Target determination
Patent Information
- Application Number
- JP2023568261
- Authority / Receiving Office
- JP · JP
- Patent Type
- Applications
- Current Assignee / Owner
- Priority Date
- 2021-05-07
- Filing Date
- 2022-05-05
- Publication Date
- 2025-05-14
AI Technical Summary
Existing assays for measuring targets in liquid samples are prone to inaccuracies due to factors such as sample concentration, type, and pre-measurement processing steps, particularly leading to target dissociation during dilution and difficulty in detecting high or low concentration targets simultaneously.
The techniques involve measuring targets in undiluted or minimally diluted samples using immunoassay devices that stabilize target:therapeutic interactions, allowing rapid and accurate detection of multiple targets without significant pre-processing, including the use of test strips with capture and detection agents.
This approach enables efficient, sensitive, specific, reliable, and rapid measurement of targets, overcoming limitations of previous assays by allowing simultaneous detection of high and low abundance targets with minimal pre-processing, improving diagnostic and therapeutic outcomes.
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Abstract
Description
[Technical field]
[0001] Related Applications This application claims priority to U.S. Provisional Application No. 63 / 185,696, filed May 7, 2021, the contents of which are incorporated herein by reference in their entirety. [Background technology]
[0002] Assaying one or more targets in one or more liquid samples can be prone to imprecision. Some factors can be the concentration of the target, the type or condition of the sample, and / or sample processing steps that need to be performed before measuring the target. There is a need for techniques that provide efficient, sensitive, specific, accurate, reliable, and / or rapid measurement of one or more targets in one or more samples. Summary of the Invention
[0003] The present disclosure provides techniques for measuring one or more targets from one or more liquid samples (e.g., undiluted samples, e.g., minimally diluted samples). As will be appreciated by those skilled in the art, there are several sources of problems associated with measuring one or more targets in one or more liquid samples from a patient.
[0004] For example, the present disclosure provides solutions to the causes of problems in evaluating therapeutic agent / target interactions. In particular, the present disclosure provides insight that such problems may be due to post-collection, pre-measurement sample processing procedures, such as dilution, required in many known assays used to measure one or more targets. The present disclosure also recognizes that the measurement of certain targets and / or therapeutic agents in a sample may be prone to inaccuracies due to dissociation of the target from the therapeutic agent. For example, when diluting a sample to measure a target and / or therapeutic agent, the dilution may result in dissociation of the target and therapeutic agent, resulting in a falsely elevated measurement value compared to before dilution.
[0005] Among other things, the techniques provided herein stabilize target:therapeutic interactions and also provide a means to measure targets efficiently, accurately, sensitively, specifically, and reliably and / or rapidly. For example, in some embodiments, the present disclosure provides techniques that can measure targets in samples using undiluted or minimally diluted samples, which contact the test strip within 6-10 seconds of application and migrate across the entire length of the test strip within 90 seconds. Such techniques provide improvements over previously available assays, including the rapid capture of target:therapeutic complexes prior to substantial dissociation and then accurately measuring the levels of the target in the sample.
[0006] Further, the present disclosure recognizes that when a target is highly concentrated, the inability to dilute the sample creates difficulties in detection. That is, previously, highly concentrated targets could only be measured by diluting the sample, because oversaturation limited the ability of previously available assays to accurately measure such targets. Also encompassed is the recognition that, prior to the techniques of the present disclosure, measurement of multiple targets from a single sample (e.g., without diluting the sample) was difficult. That is, previously available assays were traditionally complicated by factors such as different targets requiring different assay conditions. For example, if one target is a highly concentrated target and another target is a low concentration target, previously available assays could not measure both targets efficiently, accurately, specifically, sensitively, reliably, and / or rapidly. Furthermore, measurement of certain types of targets (e.g., biomarkers, e.g., complement proteins, e.g., complement pathway proteins, etc.) may be impossible, incomplete, and / or inaccurate due to the inability to adequately detect the lower and / or upper limits of the amount in a given sample. In particular, the present disclosure recognizes and provides solutions to the limitations of previously available assays. For example, while the present disclosure improves the dynamic range of detection of various targets, previously available assays were unable to adequately detect the lower and upper limits of a particular target, capture the full range of amounts for a given target, and / or accurately measure a target due to the disruptive processing steps required to perform such assays (e.g., several serial dilutions). In some embodiments, the provided technology allows for the accurate measurement of two or more targets substantially simultaneously. In some such embodiments, such measurements may require one or more of different processing or pre-treatment steps or conditions, assay (e.g., buffer) conditions, processing conditions, and / or dilution(s) in a single assay, which cannot be achieved using previously available assays. Among other things, the present disclosure provides technology that provides solutions to these and other problems.
[0007] As discussed above, the present disclosure provides insight that many assays inaccurately measure one or more targets. For example, previously available assays may erroneously fail to detect the presence of a target or may under- or over-report the concentration of a target. Thus, the present disclosure reveals that prior art assays lack adequate efficiency, specificity, accuracy, sensitivity, reliability, and / or rapidity to measure one or more targets. That is, prior art assays are unable to accurately quantify a target over a suitable wide range of possible concentrations. For example, in some embodiments, a particular target may be present at such low or high levels that the measurement is inaccurate because the target is erroneously not detected or the concentration of a given target is over- or under-reported due to artifacts or limitations inherent in previously available assays, such as dilution and target capture / detection combinations for target measurement. In some embodiments, the present disclosure provides technology that allows for the first time accurate measurement of one or more targets that have upper or lower limits of quantification that are outside the detection range of currently current assays, including embodiments directed to multiplexed assays. In some embodiments, targets are so abundant that currently available methods are unable to capture or report within appropriate upper or lower limits of detection to quantify a given target (e.g., an abundant target) in a sample. In some embodiments, targets are present at such low concentrations that adequate detection (e.g., accuracy, high sensitivity, and specificity) and / or quantification is not possible prior to the techniques provided by the present disclosure.
[0008] In addition to achieving an unprecedented combination of efficiency, high sensitivity, specificity, accuracy, reliability, and / or rapidity, the disclosed technology also provides a platform that can be used in point-of-care applications, reducing handling, the number of personnel required, and the time it takes for an assay result. Importantly, such features provide a platform that allows clinicians and providers to quickly and easily detect and monitor patients for one or more targets, and improve patient care by preventing and / or treating one or more conditions that, prior to the disclosed technology, could have dire consequences due to the inaccuracy or inability to detect underlying and continuing changes in one or more targets. The disclosed technology provides insights and new technologies, including assay methods that, for the first time, allow for efficient, specific, sensitive, accurate, reliable, and / or rapid measurement of one or more targets. Such technologies would enable safer and more effective development and monitoring of therapeutics, as well as safer and more effective treatment of patients.
[0009] In some aspects, the present disclosure provides a method of measuring a target, the method including: (i) obtaining a sample; (ii) contacting an immunoassay device with at least a portion of the sample; and (iii) measuring one or more targets in the sample.
[0010] In some aspects, the disclosure provides methods of measuring at least one target in a sample that include improvements (e.g., compared to previously available assays), the improvements including measuring a target in the sample by contacting an immunoassay device with the sample, where the sample has not been subjected to offline dilution prior to contacting, and measuring one or more targets, where the measurement is more efficient, accurate, sensitive, specific, reliable, and / or rapid compared to measurements performed on diluted samples. In some such embodiments, the at least one measurement is more efficient, accurate, sensitive, specific, reliable, and / or rapid than methods that include one or more offline sample dilution steps prior to contacting the immunoassay device.
