, such as those described in any of the preceding paragraphs of this Summary, the process chip further includes at least one valve for regulating fluid flow from the first and second mixing outlets to the fluid chamber inlet such that the fluid chamber inlet selectively receives only one of the first fluid mixture or the second fluid mixture at a time.

[0018] In some implementations of the apparatus, such as those described in any of the preceding paragraphs of this Summary, the process chip further includes a manifold that directs fluid from the first and second mixing outlets to the fluid chamber inlet.

[0019] In some implementations of the apparatus, such as those described in any of the preceding paragraphs of this Summary, the process chip has a square shape with four corners, and the dynamic light scattering assembly is positioned at one of the four corners.

[0020] In some implementations of a device, such as those described in any of the preceding paragraphs of this Summary, the dynamic light scattering assembly further includes a collimator in the first port, the collimator being interposed between the end of the first optical fiber and the first exterior surface.

[0021] In some implementations of the device, such as those described in any of the preceding paragraphs of this summary, the first port further includes a focal volume interposed between the collimator and the first outer surface.

[0022] In some implementations of the apparatus, such as those described in any of the preceding paragraphs of this Summary, the focal volume defines a cone shape.

[0023] In some implementations of devices, such as those described in any of the preceding paragraphs of this Summary, the dynamic light scattering assembly further includes a focusing lens interposed between the collimator and the focal volume.

[0024] In some implementations of a device such as that described in any of the preceding paragraphs of this Summary, the dynamic light scattering assembly further includes an optical filter in the second port, the optical filter being interposed between the end of the second optical fiber and the first exterior surface.

[0025] In some implementations of the device, such as those described in any of the preceding paragraphs of this Summary, the body further defines a channel interposed between the optical filter and the first exterior surface.

[0026] In some implementations of the device, such as those described in any of the preceding paragraphs of this summary, the body includes a tip-facing surface opposite the first exterior surface. The tip-facing surface defines a first opening and a second opening. The first port directs light emitted by the first optical fiber through the first opening to reach the optically transparent material. The second optical fiber receives the scattered light through the second opening.

[0027] In some implementations of devices, such as those described in any of the preceding paragraphs of this summary, the chip-facing surface is spaced a gap distance from the first outer surface.

[0028] In some implementations of the device, such as those described in any of the preceding paragraphs of this Summary, the device further includes a processor that uses at least the data from the dynamic light scattering assembly to determine one or both of a size of particles in the fluid in the fluid chamber, or a size distribution of particles in the fluid in the fluid chamber, using at least the data from the dynamic light scattering assembly.

[0029] In some implementations of devices such as those described in any of the preceding paragraphs of this summary, the processor uses autocorrelation to determine one or both of: a size of particles in the fluid in the fluid chamber using at least data from the dynamic light scattering assembly; or a size distribution of particles in the fluid in the fluid chamber using at least data from the dynamic light scattering assembly.

[0030] In some implementations of the apparatus, such as those described in any of the preceding paragraphs of this Summary, the process tip forms particles that include encapsulated nucleotides.

[0031] In some implementations of the device, such as those described in any of the preceding paragraphs of this Summary, the encapsulated nucleotide comprises encapsulated mRNA.

[0032] In some implementations of the device, such as those described in any of the preceding paragraphs of this Summary, the nucleotide is encapsulated in a surfactant.

[0033] Another embodiment relates to an apparatus including a process chip and a dynamic light scattering assembly. The process chip includes a first exterior surface, a second exterior surface, and a fluid chamber positioned between the first exterior surface and the second exterior surface. The fluid chamber includes a fluid chamber inlet and a fluid chamber outlet. The process chip further includes an optically transparent material positioned between the first exterior surface and the fluid chamber. The process chip further includes a mixing stage. The mixing stage is adapted to mix a plurality of fluid components to form a fluid mixture. The fluid chamber inlet is adapted to receive the fluid mixture. The fluid mixture includes particles. The process chip further includes a plurality of pressure sensors. The plurality of pressure sensors are adapted to sense pressures of the fluid components entering the mixing stage. The process chip is removably positioned relative to the dynamic light scattering assembly. The dynamic light scattering assembly is adapted to emit light into the fluid chamber through the optically transparent material and to receive light scattered from particles in the fluid mixture in the fluid chamber.

[0034] In some implementations of the device, such as those described in the preceding paragraphs of this summary, the device further includes a processor that receives the data from the dynamic light scattering assembly.

[0035] In some implementations of the device, such as those described in any of the preceding paragraphs of this summary, the processor determines one or both of: a size of particles in the fluid in the fluid chamber using at least the data from the dynamic light scattering assembly; or a size distribution of particles in the fluid in the fluid chamber using at least the data from the dynamic light scattering assembly.

[0036] In some implementations of the device, such as those described in any of the preceding paragraphs of this summary, the processor further receives data from a plurality of pressure sensors.

[0037] In some implementations of the device, such as those described in any of the preceding paragraphs of this summary, the processor uses data from at least a number of pressure sensors to determine whether the mixing stage has a flow restriction.

[0038] In some implementations of the device, such as those described in any of the preceding paragraphs of this summary, the processor further correlates the data received from the dynamic light scattering assembly and the multiple pressure sensors.

[0039] Another embodiment relates to an apparatus including a process chip, a first dynamic light scattering assembly, and a second dynamic light scattering assembly. The process chip includes a first exterior surface, a second exterior surface, a first mixing stage, and a second mixing stage. The first mixing stage has a first mixing outlet. The first mixing stage mixes a first plurality of fluid components to form a first fluid mixture and communicates the first fluid mixture out through the first mixing outlet. The first fluid mixture includes particles. The second mixing stage has a second mixing outlet. The second mixing stage mixes a second plurality of fluid components to form a second fluid mixture and communicates the second fluid mixture out through the second mixing outlet. The second fluid mixture includes particles. The first dynamic light scattering assembly is positioned near the first mixing stage. The first dynamic light scattering assembly is for emitting light into the first fluid mixture and receiving light scattered from particles in the first fluid mixture. The second dynamic light scattering assembly is positioned near the second mixing stage. The second dynamic light scattering assembly is for emitting light into the second fluid mixture and receiving light scattered from particles in the second fluid mixture. The process chip is removably positioned relative to the first and second dynamic light scattering assemblies.

[0040] In some implementations of the device, such as those described in the preceding paragraphs of this Summary, the first dynamic light scattering assembly emits light into the first mixing outlet.

[0041] In some implementations of the device, such as those described in any of the preceding paragraphs of this Summary, the second dynamic light scattering assembly emits light into the second mixing outlet.

[0042] In some implementations of the apparatus, such as those described in any of the preceding paragraphs of this Summary, the process chip further includes a manifold that directs fluid from the first and second mixing outlets to a shared outlet channel.

[0043] In some implementations of the apparatus, such as those described in any of the preceding paragraphs of this summary, the process chip further includes a fluid chamber positioned between the first and second outer surfaces. The fluid chamber receives a selected one of the first and second fluid mixtures from the shared outlet channel. The apparatus further includes a third dynamic light scattering assembly. The third dynamic light scattering assembly emits light into the fluid chamber and receives light scattered from particles in the first or second fluid mixture in the fluid chamber.

[0044] In some implementations of an apparatus, such as those described in any of the preceding paragraphs of this Summary, the apparatus further includes a processor that correlates data from the first and second light scattering assemblies with data from a third dynamic light scattering assembly.

[0045] In some implementations of the apparatus, such as those described in any of the preceding paragraphs of this Summary, the process chip further includes one or more valves for selectively metering the flow of fluid from the first and second mixed outlets to the shared outlet channel.

[0046] In some implementations of the apparatus, such as those described in any of the preceding paragraphs of this Summary, the apparatus further includes a plurality of pressure sensors that sense pressures of the first and second fluid components entering the first and second mixing stages.

[0047] In some implementations of a device, such as those described in any of the preceding paragraphs of this Summary, the device further includes a processor that receives data from the first dynamic light scattering assembly, the second dynamic light scattering assembly, and the plurality of pressure sensors.

[0048] In some implementations of the device, such as those described in any of the preceding paragraphs of this summary, the processor further correlates the data from the first and second dynamic light scattering assemblies with data from the multiple pressure sensors.

[0049] Another embodiment relates to a method that includes communicating a fluid through a process chip to produce encapsulated particles in the fluid. The method further includes emitting light toward the encapsulated particles via a first optical fiber, where the encapsulated particles scatter the emitted light, where the emitted light is transmitted through an optically transparent material on a first side of the process chip. The method further includes receiving light scattered from the encapsulated particles, where the received light is transmitted through an optically transparent material on the first side of the process chip, where the received light is received by a second optical fiber oriented obliquely relative to the first optical fiber, where the first and second optical fibers are affixed to a body positioned near the process chip. The method further includes performing an autocorrelation on the received light. The method further includes determining, using at least the autocorrelation, a size of the encapsulated particles, a size distribution of the encapsulated particles, using at least the autocorrelation, or at least using autocorrelation to determine the size and size distribution of the encapsulated particles.

[0050] In some embodiments of methods such as those described in the preceding paragraphs of this Summary, the encapsulated particle comprises an encapsulated nucleotide.

[0051] In some implementations of the methods, such as those described in any of the preceding paragraphs of this Summary, the encapsulated nucleotide comprises an encapsulated mRNA.

[0052] In some embodiments of the methods, such as those described in any of the preceding paragraphs of this Summary, the encapsulated mRNA comprises mRNA encapsulated by at least one delivery vehicle molecule.

[0053] In some implementations of the methods, such as those described in any of the preceding paragraphs of this Summary, at least one delivery vehicle molecule comprises an amino-lipidated peptoid.

[0054] In some implementations of methods, such as those described in any of the preceding paragraphs of this summary, communicating a fluid through a process chip to produce particles encapsulated in the fluid includes communicating two or more fluid components through a mixing assembly to produce the encapsulated particles.

[0055] In some implementations of the method, such as those described in any of the preceding paragraphs of this summary, the method further includes monitoring a pressure of the fluid communicated through the process chip.

[0056] In some implementations of the method, such as those described in any of the preceding paragraphs of this Summary, the method further includes correlating the monitored pressure value with one or both of the determined encapsulated particle size value or the determined encapsulated particle size distribution value.

[0057] In some implementations of the method, such as those described in any of the preceding paragraphs of this summary, the method further includes determining that the monitored pressure value is outside of an acceptable range. The method further includes, in response to determining that the monitored pressure value is outside of the acceptable range, stopping fluid communication through at least a portion of the process chip.

[0058] In some implementations of the method, such as those described in any of the preceding paragraphs of this Summary, the method further includes determining that the determined encapsulated particle size or size distribution is outside of an acceptable range. The method further includes stopping fluid communication through at least a portion of the process chip in response to determining that the determined encapsulated particle size or size distribution is outside of an acceptable range.

[0059] In some implementations of the method, such as those described in any of the preceding paragraphs of this summary, the emitted light is emitted along a first axis. The received light is received along a second axis. The first and second axes intersect at a convergence point. The convergence point is positioned within the process chip.

[0060] In some implementations of the methods, such as those described in any of the preceding paragraphs of this Summary, the first axis and the second axis together define an oblique angle.

[0061] In some implementations of the methods, such as those described in any of the preceding paragraphs of this Summary, the oblique angle is within a range of about 10 degrees to about 45 degrees.

[0062] Another embodiment relates to a method that includes communicating a fluid through a mixing assembly of a process chip to produce a mixture including particles encapsulated in the fluid. The method further includes monitoring a pressure of the fluid communicated through the mixing assembly. The method further includes activating a dynamic light scattering assembly to determine a size or size distribution of the encapsulated particles in the fluid. The dynamic light scattering assembly scatters light from the particles while the fluid is within the process chip. The method further includes correlating the monitored pressure of the fluid with the determined particle size or size distribution.

[0063] In some implementations of the method as described in the preceding paragraphs of this Summary, the method further includes regulating fluid communication through the mixing assembly using at least the monitored pressure.

[0064] In some implementations of the method, such as those described in any of the preceding paragraphs of this Summary, the method further includes determining that the monitored pressure is outside of a predetermined range. Activating the dynamic light scattering assembly is performed in response to determining that the monitored pressure is outside of the predetermined range.

[0065] In some implementations of the method, such as those described in any of the preceding paragraphs of this summary, activating the dynamic light scattering assembly includes emitting light toward the encapsulated particles via a first optical fiber. The encapsulated particles scatter the emitted light. The emitted light is transmitted through an optically transparent material on a first side of the process chip. Activating the dynamic light scattering assembly further includes receiving light scattered from the encapsulated particles. The received light is transmitted through an optically transparent material on the first side of the process chip. The received light is received by a second optical fiber oriented obliquely relative to the first optical fiber. The first and second optical fibers are affixed to a body positioned near the process chip. The method further includes performing an autocorrelation on the received light. The method further includes determining a size or size distribution of the encapsulated particles using at least the autocorrelation.

[0066] Another embodiment relates to a method including communicating a fluid through a first mixing assembly of a process chip to produce a first mixture including encapsulated particles in the fluid. The method further includes communicating the fluid through a second mixing assembly of the process chip to produce a second mixture including encapsulated particles in the fluid. The method further includes emitting light toward the encapsulated particles in the first mixture. The particles in the first mixture scatter the emitted light. The method further includes receiving the scattered light from the encapsulated particles in the first mixture. The method further includes performing an autocorrelation on the received light scattered from the encapsulated particles in the first mixture. The method further includes determining a size or size distribution of the encapsulated particles in the first mixture using at least the autocorrelation on the received light scattered from the encapsulated particles in the first mixture. The method further includes emitting light toward the encapsulated particles in the second mixture. The particles in the second mixture scatter the emitted light. The method further includes receiving the scattered light from the encapsulated particles in the second mixture. The method further includes performing an autocorrelation on the received light scattered from the encapsulated particles in the second mixture. The method further includes determining a size or size distribution of the encapsulated particles in the second mixture using at least the autocorrelation on the received light scattered from the encapsulated particles in the second mixture.

[0067] In some implementations of methods such as those described in the preceding paragraphs of this Summary, emitting light toward the encapsulated particles in the first mixture, receiving light scattered from the encapsulated particles in the first mixture, emitting light toward the encapsulated particles in the second mixture, and receiving light scattered from the encapsulated particles in the second mixture are performed by a single dynamic light scattering assembly.

[0068] In some implementations of the method, such as those described in any of the preceding paragraphs of this Summary, the method further includes selectively communicating the first mixture to a fluid chamber of a single dynamic light scattering assembly. The emitting of light toward the encapsulated particles in the first mixture and receiving the light scattered from the encapsulated particles in the first mixture are performed while the first mixture is in the fluid chamber. The method further includes selectively communicating the second mixture to the fluid chamber. The emitting of light toward the encapsulated particles in the second mixture and receiving the light scattered from the encapsulated particles in the second mixture are performed while the second mixture is in the fluid chamber.

[0069] In some embodiments of the method, such as those described in any of the preceding paragraphs of this Summary, the method further comprises activating a first dynamic light scattering assembly to emit light toward the encapsulated particles in the first mixture and receiving light scattered from the encapsulated particles in the first mixture. The method further comprises activating a second dynamic light scattering assembly to emit light toward the encapsulated particles in the second mixture and receiving light scattered from the encapsulated particles in the second mixture. The second dynamic light scattering assembly is separate from the first dynamic light scattering assembly.

[0070] In some implementations of the method, such as those described in any of the preceding paragraphs of this Summary, the method further includes selectively communicating the first mixture to a fluid chamber of a third dynamic light scattering assembly. The method further includes emitting light toward encapsulated particles in the first mixture while the first mixture is in the fluid chamber. The method further includes receiving light scattered from encapsulated particles in the first mixture while the first mixture is in the fluid chamber. The method further includes selectively communicating the second mixture to the fluid chamber. The method further includes emitting light toward encapsulated particles in the second mixture while the second mixture is in the fluid chamber. The method further includes receiving light scattered from encapsulated particles in the second mixture while the second mixture is in the fluid chamber.

[0071] In some implementations of the method, such as those described in any of the preceding paragraphs of this Summary, the method further includes communicating the first and second mixtures through a manifold, where the first and second mixtures pass through the manifold before reaching the fluid chamber.

[0072] Another implementation relates to an apparatus including a body, a first optical fiber, a focusing lens, a second optical fiber, and an optical filter. The body includes a first port and a second port. The body is positionable proximate to a first exterior surface of a process chip. The first optical fiber is coupled to the first port of the body. The first optical fiber emits light. The first port directs light emitted by the first optical fiber through an optically transparent material of the process chip and into a fluid chamber of the process chip. The focusing lens is supported by the body. The focusing lens is positioned and configured to focus light emitted by the first optical fiber. The second optical fiber is coupled to the second port of the body. The second optical fiber in the second port is oriented obliquely relative to the first optical fiber in the first port. The second optical fiber receives light scattered by particles in a fluid in the fluid chamber in response to the first optical fiber emitting light into the fluid chamber. The optical filter is supported by the body, and the optical fiber is positioned and configured to filter light scattered by particles in the fluid within the fluid chamber.

[0073] In some implementations of the apparatus, such as those described in the preceding paragraphs of this summary, the apparatus further includes a process chip removably positioned relative to the body. The process chip includes a first outer surface, a second outer surface, a fluid chamber, and an optically transparent material. The fluid chamber is positioned between the first outer surface and the second outer surface. The fluid chamber includes a fluid chamber inlet and a fluid chamber outlet. The optically transparent material is positioned between the first outer surface and the fluid chamber.

[0074] In some implementations of the apparatus, such as those described in any of the preceding paragraphs of this Summary, the apparatus further includes a base having a process tip mount for removably receiving a process tip, and a body positioned adjacent to the process tip mount.

[0075] In some implementations of the apparatus, such as those described in any of the preceding paragraphs of this summary, the body orients the first optical fiber along an axis perpendicular to the outer surface of the process tip.

[0076] In some implementations of the device, such as those described in any of the preceding paragraphs of this summary, the body orients the second optical fiber along an axis that is obliquely oriented relative to the outer surface of the process tip.

[0077] Another implementation relates to an apparatus including a process tip mount, a body, a first optical fiber, and a second optical fiber. The process tip mount is adapted to removably receive the process tip. The body includes a first port and a second port. The body is fixedly secured to the process tip mount. The process tip mount is adapted to removably receive the process tip between the body and the process tip mount. The first optical fiber is coupled to the first port of the body. The first optical fiber emits light. The first port directs light emitted by the first optical fiber through a light-transmissive material of the process tip received by the process tip mount and into a fluid chamber of the process tip. The second optical fiber is coupled to the second port of the body. The second optical fiber in the second port is obliquely oriented relative to the first optical fiber in the first port. The second optical fiber receives light scattered by particles in a fluid in the fluid chamber in response to the first optical fiber emitting light into the fluid chamber.

[0078] In some implementations of the apparatus, such as those described in the preceding paragraphs of this summary, the apparatus further includes a process tip removably received within the process tip mount. The process tip includes a first outer surface, a second outer surface, a fluid chamber, and an optically transparent material. The fluid chamber is positioned between the first outer surface and the second outer surface. The fluid chamber includes a fluid chamber inlet and a fluid chamber outlet. The optically transparent material is positioned between the first outer surface and the fluid chamber.

[0079] In some implementations of the device, such as those described in any of the preceding paragraphs of this summary, the process tip is configured to form a therapeutic composition.

[0080] In some implementations of the device, such as those described in any of the preceding paragraphs of this Summary, the therapeutic composition includes a fluid containing particles.

[0081] In some implementations of the device, such as those described in any of the preceding paragraphs of this Summary, the first port directs light emitted by the first optical fiber through the optically transparent material of the process chip to reach the fluid of the therapeutic composition.

[0082] In some implementations of the device, such as those described in any of the preceding paragraphs of this Summary, the second optical fiber receives light scattered by particles of the therapeutic composition.

[0083] In some implementations of the device, such as those described in any of the preceding paragraphs of this Summary, the device further includes a processor that determines one or both of: a size of particles in the therapeutic composition using at least the light scattered by the particles of the therapeutic composition; or a size distribution of particles in the therapeutic composition using at least the light scattered by the particles of the therapeutic composition.

[0084] Another implementation relates to an apparatus including a process chip, a dynamic light scattering assembly, and a processor. The process chip includes a fluid chamber and a light-transmissive material adjacent to the fluid chamber. The fluid chamber includes a fluid chamber inlet and a fluid chamber outlet. The process chip is removably positioned relative to the dynamic light scattering assembly. The dynamic light scattering assembly directs light through the light-transmissive material and into the fluid chamber. The dynamic light scattering assembly further receives light scattered by particles in the fluid in the fluid chamber in response to the first optical fiber emitting light into the fluid chamber, thereby capturing light scattering data. The processor determines the viscosity of the fluid in the fluid chamber based on the captured light scattering data. The processor further determines one or both of a size or a size distribution of the particles in the fluid based on the captured light scattering data.

[0085] In some implementations of the device, such as those described in the preceding paragraphs of this Summary, the processor further includes a first channel and a second channel. The fluid chamber inlet is configured to receive the first fluid from the first channel. The fluid chamber inlet is further configured to receive the second fluid from the second channel.

[0086] In some implementations of devices, such as those described in any of the preceding paragraphs of this Summary, the first fluid comprises a therapeutic composition.

[0087] In some implementations of the device, such as those described in any of the preceding paragraphs of this Summary, the therapeutic composition comprises at least a portion of the particles.

[0088] In some implementations of the device, such as those described in any of the preceding paragraphs of this Summary, the particles of the therapeutic composition include mRNA.

[0089] In some implementations of the apparatus, such as those described in any of the preceding paragraphs of this Summary, the second fluid includes at least a portion of the particles.

[0090] In some implementations of the device, such as those described in any of the preceding paragraphs of this Summary, the particles of the second fluid include beads.

[0091] In some implementations of the device, such as those described in any of the preceding paragraphs of this Summary, the first fluid comprises a therapeutic composition. The therapeutic composition comprises particles.

[0092] In some implementations of a device, such as those described in any of the preceding paragraphs of this Summary, the particles of the therapeutic composition have a first diameter and the beads have a second diameter that is different from the first diameter.

[0093] In some implementations of the device, such as those described in any of the preceding paragraphs of this Summary, the second diameter is larger than the first diameter.

[0094] In some implementations of the apparatus, such as those described in any of the preceding paragraphs of this Summary, the first fluid comprises a first type of particles and the second fluid comprises a second type of particles.

[0095] In some implementations of the device, such as those described in any of the preceding paragraphs of this summary, the processor determines one or both of the size or size distribution of the first type of particles in the first fluid based on light scattered by the first and second types of particles.

[0096] In some implementations of the apparatus, such as those described in any of the preceding paragraphs of this Summary, the second type of particles has a known size.

[0097] In some implementations of devices, such as those described in any of the preceding paragraphs of this Summary, the second fluid includes a diluent.

[0098] In some implementations of the apparatus, such as those described in any of the preceding paragraphs of this summary, the process chip is configured to selectively add discrete amounts of diluent sequentially to the first fluid.

[0099] In some implementations of the apparatus, such as those described in any of the preceding paragraphs of this summary, the process chip includes at least one valve for selectively controlling the delivery of the diluent to the first fluid.

[0100] In some implementations of the apparatus, such as those described in any of the preceding paragraphs of this summary, the process chip further includes at least one pump that selectively drives the movement of the diluent.

[0101] In some implementations of an apparatus such as that described in any of the preceding paragraphs of this summary, a processor: The autocorrelation of the captured light scattering data is tracked during a sequence of adding discrete amounts of the diluent to the first fluid, and the processor is also configured to determine one or both of a size or a size distribution of the particles in the fluid based on the tracked autocorrelation.

[0102] In some implementations of the apparatus, such as those described in any of the preceding paragraphs of this summary, the process chip further includes a mixing chamber for mixing the diluent with the first fluid.

[0103] In some implementations of the device, such as those described in any of the preceding paragraphs of this Summary, the mixing chamber is positioned adjacent to the fluid chamber.