[0011] In some embodiments, the immunoassay device includes at least one test strip.
[0012] In some embodiments, the immunoassay device contacts a portion of the sample within 30 minutes of the sample being obtained.
[0013] In some embodiments, the sample is not subjected to offline dilution prior to contacting the immunoassay device.
[0014] In some embodiments, prior to contacting the immunoassay device, the sample is subjected to a pretreatment step that includes at least one dilution.
[0015] In some embodiments, the sample is or comprises a fluid. In some embodiments, the sample is not solid or is not substantially composed of solid materials. In some embodiments, the sample is or comprises whole blood, plasma, serum, aqueous humor, tears, ocular fluid, urine and / or cerebrospinal fluid. In some embodiments, the sample is a crude sample. In some such embodiments, the crude sample is not diluted prior to contacting the immunoassay device.
[0016] In some embodiments, the sample undergoes one or more purification steps prior to contacting the immunoassay device.
[0017] In some embodiments, the immunoassay device of the present disclosure includes at least one of a sample pad and a conjugate pad.
[0018] In some embodiments, the immunoassay device includes at least two, three, four, five, six, seven, eight or more test strips. In some such embodiments, the at least two, three, or four test strips each include at least two, three, four, five, six, or more test lines.
[0019] In some embodiments, the test line comprises at least one capture agent, hi some such embodiments, the capture agent is or comprises an antibody.
[0020] In some embodiments, measuring one or more targets of the present disclosure is performed approximately 30-300 minutes after the sample is obtained, in some embodiments, measuring is performed within 30 minutes of the sample being obtained.
[0021] In some aspects, the disclosure provides methods comprising: (a) measuring targets in a sample, the measuring method comprising: (i) obtaining the sample; (ii) contacting an immunoassay device with at least a portion of the sample; (iii) allowing the sample and the immunoassay device to stand together for a period of time; and (iv) measuring at least one target in the sample; (b) comparing the measurements of the one or more targets to at least one reference measurement; and (c) optionally modifying or administering one or more therapies to the subject from whom the sample was obtained.
[0022] In some embodiments, the immunoassay device includes at least one test strip. In some such embodiments, the test strip includes at least one test line that includes beads. In some embodiments, the immunoassay device includes at least one conjugate pad. In some embodiments, the test strip includes at least one conjugate pad that includes beads. In some embodiments, the beads include nanobeads (e.g., polycitren beads, colloidal beads, etc.). In some embodiments, the nanobeads have a diameter of 100-500 nm. In some embodiments, the nanobeads have a diameter of 200-400 nm.
[0023] In some embodiments, the nanobead comprises at least one detection agent. In some embodiments, the detection agent is an antibody (e.g., a labeled antibody). In some embodiments, the detection agent is a protein or peptide (e.g., for competitive immunoassays). In some embodiments, the detection agent is or comprises a low molecular weight fluorophore.
[0024] In some embodiments, the immunoassay device includes at least one competitor and / or at least one capture agent.
[0025] In some embodiments, the competitor is or comprises an antibody.
[0026] In some embodiments, the capture agent is or comprises an antibody.
[0027] In some embodiments, the immunoassay device includes at least one of a conjugate pad and a sample pad.
[0028] In some embodiments, the conjugate pad comprises at least one competitor and / or at least one detection agent. In some such embodiments, the competitor binds to at least one target in the sample. In some such embodiments, the detection agent binds to at least one target in the sample.
[0029] In some embodiments, the competitor binds to an excess of at least one target in the sample.
[0030] In some embodiments, measuring the target is performed using a reader system capable of measuring multiple test lines in multiple visible channels.
[0031] In some aspects, the disclosure provides methods that include: (a) measuring the amount of a target in a sample by steps that include: (i) obtaining a sample, where the sample is diluted in a container; (ii) allowing the container with the diluted sample to stand for a first period of time; (iii) contacting an immunoassay device with the diluted sample; (iv) allowing the immunoassay device with the diluted sample to stand for a second period of time; and (v) measuring at least one target in the sample; and (b) optionally modifying or administering one or more therapies to the subject from whom the sample was obtained.
[0032] In some embodiments, the first period of time is 5 minutes or less.In some embodiments, the second period of time is 5 minutes or less.
[0033] In some embodiments, the sample is diluted with a substrate to which at least one target in the sample can react.
[0034] In some embodiments, the present disclosure provides a kit comprising: (i) a test cassette including an immunoassay device, the immunoassay device including at least one test strip including at least one test line; (ii) at least one detection agent; and, optionally, (iii) at least one capture agent.
[0035] In some embodiments, the present disclosure provides a test cassette, comprising: A test cassette is provided that includes: (i) an immunoassay device, the immunoassay device itself including at least one test strip; and (ii) at least two test lines.
[0036] In some embodiments, the disclosure provides a method of diagnosing a subject as having or being susceptible to at least one disease, disorder, or condition, comprising: (i) obtaining a sample from the subject; (ii) measuring one or more targets in the sample; (iii) comparing the measurements of the one or more targets to a measurement range of one or more reference samples; and (iv) diagnosing the patient as having or at risk for developing the disease, disorder, or condition if the measurements of the one or more targets are outside the measurement range of the one or more reference samples.
[0037] In some embodiments, the present disclosure provides a reader system including: (a) a means for measuring one or more targets in a sample, the means including: (i) inserting a test cassette into the reader system such that a direction of sample flow on an immunoassay device of the test cassette is oriented parallel to gravity; and (ii) measuring at least one target on at least one test line on at least one test strip in the immunoassay device. In some such embodiments, the measuring includes measuring at least four test lines on at least one test strip of the immunoassay device.
[0038] In some embodiments, the test cassette is inserted through a port in the reader system. In some such embodiments, the sample is added to the immunoassay device prior to inserting the test cassette into the reader system. In some embodiments, the sample is added to the immunoassay device after inserting the test cassette into the reader system. In some embodiments, the measuring includes measuring at least four test lines on at least one test strip of the immunoassay device.
[0039] In some embodiments, targets of the present disclosure are one or more of C3, C3a, iC3b, C4, C5, sC5b-9, IL-6, ADAMTS13, MASP2:AT complex, C4d, Ba, Bb, FH, CXCL9, sCD25, microRNA, IL8, pentraxin 3, IL1, VCAM1, thrombomodulin, ferritin, CRP, IL-10, TNFα, IFNγ, and / or creatinine. In some embodiments, the test line comprises at least one capture agent for one or more of C3, C3a, iC3b, C4, C5, sC5b-9, IL-6, ADAMTS13, MASP2:AT complex, C4d, Ba, Bb, FH, CXCL9, sCD25, microRNA, IL8, pentraxin 3, IL1, VCAM1, thrombomodulin, ferritin, CRP, IL-10, TNFα, IFNγ, and / or creatinine.
[0040] In some embodiments of the present disclosure, the subject is suspected of having or is at risk of having one or more of age-related macular degeneration (AMD), complement 3 glomerulopathy (C3G), hematopoietic stem cell transplant-associated thrombotic microangiopathy (HSCT-TMA), complement-mediated thrombotic microangiopathy (CM-TMA), atypical hemolytic uraemic syndrome (aHUS), thrombotic thrombocytopenic purpura (TTP), COVID19, lupus erythematosus, lupus nephritis, cytokine release syndrome, Alzheimer's disease (AD), or a combination thereof.
[0041] In some embodiments, the subject of the present disclosure is at risk of developing or diagnosed as having one or more of age-related macular degeneration (AMD), complement 3 glomerulopathy (C3G), hematopoietic stem cell transplant-associated thrombotic microangiopathy (HSCT-TMA), complement-mediated thrombotic microangiopathy (CM-TMA), atypical hemolytic uraemic syndrome (aHUS), thrombotic thrombocytopenic purpura (TTP), COVID19, lupus erythematosus, lupus nephritis, cytokine release syndrome, Alzheimer's disease (AD), or a combination thereof. [Brief description of the drawings]
[0042] [Figure 1] 1 provides a schematic diagram of the complement system.
[0043] [Figure 2A] 1 illustrates an exemplary test cassette configuration and certain components of an exemplary embodiment disclosed herein.
[0044] [Figure 2B] 1 shows an exemplary experiment used in developing an exemplary immunoassay device including multiple test strips having multiple test lines to provide improved measurements of one or more targets.
[0045] [Diagram 3] 1A-1D show top and side views of the components of an exemplary test cassette configuration of the present disclosure.
[0046] [Figure 4] 1 illustrates an exemplary test strip configuration in an immunoassay device for use with the test cassette of the present disclosure.
[0047] [Diagram 5] 1 illustrates an exemplary test strip configuration in an immunoassay device for use with the test cassette of the present disclosure.
[0048] [Figure 6] Two different assays are presented, each using beads of different materials and sizes, to quantify a target.
[0049] [Figure 7A] 1 shows an exemplary high abundance target in a sample and the results used to identify the source of a problem in measuring the high abundance target in the presence of a therapeutic agent. [Figure 7B] We present a solution developed and disclosed herein to overcome the inaccuracies in measuring high abundance targets. [Figure 7C] 1 shows accurate measurement of free versus therapeutic bound target using the methods developed herein.
[0050] [Figure 8] 13 shows the results of using a multi-line approach for quantification of high concentrations of an exemplary target in a sample.
[0051] [Figure 9] 4 shows results from an assay using the prozone reduction method.
[0052] [Figure 10] 4 shows results from an assay using the prozone reduction method.
[0053] [Figure 11] 1 shows a comparison of cassette results from assays using test strips containing different pore sizes to eliminate filtration effects.
[0054] [Figure 12] 1 shows results from an assay measuring high concentrations of an exemplary target.
[0055] [Figure 13] 1 shows a comparison of results measuring an exemplary target using the techniques of the present disclosure compared to those from a standard ELISA.
[0056] [Figure 14] 1 shows test line peaks on two different test lines at various concentrations of an exemplary target.
[0057] [Figure 15] 1 shows the results of an exemplary low concentration target from banked samples of patients with autoimmune disease.
[0058] [Figure 16A] 13 shows the results of measuring the capture and detection specificity of an exemplary target at various concentrations using the techniques of the present disclosure. [Figure 16B] 13 shows the results of measuring the capture and detection specificity of an exemplary target at various concentrations using the techniques of the present disclosure.
[0059] [Figure 17] 1 shows exemplary results comparing classical complement pathway activation from stimulated and unstimulated plasma samples at various time points using the techniques of the present disclosure.
[0060] [Figure 18] 1 shows urinary sC5b-9 levels from patients between visits where high vs. low renal scores were recorded. DETAILED DESCRIPTION OF THE PREFERRED EMBODIMENTS
[0061] definition Administration: As used herein, "administration" refers to the administration of a treatment to a subject or a system. In some embodiments, administration may be of a composition to a subject or a system. In some embodiments, administration to an animal subject (e.g., a human) may be by any suitable route. For example, in some embodiments, administration (e.g., of a composition) may be bronchial (including by bronchial instillation), oral, intestinal, intercutaneous, intraarterial, intradermal, intragastric, intramedullary, intramuscular, intranasal, intraperitoneal, intrathecal, intravenous, intraventricular, specific organ (e.g., intrahepatic), mucosal, nasal, oral, rectal, subcutaneous, sublingual, topical, tracheal (including by intratracheal instillation), transdermal, vaginal, and vitreous. In some embodiments, administration may involve intermittent administration. In some embodiments, administration may involve continuous administration (e.g., perfusion) for at least a selected period of time.
[0062] Agent: As used herein, "agent" may refer to any chemical class of compound or entity, including, for example, polypeptides, nucleic acids, sugars, lipids, small molecules, metals, or combinations thereof. As will be clear from the context, in some embodiments, an agent may be or include a cell or organism, or a fraction, extract, or component thereof. In some embodiments, an agent is or includes a natural product found in nature and / or obtained from nature. In some embodiments, an agent is or includes one or more entities that are artificial in that they are designed, engineered, and / or produced by the manual act of man, and / or are not found in nature. In some embodiments, an agent may be utilized in an isolated or pure form, and in some embodiments, an agent may be utilized in a crude form. In some embodiments, potential agents are provided as collections or libraries that can be screened, for example, to identify or characterize active agents therein. Some specific embodiments of agents that may be utilized according to the present disclosure include small molecules, antibodies, antibody fragments, complement receptors or binding proteins, enzymes, aptamers, nucleic acids (e.g., siRNA, shRNA, DNA / RNA hybrids, antisense oligonucleotides, ribozymes), peptides, peptidomimetics, and the like. In some embodiments, the agent is a polymer or includes a polymer. In some embodiments, the agent is not a polymer and / or is substantially free of any polymer. In some embodiments, the agent contains at least one polymer moiety. In some embodiments, the agent lacks any polymer moiety or is substantially free of any polymer moiety. In some embodiments, the agent is used to detect (e.g., through a visualization technique) and / or report the presence or absence of one or more targets in a sample (e.g., a detection agent). In some embodiments, the agent is used, for example, to compete with another agent and / or to bind one or more targets in a sample (e.g., a competitor, e.g., a capture agent). In some embodiments, the difference between a competitor and a capture agent is the location on the test cassette.For example, in some embodiments, the competitor is first localized to the conjugate pad, and when the sample contacts, the competitor binds to the target in the sample. In some such embodiments, the competitor:target complex is not necessarily retained in the conjugate pad, but can pass through the membrane of the immunoassay device. In some embodiments, the capture agent is localized to the test line, and when the sample contacts the test line, the target is immobilized to the test line with the capture agent. In some such embodiments, the "captured" target associates with a detection agent (e.g., forms a complex), which can be visualized on the test line of the immunoassay device. In some embodiments, the difference between the detection agent and the competitor is the presence of a moiety that is detectable by a reader system or otherwise observable by interrogating the test strip. That is, in some embodiments, the competitor can become a detection agent by the addition of a detectable moiety. In some embodiments, the detection agent is also a competitor. In some embodiments, the competitor is not a detection agent. In some embodiments, the competitor and capture agent may be the same agent, but the competitor is localized to the conjugate pad and the capture agent is localized to the test line of the immunoassay device of the present disclosure. As described herein, in some embodiments, the competitor, capture, and / or detection agent is target specific.
[0063] Approximately: As used herein, "approximately" or "about" refers to a value similar to a stated reference value when applied to one or more values of interest. In certain embodiments, the term "approximately" or "about" refers to a range of values that is within 25%, 20%, 19%, 18%, 17%, 16%, 15%, 14%, 13%, 12%, 11%, 10%, 9%, 8%, 7%, 6%, 5%, 4%, 3%, 2%, 1% in either direction (above or below) of the stated reference value, unless otherwise stated or a different meaning is evident from the context (except when such number exceeds 100% of the possible values).