[0104] In some implementations of the apparatus, such as those described in any of the preceding paragraphs of this Summary, the process chip further includes a first pump and a second pump configured to alternately operate to thereby drive the combination of the diluent and the first fluid back and forth through the mixing chamber.

[0105] Another embodiment relates to a method that includes communicating a fluid mixture through a process chip, the fluid mixture includes particles. The method further includes emitting light toward the fluid mixture through a first optical fiber. The particles in the fluid mixture scatter the emitted light. The method further includes receiving light scattered from the particles in the fluid mixture. The received light is received by a second optical fiber oriented at an angle to the first optical fiber. The first and second optical fibers are affixed to a body positioned near the process chip. The method further includes performing an autocorrelation on the received light. The method further includes determining a viscosity of the fluid mixture using at least the autocorrelation. The method further includes determining any of: a size of the particles in the fluid mixture using at least the autocorrelation; a size distribution of the particles in the fluid mixture using at least the autocorrelation; or a size and size distribution of the particles in the fluid mixture using at least the autocorrelation.

[0106] In some implementations of the methods, such as those described in the preceding paragraphs of this summary, communicating the fluid through the process chip includes communicating a first fluid component, the first fluid component including at least a portion of the particles. Communicating the fluid through the process chip further includes communicating a second fluid component. Communicating the fluid through the process chip further includes mixing the first and second fluid components together to form a fluid mixture.

[0107] In some implementations of the methods, such as those described in any of the preceding paragraphs of this Summary, the particles of the first fluid component include therapeutic particles.

[0108] In some implementations of the methods, such as those described in any of the preceding paragraphs of this Summary, the therapeutic particle comprises mRNA.

[0109] In some embodiments of the methods, such as those described in any of the preceding paragraphs of this Summary, the mRNA is encapsulated in a delivery vehicle.

[0110] In some implementations of the methods, such as those described in any of the preceding paragraphs of this Summary, the second fluid component includes at least a portion of the particles.

[0111] In some implementations of the methods, such as those described in any of the preceding paragraphs of this Summary, the particles of the second fluid component include beads.

[0112] In some implementations of methods such as those described in any of the preceding paragraphs of this Summary, particles of the first fluid component have a first diameter and particles of the second fluid component have a second diameter that is different from the first diameter.

[0113] In some implementations of the methods, such as those described in any of the preceding paragraphs of this Summary, the second diameter is greater than the first diameter.

[0114] In some implementations of methods such as those described in any of the preceding paragraphs of this Summary, the particles of the first fluid component include a first type of particles, and the particles of the second fluid component include a second type of particles that are different from the first type of particles.

[0115] In some implementations of the methods, such as those described in any of the preceding paragraphs of this Summary, receiving light scattered from particles in the fluid mixture includes receiving light scattered by particles of a first fluid component, and receiving light scattered from particles in the fluid mixture further includes receiving light scattered by particles of a second fluid component.

[0116] In some implementations of methods such as those described in any of the preceding paragraphs of this Summary, determining either the size of particles in the fluid mixture using at least autocorrelation, the size distribution of particles in the fluid mixture using at least autocorrelation, or the size and size distribution of particles in the fluid mixture using at least autocorrelation includes determining either the size of particles of a first fluid component using at least autocorrelation, the size distribution of particles of the first fluid component using at least autocorrelation, or the size and size distribution of particles of the first fluid component using at least autocorrelation.

[0117] In some implementations of the methods, such as those described in any of the preceding paragraphs of this Summary, the second fluid component includes a diluent.

[0118] In some implementations of the method, such as those described in any of the preceding paragraphs of this Summary, communicating the fluid mixture through the process chip includes: The method further includes sequentially adding discrete amounts of a diluent to the first fluid component.

[0119] In some implementations of the method, such as those described in any of the preceding paragraphs of this Summary, the method further includes repeating the emitting of light, receiving light, and performing autocorrelation each time a discrete amount of diluent is sequentially added to the first fluid component.

[0120] In some implementations of the method, such as those described in any of the preceding paragraphs of this Summary, the method further includes tracking the autocorrelation through each iteration of emitting light, receiving light, and performing autocorrelation each time a discrete amount of diluent is sequentially added to the first fluid component.

[0121] In some implementations of the methods, such as those described in any of the preceding paragraphs of this Summary, determining the viscosity of the fluid mixture using at least the autocorrelation includes determining the viscosity of the fluid mixture using the tracked autocorrelation.

[0122] In some implementations of methods such as those described in any of the preceding paragraphs of this Summary, determining either the size of particles in the fluid mixture using at least the autocorrelation, the size distribution of particles in the fluid mixture using at least the autocorrelation, or the size and size distribution of particles in the fluid mixture using at least the autocorrelation includes determining either the size of particles in the fluid mixture using the tracked autocorrelation, the size distribution of particles in the fluid mixture using the tracked autocorrelation, or the size and size distribution of particles in the fluid mixture using the tracked autocorrelation.

[0123] In some implementations of the methods, such as those described in any of the preceding paragraphs of this Summary, the discrete amount of diluent added to the first fluid component is the same amount of diluent each time the discrete amount of diluent is sequentially added to the first fluid component.

[0124] In some implementations of methods such as those described in any of the preceding paragraphs of this summary, mixing the first and second fluid components together to form the fluid mixture includes alternately operating at least two pumps to drive the first and second fluid components back and forth through a mixing chamber of the process chip.

[0125] It should be understood that all combinations of the foregoing concepts, and additional concepts discussed in more detail below (provided that such concepts are not mutually inconsistent), are contemplated as being part of the inventive subject matter disclosed herein and achieving the benefits / advantages described herein. In particular, all combinations of claimed subject matter appearing at the end of this disclosure are contemplated as being part of the inventive subject matter disclosed herein. [Brief description of the drawings]

[0126] The details of one or more implementations are set forth in the accompanying drawings and the description below. Other features, aspects, and advantages will become apparent from the description, drawings, and claims. [Figure 1] FIG. 1 shows a schematic diagram of an example of a system including a microfluidic processing chip. [Diagram 2] 2 shows an exploded perspective view of example components of the system of FIG. 1. [Diagram 3] 2 shows a top view of an example of a process chip that can be incorporated into the system of FIG. 1. [Figure 4A] 4 shows a cross-sectional side view of the process chip of FIG. 3 in a first operating state. [Figure 4B] 4 shows a cross-sectional side view of the process chip of FIG. 3 in a second operating state. [Figure 4C] 4 shows a cross-sectional side view of the process chip of FIG. 3 in a third operating state. [Figure 4D] 4 shows a cross-sectional side view of the process chip of FIG. 3 in a fourth operating state. [Figure 4E] 4 shows a cross-sectional side view of the process chip of FIG. 3 in a fifth operating state. [Figure 4F] 4 shows a cross-sectional side view of the process chip of FIG. 3 in a sixth operating state. [Diagram 5] 4 shows a perspective view of one example of a mixing stage that can be incorporated into the process chip of FIG. 3. [Figure 6] 1 shows a top view of a portion of an example process chip incorporating a mixing stage. [Figure 7A] 4 shows a schematic cross-sectional view of an example of a pressure sensing stage that can be incorporated into the process chip of FIG. 3 with the elastic layer in an undeflected state. [Figure 7B] FIG. 7B shows a schematic cross-sectional view of the pressure sensing stage of FIG. 7A with the elastic layer in a deflected state; [Figure 8] 7B shows a top view of a portion of the pressure sensing stage of FIG. 7A. [Figure 9] FIG. 1 shows a perspective view of an exemplary assembly including a process chip and a body for a dynamic light scattering stage. [Figure 10] FIG. 10 shows a top view of the assembly of FIG. [Figure 11] FIG. 10 shows a side view of the assembly of FIG. [Figure 12] 10 shows an enlarged top view of the mixing assembly in the process chip of FIG. 9. [Figure 13] 10 shows an enlarged plan view of the dynamic light scattering chamber in the process chip of FIG. 9. [Figure 14] FIG. 14 shows a perspective view of the dynamic light scattering chamber of FIG. 13. [Figure 15] 14 shows another perspective view of the dynamic light scattering chamber of FIG. 13. [Figure 16] A perspective view of the main body of the dynamic light scattering stage of the assembly of FIG. 9 is shown, along with a schematic diagram of the associated optical components. [Figure 17] 10 shows a perspective view of the main body of the dynamic light scattering stage of the assembly of FIG. 9 with the collimator and optical filter separated from the main body. [Figure 18] FIG. 10 shows a top view of the main body of the dynamic light scattering stage of the assembly of FIG. [Figure 19] FIG. 10 shows a bottom view of the main body of the dynamic light scattering stage of the assembly of FIG. [Figure 20] 20 shows a cross-sectional view of the main body of the dynamic light scattering stage of the assembly of FIG. 9 taken along line 20-20 of FIG. [Figure 21] 10 shows a graph plotting an example of an autocorrelation function associated with the use of a multimode optical fiber in the dynamic light scattering stage of the assembly of FIG. 9. [Figure 22] 10 shows a graph plotting an example of an autocorrelation function associated with the use of a single mode optical fiber in the dynamic light scattering stage of the assembly of FIG. 9. [Figure 23] A perspective view of an assembly including a process chip and several bodies of several corresponding dynamic light scattering stages is shown. [Figure 24] FIG. 24 shows a top view of the assembly of FIG. 23. [Diagram 25] 1 shows a perspective view of a measurement stage that can be integrated into a process chip. [Figure 26] 26 shows a flow chart illustrating an example of a process for measuring viscosity in a process chip using the measurement stage of FIG. 25. [Figure 27] 27 shows a graph plotting an example of an autocorrelation function associated with running the process of FIG. 26 through the measurement stage of FIG. 25. [Figure 28] 26 shows a flow chart illustrating another example of a process for measuring viscosity in a process chip using the measurement stage of FIG. 25. [Figure 29] 27 shows a graph plotting an example of gamma values ​​that may be obtained during execution of the process of FIG. 26 through the measurement stage of FIG. 25. DETAILED DESCRIPTION OF THE PREFERRED EMBODIMENTS

[0127] In some aspects, devices and methods for processing therapeutic polynucleotides are disclosed herein. In particular, these devices and methods can be closed-circuit devices and methods configured to minimize or eliminate manual manipulation during operation. The closed-circuit devices and methods can provide a nearly completely sterile environment, and the components can provide a sterile pathway for processing from the initial input (e.g., template) to the output (e.g., formulated therapeutic). Material inputs to the device (e.g., nucleotides, and any chemical components) can be sterile and can be loaded into the system without the need for substantially any manual interaction.

[0128] The devices and methods described herein can produce therapeutics with very high reproducibility and very rapid cycle times. The devices described herein are configured to provide synthesis, purification, dialysis, formulation, and concentration of one or more therapeutic compositions in a single integrated device. Alternatively, one or more of these processes can be performed in two or more devices as described herein. In some scenarios, the therapeutic composition includes a therapeutic polynucleotide. Such a therapeutic polynucleotide can include, for example, ribonucleic acid or deoxyribonucleic acid. The polynucleotide can include only natural nucleotide units or can include any type of synthetic or semi-synthetic nucleotide units. All or part of the processing steps can be performed within a continuous fluid processing pathway, which can be configured as one or a series of consumable microfluidic pathway devices, also referred to in some cases herein as process chips or biochips (although chips do not necessarily have to be used in bio-related applications). This can allow patient-specific therapeutics to be synthesized, including compounding patient-specific therapeutics, at the point-of-care (e.g., hospitals, clinics, pharmacies, etc.).

[0129] I. Overview of the system including the microfluidic process chip FIG. 1 shows an example of various components that may be incorporated into a system (100). The system (100) in this example includes a housing (103) that encloses a seating mount (115) that may removably hold one or more microfluidic process chips (111). In other words, the system (100) includes components configured to removably house the process chip (111), which itself defines one or more microfluidic channels or fluid paths. Components of the system (100) (e.g., within the housing (103)) that fluidly interact with the process chip (111) may include fluid channels or paths that are not necessarily considered microfluidic (e.g., such fluid channels or paths are larger than the microfluidic channels or fluid paths within the process chip (111)). In some versions, the process chip (111) is provided and utilized as a single-use device, and the remainder of the system (100) is reusable. The housing (103) may be in the form of a chamber, enclosure, etc., with an opening that may be closed (e.g., via a lid or door, etc.) to thereby seal the interior. The housing (103) may enclose a temperature regulator and / or be configured to be enclosed within a temperature-regulated environment (e.g., a refrigeration unit, etc.). The housing (103) may form a sterility barrier. In some variations, the housing (103) may form a humidified or humidity-controlled environment. Additionally or alternatively, the system (100) may be positioned within a cabinet (not shown). Such a cabinet may provide a temperature-regulated (e.g., refrigerated) environment. Such a cabinet may also provide air filtration and airflow management to facilitate reagents being kept at a desired temperature throughout the manufacturing process. Additionally, such a cabinet may include UV lamps for sterilization of the process chip (111) and other components of the system (100). Various suitable features that may be incorporated into a cabinet housing system (100) will become apparent to those of ordinary skill in the art in view of the teachings herein.

[0130] The seating mount (115) may be configured to secure the process tip (111) using one or more pins or other components configured to hold the process tip (111) in a fixed and predefined orientation. Thus, the seating mount (115) may facilitate the process tip (111) being held in a proper position and orientation relative to other components of the system (100). In this embodiment, the seating mount (115) is configured to hold the process tip (111) in a horizontal orientation such that the process tip (111) is parallel to the ground.

[0131] In some variations, the thermal control (113) may be located adjacent to the seating mount (115) and modulate the temperature of any process chip (111) mounted within the seating mount (115). The thermal control (113) may include a thermoelectric component (e.g., a Peltier element, etc.) and / or one or more heat sinks to control the temperature of all or a portion of any process chip (111) mounted within the seating mount (115). In some variations, two or more thermal control (113) may be included, such as to separately regulate the temperature of different areas of one or more areas of the process chip (111). The thermal control (113) may include one or more thermal sensors (e.g., thermocouples, etc.) that may be used for feedback control of the process chip (111) and / or the thermal control (113).

[0132] As shown in FIG. 1, the fluid interface assembly (109) couples the process chip (111) to a pressure source (117), thereby providing one or more paths for a fluid (e.g., gas) at positive or negative pressure to be communicated from the pressure source (117) to one or more interior regions of the process chip (111), as described in more detail below. Although only one pressure source (117) is shown, the system (100) may include two or more pressure sources (117). In some scenarios, pressure may be generated by one or more sources other than the pressure source (117). For example, one or more vials or other fluid sources in the reagent storage frame (107) may be pressurized. Additionally or alternatively, reactions and / or other processes performed on the process chip (111) may generate additional fluid pressures. In this embodiment, the fluid interface assembly (109) also couples the process chip (111) to the reagent storage frame (107), thereby providing one or more pathways for communicating liquid reagents, etc. from the reagent storage frame (107) to one or more interior regions of the process chip (111), as described in more detail below.

[0133] In some versions, pressurized fluid (e.g., gas) from at least one pressure source (117) reaches the fluid interface assembly (109) via the reagent storage frame (107), such that the reagent storage frame (107) includes one or more components interposed in the fluid path between the pressure source (117) and the fluid interface assembly (109). In some versions, the one or more pressure sources (117) are directly coupled to the fluid interface assembly, such that positive pressure fluid (e.g., positive pressure gas) or negative pressure fluid (e.g., suction gas or other negative pressure gas) bypasses the reagent storage frame (107) to reach the fluid interface assembly (109). Regardless of whether the fluid interface assembly (109) intervenes in the fluid path between the pressure source (117) and the fluid interface assembly (109), the fluid interface assembly (109) may be removably coupled to the remainder of the system (100) such that at least a portion of the fluid interface assembly (109) may be removed for sterilization between uses. As described in more detail below, the pressure source (117) may selectively pressurize one or more chamber regions on the process chip (111). Additionally, or in the alternative, the pressure source may also selectively pressurize one or more vials or other fluid storage containers held by the reagent storage frame (107).

[0134] The reagent storage frame (107) is configured to accommodate a plurality of fluid sample holders, each of which may hold a fluid vial or cassette configured to hold a reagent (e.g., nucleotides, solvents, water, etc.) for delivery to the process chip (111). In some versions, one or more of the fluid vials, cassettes, or other storage containers in the reagent storage frame (107) may be configured to receive products from the interior of the process chip (111). Additionally or alternatively, the second process chip (111) may receive products from the interior of the first process chip (111) such that one or more fluids are transferred from one process chip (111) to another process chip (111). In some such scenarios, the first process chip (111) may perform a first dedicated function (e.g., synthesis, etc.) and the second process chip (111) performs a second dedicated function (e.g., encapsulation, etc.). The reagent storage frame (107) of this example includes multiple pressure lines and / or manifolds configured to divide one or more pressure sources (117) into multiple pressure lines that can be applied to the process chips (111). Such pressure lines can be controlled independently or collectively (in subcombinations).

[0135] The fluid interface assembly (109) may include multiple fluid and / or pressure lines, where each such line may include a biased (e.g., spring-loaded) holder or tip that individually and independently drives each fluid and / or pressure line to the process chip (111) when the process chip (111) is held in the seating fixture (115). Any associated tubing (e.g., fluid and / or pressure lines) may be part of and / or connected to the fluid interface assembly (109). In some versions, each fluid line comprises flexible tubing that connects between the reagent storage frame (107) and the process chip (111) via connectors that couple vials to the tubing in a locking engagement (e.g., ferrules). In some versions, the ends of the fluid / pressure lines can be configured to seal against the process chip (111), for example, at corresponding sealing ports formed in the process chip (111), as described below. In this example, the connections between the pressure source (117) and the process chip (111), and the connections between the vials in the reagent storage frame (107) and the process chip (111) all form sealed, closed pathways that are isolated when the process chip (111) is seated in the seating fixture (115). Such sealed, closed pathways can provide protection against contamination when processing therapeutic polynucleotides.

[0136] The vials in the reagent storage frame (107) may be pressurized (e.g., pressures greater than 1 atm, such as 2 atm, 3 atm, 5 atm, or more). In some versions, the vials are pressurized by a pressure source (117). Thus, negative or positive pressures may be applied. For example, the fluid vials may be pressurized to about 1 to about 20 psig (e.g., 5 psig, 10 psig, etc.). Alternatively, a vacuum (e.g., about -7 psig or about 7 psia) may be applied to draw the fluid back into the vial (e.g., the vial serving as a reservoir) at the end of the process. The fluid vials may be driven at a lower pressure than the pneumatic valves, as described below, which may prevent or reduce leakage. In some variations, the pressure differential between the fluid valves and the pneumatic valves may be about 1 psi to about 25 psi (e.g., about 3 psi, about 5 psi, 7 psi, 10 psi, 12 psi, 15 psi, 20 psi, etc.).

[0137] The system (100) of this embodiment further includes a magnetic field applicator (119) configured to generate a magnetic field in the region of the process chip (111). The magnetic field applicator (119) may include a movable head operable to move the magnetic field, thereby selectively isolating products attached to the magnetic capture beads in vials or other storage containers in the reagent storage frame (107).

[0138] The system (100) of this embodiment further includes one or more sensors (105). In some versions, such sensors (105) include one or more cameras and / or other types of optical sensors. Such sensors (105) may sense one or more of bar codes, fluid levels in fluid vials held in the reagent storage frame (107), fluid movement in a process chip (111) mounted in the seating fixture (115), and / or other optically detectable conditions. In versions in which the sensor (105) is used to sense bar codes, such bar codes may be included on vials in the reagent storage frame (107) such that the sensor (105) may be used to identify vials in the reagent storage frame (107). In some versions, a single sensor (105) is positioned and configured to simultaneously view such bar codes on vials in the reagent storage frame (107), fluid levels in vials in the reagent storage frame (107), fluid movement in a process chip (111) mounted in the seating fixture (115), and / or other optically detectable conditions. In some other versions, two or more sensors (105) are used to view such conditions. In some such versions, different sensors (105) are positioned and configured to view corresponding optically detectable conditions separately, such that a sensor (105) may be dedicated to a particular corresponding optically detectable condition.

[0139] In versions in which the sensor (105) includes at least one optical sensor, visual / optical markers may be used to estimate yield. For example, fluorescence may be used to detect process yield or residual material by tagging with a phosphor. Additionally or alternatively, dynamic light scattering (DLS) may be used to measure particle size distribution within a portion of the process chip (111), such as a mixed portion of the process chip (111). In some variations, the sensor (105) may provide measurements using one or two optical fibers to carry light (e.g., laser light) into the process chip (111) and detect light signals emerging from the process chip (111). In versions in which the sensor (105) optically detects process yield or residual material, etc., the sensor (105) may be configured to detect visible light, fluorescence, ultraviolet (UV) absorbance signals, infrared (IR) absorbance signals, and / or any other suitable type of optical feedback.

[0140] In versions in which the sensor (105) includes at least one optical sensor configured to capture video images, such sensor (105) may record at least some activity on the process chip (111). For example, an entire run for synthesizing and / or processing a material (e.g., a therapeutic RNA) may be recorded by one or more video sensors (105), including a video sensor (105) that may visualize (e.g., from above) the process chip (111). The process on the process chip (111) may be visually tracked, and this video recording may be retained for later quality control and / or processing. Thus, the video recording of the process may be saved, stored, and / or transmitted for subsequent review and / or analysis. Additionally, as described in more detail below, the video may be used as a real-time feedback input that may use at least visually observable conditions captured in this video to affect the process.

[0141] The system (100) of the present embodiment is controlled by a controller (121). The controller (121) may include one or more processors, one or more memories, and various other electrical components, as will be apparent to one of ordinary skill in the art in view of the teachings herein. In some versions, one or more components of the controller (121) (e.g., one or more processors, etc.) may be embedded within the system (100) (e.g., housed within the housing (103)). Additionally or alternatively, one or more components of the controller (121) (e.g., one or more processors, etc.) may be removably attached to or removably connected to other components of the system (100). Thus, at least a portion of the controller (121) may be removable. Furthermore, at least a portion of the controller (121) may be separate from the housing (103) in some versions.

[0142] Control by the controller (121) may include, among other tasks, actuating the pressure source (117) to apply pressure through the process chip (111) to drive fluid movement. The controller (121) may be completely or partially outside the housing (103) or completely or partially inside the housing (103). The controller (121) may be configured to receive user input via a user interface (123) of the system (100) and provide output to a user via the user interface (123). In some versions, the controller (121) is fully automated to the point that no user input is required. In some such versions, the user interface (123) may only provide output to a user. The user interface (123) may include a monitor, a touch screen, a keyboard, and / or any other suitable features. The controller (121) may coordinate processes including moving one or more fluids onto the process chip (111), mixing one or more fluids onto the process chip (111), adding one or more components to the process chip (111), metering fluids within the process chip (111), adjusting the temperature of the process chip (111), applying a magnetic field (e.g., when using magnetic beads), and the like. The controller (121) may receive real-time feedback from the sensors (105) and execute control algorithms according to such feedback from the sensors (105). Such feedback from the sensors (105) may include, but need not be limited to, an identification of a reagent within a vial within the reagent storage frame (107), a detected fluid level within a vial within the reagent storage frame (107), a detected movement of a fluid within the process chip (111), fluorescence of a fluorophore within a fluid within the process chip (111), and the like. The controller (121) may include software, firmware, and / or hardware.The controller (121) may also communicate with a remote server, for example, to track the operation of the device, to sort materials (e.g., components such as nucleotides, the process chip (111), etc.), and / or to download protocols.

[0143] FIG. 2 shows examples of specific forms that the various components of the system (100) may take. Specifically, FIG. 2 shows a reagent storage frame (150), a fluid interface assembly (152), a seating mount (154), a thermal control (156), and a process chip (200). The reagent storage frame (150), the fluid interface assembly (152), the seating mount (154), the thermal control (156), and the process chip (200) of this example may be configured and operable similarly to the reagent storage frame (107), the fluid interface assembly (109), the seating mount (115), the thermal control (113), and the process chip (111), respectively, described above. These components are secured to a base (180). A set of rods (182) support the reagent storage frame (150) on the fluid interface assembly (152).