[0064] Associated: As used herein, two events or entities are "associated" with each other if the presence, level, and / or form of one correlates with the presence, level, and / or form of the other. For example, a particular entity (e.g., a polypeptide, a gene signature, a metabolite, etc.) is considered to be associated with a particular disease, disorder, or condition if its presence, level, and / or form correlates with the incidence and / or susceptibility (e.g., in a relevant population) of the disease, disorder, or condition. In some embodiments, two or more entities are physically "associated" with each other if they interact directly or indirectly to be in physical proximity and / or remain in close proximity with each other. In some embodiments, two or more entities that are physically associated with each other are covalently linked to each other. In some embodiments, two or more entities that are physically associated with each other are not covalently linked to each other, but are non-covalently associated, for example, by hydrogen bonds, van der Waals interactions, hydrophobic interactions, magnetism, and combinations thereof.
[0065] Biomarker: As used herein, "biomarker" refers to an entity that is associated with the presence (or absence), level, or morphology, correlation, or association of a particular biological event or condition of interest, consistent with its use in the art, to be considered a "marker" of that event or condition. In some embodiments, a biomarker may be or include a marker for a particular disease state, or the likelihood that a particular disease, disorder, or condition may develop (e.g., cytokine release syndrome, lupus erythematosus, aHUS, etc.), to name a few examples. In some embodiments, a biomarker may be or include a marker for a particular disease or treatment outcome, or the likelihood thereof. Thus, in some embodiments, a biomarker has predictive capabilities, in some embodiments, a biomarker has prognostic capabilities, and in some embodiments, a biomarker has diagnostic capabilities, of the associated biological event or condition of interest. A biomarker may be any chemical class of entity. For example, in some embodiments, a biomarker may be or include a nucleic acid, a polypeptide, a lipid, a carbohydrate, a small molecule, an inorganic agent (e.g., a metal or ion), a metabolite, or a combination thereof. In some embodiments, the biomarker is a cell surface marker. In some embodiments, the biomarker is intracellular. In some embodiments, the biomarker is found outside of the cell (e.g., secreted or otherwise produced or present outside of the cell in a bodily fluid, such as, for example, blood, urine, tears, saliva, cerebrospinal fluid, exhaled breath condensate, etc.). In some embodiments, the biomarker is measured using a fluid sample from the subject. For example, in some embodiments, the biomarker is measured in a sample comprising one or more of blood, plasma, urine, tears, saliva, cerebrospinal fluid, etc. In some embodiments, one or more biomarkers are measured and the results are compiled into a panel and interpreted, e.g., to determine the likelihood that a disease, disorder, or condition exists or is likely to exist or develop.In some embodiments, the target may be or may include a biomarker. In some embodiments, the biomarker may be or may include a target.
[0066] Combination therapy: As used herein, "combination therapy" refers to a situation in which a subject is exposed to two or more therapeutic regimens (e.g., two or more therapeutic agents) simultaneously. In some embodiments, the two or more agents may be administered simultaneously, in some embodiments, such agents may be administered sequentially, and in some embodiments, such agents are administered in an overlapping dosing regimen.
[0067] Comparable: As used herein, "comparable" refers to two or more agents, entities, situations, sets of conditions, etc. that may not be identical to each other, but are similar enough to allow a comparison between them so that conclusions can be reasonably drawn based on observed differences or similarities. In some embodiments, comparable sets of conditions, situations, individuals, or populations are characterized by a number of substantially identical characteristics and one or a few different characteristics. A person skilled in the art will understand what degree of identity is required for two or more such agents, entities, situations, sets of conditions, etc. to be considered comparable in any given situation in the context. For example, a person skilled in the art will understand that a set of situations, individuals, or populations is comparable to each other when it is characterized by a sufficient number and type of substantially identical characteristics to warrant a reasonable conclusion that the differences in the results obtained or observed phenomena under or by the different sets of situations, individuals, or populations are caused by or indicate changes in those characteristics that change.
[0068] Control Line: As used herein, a "control line" is a test line deposited (i.e., striped) on a test strip that serves as an internal quality control. That is, the control line indicates that both the strip and / or the reader system (e.g., an immunoassay reader system) are functioning within acceptable parameters. In some embodiments, a test strip has a control line and one or more additional test lines. In some embodiments, a test strip has only a control line (e.g., a control test cassette, e.g., only one test line). In some embodiments, a control line, in some configurations, includes one or more moieties that can capture or bind one or more controls in a sample (e.g., a sample of interest, e.g., a control sample provided in a kit, etc.).
[0069] Detecting: As used herein, "detecting" refers to the ability to identify the absence, presence, and / or level of a particular entity, such as an agent or target, as described herein. For example, in some embodiments, detecting identifies the presence of a target in a sample, e.g., through the use of one or more signals, e.g., visualizable signals. In some embodiments, detecting may be or may include the absence of one or more signals that indicate the absence of a particular agent or target in a sample. In some embodiments, detecting is qualitative (e.g., identifying the presence or absence). In some embodiments, detecting is quantitative (e.g., identifying a particular amount or concentration of an entity). In some embodiments, the detection agent is specific for a given target.
[0070] Determine or Determining: As used herein, many of the provided methods described herein include a "determining" step. Those of skill in the art reading this disclosure will understand that such "determining" can utilize or be accomplished by using any of a variety of techniques available to those of skill in the art, including, for example, the specific techniques explicitly mentioned herein. In some embodiments, determining involves manipulation of a physical sample. In some embodiments, determining involves consideration and / or manipulation of data or information, for example, using a computer or other processing unit adapted to perform the relevant analysis. In some embodiments, determining involves receiving relevant information and / or materials from a source. In some embodiments, determining involves comparing one or more characteristics of the sample or entity to a comparable reference.
[0071] Dilute or Dilution: As used herein, "diluting" or "dilution" refers to a process of reducing the concentration of one or more components compared to an undiluted sample. In some embodiments, dilution involves adding liquid to achieve the reduction in concentration. In some embodiments, dilution can be an in-line dilution. In some embodiments, dilution can be an offline dilution.
[0072] Dosing regimen: (or "therapeutic regimen"), as used herein, "dosing regimen" refers to a set of unit doses (typically two or more) administered individually to a subject, typically separated by a period of time. In some embodiments, a given therapeutic agent has a recommended dosing regimen, which may involve one or more doses. In some embodiments, a dosing regimen includes multiple doses, each separated from the other by a period of equal length. In some embodiments, a dosing regimen includes multiple doses, and at least two different periods separating the individual doses. In some embodiments, all doses within a dosing regimen are of the same unit dosage amount. In some embodiments, different doses within a dosing regimen are of different amounts. In some embodiments, a dosing regimen includes a first dosing at a first dosage amount, followed by one or more additional doses at a second dosage amount different from the first dosage amount. In some embodiments, a dosing regimen includes a first dose at the amount of the first dose, followed by one or more additional doses at the amount of the second dose equal to the amount of the first dose. In some embodiments, the dosing regimen correlates with a desired or beneficial outcome when administered across a relevant population (ie, is a therapeutic dosing regimen).