[0144] As shown in FIG. 2, a set of optical sensors (160) are positioned at four respective locations along the base (180). The optical sensors (160) may be configured and operable as the sensors (105) described above. The optical sensors (160) may include off-the-shelf cameras or any other suitable type of optical sensor. The optical sensors (160) are positioned such that fluid vials held in the reagent storage frame (150) are within the field of view of one or more of the optical sensors (160). In addition, the process chip (200) is within the field of view of one or more of the optical sensors (160). Each optical sensor (160) is movably secured (e.g., in a gantry arrangement) to the base (180) via a corresponding rail (184) such that each optical sensor (160) is configured to translate laterally along each corresponding rail (184). A linear actuator 186 is affixed to each optical sensor 160 and is operable to drive lateral translation of each optical sensor 160 along a corresponding rail 184. Each actuator 186 may be in the form of a drive belt, drive chain, drive cable, or any other suitable type of structure. The controller 121 may drive the movement of the actuator 186. The optical sensors 160 may be moved along the rail 184 during operation of the system 100 to facilitate viewing of appropriate areas of vials within the reagent storage frame 150 and / or the process chip 200. In some scenarios, the optical sensors 160 move in unison along the corresponding rail 184. In some other scenarios, the optical sensors 160 move independently along the corresponding rail 184.

[0145] In FIG. 2, the optical sensor (160) is shown as being mounted to the base (180), however, the optical sensor (160) may be positioned elsewhere in the system (100) in addition to or instead of being mounted to the base (180). For example, some versions of the reagent storage frame (107) may include one or more optical sensors (160) positioned and configured to provide an overhead field of view. In some such versions, such optical sensors (160) may be mounted to rails, movable cantilever arms, or other structures that allow such optical sensors (160) to be repositioned during operation of the system (100). Other suitable locations where the optical sensor (160) may be positioned will be apparent to those skilled in the art in view of the teachings herein. Although not shown, the system (100) may also include one or more light sources (e.g., electroluminescent panels, etc.) to provide illumination to assist optical sensing by the optical sensor (160).

[0146] In some versions, one or more mirrors are used to facilitate visualization of components of the system (100) by the optical sensor (160). Such mirrors may enable the optical sensor (160) to view components of the system (100) that may not otherwise be within the field of view of the sensor (160). Such mirrors may be placed directly adjacent to the optical sensor (160). Additionally, or alternatively, such mirrors may be placed adjacent to one or more components of the system (100) that are viewed by the optical sensor (160).

[0147] In using the system 100, an operator may select a protocol to run (e.g., from a library of pre-defined protocols) or a user may input a new protocol (or modify an existing protocol) via the user interface 123. The protocol may cause the controller 121 to instruct the operator on what type of process chip 111 to use, what the contents of the vials in the reagent storage frame 107 should be, and where to place the vials in the reagent storage frame 107. The operator may load the process chip 111 into the seating fixture 115 and load the desired reagent vials and unload the vials into the reagent storage frame 107. The system 100 may verify the presence of the desired peripherals, identify the process chip 111, and scan the identifiers (e.g., bar codes) of each reagent and product vial in the reagent storage frame 107 to facilitate matching the vials to the reagent table of the selected protocol. After verifying the starting materials and equipment, the controller (121) can execute the protocol, during which valves and pumps are actuated to deliver reagents, reagents are mixed, temperatures are controlled, reactions occur, measurements are taken, and products are pumped into destination vials in the reagent storage frame (107), as described in more detail below.

[0148] II. Process Chip Examples 3 and 4A-4F show an example of a process chip (200) in more detail. The process chip (200), in combination with the rest of the system (100), can be utilized to provide in vitro synthesis, purification, concentration, formulation, and analysis of therapeutic compositions, including, but not limited to, therapeutic polynucleotides. As shown in FIG. 3, the process chip (200) of this example includes a plurality of fluid ports (220). Each fluid port (220) has an associated fluid channel (222) formed within the process chip (200) such that fluid communicated within the fluid port (220) flows through the corresponding fluid channel (222). As described in more detail below, each fluid port (220) is configured to receive fluid from a corresponding fluid line (206) from the fluid interface assembly (109). In this embodiment, each fluid channel (222) leads to a valve chamber (224) that is operable to selectively block or allow fluid from the corresponding fluid channel (222) to be communicated further along the process chip (200), as described in more detail below.

[0149] Also, as shown in FIG. 3, the process chip (200) of this example includes multiple additional chambers (230, 250, 270) that can be used to serve different purposes during the process of producing the therapeutic compositions described herein. By way of example only, such additional chambers (230, 250, 270) can be used to provide synthesis, purification, dialysis, preparation, and concentration of one or more therapeutic compositions, or can be used to perform any other suitable function. Fluid can be communicated from one chamber (230) to another chamber (230) via a fluid connector (232). In some versions, the fluid connector (232) is operable like a valve, between an open and closed state (e.g., similar to the valve chamber (224)). In some other versions, the fluid connector (232) remains open throughout the process of making the therapeutic composition. In this example, the chamber (230) is used to provide synthesis of polynucleotides, but the chamber (230) can alternatively serve any other suitable purpose.

[0150] In the example shown in FIG. 3, another valve chamber (234) is interposed between one of the chambers (230) and one of the chambers (250), so that fluid can be selectively communicated from the chambers (230) to the chambers (250). The chambers (250) are provided in pairs and coupled to one another such that the process chip (200) can communicate fluid back and forth between the chambers (250). In this embodiment, a pair of chambers (250) is provided, but any other suitable number of chambers (250) can be used, including only one chamber (250) or three or more chambers (250). The chambers (250) can be used to provide purification of the fluid and / or can serve any of the various other purposes described herein and can have any suitable configuration. In versions in which the chambers (250) are used for purification, the chambers (250) can include a material configured to absorb a selected portion from the fluid mixture in the chambers (250). In some such versions, the material may include a cellulose material that may selectively absorb the double-stranded mRNA from the mixture. In some such versions, the cellulose material may be inserted into only one chamber (250) of the pair of chambers (250), such that mixing of fluid from the first chamber (250) of the pair to the second chamber (250) of the pair may effectively remove the mRNA and / or any other components from the fluid mixture, which may then be transferred further downstream to another pair of chambers (270) for further processing or export. Alternatively, the chamber (250) may be used for any other suitable purpose.

[0151] An additional valve chamber (252) is interposed between each chamber (250) and a corresponding chamber (270) such that fluid may be selectively communicated from chamber (250) to chamber (270) via the valve chamber (252). The chambers (270) are also coupled to one another such that the process chip (200) may communicate fluid back and forth between the chambers (270). The chambers (270) may be used to provide mixing of fluids and / or may serve any of a variety of other purposes described herein and may have any suitable configuration.

[0152] As shown in FIG. 3, the chamber (270) is also coupled to an additional fluid port (221) via a corresponding fluid channel (223) and valve chamber (225). The fluid port (221), fluid channel (223), and valve chamber (225) may be operatively configured as the fluid port (220), fluid channel (222), and valve chamber (224) described above. In some versions, the fluid port (221) is used to communicate additional fluids to the chamber (270). Additionally or alternatively, the fluid port (221) may be used to communicate fluids from the process chip (200) to another device. For example, fluid from the chamber (270) may be directly communicated via the fluid port (221) to another process chip (200), to one or more vials in the reagent storage frame (107), or elsewhere.

[0153] The process chip (200) further includes several reservoir chambers (260). In this example, each reservoir chamber (260) is configured to receive and store a fluid in communication with or from a corresponding chamber (250, 270). Each reservoir chamber (260) has a corresponding inlet valve chamber (262) and outlet valve chamber (264). Each inlet valve chamber (262) is interposed between the reservoir chamber (260) and the corresponding chamber (250, 270) and is thereby operable to allow or prevent the flow of fluid between the reservoir chamber (260) and the corresponding chamber (250, 270). Each outlet valve chamber (264) is operable to meter the flow of fluid between the reservoir chamber (260) and a corresponding fluid port (266). In some versions, each fluid port (266) is configured to communicate fluid from a corresponding vial in the reagent storage frame (107) to a corresponding reservoir chamber (260). Additionally or alternatively, each fluid port (266) may be configured to communicate fluid from a corresponding reservoir chamber (260) to a corresponding vial in the reagent storage frame (107). In this example, the reservoir chamber (260) is used to provide a metered amount of fluid communicated to and / or from the process chip (200). Alternatively, the reservoir chamber (260) may be utilized for any other suitable purpose, including, but not limited to, pressurizing fluid communicated to and / or from the process chip (200).

[0154] 3, the process chip (200) of this example includes a plurality of pressure ports (240). Each pressure port (240) has an associated pressure channel (244) formed in the process chip (200), such that pressurized gas communicated through a pressure port (240) is further communicated through a corresponding pressure channel (244). As described in more detail below, each pressure port (240) is configured to receive pressurized gas from a corresponding pressure line (208) from the fluid interface assembly (109). In this embodiment, each pressure channel (244) leads to a corresponding chamber (224, 225, 230, 234, 250, 252, 260, 262, 264, 270), thereby providing valving or peristaltic pumping through such chambers (224, 225, 230, 234, 250, 252, 260, 262, 264, 270), as described in more detail below.

[0155] The process chip (200) may also include electrical contacts, pins, pin sockets, capacitive coils, inductive coils, or other mechanisms configured to provide electrical communication with other components of the system (100). In the example shown in FIG. 3, the process chip (200) includes an electrically active area (212) that includes such electrical communication features. The electrically active area (212) may further include electrical circuitry and other electrical components. In some versions, the electrically active area (212) may provide communication of power, data, and the like. Although the electrically active area (212) is shown in one particular location on the process chip, the electrically active area (212) may alternatively be positioned in any other suitable location or locations. In some versions, the electrically active area (212) is omitted.

[0156] As shown in Figures 4A-4F, the process chip (200) further includes a first plate (300), an elastic layer (302), a second plate (304), and a third plate (306). As described in more detail below, some versions of the elastic layer (302) are in the form of a flexible membrane. The first plate (300) has an upper surface (210) and a lower surface (310), the lower surface (310) being juxtaposed with the elastic layer (302). The second plate (304) has an upper surface (312) and a lower surface (314), the upper surface (312) being juxtaposed with the elastic layer (302), and the lower surface (314) being juxtaposed with the third plate (306). Thus, the elastic layer (302) is interposed between the first plate (300) and the second plate (304). In this embodiment, another elastic layer (316) is also interposed between the second plate (304) and the third plate (306), although this elastic layer (316) is optional.

[0157] The plates (300, 304, 306) of this embodiment are substantially translucent to visible light and / or ultraviolet light. "Substantially translucent" means that at least 90% (including in some cases 100%) of the light is transmitted through the material, as compared to a translucent material. In some variations, one or more of the plates (300, 304, 306) may include a material that is substantially transparent to visible light and / or ultraviolet light. "Substantially" translucent means that at least 90% (including in some cases 100%) of the light is transmitted through the material, as compared to a completely transparent material. As another example, one or more of the plates (300, 304, 306) may provide transmission of ultraviolet light at a wavelength of about 260 nm at a transmission rate ranging from about 0.2% to about 20%, including from about 0.4% to about 15%, or from about 0.5% to about 10%.

[0158] The plates (300, 304, 306) of this embodiment are also rigid. In some other versions, one or more of the plates (300, 304, 306) are semi-rigid. The plates (300, 304, 306) may comprise glass, plastic, silicone, and / or any other suitable material. In some versions, one or more of the plates (300, 304, 306) are formed as a stack of two or more layers of material, such that each plate (300, 304, 306) is not necessarily formed as a single homogenous continuum of material. The material that makes up one of the plates (300, 304, 306) may also be different from the material that makes up the other plates (300, 304, 306).

[0159] The elastic layer (302) in this embodiment is formed as a liquid-impermeable flexible membrane. In some versions, the elastic layer (302) is gas-permeable, despite being liquid-impermeable. In some such versions, certain areas of the elastic layer (302) are treated to be gas-permeable, while untreated areas of the elastic layer (302) are gas-impermeable. As described below, the elastic layer (302) can be used to drive fluid across the process tip (200) via peristaltic pumping action. Also, as described below, the elastic layer (302) can be used to provide valves at various locations along the process tip (200). In some versions, a single sheet of elastic material spans the width of the process tip (200) to form the elastic layer (302). In some other versions, two or more separate pieces of elastic material are used to form the elastic layer (302), with such separate pieces of elastic material positioned at different locations across the width of the process tip (200). By way of example only, the elastic layer (302) may include a membrane comprising a polydimethylsilicone (PDMS) elastomeric film.

[0160] As best seen in Figures 4A-4F, the first and second plates (300, 304) cooperate to define a plurality of chambers (320, 322, 324, 326), with the resilient layer (302) bisecting each chamber (320, 322, 324, 326) into a corresponding upper chamber region (330) and lower chamber region (332). The chambers (224, 225, 230, 234, 250, 252, 260, 262, 264, 270) shown in Figure 3 may be constructed and operable as the chambers (320, 322, 324, 326) shown in Figures 4A-4F. For example, chamber (320) may be similar to chamber (264), chamber (322) may be similar to chamber (260), chamber (324) may be similar to chamber (262), and chamber (326) may be similar to chamber (250).

[0161] As shown in Figures 4A-4F, a fluid port (220) is formed through the first plate (220). A corresponding opening (342) is formed through a region of the elastic layer (302) underlying the fluid port (220). The fluid channel (222) extends from the opening (342) to the lower chamber region (332) of the first chamber (320). As described above, the fluid port (220) is configured to receive a fluid line (206) from the fluid interface assembly (109). The distal end of the fluid line (206) is configured to seal against the region of the elastic layer (302) exposed by the fluid port (220) and communicate a fluid (207) through the opening (342). In some versions, a spring or other resilient member provides a resilient bias to the fluid line (206), biasing the distal end of the fluid line (206) against the area of ​​the resilient layer (302) exposed by the fluid port (220), thereby maintaining a seal. Fluid (207) from the fluid line (206) reaches the lower chamber area (332) of the first chamber (320) via the fluid channel (222). As described in more detail below, this fluid (207) can be further communicated from the first chamber (320) to other chambers (322, 324, 326) by peristaltic pumping action provided through the resilient layer (302). After reaching the fourth chamber (326), the fluid (207) can be further communicated to other chambers or other features in the process chip (200), communicated to storage vials in the reagent storage frame (107), or otherwise processed. Thus, the path for fluid (207) does not necessarily have to terminate in the fourth chamber (326). It should also be understood that any of the other fluid ports (221, 266) shown in Figure 3 may be configured and operable as fluid port (220) shown in Figures 4A-4F.

[0162] A pressure port (240) is formed through the first plate (220). A corresponding opening (344) is formed through the area of ​​the elastic layer (302) underlying the fluid port (240). The pressure channel (244) extends from the opening (344) to the upper chamber area (330) of the first chamber (320). As described above, the pressure port (240) is configured to receive a pressure line (208) from the fluid interface assembly (109) and thereby receive pressurized gas from the pressure source (117). The distal end of the pressure line (208) is configured to seal against the area of ​​the elastic layer (302) exposed by the pressure port (240) and communicate either positive or negative pressure gas through the opening (344). In some versions, a spring or other resilient member provides a resilient bias to pressure line (208), biasing the distal end of pressure line (208) against the area of ​​resilient layer (302) exposed by pressure port (240), thereby maintaining a seal. Positive or negative pressure gas from pressure line (208) reaches upper chamber region (330) of fourth chamber (326) via pressure channel (244).

[0163] Although Figures 4A-4F show only one pressure line (208) coupled to the process chip (200), the process chip (200) may have several coupled pressure lines (208) that independently apply positive or negative pressure to corresponding chambers (320, 322, 324, 326) of the process chip (200). In some versions, one or more of the chambers (320, 322, 324, 326) have their own dedicated pressure line (208) and corresponding pressure channel (244). Additionally or alternatively, one or more of the chambers (320, 322, 324, 326) may share a common pressure line (208), either via the same pressure channel (244) or via separate pressure channels (244). 4A-4F show pressure channels (244) formed through the second plate (304), some pressure channels (244) (or regions of pressure channels (244)) may be formed through the first plate (300). For example, some pressure channels (244) (or regions of pressure channels (244)) may be formed between a recess in the lower surface of the first plate (300) and the upper surface of the elastic layer (302).

[0164] A. Example of valving and peristaltic pumping actuated through an elastic layer As described above, the elastic layer (302) may operate to drive fluid through the process chip (200) by peristaltic pumping action and to block movement of fluid through the process chip (200) by providing valving action. An example of such operation is shown in the sequence shown throughout Figures 4A-4F. In this example, chambers (320, 324) function as valve chambers and chamber (322) functions as a metering chamber. Chamber (326) functions as a working chamber such that a synthesis, purification, dialysis, compounding, concentration, or some other process is performed within chamber (326). This configuration, arrangement, and use of chambers (320, 322, 324, 326) are provided as illustrative examples. Chambers (320, 322, 324, 326) may alternatively be configured, arranged, and used in other ways.

[0165] Figure 4A shows the process chip (200) in a state where no fluid has yet been communicated to the process chip (200) and no pressurized gas has yet been communicated to the process chip (200). In Figure 4B, positive pressure gas has been communicated to the upper chamber region (330) of the chamber (324), negative pressure gas has been communicated to the upper region (330) of the chambers (320, 322), and fluid (207) has been communicated to the chambers (320, 322). In this state, the positive pressure gas deforms the portion of the elastic layer (302) within the chamber (324) such that the elastic layer (302) seats against a surface of the lower chamber region (332) of the chamber (324). This seating of the elastic layer (302) against the surface of the lower chamber region (332) of the chamber (324) prevents the fluid (207) from entering the chamber (324), so that the chamber (324) acts like a closed valve in the state shown in Figure 4B. The negative pressure gas in the upper chamber region (330) of the chambers (320, 322) causes the corresponding portions of the elastic layer (302) in the chambers (320, 322) to deform and seat against the upper chamber region (330) of the chambers (320, 322), thereby allowing the fluid (207) to occupy the entire volume of the chambers (320, 322).

[0166] After reaching the condition shown in FIG. 4B, positive pressure gas may be communicated to the upper chamber region (330) of chamber (320) while the air pressure conditions in chambers (322, 324) remain unchanged. This results in the condition shown in FIG. 4C. As shown, the positive pressure gas deforms the portion of elastic layer (302) in chamber (320) such that elastic layer (302) seats against a surface of the lower chamber region (332) of chamber (320). This seating of elastic layer (302) against a surface of the lower chamber region (332) of chamber (320) drives fluid (207) out of chamber (320), causing chamber (320) to act like a closed valve in the condition shown in FIG. 4C. However, the volume of fluid (207) in chamber (322) is unaffected in the condition shown in FIG. 4C. Thus, the chamber (322) can be used to provide metering of the fluid (207) such that only a precise, predetermined volume of the fluid (207) is communicated further along the process chip (200). By way of example only, such metered volumes can be on the order of 10 nL, 20 nL, 25 nL, 50 nL, 75 nL, 100 nL, 1 microliter, 5 microliters, etc.

[0167] Once the proper metered volume is achieved, the air pressure conditions in chambers (320, 322) may remain unchanged while negative pressure gas is communicated to the upper chamber regions (330) of chambers (324, 326). This results in the condition shown in FIG. 4D. As shown, the negative pressure gas in the upper chamber regions (330) of chambers (324, 326) causes corresponding portions of elastic layer (302) in chambers (324, 326) to deform and seat against the surfaces of the upper chamber regions (330) of chambers (324, 326). This effectively opens the valve formed by chamber (324) and renders chamber (326) ready to receive fluid (207). This also creates a negative pressure in chamber (324) that draws fluid (207) from chamber (322) into chamber (324).

[0168] When the valve formed by chamber (324) is in an open state, the positive pressure gas is communicated to the upper chamber region (330) of chamber (322) while the air pressure conditions in chambers (320, 324, 326) may remain unchanged. This results in the state shown in FIG. 4E. As shown, the positive pressure gas in the upper chamber region (330) of chamber (322) causes the corresponding portion of elastic layer (302) in chamber (322) to deform and seat against a surface of the lower chamber region (332) of chamber (322). This deformation of elastic layer (302) drives fluid (207) out of chamber (322). Because the valve formed by chamber (320) is in a closed state and the valve formed by chamber (324) is in an open state, fluid (207) advances from chamber (322) into chamber (324). In this embodiment, the volume of chamber (322) is greater than the volume of chamber (324), such that fluid (207) from chamber (322) overflows from chamber (324) into chamber (326).

[0169] When fluid (207) is communicated from chamber (322) to chambers (324, 326), the air pressure conditions in chambers (320, 322, 326) may remain unchanged while positive pressure gas is communicated to upper chamber region (330) of chamber (324). This results in the condition shown in FIG. 4F. As shown, the positive pressure gas in upper chamber region (330) of chamber (324) causes a corresponding portion of elastic layer (302) in chamber (324) to deform and seat against a surface of lower chamber region (332) of chamber (324). This deformation of elastic layer (302) drives fluid (207) out of chamber (324). Fluid (207) passes from chamber (324) into chamber (326) because the deformed portion of elastic layer (302) within chamber (324) effectively seals chamber (324) from chamber (324) (e.g., such that chamber (324) is acting like a closed valve).

[0170] At the stage shown in Figure 4F, fluid (207) has been evacuated from chambers (320, 332, 324) and chamber (326) contains a precisely metered amount of fluid (207) in chamber (322). Fluid (207) in chamber (326) may be further processed in chamber (326) in accordance with the teachings herein. Additionally or alternatively, fluid (207) in chamber (326) may be connected to one or more other chambers in process chip (200), connected to a vial in reagent storage frame (107), or otherwise handled. Regardless of what is done with fluid (207) after it reaches chamber (326), it should be understood that fluid (207) has been communicated sequentially along chambers (320, 322, 324) via peristaltic action generated through elastic layer (302) in response to positive or negative pressure gas being communicated to the upper chamber regions (330) of chambers (320, 322, 324, 326) in a particular order until it reaches chamber (326). Such peristaltic pumping may be particularly advantageous for moving fluids that may be viscous or that may contain suspended particles, such as purification or capture beads. Such peristaltic pumping by selective deformation of elastic layer (302) may also be referred to as air barrier deflection or "pneumatic deflection."

[0171] In some scenarios, it may be desirable to remove air or other gas from one or more fluid paths within the process chip (200). To accomplish this, the process chip (200) may include one or more chambers configured to provide ventilation of the fluid paths or otherwise vent gas from the fluid paths. For example, such ventilation or venting may be performed as part of a priming process when a fluid is initially introduced into the process chip (200). Additionally or alternatively, such ventilation or venting may be performed to release gas generated in the fluid during the process of forming a therapeutic composition. Such ventilation or gas release chambers may be referred to as "vacuum caps." In some versions, at least the region of the elastic layer (302) that is positioned within the vacuum cap (if not the entire elastic layer (302)) is gas permeable (while still being liquid impermeable). Negative pressure gas may be applied to the upper chamber region (330) of the chamber being used as a vacuum cap, which may draw air or gas from the fluid paths through the corresponding region of the elastic layer (302). In some versions, the upper chamber region (330) of the chamber being used as a vacuum cap includes one or more protrusions or standoff features that prevent the corresponding region of the resilient layer (302) from fully seating against the surface of the upper chamber region (330) of the chamber being used as a vacuum cap, which may further facilitate evacuation of air or other gases through the vacuum cap.

[0172] B. Mixing Stage Example Although the chambers (270) may be used to perform mixing of fluids (e.g., by repeatedly communicating fluids back and forth between the chambers (270)), it may be desirable to provide differently configured mixing stages along the fluid paths toward the chambers. FIG. 5 shows an example of such a mixing stage (400) that may be incorporated into the process chip (111, 200). The mixing stage (400) may also be referred to as a "mixer," and thus the terms "mixer" and "mixing stage" should be read interchangeably. The mixing stage (400) of this example includes two fluid inlet channels (402, 404) that are offset from one another and are configured to transport one or more substances (e.g., biomolecular products, buffers, carriers, minor components) that may be combined together. Although two inlet channels (402, 404) are shown, three or more (four, five, six, etc.) may be used and may converge into the same mixing stage (400). The fluid mixture may pass through the inlet channels (402, 404) under positive pressure. This pressure can be constant, variable, increasing, decreasing, and / or pulsating. The inlet channels (402, 404) can receive fluid from any of the various types of chambers or fluid ports described herein.

[0173] The inlet channels (402, 404) converge at a junction (406) that leads to a converging channel (408). In this embodiment, the converging channel (408) has a cross-sectional area that is smaller than the cross-sectional area of ​​each of the inlet channels (402, 404). The reduced cross-sectional area may include a channel height that is smaller than the channel height of the inlet channels (402, 404) and / or a channel width that is smaller than the channel width of the inlet channels (402, 404). This reduced cross-sectional area may promote mixing of the fluids introduced via the inlet channels (402, 404).

[0174] The first vortex mixing chamber (414) is positioned downstream of the confluence channel (408), and the fluids enter the first vortex mixing chamber (414) through an inlet opening (410). The inlet opening (410) is positioned near a corner of the first vortex mixing chamber (414). The outlet opening (412) is positioned near another corner of the first vortex mixing chamber (414). The first vortex mixing chamber (414) has a height and width that are greater than the height and width of the confluence channel (408). These greater dimensions, along with the relative positioning of the inlet opening (410) and the outlet opening (412), may promote the formation of vortices within the first vortex mixing chamber (414). Such vortices may further promote mixing of the fluids as they flow through the first vortex mixing chamber (414).

[0175] A connecting channel (416) connects the first vortex mixing chamber (414) with a second vortex mixing channel (420). The connecting channel (416) has a height and width smaller than the height and width of the first vortex mixing chamber (414). The second vortex mixing channel (420) has a height and width larger than the height and width of the connecting channel (416). Fluid flows from the connecting channel (416) into the second vortex mixing chamber (420) through an inlet opening (418) positioned near a corner of the second vortex mixing chamber (420). Fluid exits the second vortex mixing chamber (420) through an outlet opening (422) positioned at another corner of the second vortex mixing chamber (420). The outlet opening (420) leads to an outlet channel (424). The outlet channel (424) has a height and width smaller than the height and width of the second vortex mixing chamber (420). The larger dimensions of the second vortex mixing chamber (420) relative to the dimensions of the channels (416, 424) and the relative positioning of the inlet opening (418) and outlet opening (422) may promote the formation of vortices within the second vortex mixing chamber (420). Such vortices may further promote mixing of the fluids as they flow through the second vortex mixing chamber (420).

[0176] By the time the fluids exit through the outlet channel (424), they may be sufficiently mixed by the mixing stage (400). Such mixed fluids may be further communicated to other chambers or ports for further processing. The mixing stage (400) in this example has two vortex mixing chambers (414, 420), although other versions may have only one vortex mixing chamber or more than two vortex mixing chambers.

[0177] FIG. 6 shows an example of a region of a process chip (500) incorporating two mixing stages. In this example, a first fluid passes through a first inlet valve (510), then through a first flow restrictor (520) in the form of a serpentine channel, then through a first vacuum cap (530) before reaching a first inlet (540) of the first mixing stage. A second fluid passes through a second fluid inlet valve (512), then through a second flow restrictor (522) in the form of a serpentine channel, then through a second vacuum cap (532) before reaching a second inlet (542) of the first mixing stage. The inlets (540, 542) converge to provide a single flow path through a confluence channel (544), which leads to a first set (550) of vortex mixing chambers. The vortex mixing chambers of the first set (550) may be configured and operable as the vortex mixing chambers (414, 420) described above. In this example, four vortex mixing chambers are included in the first set (550), although the first set (550) may instead have any other suitable number of vortex mixing chambers.

[0178] After flowing through the first set of vortex mixing chambers (550), the fluid reaches the first inlet (560) of the second mixing stage. The third fluid passes through the third fluid inlet valve (514), then through a third flow restrictor (524) in the form of a serpentine channel, then through a third vacuum cap (534) before reaching the second inlet (562) of the second mixing stage. The inlets (560, 562) converge to provide a single flow path through a confluence channel (564), which leads to the second set (552) of vortex mixing chambers. The vortex mixing chambers of the second set (552) may be configured and operable as the vortex mixing chambers (414, 420) described above. In this example, two vortex mixing chambers are included in the second set (552), but the second set (552) may instead have any other suitable number of vortex mixing chambers.

[0179] After flowing through the second set of vortex mixing chambers (552), the fluid passes through a fourth vacuum cap (536). After passing through the fourth vacuum cap (536), the fluid may be substantially mixed by both sets of vortex mixing chambers (550, 552) and any air bubbles may have been removed by the vacuum caps (530, 532, 534, 536). After passing through the fourth vacuum cap (536), the mixed fluid may be further communicated to other chambers or ports for further processing.

[0180] In one example of how the process chip (500) may be used, polynucleotides (e.g., mRNA in water) may be introduced through a first inlet valve (510), while delivery vehicle molecules in a fluid medium (e.g., ethanol or some other fluid medium) may be introduced through a second inlet valve (512). These fluids may be mixed through a first set of vortex mixing chambers (550) to form composite nanoparticles. A diluent (e.g., a citrate-based buffer solution or other type of buffer) may be introduced through a third inlet valve (514) to provide pH control as the diluent is mixed with the composite nanoparticles in the second set of vortex mixing chambers (552). Other suitable methods in which the process chip (500) may be used will be apparent to those of skill in the art in view of the teachings herein.

[0181] The aforementioned structures are examples of how mixing of fluids from different sources can be performed in the process chip (111, 200, 500). It is contemplated that various other types of structures can be used to provide mixing of fluids from different sources within the process chip (111, 200, 500).

[0182] C. Pressure Sensing Stage Example In some scenarios, it may be desirable to provide one or more sensors operable to sense the pressure of a fluid within the process chip (111, 200, 500). Figures 7A-7B show an example of a pressure sensing stage (700) that includes a portion of a process chip (710), a camera (702), and a controller (121). In addition to including the features and functions described below, the process chip (710) may include any of the other features and functions described above in the context of the process chip (111, 200, 500). In other words, the following teachings regarding the pressure sensing stage (700) may be readily applied to any of the various process chips (111, 200, 500) described herein.

[0183] The camera (702) in this example is positioned to provide a field of view (704) within which the camera (702) can capture an image of the optical features (760) of the process chip (700). The controller (121) receives image signals from the camera (702) and processes these image signals to determine fluid pressure values, as described in more detail below. The controller (121) may further execute various algorithms using at least such determined fluid pressure values, which are also described in more detail below. In this example, the controller (121) of the pressure sensing stage (700) is the same as the controller (121) used to perform other operations in the system (100), as described above. In some other versions, a separate controller is used to determine fluid pressure values ​​using at least the image signals from the camera (702). In such versions, the separate controller may communicate the determined fluid pressure values ​​to the controller (121) for executing the pressure-based algorithms. Alternatively, the determined fluid pressure values ​​may be utilized in any other suitable manner by any other suitable hardware components.

[0184] The process chip (710) of this example includes a first plate (720), an elastic layer (730), a second plate (740), and a third plate (750). The elastic layer (730) is interposed between the plates (720, 740). The third plate (750) cooperates with the second plate (740) to define a channel (742) through which a fluid may flow. The area of ​​the channel (742) on the left side of FIGS. 7A-7B may be considered a fluid inlet port for the pressure sensing stage (700), while the area of ​​the channel (742) on the right side of FIGS. 7A-7B may be considered a fluid output port for the pressure sensing stage (700). The plates (720, 740, 750) of the process chip (710) may be configured and operable like the plates (300, 304, 306) of the process chip (200). Similarly, the elastic layer (730) of the process chip (710) may be configured and operable like the elastic layer (302) of the process chip (200). Thus, the elastic layer (730) may extend across all or a significant portion of the width of the process chip (710) such that the elastic layer (730) may also perform functions (e.g., valving, peristaltic pumping, ventilation, etc.) within other chambers of the process chip (710).

[0185] The second plate (740) defines an opening (744) fluidly coupled to the channel (742), such that the opening (744) exposes a portion (732) of the elastic layer (730) to the fluid in the channel (742). The first plate (720) defines an opening (722) that aligns with the opening (744) of the second plate (740). In this example, with the opening (744) providing a path for the fluid in the channel (742) to reach the portion (732) of the elastic layer (730) and the opening (722) providing a clearance for the elastic layer (730) to deform, the portion (732) of the elastic layer (730) may achieve a deformed state as shown in FIG. 7B in response to a positive pressure of fluid in the channel (742).

[0186] Optical feature (760) is positioned on top of portion (732) of resilient layer (730). Optical feature (760) is configured to deform with resilient layer (730). For example, as shown in the transition from Figure 7A (unpressurized state) to Figure 7B (pressurized state), resilient layer (730) and optical feature (760) deform together upward along a central axis (CA) in response to positive fluid pressure in channel (742).

[0187] In this example, the central axis (CA) is perpendicular to a plane defined by the elastic layer (730) when the elastic layer (730) is in an undeformed state (FIG. 7A) and is positioned at the radial center of the opening (722). The pressurized state shown in FIG. 7B may occur during peristaltic driving of fluid from one location upstream of the channel (742) to another location downstream of the channel (742) during any of the various operations described herein. Additionally or alternatively, the pressurized state shown in FIG. 7B may occur in a variety of other scenarios, including, but not limited to, the fluid in the channel (742) being from an already pressurized fluid source in the reagent storage frame (107), changes in ambient pressure, pressure loss through piping, and / or various other conditions. With the optical feature (760) directly or indirectly within the field of view (704) of the camera (702), the camera (702) is operable to capture an image of the deformation of the optical feature (760) and transmit the image data to the controller (121). The controller (121) is operable to convert the image data into pressure values ​​indicative of the pressure of the fluid in the channels (742), as described in more detail below.

[0188] Because the elastic layer (730) and the optical features (760) deform together along the central axis (CA) in response to the positive pressure of the fluid in the channel (742) ( FIG. 7B ), the elastic layer (730) and the optical features (760) may also deform along a lateral dimension (LD) transverse to the central axis (CA). As described in more detail below, the camera (702) and the controller (121) may be operated to specifically track this “lateral deformation” along the lateral dimension (LD) to determine the pressure of the fluid in the channel (742). Such lateral deformation of the elastic layer (730) and the optical features (760) may be tracked in addition to, or instead of, tracking the deformation of the elastic layer (730) and the optical features (760) along the central axis (CA).

[0189] While Figure 7B shows the elastic layer (730) and optical features (760) deforming upward along the central axis (CA) in response to positive fluid pressure in the channel (742), there may also be scenarios in which the elastic layer (730) and optical features (760) deform downward along the central axis (CA) in response to negative fluid pressure in the channel (742). In such scenarios, the elastic layer (730) and optical features (760) may also achieve lateral deformation as described above. Thus, the camera (702) and controller (121) may be operated to track this lateral deformation to determine the pressure of the fluid in the channel (742), regardless of whether the pressure is positive (resulting in an upward deformation along the central axis (CA)) or negative (resulting in a downward deformation along the central axis (CA)).

[0190] As shown in FIG. 8, the optical feature (760) spans the entire radial distance (D1) of the opening (722). Alternatively, the optical feature (760) may span only a portion of the entire radial distance (D1) of the opening (722). In some versions, it may be desirable to track the lateral deformation of the elastic layer (730) through a particular annular region (762) of the optical feature (760). In other words, it may be desirable to track the deformation of a particular annular region of the elastic layer (730) by optically tracking the optical feature (760) within the annular region (762) of the optical feature (760). In this example, the annular region (762) is offset radially outward from the central axis (CA) and radially inward from the outer periphery of the opening (722). The annular region (762) is defined between a first partial radial distance (D2) and a second partial radial distance (D3). Thus, the annular region (762) has a radial dimension (D4) between these partial radial distances (D2, D3).

[0191] By way of example only, the openings (722) may have a total radial distance (D1) ranging from about 0.75 mm to about 3.5 mm. By way of further example only, the first partial radial distance (D2) may range from about 0.2 mm to about 2.0 mm. By way of further example only, the second partial radial distance (D3) may range from about 1.0 mm to about 3.0 mm. By way of further example only, the radial dimension (D4) of the annular region (762) may range from about 0.5 mm to about 2.25 mm. As another example, the optical features (760) may take the form of concentric rings spaced apart from one another by a distance ranging from about 50 micrometers to about 150 micrometers.

[0192] In this example, the optical features (760) do not affect the elasticity of the elastic layer (730). In some versions, the optical features (760) are adhered to the elastic layer (730) via an adhesive. In some other versions, the optical features (760) are in the form of a film that is applied to the elastic layer (730). In some other versions, the optical features (760) are printed directly onto the elastic layer (730). In some other versions, the optical features (760) are engraved onto the elastic layer (730). In some other versions, the optical features (760) are formed as a texture on the elastic layer (730). Alternatively, the optical features (760) may be affixed to or otherwise incorporated into the elastic layer (730) in any other suitable manner. In some versions, the optical feature (760) spans the entire area of ​​the portion (732) of the elastic layer (730) as defined by the entire radial distance (D1) of the opening (722). In some other versions, the optical feature (760) is positioned only on one or more distinct areas of the portion (732) of the elastic layer (730) within the opening (722) without spanning the entire area of ​​the portion (732) of the elastic layer (730) within the opening (722). For example, in some versions, the optical feature (760) is positioned only within the annular region (762) shown in FIG. 8, such that the optical feature (760) does not extend through the first partial radial distance (D2) or through the space between the second partial radial distance (D3) and the full radial distance (D1).

[0193] In this embodiment, the pressure sensitive portion (732) of the elastic layer (730) and the optical feature (760) are exposed to the atmosphere such that deformation of the elastic layer (730) and the optical feature (760) uses the difference between at least the pressure of the fluid in the channel (742) and the atmospheric pressure. In some other versions, the area of ​​the process chip (700) above the pressure sensitive portion (732) of the elastic layer (730) and the optical feature (760) may be surrounded and exposed to a fluid path that is pressurized by the system (100) at a known pressure level. In such a scenario, the controller (121) may measure the pressure of the fluid in the channel (742) relative to this known system generated pressure level. Such versions may prevent changes in atmospheric pressure from affecting the pressure sensing process in the way that they may otherwise occur in versions in which the pressure sensitive portion (732) of the elastic layer (730) and the optical feature (760) are exposed to the atmosphere.

[0194] III. Examples of Particle Size Sensing via Dynamic Light Scattering As described above, one or more process chips (111, 200, 500) may be utilized to prepare polynucleotide therapeutics (e.g., mRNA therapeutics, etc.). For example, polynucleotides such as mRNA in water may be mixed with a delivery vehicle molecule or multiple delivery vehicle molecules in ethanol to form complex nanoparticles. In some scenarios in which process chips (111, 200, 500) are utilized to prepare mRNA therapeutic compositions, it may be desirable to encapsulate the mRNA within particles on the order of 100 nm in diameter. The encapsulation process may include coordinated mixing of the mRNA and delivery vehicle molecules via a mixing stage, such as the mixing stage (400) described above. Such delivery vehicle molecules may include lipidoid-based molecules (e.g., aminolipidated peptoids). During this process, the temperature of the mixing stage (400) may be controlled to a temperature or temperature range (e.g., about 2°C to about 20°C) calibrated to enhance mixing for mixing in the mixing stage (400). The elevated mixing temperature can be based on the formulations (in some instances, the sequence of the mRNA and / or delivery vehicle) being mixed within the particular geometry of the mixing chamber.

[0195] As used herein, a "delivery vehicle" refers to any substance that at least partially facilitates in vivo, in vitro, or ex vivo delivery of a polynucleotide to a target cell or tissue (such as a tumor). Referring to something as a delivery vehicle does not necessarily exclude the possibility that the delivery vehicle may also have a therapeutic effect. Some versions of the delivery vehicle may provide additional therapeutic effects. In some versions, the delivery vehicle may be an amino-lipidated peptoid delivery vehicle that may at least partially encapsulate the mRNA.

[0196] Variations in the geometry, flow rate, chemical composition, and mixing ratio of the mixing chambers (414, 420, 550, 552) can all affect particle size and / or size distribution, which in turn can affect therapeutic efficacy. These variations may occur due to process control limitations, but they may also change over time due to the dynamic nature of the process. For example, material may deposit and accumulate on the walls of the mixing chambers (414, 420, 550, 552) over time, thereby changing the properties of the mixing chambers (414, 420, 550, 552) and thereby changing the output from the mixing chambers (414, 420, 550, 552). While some such variations may be tolerable to a certain extent, it may be beneficial to provide a quality control feature to monitor whether the output of the mixing chambers (414, 420, 550, 552) deviates beyond acceptable limits. It may further be desirable for such quality control features to provide such monitoring on the process chip (111, 200, 500) without requiring fluids to be communicated from the process chip (111, 200, 500) to an external quality control stage.

[0197] In the context of the encapsulated mRNA particle example provided above, mixing chamber (414, 420, 550, 552) output parameters that may be varied include encapsulated mRNA particle size and / or size distribution. If the particle size and / or size distribution of the encapsulated mRNA from the mixing chamber (414, 420, 550, 552) deviates beyond an acceptable range, such deviation may indicate excessive accumulation of material on the walls of the mixing chamber (414, 420, 550, 552) and / or other undesirable conditions. Furthermore, unacceptable particle size and / or size distribution of the encapsulated mRNA may render such encapsulated mRNA particles unusable in therapy, and therefore, it may be desirable to immediately stop output from any mixing chamber (414, 420, 550, 552) that is outputting encapsulated mRNA particles whose particle size and / or size distribution deviates beyond an acceptable range.

[0198] One method that can be used to measure the size and / or size distribution of particles (such as encapsulated mRNA particles) is dynamic light scattering (DLS). DLS involves projecting light into a liquid containing particles, which scatter the light. An optical sensor is used to sense the pattern of light scattered by the particles. This scattering pattern changes over time as the particles disperse in the liquid through Brownian motion. Due to Brownian motion, the particles may initially be highly correlated, and then eventually transition to an uncorrelated state. Autocorrelation can be used to track the changes in the scattering pattern over time. When the autocorrelation function is plotted over time, the resulting curve can be analyzed to determine particle diffusion, which can be used to determine particle size and / or size distribution. In some scenarios, the shape of the autocorrelation function curve can indicate whether the encapsulation process performed through one or more mixing chambers (414, 420, 550, 552) was successful (i.e., within acceptable limits).

[0199] The following examples show how DLS can be incorporated into a process chip (111, 200, 500). Although these examples are provided in the context of encapsulated mRNA particles, the same teachings can be readily applied to other contexts in which any other type of particle is being generated through the process chip (111, 200, 500). Similarly, although these examples are provided in the context of output from a mixing chamber, the same teachings can be readily applied to output from other types of stages within a process chip (111, 200, 500). Thus, the following teachings are not necessarily limited to encapsulated mRNA particles or output from a mixing chamber.

[0200] A. Example of a process chip configuration for dynamic light scattering 9-11 show an example of a process chip (800) and a body (900). The process chip (800) of this example may be used to generate encapsulated mRNA particles, while the body (900) may be coupled with other optical components as described below to provide a dynamic light scattering stage. The process chip (800) of this example has a generally square shape, and the body (900) is positioned near a corner of the square shape. Such positioning may minimize intrusion of the body (900) onto the top surface (806) of the process chip (800), thereby leaving room for other components to be positioned on the top surface (806) of the process chip (800) and preventing the body (900) from substantially obscuring areas of the process chip (800) that may need to be visually observed, such as by a sensor (105, 160) or a camera (702). Except as otherwise described below, the process chip (800) may be constructed and operative as the process chips (111, 200, 500) described above.

[0201] As best seen in FIG. 10, the process chip (800) of this example includes a plurality of fluid channels (802). Each fluid channel (802) has a fluid port (804) such that fluid can be communicated to the fluid channel (802) through a corresponding fluid port (804). Some of the fluid ports (804) may receive fluid from corresponding vials in the reagent storage frame (107). Additionally or alternatively, some of the fluid ports (804) may receive fluid from corresponding fluid outputs of another process chip (111, 200, 500). Alternatively, the fluid ports (804) may receive fluid from any other suitable source.

[0202] The fluid channels (802) lead to several mixing assemblies (820) that are integrated into the process chip (800). In some versions, all of the mixing assemblies (820) on the process chip (800) have the same type of fluid input and are all intended to produce the same type of fluid output. As best seen in FIG. 12, each mixing assembly (820) includes a set of vacuum caps (822), a set of inlet valves (824), and a set of mixing chambers (830, 840). Referring to one mixing assembly (820) as representative of the other mixing assemblies (820), the mixing assembly (820) includes a first vacuum cap (822a) that receives fluid from a first fluid channel (802a), a second vacuum cap (822b) that receives fluid from a second fluid channel (802b), and a third vacuum cap (822c) that receives fluid from a third fluid channel (802c). A first valve (824a) meters the flow of fluid from the first vacuum cap (822a) to a first channel (826a) that leads to the first mixing chamber (830). A second valve (824b) meters the flow of fluid from the second vacuum cap (822b) to an inlet channel (826b) that leads to the first mixing chamber (830). The channels (826a, 826b) merge to form an inlet channel (832) that leads to a first mixing chamber (830). Thus, the fluids from the channels (826a, 826b) are mixed together in the first mixing chamber (830).

[0203] A third valve (824c) meters the flow of fluid from the third vacuum cap (822c) to a third channel (826c) leading to a second mixing chamber (840). The outlet channel (834) from the first mixing chamber (830) merges with the third channel (826c) to form an inlet channel (842) leading to the second mixing chamber (840). Thus, the fluids from the channels (834, 826c) are mixed together in the second mixing chamber (840). The mixed fluids in the second mixing chamber (840) are output through the outlet channel (844).

[0204] In some versions where a mixing assembly is used to provide encapsulated mRNA, a combination of mRNA and water may be communicated through a first fluid channel (802a) and delivery vehicle molecules in ethanol may be communicated through a second fluid channel (802b). Thus, in such versions, the mRNA and delivery vehicle molecules may be combined for encapsulation in a first mixing chamber (830). A diluent (such as a citrate-based buffer solution) may be communicated through a third fluid channel (802c). Thus, in such versions, a second mixing chamber (840) may be used to provide pH adjustment. In some variations, the mRNA and water are combined in another mixing chamber (not shown) upstream of the first fluid channel (802a). Similarly, the delivery vehicle molecules and ethanol may be combined in another mixing chamber (not shown) upstream of the second fluid channel (802b).

[0205] The additional channel (852) is fluidly coupled to the outlet channel (844) through the opening (850). The channel (852) may be fluidly coupled to a collection vial in the reagent storage frame (107) (e.g., for storage, etc.), to another process chip (111, 200, 500, 800) (e.g., for further processing, etc.), or otherwise. Another valve (854) is positioned downstream of the outlet channel (844) and the opening (850) and upstream of the manifold inlet channel (856). When the valve (854) is in a closed state, fluid from the outlet channel (844) may flow only through the opening (850) and the channel (852). When the valve (854) is in an open state, at least a portion of the fluid from the outlet channel (844) may flow through the manifold inlet channel (856). In some variations, another valve (not shown) is placed in the channel (852). In such a version, to ensure that fluid from outlet channel (844) flows only through manifold inlet channel (856) and not through channel (852), this other valve can be transitioned to a closed state when valve (854) is in an open state. This other valve in channel (852) can be transitioned to an open state when valve (854) is in a closed state.

[0206] All manifold inlet channels (856) of all mixing stages (820) are fluidly coupled to a shared manifold channel (858), which ultimately leads to a manifold outlet channel (860). Thus, the channels (856, 858, 860) cooperate to form a manifold. In this embodiment, the valves (854) can be operated such that fluid from only one manifold inlet channel (856) is communicated to the channels (858, 860) at any given time. In other words, during some operating modes of the process chip (800), only one valve (854) is in an open state at any given moment, and the other valve (854) is in a closed state. This can ensure that the output of only one mixing assembly (820) is subjected to DLS testing (as described in more detail below) at any given time. In some scenarios, all valves (854) can be in a closed state for a certain period of time.