[0073] Flare: As used herein, a "flare" refers to a sudden increase in the severity of symptoms of a disease, disorder, or condition sufficient to cause a clinician to initiate or change treatment in a subject. In some embodiments, a flare may be defined as achieving a particular score on one or more disease indices, e.g., the SELENA SLEDAI Flare Index or the Physician Global Assessment (PGA). In some embodiments, a temporary change in disease activity indicates a flare. In some embodiments, a flare may be characterized or defined by, for example, new or increased use of treatments, such as high doses of corticosteroids (e.g., prednisone administered at more than 20 mg / day) or immunosuppressants. For example, in some embodiments, a flare may be characterized or defined by hospitalization or death due to a disease, disorder, or condition. In some embodiments, a flare may be or include a measurable increase in disease activity in one or more organ systems, accompanied by, for example, new or worse clinical signs and symptoms and / or laboratory measurements compared to measurements made previously. In some embodiments, a measurable increase in disease activity is deemed clinically significant by the assessor, typically including at least consideration of a change or increase in therapy, and quite frequently, implementation of a change in therapy. In some embodiments, a flare is characterized by or defined as a change of 1.0 or more in the Physician's Global Assessment of Disease Activity (measured from 0 to 3) scale from the previous visit or a visit within the past 200 days (e.g., past 100 days, e.g., past 93 days, e.g., past 75 days, e.g., past 50 days, e.g., past 25 days, e.g., past 10 days, e.g., past 5 days, e.g., past 1 day). In some embodiments, a flare can be a rapid and acute event, e.g., within minutes (e.g., 10, 20, 30 or more) or within hours (e.g., 1, 2, 3, 4, 5, 6 or more) of an inciting event (e.g., administration of a gene therapy treatment, e.g., administration of a CAR-T therapy, etc.).
[0074] "Improve," "Increase," or "Decrease": As used herein, "improve," "increase," or "decrease," or their grammatical equivalents, refer to a value relative to a baseline measurement, such as a measurement in the same individual prior to the initiation of a treatment described herein, or a measurement in a control individual (or control individuals) in the absence of a treatment described herein. In some embodiments, a "control individual" is an individual suffering from the same form of disease or injury as the individual being treated.
[0075] Immunoassay device: As used herein, an "immunoassay device" is one or more test strips to which a sample is applied, which can then be evaluated, such as for purposes of measuring one or more targets in the sample. In some embodiments, the immunoassay device further comprises at least one additional component. In some such embodiments, the at least one additional component is or comprises a sample pad and / or a conjugate pad. In some embodiments, the immunoassay device is contained within a casing. In some such embodiments, an immunoassay device at least partially contained within a casing may be referred to as a test cassette or test cartridge.
[0076] In-line dilution: As used herein, "in-line dilution" refers to effectively diluting a sample of the present disclosure by applying at least a portion of the sample to an immunoassay device described herein such that at least a portion of the immunoassay device includes a solid phase that alters the sample in some way (e.g., removes certain cell types, captures some of the specific targets, etc.), effectively diluting at least a portion (e.g., a target or cell type) from a given sample in some way.
[0077] In vitro: As used herein, "in vitro" refers to events that take place not within a multicellular organism, but in an artificial environment, e.g., a test tube or reaction vessel, cell culture, and the like.
[0078] In vivo: As used herein, "in vivo" refers to events that occur within multicellular organisms, such as humans and non-human animals. In the context of cell-based systems, the term can be used to refer to events that occur within living cells (as opposed to, for example, in vitro systems).
[0079] Measurement: As used herein, "measurement" refers to a process of determining the amount (e.g., quantitative) and / or the degree of presence or absence (e.g., qualitative) of a target. In some embodiments, the measurement is made using techniques of the present disclosure. In some embodiments, the techniques of the present disclosure are assayed using known instruments or devices to make one or more measurements. In some embodiments, the measurement is quantitative. In some embodiments, the measurement is qualitative. In some embodiments, the measurement includes a qualitative assessment of "absent". In some embodiments, the measurement includes a quantitative assessment of "zero" or below the LLOQ.
[0080] Offline dilution: As used herein, "offline dilution" refers to dilution performed with or on a sample before any portion of the sample is applied to the immunoassay device of the present disclosure. For example, in some embodiments, offline dilution involves collecting a sample and diluting the sample by a set of specific steps and amounts. In some embodiments, the sample is diluted using a buffer. In some embodiments, the sample is diluted during an assay step (e.g., an enzyme assay, e.g., incubation with a substrate, e.g., an ADAMTS13 activity assay, etc.). In some embodiments, a sample of the present disclosure has not been subjected to any offline dilution. In some embodiments, a sample of the present disclosure may be subjected to at least one offline dilution. In some such embodiments, the offline dilution is a "minimal" dilution. In some embodiments, the minimal dilution does not include serial dilutions of a particular sample.
[0081] Prevention: As used herein, "prevention" refers to a delay in the onset and / or a reduction in the frequency and / or severity of one or more symptoms of a particular disease, disorder, or condition. In some embodiments, prevention is evaluated on a population basis such that an agent is considered to "prevent" a particular disease, disorder, or condition if a statistically significant reduction in the occurrence, frequency, and / or intensity of one or more symptoms of the particular disease, disorder, or condition is observed in a population susceptible to the disease, disorder, or condition. In some embodiments, prevention may be said to occur when the onset of a disease, disorder, or condition is delayed for a predetermined period of time. In some embodiments, prevention may be said to occur when the onset of a disease, disorder, or condition stops progressing completely or at a particular rate compared to before prevention occurs. For example, in some embodiments, the techniques of the present disclosure may measure and reveal real-time, sensitive, accurate, reliable, and / or specific measurements of the ability to see changes in one or more targets and providers, allowing, for example, to administer one or more treatments in real time and / or at the point of care. In some such embodiments, such measurements may completely prevent the onset of a disease, disorder, or condition (e.g., cytokine release syndrome, which may occur with certain therapies, such as gene therapy, CAR-T therapy, etc.) In some embodiments, prevention may be said to occur when detection of one or more alterations in one or more targets allows a provider to administer a treatment such that an outcome that would have occurred in the absence of detection is mitigated to some extent or halted entirely, compared to if the treatment had not occurred.
[0082] Pretreatment: As used herein, "pretreatment" describes the process of treating a sample after it has been obtained or collected and prior to measuring one or more targets. In some embodiments, pretreatment involves contacting the sample with a liquid, which may optionally contain at least one agent, such that the sample and agent are mixed. In some such embodiments, such a mixing step results in dilution of the sample and, therefore, of one or more targets.
[0083] Reference: As used herein, "reference" describes a standard or control against which a comparison is made. For example, in some embodiments, an agent, animal, individual, population, sample, sequence, or value of interest is compared to a reference or control agent, animal, individual, population, sample, sequence, or value. In some embodiments, the reference or control is tested and / or determined substantially simultaneously with the test or determination of interest. In some embodiments, the reference or control is a historical reference or control, optionally embodied in a tangible medium. In some such embodiments, the historical reference is a measurement taken from the same subject at a different time. In some embodiments, more than one reference value may be used, i.e., for example, in some embodiments, a reference level from a standardized laboratory reference range and a reference level from a previous measurement of a given target performed on the same subject may each be used to compare the measurement of the target in the subject. In some embodiments, the reference is for a particular amount of starting material compared to the ending material after the process has been performed. For example, in an enzyme assay, a known amount is input into the assay and the measurements may be the percent completion of a particular reaction relative to the starting material and the percent of a hypothetical / theoretical amount relative to the actual amount. In some such embodiments, the reference is a hypothetical / theoretical calculated or modeled quantity. Typically, as will be understood by one of skill in the art, the reference or control is determined or analyzed under conditions or circumstances comparable to those of the subject being evaluated. One of skill in the art will understand when sufficient similarity exists to justify reliance on and / or comparison to a particular possible reference or control.