[0207] Referring back to FIG. 10, the process chip (800) of this example includes three pressure sensing regions (810). The first pressure sensing region (810a) is fluidically coupled to the first fluid channel (804a) such that the first pressure sensing region (810a) can detect the pressure of the fluid in the first fluid channel (804a). The second pressure sensing region (810b) is fluidically coupled to the second fluid channel (804b) such that the second pressure sensing region (810b) can detect the pressure of the fluid in the second fluid channel (804b). The third pressure sensing region (810c) is fluidically coupled to the third fluid channel (804c) such that the third pressure sensing region (810c) can detect the pressure of the fluid in the third fluid channel (804c). The pressure sensing areas (810) may be part of a pressure sensing stage that is configured and operable as the pressure sensing stage (700) described above. Although Figure 10 shows one set of pressure sensing areas (810) associated with only one mixing assembly (820), other versions may be configured with the same arrangement of pressure sensing areas (810) for each and every mixing assembly (820).

[0208] As described in more detail below, the pressure sensing stage in the pressure sensing region (810) can provide pressure data associated with the fluid inlets into the mixing assembly (820), which can be used to determine fluid flow rates through the mixing assembly (820). Such flow rates can be correlated with particle size and / or size distribution data from the DLS stage to determine whether the mixing assembly (820) is operating within acceptable parameters. In other words, when the DLS data indicates that the particle size and / or size distribution of the encapsulated mRNA deviates beyond acceptable limits, the data from the pressure sensing stage in the pressure sensing region (810) can provide a further indication of where in the process chip (800) a corresponding fault is occurring.

[0209] 13-15 show components of a DLS stage integrated into a process chip (800). As shown, a manifold outlet channel (860) from a mixing assembly (820) leads to a DLS chamber (870). In this embodiment, fluid from the manifold outlet channel (860) passes through a pre-DLS stage (890) before reaching the inlet channel (872) of the DLS chamber (870). In some versions, the pre-DLS stage (890) includes a dilution stage, which dilutes the fluid before it reaches the DLS chamber (870). Such a dilution stage may be configured and operable in any suitable manner. Additionally or alternatively, the pre-DLS stage (890) may take any other suitable form and provide any other suitable function (e.g., ventilation, etc.). In some versions, the pre-DLS stage (890) is omitted.

[0210] As best seen in Figures 14-15, the DLS chamber (870) of this example includes a circular top wall (876), a circular bottom wall (878), and a cylindrical side wall (880) extending between the walls (876, 878). The walls (876, 878) and the side wall (880) cooperate to define a hollow interior. An inlet channel (872) provides fluid inlet to the hollow interior of the DLS chamber through the side wall (880) proximate the circular bottom wall (878). An outlet channel (874) provides fluid outlet from the hollow interior of the DLS chamber through the side wall (880) proximate the circular top wall (876). When viewed from an end of the DLS chamber (870), the channels (872, 874) are oriented generally tangentially to the side wall (880) and are angularly spaced from one another by approximately 180°. The cylindrical configuration of the DLS chamber (870), along with the vertical positioning and tangential orientation of the channels (872, 874), can provide a sweeping flow of fluid through the interior of the DLS chamber (870), which can aid in the removal of air bubbles from the DLS chamber (870) that could otherwise adversely affect the DLS process. In some scenarios, this flow is substantially stopped within the DLS chamber (870) during the DLS process.

[0211] Although the DLS chamber (870) has a cylindrical configuration (e.g., having a circular cross-sectional shape) in this embodiment, the DLS chamber (870) may alternatively have any other suitable configuration. For example, instead of a circular cross-sectional shape as shown, the DLS chamber (870) may have an elliptical cross-sectional shape (viewed from above down), a vesica piscis cross-sectional shape (viewed from above down), or any other suitable cross-sectional shape. Similarly, while the channels (872, 874) are shown as having a generally rectangular cross-sectional shape, the channels (872, 874) may have any other suitable cross-sectional shape. By way of example only, some versions of the channels (872, 874) may taper along the vertical dimension and / or along the horizontal dimension. In some such versions, the wider end of the taper may be at the DLS chamber (870) and the narrower end of the taper may be further away from the DLS chamber (870). Such taper may be linear and / or curved.

[0212] As described in more detail below, the DLS process involves projecting light into the DLS chamber (870) such that the light is scattered from particles in the fluid within the DLS chamber (870). The scattered light is detected and processed to establish an autocorrelation curve. In this example, the projected and scattered light passes through a region of the process chip (800) above the DLS chamber (870). Thus, at least this region of the process chip (800) includes a light-transmitting material (e.g., glass, plastic, silicone, and / or any other suitable material). Such a material may allow the projected and scattered light to pass through the region between the top surface (806) of the process chip (800) and the DLS chamber (870) without causing additional scattering of the light (which may otherwise adversely affect the accuracy of the DLS readings).

[0213] Additionally, areas of the process chip (800) at or below the circular bottom wall (878) and / or other areas of the process chip (800) may include a light absorbing material. For example, such a material may be applied to an area of ​​the bottom surface (808) of the process chip (800) or anywhere between the bottom surface (808) and the circular bottom wall (878) of the DLS chamber (870). Such a light absorbing material may prevent or minimize the ingress of ambient light into the DLS chamber (870) that might otherwise occur. In some versions, the circular bottom wall (878) and side walls (880) are coated with an opaque material that does not scatter light. As another variation, the material at or below the circular bottom wall (878) and / or other areas of the process chip (800) may be oriented or otherwise configured to directionally reflect light away from the sensing optical fiber (1020) ( FIG. 16 ) in the body (900). For example, a wedge-shaped piece of smoked glass or the like may be positioned on or beneath the circular bottom wall (878) and / or other areas of the process tip (800).

[0214] The process chip (800) of this embodiment further includes a DLS post-stage (892) fluidly coupled to the outlet channel (874) of the DLS chamber (870). In some versions, the DLS post-stage (892) is used in combination with the DLS pre-stage (890) to purge air bubbles from the fluid being tested in the DLS chamber (870). For example, the fluid may be pumped back and forth between the stages (890, 892) before being allowed to settle in the DLS chamber (870) for the DLS process. Additionally or alternatively, the DLS post-stage (892) may take any other suitable form and provide any other suitable function (e.g., ventilation, etc.). In some versions, the DLS post-stage (892) is omitted. An outlet channel (896) is fluidly coupled to the DLS post-stage (892) and leads to an output port (898). Thus, fluid passing through the DLS chamber (870) may ultimately be communicated out of the process chip (800) via the outlet channel (896) and output port (898). In versions in which the DLS post-stage (892) is omitted, the outlet channel (874) of the DLS chamber (870) may be directly fluidly coupled to the output port (898).

[0215] In some versions, the fluid from the output port (898) is communicated to a waste storage compartment. Such a waste storage compartment may be located in another process chip (111, 200, 500), in the reagent storage frame (107), or elsewhere. In some other versions, the fluid from the output port (898) is further processed to form a therapeutic composition. Such further processing may include communicating the fluid to another process chip (111, 200, 500, 800), a vial in the reagent storage frame (107), or elsewhere. Alternatively, the fluid from the output port (898) may be used in some other quality control test (e.g., in another process chip (111, 200, 500, 800) or elsewhere). Alternatively, the fluid from the output port (898) may be handled in any other suitable manner.

[0216] B. Examples of Optical Components for Dynamic Light Scattering 16-20 show the body (900) in more detail. The body (900) in this example includes an elongated vertical portion (910), a lateral portion (920), and a mounting flange (930). The vertical portion (910) defines an upper channel (912), a lens seating area (915) positioned below the upper channel (912), and a closed focusing volume (916) positioned below the lens seating area (915). As shown in FIGS. 16-17, the upper channel (912) is sized to receive a collimator (1000). The lens seating area (915) is sized to receive a focusing lens (1002). A clamping flange (914) extends laterally from the vertical portion (910). When the collimator (1000) is inserted into the upper channel (912), a screw or other component may be secured to the clamp flange (914) so ​​that the vertical portion (910) grips the collimator (1000) and holds the collimator (1000) securely in the upper channel (912). Alternatively, the collimator (1000) may be held in any other suitable manner. The focusing lens (1002) is captured between the collimator (1000) and the closed focusing volume (916). The closed focusing volume (916) defines a conical optical path that tapers toward an opening (918) formed through the lower surface (902) of the body (900). In this embodiment, the sidewall (917) of the closed focusing volume (916) includes a light absorbing material. As described in more detail below, the vertical portion (910) provides for projection of light through an opening (918) along a first axis (A1).

[0217] The lateral portion (920) extends laterally from the vertical portion (910). The lateral portion (920) defines an upper channel (922) and a lower channel (928), with a filter slot (926) blocking the lower channel (928). As shown in FIG. 16, the upper channel (922) is sized to receive the sensing optical fiber (1020). In some versions, the sensing optical fiber (1020) is a multimode fiber. In some such versions, the sensing optical fiber (1020) has a core diameter in the range of about 50 μm to about 400 μm, or about 50 μm. In some other versions, the sensing optical fiber (1020) is a single mode fiber. In some such versions, the sensing optical fiber (1020) has a core diameter in the range of about 2 μm to about 11 μm, or about 5 μm.

[0218] Once the sensing optical fiber (1020) is inserted into the upper channel (922), the screw (924) may be inserted into the lateral portion (920) and tightened, such that the lateral portion (920) secures the sensing optical fiber (1020) and holds the sensing optical fiber (1020) securely within the upper channel (922). In this embodiment, a ferrule (not shown) is positioned around the area of ​​the sensing optical fiber (1020) that is inserted into the lateral portion (920), such that the lateral portion (920) effectively grips the sensing optical fiber (1020) via the ferrule. Alternatively, the sensing optical fiber (1020) may be held in any other suitable manner. The lower channel (928) defines a cylindrical optical path that leads to an opening (929) formed through the lower surface (902) of the body (900). In this embodiment, the lower channel (928) includes a light-absorbing material. As described in more detail below, the lateral portion (920) provides for transmission of received light along the second axis (A2) through the opening (929). As best seen in Figures 19-20, in this embodiment, the openings (918, 929) are spaced apart from one another such that the openings (918, 929) do not overlap one another.

[0219] As shown in FIG. 17, an optical filter (1004) may be inserted into the filter slot (926). The optical filter (1004) may thus filter light received through the opening (929) and the lower channel (928) before such light is further transmitted to the sensing optical fiber (1020) in the upper channel (922). As part of this filtering, the optical filter (1004) may help filter out wavelengths of light associated with ambient illumination. The optical filter (1004) may thus be tuned to match (or otherwise adapt) to the wavelengths of light emitted through the source optical fiber (1010) (i.e., incident light), as described in more detail below. In some variations, the optical filter (1004) may also be used to detect fluorescence (e.g., by filtering out wavelengths of source light). Various suitable forms and configurations that may be used for the optical filter (1004) will be apparent to those of skill in the art in view of the teachings herein.

[0220] The mounting flange (930) extends laterally from the vertical portion (910) adjacent the lateral portion (920). The mounting flange (930) is configured to receive a screw (930) (FIG. 16) to secure the body (900) to a fixture (e.g., the seating mount (154) of the base (180)) so that the body (900) can be fixedly secured to the base (180). In other words, in this embodiment, the body (900) is not secured to the process tip (800). Instead, as shown in FIG. 11, the body (900) can be secured via the mounting flange (930) such that the lower surface (902) of the body (900) is parallel to the upper surface (806) of the process tip (800) and such that the lower surface (902) is spaced a gap distance (d) from the upper surface (806). By way of example only, the gap distance (d) may range from about 0 mm to about 0.5 mm, or may be about 0 mm. Alternatively, any other suitable gap distance (d) may be used. In versions where the gap distance (d) is 0 mm, such that the lower surface (902) of the body (900) contacts the upper surface (806) of the process chip (800), one or both of the lower surface (902) or the upper surface (806) may include complementary surface features (e.g., protrusions and / or recesses) that aid in proper alignment of the body (900) relative to the process chip (800).

[0221] When the body (900) is secured at a gap distance (d) from the upper surface (806), the axes (A1, A2) converge at a convergence point (CP) located within the DLS chamber (870) when processing the chip (800). The location of the convergence point (CP) may be determined by the angle (θ) formed by the axes (A1, A2). By way of mere further example, the angle (θ) formed by the axes (A1, A2) may be in the range of about 10 degrees to about 90 degrees, or in the range of about 10 degrees to about 45 degrees, or about 28.8 degrees. By way of mere further example, the convergence point (CP) may be positioned at a distance in the range of about 1 mm to about 5 mm, or about 1.2 mm away from the lower surface (902).

[0222] As shown in FIG. 16, one end of the light source optical fiber (1010) may be coupled to a collimator (1000). The other end of the light source optical fiber (1010) may be coupled to a coherent light source (1012). By way of example only, the light source (1012) may include a single frequency laser operable to emit light at a wavelength at which the process chip (800) is optically transparent. The light source (1012) may be mounted to the base (180) or otherwise integrated into the system (100). In some versions, the light source (1012) is in communication with a controller (121). For example, the controller (121) may be operable to selectively activate the light source (121) and adjust the intensity of the light generated by the light source (121). Additionally or alternatively, the controller (121) may receive feedback regarding the operation of the light source (121). In some other versions, the light source (121) is controlled and / or monitored independently of the controller (121). In this embodiment, the light generated by the light source (1012) is transmitted along the light source optical fiber (1010) to the collimator (1000). Insofar as the collimated light presents a safety concern to a human operator, it may be beneficial to position the collimator (1000) within the body (900) where the collimated light does not reach the human operator's eye. The collimated light from the collimator (1000) further passes through the focusing lens (1002), through the closed focusing volume (916), and then exits through the opening (918). The projected light finally reaches the DLS chamber (970) as described above.

[0223] 16, one end of the sensing optical fiber (1020) may be secured within the upper channel (922) and the other end of the sensing optical fiber (1020) may be coupled to a photon counter (1022), which may be further coupled to an autocorrelator (1024). The photon counter (1022) and the autocorrelator (1024) may take any suitable form, as will be apparent to one of ordinary skill in the art in view of the teachings herein. When light projected through the aperture (918) is scattered from particles in the fluid within the DLS chamber (970), the scattered light is transmitted through the aperture (929), the lower channel (928), and the optical filter (1004), and finally reaches the sensing optical fiber (1020). The sensing optical fiber (1020) further conveys the light to a photon counter (1022), which counts the photons and communicates corresponding photon counting data to an autocorrelator (1024). The autocorrelator (1024) performs an autocorrelation function on this data to generate an autocorrelation curve as shown in FIGS. 21-22 and described in more detail below. The autocorrelator (1024) may be further coupled to a controller (121) such that the controller (121) may process the autocorrelation data from the autocorrelator (1024) and perform algorithms using at least such data. Examples of processes that may be performed using at least the autocorrelation data are described in more detail below. Although FIG. 16 depicts the autocorrelator (1024) and the controller (121) as separate components, some variations of the controller (121) may directly integrate an autocorrelation module or otherwise provide the autocorrelation functionality. In other words, some versions may not have the autocorrelator (1024) and the controller (121) as separate components.

[0224] FIG. 21 shows a graph (1100) plotting examples of autocorrelation curves (1110, 1120) that may be developed using a DLS stage as described above. In the example shown in FIG. 21, the autocorrelation curve (1110) represents data acquired using a multimode fiber for a sensing optical fiber (1020) that detects DLS in a fluid containing light scattering beads. The autocorrelation curve (1120) represents data acquired using a multimode fiber for a sensing optical fiber (1020) that detects DLS in water (i.e., as a control). In this example, the autocorrelation curve (1110) has a y-intercept at about 0.009. To the extent that the autocorrelation curve (1110) is somewhat irregular or noisy during the very early stages of the period, the autocorrelation curve (1110) quickly transitions to a relatively smooth curve with much less noise.

[0225] FIG. 22 shows a graph (1200) plotting other examples of autocorrelation curves (1210, 1220) that may be developed using a DLS stage as described above. In the example shown in FIG. 22, the autocorrelation curve (1210) represents data acquired using a single mode fiber for the sensing optical fiber (1020) detecting DLS in a fluid containing light scattering beads. The autocorrelation curve (1220) represents data acquired using a multimode fiber for the sensing optical fiber (1020) detecting DLS in a fluid containing light scattering beads. In other words, the autocorrelation curve (1220) of FIG. 22 is similar to the autocorrelation curve (1110) of FIG. 21. In this example, the autocorrelation curve (1220) has a y-intercept at about 0.55, which is much higher than the y-intercepts of the autocorrelation curves (1110, 1220). To the extent that the autocorrelation curve (1220) is somewhat irregular or noisy during the very early stages of the period, the autocorrelation curve (1220) quickly transitions to a relatively smooth curve with much less noise.

[0226] Considering the graphs (1100, 1200) shown in Figures 21-22, using a multimode fiber for the sensing optical fiber (1020) or using a single mode fiber for the sensing optical fiber (1020) may yield acceptable results. To the extent that a single mode fiber may produce a substantially higher y-intercept in its autocorrelation curve (1210), a multimode fiber may still yield a useful and reliable autocorrelation curve (1110).

[0227] C. Example of how to use the dynamic light scattering stage In a method of operating the process chip (800), various fluid components may be communicated through the fluid ports (804) and fluid channels (802) to reach the mixing assembly (820). Such fluid components may include mRNA, surfactants, pH-adjusted buffers, ethanol, water, and / or other components. The output of each mixing assembly (820) may include encapsulated mRNA particles. The valve (854) may be operated to sequentially direct the output of each mixing assembly (820) through the channels (858, 860) towards the DLS stage. When a sample volume of the fluid output of one mixing assembly (820) reaches the DLS chamber (870), light from the light source (1012) may be emitted into the DLS chamber (870) through the light source optical fiber (1010) and associated components of the body (900). In some versions, the flow of fluid in the DLS chamber (870) is stopped during the DLS process such that light from the light source (1012) is emitted into the DLS chamber (870) once the fluid in the DLS chamber (870) reaches a substantially quiescent state. In some other versions, light from the light source (1012) is emitted into the DLS chamber (870) while the fluid in the DLS chamber (870) is in a flowing state.

[0228] When light from the light source (1012) is emitted into the DLS chamber (870), the light may be scattered by particles in the sample volume within the DLS chamber (870), regardless of whether the fluid within the DLS chamber (870) is stationary or flowing. This scattered light may be transmitted through the sensing optical fiber (1020) and associated components of the body (900), and ultimately reach the photon counter (1022). The autocorrelator (1024) may process the corresponding data from the photon counter (1022) and generate an autocorrelation curve similar to those shown in Figures 21-22. The autocorrelation curve may be compared to a baseline curve to determine whether the autocorrelation curve is within an acceptable range. In some versions, this comparison is performed by the controller (121). Determining whether an autocorrelation curve is within tolerance may include determining whether the y-intercept of the curve is at an appropriate level, whether the curve follows a path that is within an acceptable deviation from the path of a baseline curve, how well the curve fits a particular model (e.g., cumulants, etc.), whether the curve descends to values ​​close to zero, the autocorrelation time when a transition occurs, and / or whether the autocorrelation curve meets other criteria.

[0229] If the autocorrelation curve is within an acceptable range, this may indicate that the size and / or size distribution of the particles (e.g., encapsulated mRNA particles, etc.) in the DLS chamber (870) is appropriate, and that the mixing assembly (820) that generated the sample volume in the DLS chamber (870) is operating properly. The process chip (800) may then continue to deliver the output of that mixing assembly (820) to a subsequent stage (e.g., a storage vial in the reagent storage frame (107), another process chip (111, 200, 500), etc.). If the autocorrelation curve is outside of an acceptable range, this may indicate that the size and / or size distribution of the particles (e.g., encapsulated mRNA particles, etc.) in the DLS chamber (870) is inappropriate, and that the mixing assembly (820) that generated the sample volume in the DLS chamber (870) is operating improperly. The process chip (800) may then stop delivering the output of that mixing assembly (820).

[0230] Each DLS measurement process may be performed for any suitable duration. For example, in some versions, from the time the sample volume of fluid reaches the DLS chamber (870), the process of emitting light into the fluid and collecting the scattered light may be performed for a duration ranging from about 1 second to about 60 seconds, or the duration may be about 10 seconds. After DLS is performed on the sample volume of fluid, the sample volume of fluid may be handled in any suitable manner. For example, if DLS indicates that the size and / or size distribution of the particles in the fluid is appropriate, the sample volume may be further communicated to a vial in the reagent storage frame (107), to another process chip (111, 200, 500) for further processing, to a waste reservoir, or elsewhere. If DLS indicates that the size and / or size distribution of the particles in the fluid is inappropriate, the sample volume may be further communicated to a waste reservoir or elsewhere. In some versions, the DLS measurement may be performed several times (e.g., ranging from 1 to 20 times, or specifically 10 iterations). Such repeated measurements may be used to gather statistics, capture time-varying conditions, and the like.

[0231] Regardless of whether the output of a mixing assembly (820) resulted in an acceptable or unacceptable particle size and / or size distribution, the process chip (800) may operate the valve (854) to communicate the output of the next mixing assembly (820) to the DLS stage after the output of the first mixing assembly (820) has been analyzed in the DLS stage. This sequence may continue until the output of each mixing assembly (820) has been analyzed in the DLS stage. Once the output of the last mixing assembly (820) has been analyzed in the DLS stage, the process may begin back with the first mixing assembly (820) and continue the sequence for the duration of the operation of the process chip (800). If any mixing assemblies (820) are shut down due to their outputs failing in the DLS stage, such mixing assemblies (820) may be passed on as the process chip (800) repeats the sequence of testing the mixing assembly (820) outputs in the DLS stage.

[0232] In some cases, it may be desirable to provide some type of spacer or purge fluid through the DLS stage between the outputs of the mixing assemblies (820). For example, air bubbles may be communicated through the DLS chamber (870) between the outputs of the mixing assemblies (820). Additionally or alternatively, some water or some other liquid may be communicated through the DLS chamber (870) between the outputs of the mixing assemblies (820). In either case, the air, water, or other fluid may help purge any particles that may otherwise remain in the DLS chamber (870) before the output of the next mixing assembly (820) reaches the DLS chamber (870).

[0233] In versions in which the process chip (800) includes a pressure sensing region (810) that is part of a pressure sensing stage configured and operable as the pressure sensing stage (700) described above, such a pressure sensing stage can be used in combination with a DLS stage in a number of ways. In some versions, the controller (121) initially monitors only the pressure data from the pressure sensing stage without activating the DLS stage until the pressure data indicates that the pressure level in one or more of the fluidic channels (802) is outside of an acceptable range. For example, if the pressure level in the fluidic channel (802) exceeds a predetermined threshold, this elevated pressure level can indicate that an obstruction has formed (or has formed) in the mixing assembly (820) fed by the fluidic channel (802). If this occurs, the controller (121) can open a valve (854) downstream of that mixing assembly (820) to direct the output from that mixing assembly (820) to the DLS stage for testing. When the output from the mixing assembly (820) reaches the DLS chamber (870), a DLS stage can be used to determine whether the size and / or size distribution of the particles from the mixing assembly (820) is appropriate. If so, the DLS stage can continue to be used to monitor the output of the mixing assembly (820) to determine if and when the particle size and / or size distribution falls outside of an acceptable range (at which point the mixing assembly (820) can be effectively shut down).