[0084] Response: As used herein, "response" (e.g., to a treatment) may refer to any beneficial change in a subject's condition that occurs as a result of or correlates with the treatment. Such changes may include stabilization of the condition (e.g., prevention of deterioration that would have occurred in the absence of treatment), improvement of symptoms of the condition, and / or improvement of prospects for cure of the condition. The exact response criteria may be selected in any suitable manner, provided that the groups being compared are evaluated based on the same or equivalent criteria for determining the response rate. Those skilled in the art will be able to select the appropriate criteria.
[0085] Risk: As understood from the context, the "risk" of a disease, disorder, and / or condition includes the likelihood that a particular individual will develop the disease, disorder, and / or condition. In some embodiments, the risk is expressed as a percentage. In some embodiments, the risk is 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 20, 30, 40, 50, 60, 70, 80, 90 up to 100%. In some embodiments, the risk is expressed relative to the risk associated with a reference sample or a group of reference samples. In some embodiments, the reference sample or a group of reference samples has a known risk of the disease, disorder, condition, and / or event. In some embodiments, the reference sample or a group of reference samples is from an individual comparable to the particular individual. In some embodiments, the relative risk is 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, or more. In some embodiments, risk exists but is not quantified by any particular number or risk index, but rather is considered to be present if the measurement of one or more targets differs within or above a particular range for one or more particular targets relative to a reference range.
[0086] Sample: As used herein, a "sample" typically refers to a biological sample obtained or derived in any manner (e.g., including a commercial source) from a source of interest as described herein. In some embodiments, the source of interest includes an organism, such as an animal or a human. In some embodiments, the sample includes one or more targets to be measured by the techniques of the present disclosure. In some embodiments, the sample does not include one or more targets to be measured by the techniques of the present disclosure (e.g., the level of the target is zero or below the LLOQ). In some embodiments, the sample may be or include a control material used for purposes of validating, confirming, and / or calibrating one or more steps of measuring one or more targets using an immunoassay device as described herein.
[0087] Subject: As used herein, a "subject" or "patient" is an animal. In some embodiments, the subject is a mammal. In some embodiments, the mammal is a rat, mouse, cat, dog, pig, non-human primate, etc., or a prenatal form thereof. In some embodiments, the mammal is a human. In some embodiments, the human includes a prenatal human form (e.g., embryo, fetus). In some embodiments, the human is a neonate, infant, toddler, child, adolescent, or adult. In some embodiments, the human is an elderly person. In some embodiments, the subject is afflicted with an associated disease, disorder, or condition. In some embodiments, the subject is susceptible to (at risk of developing) a disease, disorder, or condition. In some embodiments, the subject exhibits one or more symptoms or characteristics of a disease, disorder, or condition. In some embodiments, the subject does not exhibit any symptoms or characteristics of a disease, disorder, or condition. In some embodiments, the subject is one who has one or more characteristics characteristic of susceptibility to or risk for a disease, disorder, or condition. In some embodiments, the subject is a patient. In some embodiments, the subject is a control patient. In some embodiments, the subject is a participant in a study, e.g., a research study, e.g., a clinical trial. In some embodiments, the subject is an individual to whom and / or who has been administered a diagnosis and / or treatment.
[0088] Substantially: As used herein, "substantially" refers to the qualitative condition of exhibiting all or nearly all extent or degree of a characteristic or property of interest. Those skilled in the art of biology will understand that biological and chemical phenomena rarely, if ever, proceed to completion and / or perfection or achieve or avoid absolute results. Thus, the term "substantially" is used herein to capture the potential lack of completeness inherent in many biological and chemical phenomena.
[0089] Target: As used herein, a "target" is or includes a particular entity being measured. A target may be any measurable entity present in a sample, at any level, endogenously or via exogenous introduction. For example, in some embodiments, a target is a naturally occurring substance or agent (e.g., an endogenous protein). In some embodiments, a target is or includes a biomarker. In some embodiments, a target is or includes an analyte. In some embodiments, a target is or includes a therapeutic agent. In some embodiments, a target is a high abundance target (e.g., relative to one or more other targets or relative to a control level of a target). In some embodiments, a target is a low abundance target (e.g., occurring at pg / mL concentrations). In some embodiments, a target is measured indirectly, such as by reaction with a substrate and quantification of substrate consumption, cleavage (e.g., of the substrate) or other detectable modification.
[0090] Test Cassette or Test Cartridge: As used herein, a "test cassette" or "test cartridge" refers to a unit including a housing, which housing contains, at least in part, an immunoassay device as described herein. In some embodiments, the test cassette or cartridge includes a bar code or other means for reading or scanning the identification of the cassette or cartridge by a device used to receive and interpret information from the immunoassay device. In some embodiments, the test cassette is a control test cassette. In some such embodiments, a control test cassette is provided to verify or confirm one or more aspects of one or more of the assays described herein.
[0091] Test line: As used herein, a "test line" refers to a line deposited (i.e., striped) on a test strip. The test line, in some configurations, includes one or more moieties that can capture or bind one or more targets in a sample. For example, in some embodiments, the test line includes an agent. In some embodiments, the test line includes a capture agent. In some embodiments, when a target binds to a capture agent on the test line, the test line may also include a detection agent. As will be appreciated by those skilled in the art, the capture agent and competitor may be the same agent, but in a test line where the target is retained, such an agent is a capture agent. In some embodiments, the test line does not include a competitor. In some embodiments, the test line does not include a detection agent. In some embodiments, the test line is measured qualitatively and / or quantitatively. In some embodiments, as will be understood from the context, the test line serves as a control line as described herein. In some such embodiments, the capture agent on the test line may be different from the capture agent on the control line, e.g., in some embodiments, the capture agent on the control line may be specific for a detection agent, while the capture agent on the test line is specific for a target (which target may be complexed with a detection agent). In some embodiments, the test line is not measured (i.e., even if it is visible).
[0092] Test Strip: As used herein, a "test strip" is a solid phase component of an immunoassay device described herein, which solid phase includes at least one test line. In some embodiments, the test strip contacts the sample, and the sample moves into and through the solid phase by lateral flow using capillary and / or gravity mechanisms.
[0093] Therapeutic Agent: As used herein, a "therapeutic agent" generally refers to any agent that induces a desired effect when administered to an organism. As a non-limiting example, in some embodiments, the desired effect may be one or more of the following: reduction of one or more targets, increase of one or more targets, reduction or elimination of one or more symptoms of one or more diseases, disorders, or conditions. In some embodiments, an agent is considered to be a therapeutic agent if it shows a statistically significant effect across an appropriate population. In some embodiments, the appropriate population may be a population of model organisms. In some embodiments, the appropriate population may be defined by various criteria, such as a certain age group, sex, genetic background, pre-existing clinical conditions, etc. In some embodiments, a therapeutic agent is a substance that can be used to alleviate, ameliorate, relieve, inhibit, prevent, delay the onset, reduce the severity, and / or reduce the incidence of one or more symptoms or characteristics of a disease, disorder, and / or condition. In some embodiments, a therapeutic agent is an agent that has been approved or needs to be approved by a government agency before it can be commercially available for administration to humans. In some embodiments, a therapeutic agent is an agent that requires a medical prescription for administration to humans. In some embodiments, the therapeutic agent is one that is being tested and / or administered during research and development, hi some embodiments, the therapeutic agent is one that is being tested and / or administered to a subject as part of a preclinical or clinical trial.