[0234] In some other versions where the process chip (800) includes a pressure sensing region (810) that is part of a pressure sensing stage configured and operable as the pressure sensing stage (700) described above, the controller (121) may observe pressure data in response to the DLS stage detecting a particle size and / or size distribution that is outside of an acceptable range. In other words, if the DLS stage determines that the output from the mixing assembly (820) contains an unacceptable particle size and / or size distribution, the controller (121) may observe the fluid pressures of the fluid channels (802) that serve as inlets to that mixing assembly (820) and determine whether any of those fluid channels (802) have fluid pressures that are outside of an acceptable range. For example, if the DLS stage determines that the output from a mixing assembly (820) includes an unacceptable particle size and / or size distribution, the controller (121) may determine that one of the fluid channels (802) feeding that mixing assembly (820) has an unacceptably high fluid pressure, which may indicate that an obstruction has formed (or has formed) in that mixing assembly (820). That mixing assembly (820) may then be effectively shut down and / or treated (e.g., chemically, etc.) to remove the obstruction, such that only other mixing assemblies (820) on that process chip (800) are used thereafter (or until procedures to remove the obstruction are completed). If the DLS stage determines that the output from a mixing assembly (820) includes an unacceptable particle size and / or size distribution, and there are no anomalies in the fluid pressure of the fluid channels (802) feeding that mixing assembly (820), this may indicate that there is some other type of problem (e.g., chemical composition fluctuations, etc.), and appropriate corrective action may be taken.

[0235] Regardless of the order in which the fluid pressure and DLS measurements are taken (i.e., pressure measurement first and then DLS measurement, DLS measurement first followed by fluid pressure measurement, or pressure measurement and DLS measurement in parallel), the controller (121) may provide some degree of artificial intelligence in learning from the correlation between the DLS and fluid pressure measurements. For example, the controller (121) may learn when the fluid pressure level tends to reach a point where the DLS measurements indicate an unacceptable particle size and / or size distribution, thereby causing the controller (121) to proactively shut down the mixing assembly (820) before it produces an unacceptable particle size and / or size distribution. In other words, the controller (121) may adjust the fluid pressure threshold using at least the correlation between the sensed fluid pressure and the detected unacceptable particle size and / or size distribution.

[0236] Regardless of whether or how the pressure data from pressure sensing region 810 is correlated with the DLS data, the pressure data from pressure sensing region 810 may also be used in some versions to vary the input through fluid port 804. For example, if the pressure data at pressure sensing region 810a indicates that the pressure of the fluid in fluid channel 802a is above a certain value, controller 121 may activate pressure source 117 to reduce the pressure of the fluid communicated in port 804a. Similarly, if the pressure data at pressure sensing region 810a indicates that the pressure of the fluid in fluid channel 802a is below a certain value, controller 121 may activate pressure source 117 to increase the pressure of the fluid communicated in port 804a. Thus, the pressure sensing stage in pressure sensing region (810) may be used to provide a feedback loop that allows real-time adjustments to the pressure of the fluid communicated to port (804) to thereby achieve consistency in the desired pressure value.

[0237] In some scenarios, the pressure data from the pressure sensing region (810) is compared to the pressure of the fluid provided by the pressure source (117) to the corresponding fluid channel upstream of the port (804) to determine whether the pressure data from the pressure sensing region (810) deviates acceptably from the pressure in the corresponding fluid channel upstream of the port (804). In this regard, some deviations may be expected, such as the fluid pressure in the pressure sensing region (810) being lower than the fluid pressure in the corresponding fluid channel upstream of the port (804). Similarly, the pressure data from the pressure sensing region (810) may be compared to the fluid pressure provided by the pressure source (117) to the corresponding fluid channel upstream of the port (804) to determine the flow rate of the fluid flowing through the fluid channel (802). Such flow rate data may be particularly useful in scenarios in which DLS is performed on a flowing fluid rather than a stationary one. Further examples of DLS being performed on a flowing fluid are described in more detail below.

[0238] As another example of how pressure sensing stages in pressure sensing region (810) may be used to provide a feedback loop that enables real-time adjustments to the pressure of fluids communicated to ports (804), pressure data from pressure sensing regions (810a, 810b, 810c) associated with a given mixing assembly (820) may be evaluated to ensure that the fluid pressures along channels (802a, 802b, 802c) are properly balanced with one another. Similarly, when pressure data from pressure sensing regions (810a, 810b, 810c) is compared to pressure data from corresponding fluid channels upstream of ports (804a, 804b, 804c) to determine the flow rates through channels (802a, 802b, 802c), the flow rates through channels (802a, 802b, 802c) may be evaluated to ensure that the flow rates through channels (802a, 802b, 802c) are properly balanced with one another. If the fluid pressures and / or flow rates in the channels (802a, 802b, 802c) are not properly balanced with one another, the controller (121) may actuate the pressure source (117) to increase or decrease the pressure of the fluid communicated in any ports (804a, 804b, 804c) where such adjustment is warranted.

[0239] The aforementioned example of pressure data being used in a real-time feedback loop refers to pressure adjustments made via pressure source (117) to increase or decrease the pressure of the fluid communicated to port (804). In some variations, the fluid pressure is generated or otherwise controlled via peristaltic pumping implemented on the process chip (800) (e.g., as described above in the context of process chips (111, 200, 500)). In such variations, controller (121) may adjust the peristaltic pumping action on the process chip (800) in response to pressure data from pressure sensing region (810).

[0240] D. Example of a process chip with multiple dynamic light scattering stages Although FIGS. 9-11 show an arrangement in which only one DLS stage is used with the process chip (800), it may be desirable to provide an arrangement in which the process chip (800) includes several DLS stages. FIGS. 23-24 show an example of such an alternative arrangement. In this example, one body (900) is positioned near a corner of the process chip (800) similar to the arrangement shown in FIGS. 9-11. However, unlike the arrangement shown in FIGS. 9-11, the arrangement shown in FIGS. 23-24 further includes several additional bodies (901), each additional body (901) positioned above a respective mixing assembly (820). These additional bodies (901) may be configured and operable like the body (900) described above. In the arrangement shown in FIGS. 23-24, each body (900, 901) may form part of a corresponding DLS stage as described above. Thus, each mixing assembly (820) has an associated DLS stage in the arrangement shown in Figures 23-24.

[0241] Each body (901) in this example is positioned over a corresponding outlet channel (844) of the mixing assembly (820) associated with the body (901). Thus, each DLS stage associated with each body (901) can be used to measure the size and / or size distribution of particles in the direct output of each mixing assembly (820). In some versions of this arrangement, the DLS stage associated with the body (901) measures the size and / or size distribution of particles in the fluid when the fluid is in a flowing state, while the DLS stage associated with the body (900) measures the size and / or size distribution of particles in the fluid when the fluid is in a stationary state. In other words, the DLS stage associated with the body (901) can be considered to provide a dynamic fluid test, and the DLS stage associated with the body (900) can be considered to provide a static fluid test.

[0242] In some versions of the arrangement shown in Figures 23-24, the DLS stage associated with the body (901) measures the size and / or size distribution of particles in the fluid continuously (i.e., as the fluid continues to flow through the corresponding outlet channel (844)), while the DLS stage associated with the body (900) only measures the size and / or size distribution of particles in the fluid on an ad-hoc basis. For example, a sample volume of fluid may be communicated to the DLS stage associated with the body (900) only if fluid pressure data and / or DLS data (from the DLS stage associated with the body (901)) indicates that there may be a problem with a particular mixing assembly (820). In such a case, the output of this particular mixing assembly (820) may be sent to the DLS stage associated with the body (900) to determine whether the size and / or size distribution of particles produced by the mixing assembly (820) is within acceptable limits.

[0243] As another variation, the DLS stages associated with the body (900) may operate continuously, with the output from the mixing assembly (820) being sequentially communicated to that DLS stage in addition to the continuously operating DLS stage associated with the body (901). In such a scenario, DLS data from the stage associated with the body (900) may be correlated with DLS data from the stage associated with the body (901) that corresponds to the mixing assembly (820) whose output is within the DLS chamber (870). For example, the autocorrelation curves from these DLS stages may be compared to one another, and the controller (121) may determine whether the deviation between these curves is within a predefined tolerance.

[0244] In addition to providing DLS sensing as described above, the above arrangement can also provide laser Doppler velocity measurement. Laser Doppler velocity measurement can be used to help determine flow conditions. As another variation, an adjustable electric field can be used to determine the zeta potential, which indicates particle charge conditions. Since mRNA can have a characteristic charge, such particle charge data can indicate the degree to which mRNA is present in the particle.

[0245] IV. Example of Viscosity Sensing via Dynamic Light Scattering As described above, it may be desirable to monitor the size and / or size distribution of the encapsulated mRNA particles during the process of forming the encapsulated mRNA particles via the process chip (800), since the size and / or size distribution of the encapsulated mRNA particles may tend to change as the process chip (800) is used to form the encapsulated mRNA particles. It may also be desirable to determine and monitor the viscosity of the solution carrying the encapsulated mRNA particles, since the viscosity also tends to change as the process chip (800) is used to form the encapsulated mRNA particles, and the initial viscosity of the fluid may not be known. For example, some solutions may include a combination of mRNA and water (e.g., introduced via fluidic channel (802a)), one or more delivery vehicle molecules in ethanol (e.g., introduced via fluidic channel (802b)), and a diluent or buffer (e.g., introduced via fluidic channel (802c)). A mixture of ethanol and water may produce a significant change in viscosity and thus may be very sensitive to ethanol concentration variations.

[0246] As described in more detail below, the viscosity of the solution can be monitored using a DLS stage as described above. Additionally, the same DLS stage used to monitor the particle size and / or size distribution of the encapsulated mRNA can also be used to monitor the viscosity of the solution carrying the encapsulated mRNA particles.

[0247] In some scenarios, it may be important to determine and monitor the viscosity of the solution, since variations in the viscosity of the solution may tend to produce measurement effects comparable to those produced by variations in particle size of the encapsulated mRNA in the solution, which may be observed by the following equation (I):

[0248]

number

[0249] Therefore, it may be desirable to obtain a measurement of the viscosity of the solution in order to obtain a reliable measurement of the particle size and / or size distribution of the encapsulated mRNA in the solution. The following description provides examples of how the DLS stage described above can be used to measure and monitor the viscosity of a solution carrying encapsulated mRNA particles while simultaneously measuring and monitoring the particle size and / or size distribution of those mRNA particles in the solution. Each of the examples described below provides for the measurement and monitoring of solution viscosity without requiring any contact between the sensor and the solution being measured.

[0250] The following examples describe methods for determining the viscosity of a solution, the size of particles in a solution, and the size distribution of particles in a solution, but the same methods can be used to determine other parameters, such as refractive index or temperature, which can be performed using formula (I) in conjunction with data collected as described below.

[0251] A. Examples of Process Chip Features for Providing Solution Viscosity Measurements As described above with reference to FIG. 13, the process chip (800) may include a pre-DLS stage (890) and a post-DLS stage (892), with the DLS chamber (870) positioned in the fluid path between the pre-DLS stage (890) and the post-DLS stage (892). FIG. 25 shows an example of a measurement stage (1300) component that may be used to effectively form the pre-DLS stage (890) and the post-DLS stage (892). It should therefore be understood that the measurement stage (1300) of FIG. 25 may be incorporated into a process chip such as the process chip (800). The measurement stage (1300) is in fluid communication with a sample inlet channel (1302), a test fluid inlet channel (1304), and an outlet channel (1306). In the context of the process chip (800), the sample inlet channel (1302) may be considered similar to the manifold outlet channel (860), such that the sample inlet channel (1302) receives an aliquot (i.e., sample volume) of a solution carrying encapsulated mRNA particles as output from the mixing stage (820). The test fluid inlet channel (1304) is in fluid communication with a test fluid source (not shown). As described in more detail below, the test fluid may include a fluid containing beads, a diluent without beads (e.g., a buffer fluid, water, etc.), and / or any other suitable type of fluid. The outlet channel (1306) may be considered similar to the outlet channel (896), such that the solution may exit the measurement stage (1300) via the outlet channel (896). By way of example only, the outlet channel (1306) may ultimately lead to a waste storage compartment, some other stage where the solution is utilized to form a therapeutic composition, or some other component.

[0252] The measurement stage (1300) of this example also includes a first valve (1310), a first channel (1312), a first pump (1314), a second valve (1316), a second channel (1318), a third channel (1320), a mixing chamber (1322), a DLS chamber (1324), a fourth channel (1326), a third valve (1328), a fifth channel (1330), a second pump (1332), a sixth channel (1334), and a fourth valve (1336). The valves (1310, 1316, 1328, 1336) of this example may be configured and operable as the valves (824, 854) described above. Thus, the valves (1310, 1316, 1328, 1336) can be transitioned between an open state and a closed state by actuating an elastic layer (such as, for example, elastic layer (302)) of the process chip (800) by selectively applying pressure to (or releasing pressure on) the elastic layer in areas of the process chip (800) corresponding to the valves (1310, 1316, 1328, 1336). Thus, the valves (1310, 1316, 1328, 1336) can be used to selectively block or allow fluid flow. The pumps (1314, 1332) can also be operated by selectively applying pressure to an elastic layer (such as, for example, elastic layer (302)) of the process chip (800) in areas of the process chip (800) corresponding to the pumps (1314, 1332), thereby driving fluid flow through a peristaltic pumping action.

[0253] A first valve (1310) is interposed between the sample inlet channel (1302) and the first channel (1312) such that the first valve (1310) is operable to selectively block or allow fluid flow between the sample inlet channel (1302) and the first channel (1312). The first channel (1312) is further in fluid communication with a first pump (1314). A second valve (1314) is interposed between the test fluid inlet channel (1304) and the second channel (1318) such that the second valve (1314) is operable to selectively block or allow fluid flow between the test fluid inlet channel (1304) and the second channel (1318). The second channel (1318) is further in fluid communication with the first pump (1314). The first pump (1314) is also in fluid communication with a third channel (1320). The first pump (1314) is operable to pump fluid from the sample inlet channel (1302) and / or the test fluid inlet channel (1304) towards the third channel (1320) depending on the state of each respective valve (1310, 1316).

[0254] The third channel (1320) is further in fluid communication with a mixing chamber (1322). The mixing chamber (1322) is configured to mix fluids from the sample inlet channel (1302) and the test fluid inlet channel (1304), which are pumped into the mixing chamber (1322) via the first pump (1314). By way of example only, the mixing chamber (1322) may be configured and operable as any mixing chamber described herein. Alternatively, the mixing chamber (1322) may be configured and operable in any other suitable manner.

[0255] The mixing chamber (1322) leads directly to the DLS chamber (1324). The DLS chamber (1324) may be configured and operable as the DLS chamber (870) described above. Thus, the body (900) may be positioned adjacent to the DLS chamber (870) such that the source optical fiber (1010) may emit light into the DLS chamber (1324) and the sensing optical fiber (1020) may receive light scattered from particles in the fluid in the DLS chamber (1324) as described above. The scattered light may reach the photon counter (1022) and the corresponding data may be processed by the autocorrelator (1024) as described above and in more detail below.

[0256] The DLS chamber (1324) is further in fluid communication with a fourth channel (1326), which leads to a third valve (1328). The third valve (1328) is further in fluid communication with a fifth channel (1330). Thus, the third valve (1328) is operable to selectively block or allow fluid flow between the fourth channel (1326) and the fifth channel (1330). The fifth channel (1330) is further in fluid communication with a second pump (1332). The second pump (1332) is also in fluid communication with a sixth channel (1334). The second pump (1332) is operable to pump fluid from the fifth channel (1330) towards the sixth channel (1334). The second pump (1332) is also operable to pump fluid back towards the fifth channel (1330).

[0257] The sixth channel (1334) is further in fluid communication with a fourth valve (1336), which is also in fluid communication with the outlet channel (1306) such that the fourth valve (1336) is operable to selectively block or allow fluid flow between the sixth channel (1334) and the outlet channel (1306).

[0258] It should be appreciated from the above that the pumps (1314, 1332) can drive fluid from two separate sources to and away from the DLS chamber (1324). Additionally, the valves (1310, 1316, 1328, 1336) can selectively block fluid flow in different respective regions of the process chip (600) in conjunction with the operation of the pumps (1314, 1332). Examples of how the measurement stage (1300) can be used in combination with the DLS components shown in Figures 9-11 and 16-20 to sense viscosity, particle size, and particle size density are described in more detail below.

[0259] B. Example of viscosity sensing using the addition of beads In some scenarios, the viscosity of a solution can be measured by introducing known beads into the solution and then performing DLS on the solution containing the beads. In this context, "known beads" includes beads having a known diameter. As used herein, the term "beads" should not be read as necessarily limited to manufactured spherical structures. For example, "beads" can include other calibrants, such as calibrant molecules of known size. An example of a calibrant bead in the form of a calibrant molecule is dextran. Alternatively, any other suitable type of calibrant molecule (or other calibrant) can be used.

[0260] FIG. 26 shows an example of a process utilizing beads via the measurement stage (1300) shown in FIG. 25. In this example, as shown in block (1400) of FIG. 26, a bead-containing solution and an encapsulated mRNA particle-containing solution are communicated to the measurement stage (1300). This includes opening a first valve (1310) and driving an aliquot of the encapsulated mRNA particle-containing solution through channels (1302, 1312) to a first pump (1314). This also includes opening a second valve (1316) and driving a volume of the bead-containing solution through channels (1304, 1318) to the first pump (1314). In this example, the beads in the bead-containing solution are of a known size, while the encapsulated mRNA particles in the encapsulated mRNA particle-containing solution are of an unknown size and the encapsulated mRNA particle-containing solution is of an unknown viscosity.

[0261] In some scenarios, the encapsulated mRNA particle-containing solution and the bead-containing solution are driven simultaneously to the first pump (1314). In some other scenarios, the encapsulated mRNA particle-containing solution and the bead-containing solution are driven sequentially to the first pump (1314) (e.g., the encapsulated mRNA particle-containing solution is driven first, followed by the bead-containing solution, or the bead-containing solution is driven first, followed by the encapsulated mRNA particle-containing solution). In versions where different solutions are driven sequentially to the first pump (1314), one valve (1310, 1316) can remain closed while the other valve (1310, 1316) is opened.

[0262] Once both solutions reach the first pump (1314), both valves (1310, 1316) may be closed and the first pump (1314) may be actuated to drive the two solutions towards the DLS chamber (1324), as shown in block (1402). The third valve (1328) may remain closed during this part of the process. On the way to the DLS chamber (1324), the solutions pass through the third channel (1320) and the mixing chamber (1322) such that the DLS chamber (1324) receives a mixture of the two solutions.

[0263] At this stage, the first pump (1314) may be deactivated and the valves (1310, 1316, 1328) may remain closed so that the mixture remains in the DLS chamber (1324). With the mixture held in the DLS chamber (1324), the DLS components shown in Figures 9-11 and 16-20 may be activated as described above to perform DLS on the mixture, as shown in block (1404), thereby making a DLS measurement of the mixture. This DLS measurement may include projecting light into the mixture, receiving light scattered by beads and particles in the mixture, and tracking the scattering pattern changes over time as the beads and particles disperse in the liquid by Brownian motion. The DLS data may be used to generate an autocorrelation curve, as shown in block (1406) and also as described in more detail above.

[0264] FIG. 27 shows a graph (1450) including examples of autocorrelation curves (1452, 1454, 1456, 1458) that may be obtained via the DLS chamber (1324). For example, curve (1452) represents an autocorrelation curve generated by an encapsulated mRNA particle-containing solution, where the encapsulated mRNA particles have a relatively small diameter (e.g., about 60 nm). Curve (1458) represents an autocorrelation curve generated by a bead-containing solution, where the beads have a relatively large diameter (e.g., about 600 nm). Curve (1454) represents an autocorrelation curve generated by a mixture of an encapsulated mRNA particle-containing solution and a bead-containing solution. Curve (1456) represents an example of an autocorrelation curve corresponding to a particular single particle size population based on fitting the autocorrelation curve from a two-population solution to a single population model. Curve (1456) implies that the autocorrelation curve obtained from a solution containing two populations is different from the autocorrelation curve of a solution containing a monodisperse (single) population.

[0265] Returning to the process shown in FIG. 26, using the data from the autocorrelation curve, the next step may include applying the data to equation (II) below to determine the viscosity of the solution containing the encapsulated mRNA particles, as shown in block (1408).

[0266]

number

[0267] The "Γ" and "Γ" values ​​of formula (II) can each independently be consistent with formula (I), with larger "Γ" values ​​corresponding to larger known bead diameters. Thus, formula (I) can be effectively rewritten as formula (III) below:

[0268]

number

[0269] Thus, as shown in block (1408), equation (III) may be solved to determine the viscosity of the mixture. It should be understood that this represents the viscosity of the combination of the encapsulated mRNA particle-containing solution and the bead-containing solution. It should also be understood that in this example, beads of known size are used as a calibration tool to determine the viscosity.

[0270] Once the viscosity of the mixture has been determined, the size of the encapsulated mRNA particles can be determined using formula (IV) below.

[0271]

number

[0272] Once the viscosity of the mixture and the particle size of the encapsulated mRNA have been determined according to blocks (1408, 1410), the third valve (1328) may be transitioned to an open state and the first pump (1324) may be actuated to drive the mixture through the fourth channel (1326) and the fifth channel (1330) to the second pump (1332). The fourth valve (1336) may be transitioned to an open state and the second pump (1332) may be actuated to drive the mixture through the sixth channel (1334) to the outlet channel (1306). In some versions, the mixture is received in a waste storage compartment after exiting the measurement stage (1300) through the outlet channel (1306). In some other versions, the mixture is utilized to form a therapeutic composition after exiting the measurement stage (1300) through the outlet channel (1306). Alternatively, the mixture may be handled in any other suitable manner after exiting the measurement stage (1300) via the outlet channel (1306).

[0273] The process described above with reference to Figures 26-27 may be repeated to test different aliquots of the encapsulated mRNA particle-containing solution. In some versions, the valve (854) operates to sequentially direct the output of each mixing assembly (820) towards the measurement stage (1300). The measured encapsulated mRNA particle size and / or particle size distribution may be compared against a threshold or predefined range to determine whether the actual encapsulated mRNA particle size and / or particle size distribution is within an acceptable range. This comparison may indicate whether the mixing assembly (820) that produced the aliquot processed through the measurement stage (1300) is operating correctly. If the encapsulated mRNA particle size and / or particle size distribution is outside the acceptable range, this may indicate that the encapsulated mRNA particle size and / or size distribution in the measurement stage (1300) is improperly encapsulated and / or the mixing assembly (820) that produced the aliquot in the measurement stage (1300) is operating improperly. The process chip (800) may then stop delivering the output of its mixing assembly (820).

[0274] Regardless of whether the output of a mixing assembly (820) resulted in an acceptable or unacceptable particle size and / or size distribution, the process chip (800) may operate the valve (854) to communicate the output of the next mixing assembly (820) to the measurement stage (1300) after the output of the first mixing assembly (820) has been analyzed in the measurement stage (1300) according to the process described above with reference to Figures 26-27. This sequence may continue until the output of each mixing assembly (820) has been analyzed in the measurement stage (1300). Once the output of the last mixing assembly (820) has been analyzed in the measurement stage (1300), the process may begin again back with the first mixing assembly (820) and continue the sequence for the duration of operation of the process chip (800). If any mixing assemblies (820) are shut down due to their outputs failing in the measurement stage (1300), such mixing assemblies (820) may be passed as the process chip (800) repeats the sequence of testing the mixing assembly (820) outputs in the measurement stage (1300).

[0275] As described above with reference to Figures 26-27, in some variations of the measurement stage (1300) in which beads of known size are used as a calibration tool for measuring the viscosity of a solution, the second pump (1332) and either the third valve (1328) or the fourth valve (1336) are omitted. In other words, the process described above using beads of known size as a calibration tool for measuring the viscosity of a solution can be performed without the second pump (1332) and either the third valve (1328) or the fourth valve (1336). The process described above using beads of known size as a calibration tool for measuring the viscosity of a solution can also be performed using other variations of the measurement stage (1300), such that the features and arrangements shown in Figure 25 are not necessarily the only features and arrangements that can be used to perform this process.

[0276] In addition to the above teachings specifically provided in the context of the measurement stage (1300) and Figures 26-27, versions of the process chip (800) that include the measurement stage (1300) can be operated in accordance with other teachings provided above with respect to the operation of the process chip (800).

[0277] The process shown in FIG. 26, as well as other calculations and algorithms performed as described herein, may be performed by a controller (121). This may include the controller (121) operating components that drive the valves (1310, 1316, 1328, 1336), pumps (1314, 1332), and DLS components shown in FIGS. 9-11 and 16-20. This may also include the controller (121) processing the autocorrelation data from the autocorrelator (1024) to generate an autocorrelation curve and performing the calculations associated with blocks (1408, 1410) described above. Of course, the controller (121) may perform various other functions related to the process shown in FIG. 26, including, but not limited to, other functions expressly described herein.

[0278] C. Example of Viscosity Sensing Using Serial Dilution In addition to or instead of using beads of known size as a calibration tool to measure the viscosity of a solution, the viscosity of a solution may be measured by providing a controlled serial dilution of the solution and tracking the change in the solution based on the serial dilution. An example of such a serial dilution process is shown in FIG. 28. In this example, as shown in block (1500), an aliquot of the encapsulated mRNA particle-containing solution is communicated toward the DLS chamber (1324) and an initial DLS measurement is obtained. This involves opening the first valve (1310) and driving the aliquot of the encapsulated mRNA particle-containing solution through channels (1302, 1312) toward the first pump (1314). When the aliquot reaches the first pump (1314), the first valve (1310) is closed and then the first pump (1314) is activated to drive the aliquot through channel (1320) and the mixing chamber (1322) into the DLS chamber (1324). The third valve (1328) may remain closed during this portion of the process. Alternatively, the third valve (1328) may be open and the aliquot may reside in the mixing chamber (1322), DLS chamber (1324), and second pump (1332). With at least a portion of the aliquot held in the DLS chamber (1324), the DLS components shown in Figures 9-11 and 16-20 may be actuated as described above to perform DLS on the aliquot, thereby taking an initial or baseline DLS measurement of the aliquot.

[0279] Once an initial DLS measurement of the aliquot has been taken, a diluent is added to the aliquot, as shown in block (1502). By way of example only, the diluent may include a buffer or any other suitable type of diluent. Additionally, the viscosity of the diluent may be known. This portion of the process may include opening the second valve (1316) and driving a first volume of diluent through channels (1304, 1318) toward the first pump (1314). In some versions, the first volume of diluent exceeds the capacity of the first pump (1314) such that at least a portion of the first volume of diluent is communicated past the first pump (1314) in the measurement stage (1300). Once the first volume of diluent is introduced into the measurement stage (1300), the second valve (1316) is closed and then the first pump (1314) is actuated to drive the first volume of diluent through the channel (1320) and the mixing chamber (1322) into the DLS chamber (1324) such that the first volume of diluent mixes with the aliquot of encapsulated mRNA particle-containing solution in the DLS chamber (1324). In some versions, the combined volume of the first volume of diluent and the aliquot of encapsulated mRNA particle-containing solution is approximately equal to the combined volume of the mixing chamber (1322), the DLS chamber (1324), the at least one pump (1314, 1332), and the channels (1320, 1326, 1330).

[0280] To further mix the first volume of diluent with the aliquot of encapsulated mRNA particle-containing solution, the pumps (1314, 1332) can be operated sequentially for a predetermined number of iterations. For example, the valves (1310, 1316, 1336) can be held closed while the valve (1328) is held open, and then the first pump (1314) can be operated to drive the mixture toward the second pump (1332). The second pump (1332) can then be operated to drive the mixture back toward the first pump (1314). In this manner, the pumps (1314, 1332) can be alternately operated any suitable number of times. As the mixture flows between the pumps (1314, 1332), the mixture can flow repeatedly through the mixing chamber (1322), which can further facilitate mixing of the first volume of diluent with the aliquot of encapsulated mRNA particle-containing solution.

[0281] Once the first volume of diluent has been suitably mixed with the aliquot of encapsulated mRNA particle-containing solution, even in scenarios where the pumps (1314, 1332) are not alternately actuated to further mix the first volume of diluent with the aliquot of encapsulated mRNA particle-containing solution, the mixture may be retained within the DLS chamber (1324) and the DLS components shown in Figures 9-11 and 16-20 may be actuated as described above to perform DLS on the mixture, as shown in block (1504), thereby taking a DLS measurement of the mixture. This DLS measurement may include projecting light into the mixture, receiving light scattered by beads and particles in the mixture, and tracking the scattering pattern changes over time as the beads and particles disperse in the liquid by Brownian motion. The DLS data may be used to generate an autocorrelation curve, as shown in block (1506) and also as described in more detail above.

[0282] Thereafter, some additional volume of diluent may be added to the mixture to further dilute the mixture. Each additional volume of diluent may be the same volume as the first volume of diluent. Each additional volume of diluent may also be added (and mixed) to the previously formed mixture of diluent and aliquot according to the procedure described above. Thus, part of the process includes determining whether an additional volume of diluent should be added, as shown in block (1508). In some versions, the additional volume of diluent is added (block (1502)), a corresponding DLS measurement is taken (block (1504)), and a corresponding autocorrelation curve is fitted (block (1506)) a predetermined number of times. In some other versions, the data obtained through the DLS measurement process is monitored to determine whether sufficient data has been obtained, whereby the number of iterations of dilution, DLS measurement, and autocorrelation curve fitting may vary from process to process.

[0283] In versions where a predetermined number of iterations are used, the controller (121) or some other component may track the number of times that additional volumes of diluent have been added, as shown in block (1506), and ensure that additional volumes of diluent are added, corresponding DLS measurements are taken (block (1504)), and corresponding autocorrelation curves are fitted (block (1506)) until the predetermined number of diluent volumes have been added. Similarly, the controller (121) may track data obtained throughout the DLS measurement process to determine whether sufficient data has been obtained, and may stop further iterations when the controller (121) determines that sufficient data has been obtained. In either scenario, the controller (121) or some other component may drive a subroutine of serial dilution, corresponding DLS measurements, and corresponding autocorrelation curve fitting. In some versions, each iteration of dilution (block (1502)) results in a 50% dilution. Alternatively, any other suitable duration rate may be used, but it may still be beneficial to provide the same dilution rate for each and every iteration of dilution.

[0284] Once an appropriate number of diluent volumes have been added (e.g., the dilution operation (block (1502)) has been repeated a predetermined number of times or data indicates that no further iterations are necessary), a corresponding DLS measurement has been taken (block (1504)), and a corresponding autocorrelation curve has been fitted (block (1506)), the viscosity of the diluted mixture can be determined, as shown in block (1510). In this example, the encapsulated mRNA particles are carried in a fluid medium containing ethanol, such that the encapsulated mRNA particle-containing solution contains the encapsulated mRNA particles and ethanol, while the diluent contains water. Alternatively, any other suitable fluid medium can be used to carry the encapsulated mRNA particles, and any other fluid can be used as the diluent. Returning to this example, the exact amount of ethanol in the encapsulated mRNA particle-containing solution may be unknown, but the amount of ethanol in the encapsulated mRNA particle-containing solution may be assumed to be approximately a constant amount (e.g., about 15%). The viscosity of the mixture can increase linearly with the ethanol concentration, as shown in formula (V) below:

[0285]

number

[0286] With the viscosity of the mixture determined as described above using equation (V), the next step in the process involves solving for the encapsulated mRNA particle size, as shown in block (1512). To that end, since the concentration of ethanol in the mixture decreases by a known factor ("f") with each iteration of dilution (block (1502)), the autocorrelation gamma value ("Γ") versus the number of dilutions is i") may be determined according to formula (VI) below:

[0287]

number

[0288] In this example, the value "A" may allow for the determination of the size of the encapsulated mRNA particles in the aliquot, and the value "C" may allow for the determination of the concentration of ethanol in the aliquot.

[0289] FIG. 29 shows the relationship between “Γ” and i 15 shows a graph (1550) including an example curve (1552) plotting example values ​​of "Γ", where each iteration of dilution (block 1502) results in a dilution ratio of 50%. As shown, iThe value of " increases substantially from about the third dilution (block 1502) iteration to about the ninth dilution iteration, and then reaches a substantial plateau beginning at about the tenth dilution (block (1502)) iteration. Thus, in this example, the dilution (block (1502)) may be repeated about three to nine times, and it may be determined that additional dilution (block (1502)) iterations would not necessarily be beneficial. It should be understood that this is merely a illustrative example, and different processes may warrant more or fewer iterations of dilution (block (1502)).

[0290] With the above in mind, each iteration of the dilution step (block (1502)) reduces the concentration of the sample in the measurement stage (1300) by a known factor characteristic of the design of the measurement stage (1300), which may increase or decrease depending on the volumes of the pumps (1314, 1332), the mixing chamber (1322), the DLS chamber (1324), etc.

[0291] The process described above with reference to Figures 28-29 may be repeated to test different aliquots of the encapsulated mRNA particle-containing solution. In some versions, the valve (854) operates to sequentially direct the output of each mixing assembly (820) towards the measurement stage (1300). The measured encapsulated mRNA particle size and / or particle size distribution may be compared against a threshold or predefined range to determine whether the actual encapsulated mRNA particle size and / or particle size distribution is within an acceptable range. This comparison may indicate whether the mixing assembly (820) that produced the aliquot processed through the measurement stage (1300) is operating correctly. If the encapsulated mRNA particle size and / or particle size distribution is outside the acceptable range, this may indicate that the encapsulated mRNA particle size and / or size distribution in the measurement stage (1300) is improperly encapsulated and / or the mixing assembly (820) that produced the aliquot in the measurement stage (1300) is operating improperly. The process chip (800) may then stop delivering the output of its mixing assembly (820).

[0292] Regardless of whether the output of a mixing assembly (820) resulted in an acceptable or unacceptable particle size and / or size distribution, the process chip (800) may operate the valve (854) to communicate the output of the next mixing assembly (820) to the measurement stage (1300) after the output of the first mixing assembly (820) has been analyzed in the measurement stage (1300) according to the process described above with reference to Figures 28-29. This sequence may continue until the output of each mixing assembly (820) has been analyzed in the measurement stage (1300). Once the output of the last mixing assembly (820) has been analyzed in the measurement stage (1300), the process may begin again back with the first mixing assembly (820) and continue the sequence for the duration of operation of the process chip (800). If any mixing assemblies (820) are shut down due to their outputs failing in the measurement stage (1300), such mixing assemblies (820) may be passed as the process chip (800) repeats the sequence of testing the mixing assembly (820) outputs in the measurement stage (1300).

[0293] In addition to the above teachings specifically provided in the context of the measurement stage (1300) and Figures 28-29, versions of the process chip (800) that include the measurement stage (1300) may operate in accordance with other teachings provided above with respect to the operation of the process chip (800).

[0294] The process shown in FIG. 28, as well as other calculations and algorithms performed as described herein, may be performed by a controller (121). This may include the controller (121) operating components that drive the valves (1310, 1316, 1328, 1336), pumps (1314, 1332), and DLS components shown in FIGS. 9-11 and 16-20. This may also include the controller (121) processing the autocorrelation data from the autocorrelator (1024) to generate an autocorrelation curve and performing the calculations associated with blocks (1408, 1410) described above. Of course, the controller (121) may perform various other functions related to the process shown in FIG. 28, including, but not limited to, other functions expressly described herein.

[0295] V.Other The foregoing description is provided to enable one skilled in the art to practice the various configurations described herein. While the subject technology has been specifically described with reference to various figures and configurations, it should be understood that these are for illustrative purposes only and should not be construed as limiting the scope of the subject technology.

[0296] There may be many other ways to implement the subject technology. Various functions and elements described herein may be partitioned differently than shown without departing from the scope of the subject technology. Various modifications to these implementations may be readily apparent to those skilled in the art, and the general principles defined herein may be applied to other implementations. Thus, many changes and modifications may be made to the technology by those skilled in the art without departing from the scope of the subject technology. For example, a different number of a given module or unit may be used, one or more different types of a given module or unit may be used, a given module or unit may be added, or a given module or unit may be omitted.

[0297] In this specification, when a feature or element is referred to as being "on" another feature or element, it may be directly on the other feature or element, or there may be intervening features and / or elements. In contrast, when a feature or element is referred to as being "directly on" another feature or element, there are no intervening features or elements. When a feature or element is referred to as being "connected," "attached," or "coupled" to another feature or element, it may be directly connected, attached, or coupled to the other feature or element, or there may be intervening features or elements. In contrast, when a feature or element is referred to as being "directly connected," "directly attached," or "directly coupled" to another feature or element, there are no intervening features or elements. Although described or illustrated with respect to one embodiment, the features and elements so described or illustrated may be applied to other embodiments. It will also be understood by those skilled in the art that references to structures or features disposed "adjacent" to another feature may have portions that overlap or underlie the adjacent feature.

[0298] The terms used herein are for the purpose of describing particular embodiments only and are not intended to be limiting of the present invention. For example, as used herein, the singular forms "a," "an," and "the" are intended to include the plural forms unless the context clearly indicates otherwise. As used herein, the term "and / or" includes any and all combinations of one or more of the associated listed items and may be abbreviated as " / ."

[0299] Spatially relative terms such as "under," "below," "lower," "over," "upper," and the like may be used herein for ease of description to describe the relationship of one element or feature to another element or feature as shown in the figures. It will be understood that the spatially relative terms are intended to encompass different orientations of the device in use or operation in addition to the orientation shown in the figures. For example, if the device in the figures were inverted, an element described as "under" or "beneath" the other element or feature would be oriented "over" the other element or feature. Thus, the term "under" may encompass both an orientation above and below. The device may be oriented differently (rotated 90 degrees or at other orientations) and the spatially relative descriptors used herein will be interpreted accordingly. Similarly, terms such as "upward," "downward," "vertically," "horizontally," and the like are used herein for descriptive purposes only, unless specifically indicated otherwise.

[0300] The term "perpendicular" as used herein should be understood to include an arrangement in which two objects, axes, planes, surfaces, or other things are oriented such that the two objects, axes, planes, surfaces, or other things together define an angle of 90 degrees. The term "perpendicular" as used herein should also be understood to include an arrangement in which two objects, axes, planes, surfaces, or other things are oriented such that the two objects, axes, planes, surfaces, or other things together define an angle that is approximately 90 degrees (e.g., an angle in the range of 85 degrees to 90 degrees). Thus, the term "perpendicular" as used herein should not be read as necessarily requiring that the two objects, axes, planes, surfaces, or other things be oriented such that the two objects, axes, planes, surfaces, or other things together define an angle of exactly 90 degrees.

[0301] The terms "first" and "second" may be used herein to describe various features / elements (including steps), but these features / elements should not be limited by these terms unless the context indicates otherwise. These terms may be used to distinguish one feature / element from another. Thus, a first feature / element discussed below may be referred to as a second feature / element, and similarly, a second feature / element discussed below may be referred to as a first feature / element, without departing from the teachings of the present invention.

[0302] Throughout this specification and the appended claims, unless the context requires otherwise, the word "comprise" and variations such as "comprises" and "comprising" mean that various components may be used jointly in methods and articles (e.g., compositions and apparatus, including devices and methods). For example, the term "comprising" will be understood to mean the inclusion of any described element or step, but not the exclusion of any other element or step. Generally, any of the apparatus and methods described herein should be understood to be inclusive, although all or a subset of the elements and / or steps may alternatively be exclusive, and various elements, steps, sub-components, or sub-steps may be expressed as "consisting of" or alternatively as "consisting essentially of."

[0303] As used in this specification and claims, including as used in the examples, unless expressly specified otherwise, all numbers may be read as if preceded by the word "about" or "approximately" even if the word does not explicitly appear. The phrase "about" or "approximately" may be used when describing a size and / or location to indicate that the described value and / or location is within a reasonable expected range of value and / or location. For example, a numerical value may have a value that is + / -0.1% of the stated value (or range of values), + / -1% of the stated value (or range of values), + / -2% of the stated value (or range of values), + / -5% of the stated value (or range of values), + / -10% of the stated value (or range of values), etc. Any numerical value given herein should be understood to include about that value, or approximately that value, unless the context dictates otherwise. For example, if the value "10" is disclosed, then "about 10" is also disclosed. Any numerical range recited herein is intended to include all subranges subsumed therein.

[0304] It is also understood that when a value is disclosed as being "less than or equal to" that value, "greater than or equal to" and possible ranges between the values ​​are also disclosed, as would be understood by one of ordinary skill in the art. For example, if a value "X" is disclosed, "less than or equal to X" as well as "greater than or equal to X" (e.g., where X is a numeric value) are also disclosed. It is also understood that throughout this application, data is provided in several different formats, and this data represents endpoints and starting points, as well as ranges for any combination of the data points. For example, if a specific data point "10" and a specific data point "15" are disclosed, it is understood that greater than 10 and 15, greater than or equal to 10 and 15, less than 10 and 15, less than or equal to 10 and 15, and equal to 10 and 15 are considered to be disclosed, as well as between 10 and 15. It is also understood that each unit between two specific units is also disclosed. For example, if 10 and 15 are disclosed, then 11, 12, 13, and 14 are also disclosed.

[0305] As used herein, the terms "system," "apparatus," and "device" may be read as interchangeable. A system, apparatus, and device may each include multiple components having various types of structural and / or functional relationships with each other.

[0306] Some versions of the examples described herein may be implemented using a computer system that may include at least one processor that communicates with several peripheral devices via a bus subsystem. Versions of the examples described herein that are implemented using a computer system may be implemented using a general-purpose computer that is programmed to perform the methods described herein. Alternatively, versions of the examples described herein that are implemented using a computer system may be implemented using a special-purpose computer that is constructed with hardware arranged to perform the methods described herein. Versions of the examples described herein may also be implemented using a combination of at least one general-purpose computer and at least one special-purpose computer.

[0307] In a version implemented using a computer system, each processor may include the computer system's central processing unit (CPU), a microprocessor, an application-specific integrated circuit (ASIC), other types of hardware components, and combinations thereof. A computer system may include multiple types of processors. Peripheral devices of a computer system may include, for example, storage subsystems, including memory devices and file storage subsystems, user interface input devices, user interface output devices, and a network interface subsystem. The input and output devices may enable user interaction with the computer system. The network interface subsystem may provide an interface to an external network, including interfaces to corresponding interface devices in other computer systems. User interface input devices may include pointing devices such as keyboards, mice, trackballs, touchpads, or graphics tablets, scanners, touch screens integrated into displays, audio input devices such as voice recognition systems and microphones, and other types of input devices. In general, the use of the term "input device" is intended to include all possible types of devices and methods for inputting information into a computer system.

[0308] In a version implemented using a computer system, the user interface output devices may include a display subsystem, a printer, a fax machine, or a non-visual display such as an audio output device. The display subsystem may include a flat panel device such as a cathode ray tube (CRT), a liquid crystal display (LCD), a projection device, or some other mechanism for creating a visible image. The display subsystem may also provide non-visual displays such as an audio output device. In general, use of the term "output device" is intended to include all possible types of devices and methods for outputting information from the computer system to a user or to another machine or computer system.

[0309] In a version implemented using a computer system, the storage subsystem may store programming and data structures that provide some or all of the functionality of the modules and methods described herein. These software modules may generally be executed by the processor of the computer system alone or in combination with other processors. The memory used in the storage subsystem may include several memories, including a main random-access memory (RAM) for storing instructions and data during program execution, and a read only memory (ROM) in which fixed instructions are stored. The file storage subsystem may provide persistent storage for program and data files and may include a hard disk drive, a floppy disk drive with associated removable media, a CD-ROM drive, an optical drive, or a removable media cartridge. Modules that implement the functionality of a particular implementation may be stored by the file storage subsystem in the storage subsystem or in other machines accessible by the processor.

[0310] In versions implemented using a computer system, the computer system itself may be of various types, including a personal computer, a portable computer, a workstation, a computer terminal, a network computer, a television, a mainframe, a server farm, a widely distributed set of loosely networked computers, or any other data processing system or user device. Due to the ever-changing nature of computers and networks, the examples of computer systems described herein are intended only as specific examples for purposes of illustrating the disclosed technology. Many other configurations of computer systems are possible, having more or fewer components than the computer systems described herein.

[0311] As an article of manufacture rather than a method, a non-transitory computer readable medium (CRM) may be loaded with program instructions executable by a processor. The program instructions, when executed, implement one or more of the computer-implemented methods described above. Alternatively, the program instructions may be loaded into a non-transitory CRM and, when combined with appropriate hardware, may become one or more components of a computer-implemented system that practices the disclosed methods.

[0312] Underlined and / or italicized headings and subheadings are used for convenience only, do not limit the subject technology, and are not referred to in connection with interpreting the description of the subject technology. All structural and functional equivalents to the elements of the various implementations described throughout this disclosure that are known or that later become known to those skilled in the art are expressly incorporated herein by reference and are intended to be encompassed by the subject technology. Furthermore, nothing disclosed herein is intended to be made available to the public, regardless of whether such disclosure is expressly set forth in the description above.

[0313] It should be understood that all combinations of the foregoing concepts, and additional concepts discussed in more detail below (provided that such concepts are not mutually inconsistent), are contemplated as part of the inventive subject matter disclosed herein. In particular, all combinations of claimed subject matter appearing at the end of this disclosure are contemplated as part of the inventive subject matter disclosed herein.

Claims

1. An apparatus comprising: A process chip, the process chip comprising: A first outer surface; A second outer surface; and a process chip including a fluid chamber positioned between the first exterior surface and the second exterior surface, the fluid chamber including a fluid chamber inlet and a fluid chamber outlet, and an optically transparent material positioned between the first exterior surface and the fluid chamber; A dynamic light scattering assembly, the process chip being removably positioned relative to the dynamic light scattering assembly, the dynamic light scattering assembly comprising: a body including a first port and a second port, the body positioned proximate to the first exterior surface; a first optical fiber coupled to the first port of the body, the first optical fiber emitting light, the first port directing the light emitted by the first optical fiber through the optically transparent material and into the fluid chamber; and a second optical fiber coupled to the second port of the body, the second optical fiber at the second port being oriented at an angle relative to the first optical fiber at the first port, the second optical fiber receiving light scattered by particles in the fluid in the fluid chamber in response to the first optical fiber emitting light into the fluid chamber.

2. 10. The device of claim 1, wherein the fluid chamber has a cylindrical shape having a circular upper inner surface, a circular lower inner surface, and an interior sidewall extending from the circular upper inner surface to the circular lower inner surface.

3. The apparatus of claim 2 , wherein the fluid chamber inlet is positioned in an area of ​​the interior sidewall near the circular lower inner surface.

4. 4. The device of claim 2 or 3, wherein the fluid chamber outlet is positioned in a region of the interior sidewall proximate the circular upper inner surface.

5. 2. The apparatus of claim 1, wherein the process chip further comprises a first mixing stage, the first mixing stage mixing a first plurality of fluid components to form a first fluid mixture, and the fluid chamber inlet receiving the first fluid mixture.

6. 6. The apparatus of claim 5, wherein the first mixing stage includes a first mixing inlet, a second mixing inlet, and a first mixing outlet, the first mixing inlet receiving a first fluid component, the second mixing inlet receiving a second fluid component, and the first mixing outlet outputs the first fluid mixture, the first fluid mixture including at least the first fluid component and the second fluid component.

7. The process chip comprises: a first pressure sensor for sensing a pressure of the first fluid component entering the first mixing inlet; 7. The apparatus of claim 6, further comprising: a second pressure sensor for sensing a pressure of the second fluid component entering the second mixing inlet.

8. The apparatus of claim 7 , further comprising a processor, wherein the processor receives data from the dynamic light scattering assembly, the first pressure sensor, and the second pressure sensor.

9. The apparatus of claim 8 , wherein the processor further correlates the data received from the dynamic light scattering assembly, the first pressure sensor, and the second pressure sensor.

10. The apparatus of claim 6 , wherein the process chip further comprises an additional fluid channel fluidly coupled with the first mixing outlet.

11. 11. The apparatus of claim 10, wherein the process chip provides fluid communication from the first mixing outlet to either the additional fluid channel, the fluid chamber inlet, or a combination of the additional fluid channel and the fluid chamber inlet.

12. The apparatus of claim 10 , wherein the process chip provides fluid communication from the additional fluid channel to the fluid chamber inlet via the first mixing outlet.

13. 7. The apparatus of claim 5 or 6, wherein the process chip further comprises a second mixing stage having a second mixing outlet, the second mixing stage mixing a second plurality of fluid components to form a second fluid mixture, and the fluid chamber inlet receiving the second fluid mixture from the second mixing outlet.