[0094] Therapeutic regimen: "Therapeutic regimen," as that term is used herein, refers to a dosing regimen whose administration across a relevant population can be correlated with a desired or beneficial therapeutic outcome.
[0095] Treatment: As used herein, "treatment" (also "treat" or "treating") refers to any administration of a procedure, intervention, substance (e.g., corticosteroids), or any combination thereof, that partially or completely alleviates, improves, relieves, inhibits, delays the onset, reduces the severity, and / or reduces the incidence of one or more symptoms, characteristics, and / or causes of a particular disease, disorder, and / or condition (e.g., cytokine release syndrome, lupus nephritis, aHUS, etc.). For example, in some embodiments, treatment may include an intervention that includes withdrawal or removal of a substance (e.g., from a subject). In some embodiments, administration of treatment may include removal of a composition and / or addition of a different composition and / or intervention. In some embodiments, treatment may be of a subject that does not show overt signs of the associated disease, disorder, and / or condition. In some embodiments, treatment may be of a subject that shows only early signs of a disease, disorder, and / or condition. Alternatively or additionally, in some embodiments, such treatment may be of a subject who exhibits one or more established symptoms of the associated disease, disorder, and / or condition. In some embodiments, treatment may be of a subject who has been diagnosed as suffering from the associated disease, disorder, and / or condition. In some embodiments, treatment may be of a subject who is known to have one or more susceptibility factors that are statistically correlated with an increased risk of developing the associated disease, disorder, and / or condition.
[0096] complement system The complement system comprises over 50 serum and cellular proteins and plays an important role in innate and adaptive immunity. As those skilled in the art will recognize, there are three major pathways of complement activation: classical, lectin, and alternative. All three major pathways of complement activation converge on a central protein, complement component 3 (C3). C3 is a central mediator of inflammation and is activated by most factors that cause inflammation. An exemplary schematic diagram of the complement system and its pathways is shown in FIG. 1.
[0097] Complement and complement activation are associated with a wide variety of diseases, and in some cases, complement can play a role in disease pathology. In these cases, the organism's body is unable to successfully control one or more causes of inflammation, which can then change from local (or localized) to systemic. Complement activation can directly damage tissues or indirectly cause damage by overactivating cells and recruiting immune cells, which then cause tissue destruction. As non-limiting examples, some conditions that can result from complement-mediated systemic overactivation include anaphylactic shock, multiple organ failure (MOF), acute respiratory distress syndrome (ARDS), systemic inflammatory response syndrome (SIRS), and cytokine release syndrome (CRS).
[0098] C5 convertase, generated via any of three pathways, cleaves C5 to produce C5a and C5b. C5b then binds C6, C7, and C8 and catalyzes the polymerization of C9 to form the C5b-9 membrane attack complex (MAC). The assembling MAC inserts itself into the target cell membrane, forming a pore defined by a ring of C9 molecules. MAC formation causes cell lysis of the invading microorganism, and MAC formation on host cells can also cause lysis, but does not necessarily do so. The partial lytic amount of MAC on cell membranes can affect cell function in a variety of ways. The smaller cleavage products C3a, C4a, and C5a are anaphylatoxins and mediate multiple reactions in acute inflammatory responses. C3a and C5a are also potent chemotactic factors that attract cells such as neutrophils and macrophages to areas of crisis.
[0099] classic It is understood that the classical complement pathway is primarily activated by immune complexes, specifically including IgG / IgM antibodies bound to antigens. Other activators can include, for example, lipopolysaccharide (LPS), myelin, phospholipids, polyanionic compounds, C-reactive protein (CRP), pentraxin 3 (PTX3), serum amyloid component P (SAP), and microbial DNA and RNA, as well as any components or parts thereof (e.g., myelin proteins or fragments, LPS fragments, DNA fragments, etc.). The classical pathway is typically triggered by immune complexes, which are complexes of antigens bound to antibodies, generally belonging to the IgM or IgG isotype. The immune complexes then bind to complement component C1, which is composed of C1q, C1r, and C1s. The binding of C1q to the antibody-antigen complex triggers the activation of C1r and C1s. The activated C1s then cleaves component C4 to produce C4a and C4b. C4b can be covalently bound to cell surfaces, but only about 5% is bound. The remaining 95 percent reacts with water to form soluble, activated C4b. Component C2 can then associate with deposited C4b, which is then activated by C1s to C2a and C2b. C4b and C2a combine to form C4bC2a, the classical pathway (CP) C3 convertase.
[0100] CP convertase cleaves C3 to form C3a and C3b. Like activated C4b, C3b can be covalently bound to cell surfaces or can react with HO and remain in solution. Activated C3b has multiple roles. By itself, it can function as an opsonin to make decorated cells or particles more easily ingested by phagocytes. In addition, C3b can associate with C4bC2a (CP C3 convertase) to form C5 convertase. The complex, called C4bC2aC3b, is called CP C5 convertase. Alternatively, surface-bound C3b can form the core of another C3 convertase, called alternative pathway (AP) C3 convertase.
[0101] alternative The alternative pathway is often mediated by direct C3 activation by "foreign" substances, including microbial cell wall components. The alternative pathway (AP) is another mechanism by which C3 can be activated. It is typically activated by targets such as microbial surfaces and various complex polysaccharides as well as other materials. The alternative pathway can also be initiated spontaneously by cleavage of the thioester bond in C3 by a water molecule to form C3(H2O). C3(H2O) binds to factor B, which allows factor D to cleave factor B into Ba and Bb. Bb remains associated with C3(H2O) to form the C3(H2O)Bb complex, which functions as a C3 convertase, cleaving C3 and resulting in C3a and C3b.
[0102] C3b formed through this process or through the classical or lectin pathway binds to a target (e.g., on a cell surface), forms a complex with factor B, and is then cleaved by factor D to form Bb, resulting in C3bBb, which is called the alternative pathway (AP) C3 convertase. Binding of another molecule of C3b to the AP C3 convertase produces C3bBbC3b, the AP C5 convertase.
[0103] Lectins The lectin pathway is activated by polysaccharides with free mannose group(s) and / or other sugars common to fungi and bacteria. The lectin complement pathway is initiated by the binding of mannose-binding lectin (MBL) and MBL-associated serine proteases (MASPs) to carbohydrates. The MBL1 gene (known as LMAN1 in humans) encodes a type 1 essential membrane protein localized in the intermediate region between the endothelial endoplasmic reticulum and the Golgi. The MBL2 gene encodes a soluble mannose-binding protein found in serum. In the human lectin pathway, MASP1 and MASP2 are involved in the proteolysis of C4 and C2, resulting in the C3 convertase, which leads to the production of C5 convertase as described above for CP.