14. 14. The apparatus of claim 13, wherein the process chip further comprises at least one valve, the at least one valve regulating fluid flow from the first and second mixing outlets to the fluid chamber inlet such that the fluid chamber inlet selectively receives only one of the first fluid mixture or the second fluid mixture at a time.

15. 14. The apparatus of claim 13, wherein the process chip further comprises a manifold, the manifold directing fluid from the first and second mixing outlets to the fluid chamber inlet.

16. The apparatus of claim 1 or 2, wherein the process chip has a square shape having four corners, and the dynamic light scattering assembly is positioned at one of the four corners.

17. 3. The apparatus of claim 1 or 2, wherein the dynamic light scattering assembly further comprises a collimator within the first port, the collimator being interposed between an end of the first optical fiber and the first exterior surface.

18. 20. The apparatus of claim 17, wherein the first port further comprises a focal volume interposed between the collimator and the first outer surface.

19. The apparatus of claim 18 , wherein the focal volume defines a cone shape.

20. 20. The apparatus of claim 18, wherein the dynamic light scattering assembly further comprises a focusing lens interposed between the collimator and the focal volume.

21. 3. The apparatus of claim 1 or 2, wherein the dynamic light scattering assembly further comprises an optical filter in the second port, the optical filter being interposed between the end of the second optical fiber and the first exterior surface.

22. 22. The apparatus of claim 21, wherein the body further defines a channel interposed between the optical filter and the first exterior surface.

23. 3. The device of claim 1 or 2, wherein the body includes a tip-facing surface opposite the first exterior surface, the tip-facing surface defining a first opening and a second opening, the first port directing the light emitted by the first optical fiber through the first opening to reach the optically transparent material, and the second optical fiber receiving scattered light via the second opening.

24. 24. The apparatus of claim 23, wherein the chip-facing surface is spaced from the first outer surface by a gap distance.

25. 3. The apparatus of claim 1, further comprising a processor, the processor determining one or both of: a size of particles in a fluid in the fluid chamber using data from at least the dynamic light scattering assembly; or a size distribution of particles in a fluid in the fluid chamber using data from at least the dynamic light scattering assembly.

26. 26. The apparatus of claim 25, wherein the processor uses autocorrelation to determine one or both of: a size of particles in a fluid in the fluid chamber using data from at least the dynamic light scattering assembly; or a size distribution of particles in a fluid in the fluid chamber using data from at least the dynamic light scattering assembly.

27. 3. The apparatus of claim 1 or 2, wherein the process tip forms particles containing encapsulated nucleotides.

28. 28. The device of claim 27, wherein the encapsulated nucleotide comprises encapsulated mRNA.

29. 28. The device of claim 27, wherein the nucleotide is encapsulated in a surfactant.

30. An apparatus comprising: A process chip, the process chip comprising: A first outer surface; A second outer surface; and a fluid chamber positioned between the first exterior surface and the second exterior surface, the fluid chamber including a fluid chamber inlet and a fluid chamber outlet; and an optically transparent material positioned between the first exterior surface and the fluid chamber. a mixing stage for mixing a plurality of fluid components to form a fluid mixture, the fluid chamber inlet receiving the fluid mixture, the fluid mixture including particles; a plurality of pressure sensors for sensing pressures of fluid components entering the mixing stage; and an apparatus comprising: a dynamic light scattering assembly, the process chip being removably positioned relative to the dynamic light scattering assembly, the dynamic light scattering assembly emitting light through the light-transmitting material into the fluid chamber and receiving light scattered from particles in the fluid mixture in the fluid chamber;

31. 31. The apparatus of claim 30, further comprising a processor that receives data from the dynamic light scattering assembly.

32. 32. The apparatus of claim 31 , wherein the processor determines one or both of: a size of particles in a fluid in the fluid chamber using data from at least the dynamic light scattering assembly; or a size distribution of particles in a fluid in the fluid chamber using data from at least the dynamic light scattering assembly.

33. 33. The apparatus of claim 31 or 32, wherein the processor further receives data from the plurality of pressure sensors.

34. 34. The apparatus of claim 33, wherein the processor uses data from at least the plurality of pressure sensors to determine if the mixing stage has a flow restriction.

35. 34. The apparatus of claim 33, wherein the processor further correlates the data received from the dynamic light scattering assembly and the plurality of pressure sensors.

36. An apparatus comprising: A process chip, the process chip comprising: A first outer surface; A second outer surface; and a first mixing stage having a first mixing outlet, the first mixing stage mixing a first plurality of fluid components to form a first fluid mixture and communicating the first fluid mixture out through the first mixing outlet, the first fluid mixture including particles; a second mixing stage having a second mixing outlet, the second mixing stage mixing a second plurality of fluid components to form a second fluid mixture and communicating the second fluid mixture out through the second mixing outlet, the second fluid mixture including particles; A process chip including: a first dynamic light scattering assembly positioned near the first mixing stage, the first dynamic light scattering assembly emitting light into the first fluid mixture and receiving light scattered from particles in the first fluid mixture; and a second dynamic light scattering assembly positioned near the second mixing stage, the second dynamic light scattering assembly emitting light into the second fluid mixture and receiving light scattered from particles in the second fluid mixture, the process chip being removably positioned relative to the first and second dynamic light scattering assemblies.

37. 37. The apparatus of claim 36, wherein the first dynamic light scattering assembly emits light into the first mixing outlet.

38. 38. The apparatus of claim 36 or 37, wherein the second dynamic light scattering assembly emits light into the second mixing outlet.

39. 38. The apparatus of claim 36 or 37, wherein the process chip further comprises a manifold, the manifold directing fluid from the first and second mixing outlets to a shared outlet channel.

40. the process chip further includes a fluid chamber positioned between the first outer surface and the second outer surface, the fluid chamber receiving a selected one of the first fluid mixture and the second fluid mixture from the shared outlet channel; The apparatus, 40. The apparatus of claim 39, further comprising a third dynamic light scattering assembly, the third dynamic light scattering assembly emitting light into the fluid chamber and receiving light scattered from particles in the first fluid mixture or the second fluid mixture in the fluid chamber.

41. 41. The apparatus of claim 40, further comprising a processor, wherein the processor correlates data from the first and second dynamic light scattering assemblies with data from the third dynamic light scattering assembly.

42. 40. The apparatus of claim 39, wherein the process chip further comprises one or more valves for selectively metering fluid flow from the first and second mixed outlets to the shared outlet channel.

43. 38. The apparatus of claim 36 or 37, further comprising a plurality of pressure sensors, said plurality of pressure sensors sensing pressures of said first and second fluid components entering said first and second mixing stages.

44. 44. The apparatus of claim 43, further comprising a processor, wherein the processor receives data from the first dynamic light scattering assembly, the second dynamic light scattering assembly, and the plurality of pressure sensors.

45. 45. The apparatus of claim 44, wherein the processor further correlates the data from the first and second dynamic light scattering assemblies with the data from the plurality of pressure sensors.

46. 1. A method comprising: communicating a fluid through the process tip to produce particles encapsulated in the fluid; emitting light through a first optical fiber toward the encapsulated particles, the encapsulated particles scattering the emitted light, the emitted light being transmitted through an optically transparent material on a first side of the process chip; receiving the light scattered from the encapsulated particles, the received light being transmitted through the light-transmitting material on the first side of the process chip, the received light being received by a second optical fiber oriented obliquely relative to the first optical fiber, the first and second optical fibers being affixed to a body positioned near the process chip; performing an autocorrelation on the received light; determining either a size of the encapsulated particles using at least the autocorrelation, a size distribution of the encapsulated particles using at least the autocorrelation, or a size and size distribution of the encapsulated particles using at least the autocorrelation.

47. 47. The method of claim 46, wherein the encapsulated particle comprises an encapsulated nucleotide.

48. 48. The method of claim 47, wherein the encapsulated nucleotide comprises an encapsulated mRNA.

49. 49. The method of claim 48, wherein the encapsulated mRNA comprises mRNA encapsulated by at least one delivery vehicle molecule.

50. 50. The method of claim 49, wherein the at least one delivery vehicle molecule comprises an amino-lipidated peptoid.

51. 51. The method of any one of claims 46-50, wherein communicating a fluid through the process chip to produce particles encapsulated in a fluid comprises communicating two or more fluid components through a mixing assembly to produce the encapsulated particles.

52. 48. The method of claim 46 or 47, further comprising monitoring a pressure of fluid communicated through the process chip.

53. 51. The method of claim 50, further comprising correlating the monitored pressure value with one or both of the determined encapsulated particle size value or the determined encapsulated particle size distribution value.

54. determining that the monitored pressure value is outside an acceptable range; 53. The method of claim 52, further comprising: in response to determining that a monitored pressure value is outside an acceptable range, ceasing fluid communication through at least a portion of the process chip.

55. determining that the determined encapsulated particle size or size distribution is outside an acceptable range; and 48. The method of claim 46 or 47, further comprising: in response to determining that the determined encapsulated particle size or size distribution is outside of an acceptable range, ceasing fluid communication through at least a portion of the process chip.

56. 48. The method of claim 46 or 47, wherein the emitted light is emitted along a first axis and the received light is received along a second axis, the first and second axes intersecting at a convergence point, the convergence point being positioned within the process chip.

57. 57. The method of claim 56, wherein the first and second axes together define an oblique angle.

58. 58. The method of claim 57, wherein the oblique angle is within a range of about 10 degrees to about 45 degrees.

59. 1. A method comprising: communicating a fluid through a mixing assembly of the process chip to generate a mixture including particles encapsulated in the fluid; monitoring a pressure of a fluid communicated through the mixing assembly; determining a size or size distribution of the encapsulated particles in the fluid by operating a dynamic light scattering assembly, the dynamic light scattering assembly scattering light from the particles while the fluid is within the process chip; and correlating the monitored fluid pressure with the determined particle size or size distribution.

60. 60. The method of claim 59, further comprising regulating the communication of fluid through the mixing assembly using at least the monitored pressure.

61. 61. The method of claim 59 or 60, further comprising determining that the monitored pressure is outside a predetermined range, and wherein the actuating of the dynamic light scattering assembly is performed in response to determining that the monitored pressure is outside a predetermined range.

62. activating the dynamic light scattering assembly emitting light through a first optical fiber toward the encapsulated particles, the encapsulated particles scattering the emitted light, the emitted light being transmitted through an optically transparent material on a first side of the process chip; receiving the light scattered from the encapsulated particles, the received light being transmitted through the light-transmitting material on the first side of the process chip, the received light being received by a second optical fiber oriented obliquely relative to the first optical fiber, the first and second optical fibers being affixed to a body positioned near the process chip; performing an autocorrelation on the received light; and determining a size or size distribution of the encapsulated particles using at least the autocorrelation.

63. 1. A method comprising: communicating a fluid through a first mixing assembly of the process chip to produce a first mixture including particles encapsulated in the fluid; communicating a fluid through a second mixing assembly of the process chip to produce a second mixture including particles encapsulated in the fluid; emitting light toward the encapsulated particles in the first mixture, the particles in the first mixture scattering the emitted light; receiving the light scattered from the encapsulated particles in the first mixture; performing an autocorrelation on the received light scattered from the encapsulated particles in the first mixture; determining a size or size distribution of the encapsulated particles in the first mixture using at least the autocorrelation for the received light scattered from the encapsulated particles in the first mixture; emitting light toward the encapsulated particles in the second mixture, the particles in the second mixture scattering the emitted light; receiving the light scattered from the encapsulated particles in the second mixture; and performing an autocorrelation on the received light scattered from the encapsulated particles in the second mixture; and determining a size or size distribution of the encapsulated particles in the second mixture using at least the autocorrelation for the received light scattered from the encapsulated particles in the second mixture.

64. 64. The method of claim 63, wherein emitting the light toward the encapsulated particles in the first mixture, receiving the light scattered from the encapsulated particles in the first mixture, emitting light toward the encapsulated particles in the second mixture, and receiving the light scattered from the encapsulated particles in the second mixture are performed by a single dynamic light scattering assembly.

65. selectively communicating the first mixture to a fluid chamber of the single dynamic light scattering assembly, wherein emitting the light toward the encapsulated particles in the first mixture and receiving the light scattered from the encapsulated particles in the first mixture are performed while the first mixture is in the fluid chamber; 65. The method of claim 64, further comprising selectively communicating the second mixture with the fluid chamber, wherein emitting the light toward the encapsulated particles in the second mixture and receiving the light scattered from the encapsulated particles in the second mixture are performed while the second mixture is in the fluid chamber.

66. activating a first dynamic light scattering assembly to emit the light toward the encapsulated particles in the first mixture and to receive the light scattered from the encapsulated particles in the first mixture; activating a second dynamic light scattering assembly to emit the light toward the encapsulated particles in the second mixture and to receive the light scattered from the encapsulated particles in the second mixture, wherein the second dynamic light scattering assembly is separate from the first dynamic light scattering assembly; 65. The method of claim 63 or 64, further comprising:

67. selectively communicating the first mixture with a fluid chamber of a third dynamic light scattering assembly; emitting light toward the encapsulated particles in the first mixture while the first mixture is in the fluid chamber; receiving the light from the encapsulated scattering particles in the first mixture while the first mixture is in the fluid chamber; selectively communicating the second mixture with the fluid chamber; emitting light toward the encapsulated particles in the second mixture while the second mixture is in the fluid chamber; 67. The method of claim 66, further comprising receiving the light scattered from the encapsulated particles in the second mixture while the second mixture is in the fluid chamber.

68. 68. The method of claim 67, further comprising communicating the first and second mixtures through a manifold, the first and second mixtures passing through the manifold before reaching the fluid chamber.

69. An apparatus comprising: a body including a first port and a second port, the body being positionable proximate to a first outer surface of the process chip; a first optical fiber coupled to the first port of the body, the first optical fiber emitting light, the first port directing the light emitted by the first optical fiber through an optically transparent material of the process chip and into a fluid chamber of the process chip; a focusing lens supported by the body, the focusing lens positioned and configured to focus light emitted by the first optical fiber; and a second optical fiber coupled to the second port of the body, the second optical fiber at the second port being oriented at an angle relative to the first optical fiber at the first port, the second optical fiber receiving light scattered by particles in fluid in the fluid chamber in response to the first optical fiber emitting light into the fluid chamber; an optical filter supported by the body, the optical filter positioned and configured to filter the light scattered by particles in fluid in the fluid chamber.

70. The apparatus further includes a process tip removably positioned relative to the body, the process tip comprising: A first outer surface; A second outer surface; and a fluid chamber positioned between the first outer surface and the second outer surface, the fluid chamber including a fluid chamber inlet and a fluid chamber outlet; 70. The apparatus of claim 69, comprising: an optically transparent material positioned between the first exterior surface and the fluid chamber.

71. 71. The apparatus of claim 69 or 70, further comprising a base having a process tip mount, the process tip mount removably receiving the process tip, and the body being positioned adjacent to the process tip mount.

72. 71. The apparatus of claim 69 or 70, wherein the body orients the first optical fiber along an axis perpendicular to the outer surface of the process tip.

73. 71. The apparatus of claim 69 or 70, wherein the body orients the second optical fiber along an axis oriented obliquely relative to the outer surface of the process tip.

74. An apparatus comprising: a process tip mounting fixture that removably receives a process tip; a body including a first port and a second port, the body being fixedly secured to the process tip mount, the process tip mount removably receiving the process tip between the body and the process tip mount; a first optical fiber coupled to the first port of the body, the first optical fiber emitting light, the first port directing the light emitted by the first optical fiber through a light-transmissive material of a process chip received by the process tip mount and into a fluid chamber of the process tip; and a second optical fiber coupled to the second port of the body, the second optical fiber at the second port being oriented at an angle relative to the first optical fiber at the first port, the second optical fiber receiving light scattered by particles in the fluid in the fluid chamber in response to the first optical fiber emitting light into the fluid chamber.

75. The process tip further comprises a process tip removably received in the process tip mounting fixture, the process tip comprising: A first outer surface; A second outer surface; and a fluid chamber positioned between the first outer surface and the second outer surface, the fluid chamber including a fluid chamber inlet and a fluid chamber outlet; an optically transparent material positioned between the first exterior surface and the fluid chamber; 75. The apparatus of claim 74.

76. 76. The apparatus of claim 75, wherein the process tip is configured to form a therapeutic composition.

77. 77. The device of claim 76, wherein the therapeutic composition comprises a fluid containing particles.

78. 78. The apparatus of claim 77, wherein the first port directs the light emitted by the first optical fiber through the optically transparent material of the process chip to reach the fluid of the therapeutic composition.

79. 79. The device of claim 78, wherein the second optical fiber receives light scattered by the particles of the therapeutic composition.

80. 80. The apparatus of claim 79, further comprising a processor that determines one or both of: a size of particles in the therapeutic composition using at least the light scattered by the particles of the therapeutic composition; or a size distribution of particles in the therapeutic composition using at least the light scattered by the particles of the therapeutic composition.

81. An apparatus comprising: A process chip, the process chip comprising: a fluid chamber including a fluid chamber inlet and a fluid chamber outlet; an optically transparent material adjacent to the fluid chamber; a dynamic light scattering assembly, the process chip being removably positioned relative to the dynamic light scattering assembly, the dynamic light scattering assembly directing light through the optically transparent material into the fluid chamber, the dynamic light scattering assembly further receiving light scattered by particles in a fluid within the fluid chamber in response to a first optical fiber emitting light into the fluid chamber, thereby capturing light scattering data; and a processor for determining a viscosity of fluid in the fluid chamber based on the captured light scattering data, and further determining one or both of a size or size distribution of particles in the fluid based on the captured light scattering data.

82. The process chip comprises: a first channel, the fluid chamber inlet configured to receive a first fluid from the first channel; 82. The apparatus of claim 81, further comprising a second channel, the fluid chamber inlet further configured to receive a second fluid from the second channel.

83. 83. The device of claim 82, wherein the first fluid comprises a therapeutic composition.

84. 84. The device of claim 83, wherein the therapeutic composition comprises at least a portion of the particles.

85. 85. The device of claim 84, wherein said particles of said therapeutic composition comprise mRNA.

86. 86. Apparatus according to any one of claims 82 to 85, wherein the second fluid comprises at least a portion of the particles.

87. 87. The apparatus of claim 86, wherein the particles of the second fluid comprise beads.

88. 88. The apparatus of claim 87, wherein the first fluid comprises a therapeutic composition comprising particles.

89. 90. The device of claim 88, wherein the particles of the therapeutic composition have a first diameter and the beads have a second diameter different from the first diameter.

90. 90. The apparatus of claim 89, wherein the second diameter is greater than the first diameter.

91. 84. The apparatus of claim 82 or 83, wherein the first fluid comprises a first type of particles and the second fluid comprises a second type of particles.

92. 92. The apparatus of claim 91 , wherein the processor determines one or both of a size or a size distribution of the first type of particles in the first fluid based on light scattered by the first and second types of particles.

93. 93. The apparatus of claim 92, wherein the second type of particles has a known size.

94. 84. The apparatus of claim 82 or 83, wherein the second fluid comprises a diluent.

95. 95. The apparatus of claim 94, wherein the process chip is configured to selectively add discrete amounts of the diluent to the first fluid in a sequential manner.

96. 96. The apparatus of claim 95, wherein the process chip includes at least one valve that selectively controls delivery of the diluent to the first fluid.

97. 96. The apparatus of claim 95, wherein the process chip further comprises at least one pump that selectively drives movement of the diluent.

98. The processor, tracking an autocorrelation of the captured light scattering data during a sequence of adding discrete amounts of the diluent to the first fluid; and 95. The apparatus of claim 94, further comprising: determining one or both of a size or a size distribution of particles in the fluid based on the tracked autocorrelation.

99. 95. The apparatus of claim 94, wherein the process chip further comprises a mixing chamber for mixing the diluent with the first fluid.

100. 100. The apparatus of claim 99, wherein the mixing chamber is positioned adjacent to the fluid chamber.

101. 100. The apparatus of claim 99, wherein the process chip further comprises a first pump and a second pump, the first pump and the second pump configured to alternately operate to thereby drive the combination of the diluent and the first fluid back and forth through the mixing chamber.

102. 1. A method comprising: communicating a fluid mixture including particles through a process tip; emitting light towards the fluid mixture via a first optical fiber, wherein the particles in the fluid mixture scatter the emitted light; receiving the light scattered from the particles in the fluid mixture, the received light being received by a second optical fiber oriented obliquely relative to the first optical fiber, the first and second optical fibers being affixed to a body positioned near the process tip; performing an autocorrelation on the received light; determining a viscosity of the fluid mixture using at least the autocorrelation; and determining either a size of the particles in the fluid mixture using at least the autocorrelation, a size distribution of the particles in the fluid mixture using at least the autocorrelation, or a size and size distribution of the particles in the fluid mixture using at least the autocorrelation.

103. Communicating fluid through the process chip includes: communicating a first fluid component comprising at least a portion of the particles; communicating a second fluid component; and mixing the first and second fluid components together to form the fluid mixture.

104. 104. The method of claim 103, wherein the particles of the first fluid component comprise therapeutic particles.

105. 105. The method of claim 104, wherein the therapeutic particle comprises mRNA.

106. The method of claim 105, wherein the mRNA is encapsulated in a delivery vehicle.

107. A method according to any one of claims 103 to 106, wherein the second fluid component comprises at least a portion of the particles.

108. 108. The method of claim 107, wherein the particles of the second fluid component comprise beads.

109. 108. The method of claim 107, wherein the particles of the first fluid component have a first diameter and the particles of the second fluid component have a second diameter different from the first diameter.

110. 110. The method of claim 109, wherein the second diameter is greater than the first diameter.

111. 108. The method of claim 107, wherein the particles of the first fluid component comprise a first type of particles and the particles of the second fluid component comprise a second type of particles different from the first type of particles.

112. Receiving the light scattered from the particles in the fluid mixture; receiving light scattered by particles of the first fluid component; and receiving light scattered by particles of the second fluid component.

113. 113. The method of claim 112, wherein determining either the size of the particles in the fluid mixture using at least the autocorrelation, the size distribution of the particles in the fluid mixture using at least the autocorrelation, or the size and size distribution of the particles in the fluid mixture using at least the autocorrelation comprises determining either the size of the particles of the first fluid component using at least the autocorrelation, the size distribution of the particles of the first fluid component using at least the autocorrelation, or the size and size distribution of the particles of the first fluid component using at least the autocorrelation.

114. 105. The method of claim 103 or 104, wherein the second fluid component comprises a diluent.

115. 115. The method of claim 114, wherein communicating the fluid mixture through the process tip further comprises sequentially adding discrete amounts of the diluent to the first fluid component.

116. 116. The method of claim 115, further comprising repeating the emitting of the light, the receiving of the light, and the performing of the autocorrelation each time a discrete amount of the diluent is sequentially added to the first fluid component.

117. 117. The method of claim 116, further comprising tracking the autocorrelation through each iteration of emitting the light, receiving the light, and performing the autocorrelation each time a discrete amount of the diluent is sequentially added to the first fluid component.

118. 118. The method of claim 117, wherein determining the viscosity of the fluid mixture using at least the autocorrelation comprises determining the viscosity of the fluid mixture using the tracked autocorrelation.

119. 118. The method of claim 117, wherein determining either the size of the particles in the fluid mixture using at least the autocorrelation, the size distribution of the particles in the fluid mixture using at least the autocorrelation, or the size and size distribution of the particles in the fluid mixture using at least the autocorrelation comprises determining either the size of the particles in the fluid mixture using the tracked autocorrelation, the size distribution of the particles in the fluid mixture using the tracked autocorrelation, or the size and size distribution of the particles in the fluid mixture using the tracked autocorrelation.

120. 116. The method of claim 115, wherein the discrete amounts of diluent added to the first fluid component are the same amount of diluent each time the discrete amounts of diluent are sequentially added to the first fluid component.

121. 105. The method of claim 103 or 104, wherein mixing the first and second fluid components together to form the fluid mixture comprises alternatingly operating at least two pumps to drive the first and second fluid components back and forth through a mixing chamber of the process chip.

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