[0104] Lectin pathway (LP) proteins have been shown to function as activators and amplifiers of coagulation in hemostatic and thrombotic diseases. MASP-1 and MASP-2 are activated during blood clotting by activated platelets and the generation of fibrin. MASP-1 and MASP-2 are not only activated by fibrin clotting but also participate in the generation of fibrin clots. Specifically, MASP-1 has thrombin-like specificity and can therefore catalyze the formation of cross-linked fibrin. MASP-2 directly activates thrombin by cleaving prothrombin. Thus, there is a positive feedback loop in which MASP activation generates fibrin clots and clot formation activates MASPs. This is one means by which complement activation is concentrated at sites of vascular injury.
[0105] Complement and Disease The complement system is a network of fluid-phase and membrane-associated proteins designed to induce, amplify, and regulate immunity and inflammation. Crosstalk between complement and cytokine networks can shape induced immune responses and outcomes. This interaction can be broadly categorized into three categories: acute phase response, adaptive immunity directive, and sterile inflammation and regeneration. Some diseases, disorders, and / or conditions may result from, be activated, and / or be affected by one or more dysfunctions in one or more complement pathways, or complement pathway-associated components. For example, as known to those skilled in the art, some autoimmune diseases have been shown to have alterations in one or more complement system-associated proteins. In some embodiments, the technology of the present disclosure can measure one or more targets to easily provide information about an autoimmune disease at one or more different stages (e.g., pre-diagnosis, post-diagnosis, during a flare or disease progression, after treatment initiation, etc.).
[0106] For example, systemic production of many complement proteins (C3, C4, C9, C4BP, MBL, factor B, and C1-INH) is controlled by cytokines (IL6 and IL1 families) released during the acute phase response (Gabay and Kushner, 1999, NEJM, 340:448-54, incorporated herein by reference in its entirety). Complement activation amplifies the acute phase response by inducing IL1 and upregulating APR proteins such as CRP (Szalai et al., 2000, Journal of immunology 165:1030-35, incorporated herein by reference in its entirety). Thus, amplification between these two systems can rapidly follow the development of an inflammatory trigger if the regulatory mechanisms are missing or overwhelmed.
[0107] In addition to systemic production, local production of complement components also occurs and is under regulation by the action of cytokines. For example, expression of C3 by epithelial cells is enhanced by IL1β, IFN-γ and TNFα stimulation (Kulkarni et al., 2019, Am J Respir Cell Mol Biol 60:144-157, incorporated herein by reference in its entirety), and these cytokines also upregulate C3, factor D and factor B production by endothelial cells (Raedler et al., 2009, Am J Transplant 9:1784-1795, incorporated herein by reference in its entirety). Furthermore, enhanced production of factor H by endothelial cells is stimulated by IFN-γ (Brooimans et al., 1989, Journal of immunology 142:2024-30, incorporated herein by reference in its entirety). Similar to systemic activation, reciprocal regulation of expression occurs, and complement activation fragments also regulate local cytokine responses. C3a and C5a upregulate IL-8, IL-1B and RANTES, and C5a reduces IL-6 expression by endothelial cells (Monsinjon et al., 2003, FASEB J 17:1003-14, incorporated herein by reference in its entirety). C5a / C5aR interactions suppress TLR-induced IL-6 and TNF production by macrophages while enhancing these responses in human monocytes (Seow et al., 2013, Journal of immunology 191:4308-16, incorporated herein by reference in its entirety).
[0108] Early innate immune responses are primarily shaped by bidirectional crosstalk between the complement system and TLRs, which appears to fine-tune the balance between inflammatory pathology and homeostatic immunity (Hajishengallis and Lambris, 2016, Immunol Rev 274:233-44, incorporated herein by reference in its entirety). Microbial products that initiate TLR signaling, including LPS (TLR4), zymosan (TLR2 / 6), and CpG DNA (TLR9), also function as complement activators (Zhang et al., 2007, Blood 110:228-36; Mangsbo et al., 2009, Journal of Immunology, 183:6724-32, incorporated herein by reference in its entirety). This can result in the production of complement-activating fragments that modulate TLR-dependent responses through interactions with their respective receptors. In addition, TLR-induced cytokines such as IL-6 promote the expression of complement components, including expression of FB and C3aR / C5aR (Zhang et al., 2007, Blood 110:228-36; Rittirsch et al., 2008, Nat Rev Immunol 8:776-87, the entire contents of which are incorporated herein by reference). These systems function both synergistically and antagonistically to regulate induced responses. For example, signaling through C3aR / C5aR with concomitant TLR stimulation drives synergistic increases in TNFα, IL-1β, IL-10 and IL-6 (Zhang et al., 2007). However, C1q acts antagonistically by inhibiting TLR7 / 9-induced IFNα production. Thus, TLRs can regulate the expression of complement factors, as well as the expression and / or activation of complement receptors, which in turn can amplify or limit TLR-dependent responses.
[0109] Complement also directs the immune system to respond appropriately to pathogens, but also limits pathogenic inflammation (Ricklin et al., 2010, Nature Immunology 11:785-97, incorporated herein by reference in its entirety). This influence begins with complement-TLR interactions that shape the local inflammatory environment, and extends to the direct effects of complement receptor engagement on immune cells. For example, C1q inhibits IFNα production directly through interaction with LAIR1 on pDCs and indirectly through uptake of C1q-IC by monocytes. In human monocytes, C3a / C3aR interactions activate inflammasomes and IL-1β secretion, and C3aR-stimulated monocytes drive Th17 responses via enhanced IL-1β production (Asgari et al., 2013, Blood 122:3473-81, incorporated herein by reference in its entirety). However, uptake of C1q-opsonized apoptotic lymphocytes by LPS-stimulated human macrophages increases expression of IFNα, IL-27, and IL-10 and inhibits inflammasome activation (cleavage of IL-1β) (Benoit et al., 2012, Journal of Immunology 188:5682-93, incorporated herein by reference in their entireties). Conversely, inflammasome activation and release of IL-1β is further influenced by stimuli of complement activation, including partial lytic MAC, and is further primed by C5a in combination with TNF (Laudisi et al., 2013, Journal of Immunology 191:1006-10; Espevik et al., 2014, Journal of Immunology 192:2837-45, each of which is incorporated herein by reference in its entirety).
[0110] The complement system also has multiple roles in shaping adaptive responses, including regulating T cell responses. This includes directing the initiation phase, driving lineage commitment, and regulating the contraction phase. Binding of locally produced C5a to its receptor C5aR expressed on APCs upregulates IL-12 production, which then drives T cell differentiation toward an IFN-γ producing phenotype (Lalli et al., 2007, Journal of Immunology, 179:5793-802, incorporated herein by reference in its entirety). Locally produced C5a also enhances CD8+ T cell IFN-γ and perforin expression (Raedler et al., 2009, Am J Transplant 9:1784-1795, incorporated herein by reference in its entirety). Cross-linking of CD3 and the complement regulator CD46 on human CD4+ T cells in the presence of IL-2 results in the induction of a regulatory T cell phenotype and the release of IL-10 (Kemper and Atkinson, 2007, Nat Rev Immunol 7:9-18; Cardone et al., 2010, Nature Immunology 11:862-871, each of which is incorporated herein by reference in its entirety). CD46-generated regulatory T cells also express granzyme B and perforin and exhibit contact-dependent cytotoxicity against activated CD4+ and CD8+ T cells (Grossman et al., 2004, Immunity, 21:589-601; Grossman et al., 2004, Blood 104:2840-48, each of which is incorporated herein by reference in its entirety). Thus, regulatory T cells generated by CD46 cross-linking have three mechanisms to suppress effector T cell responses: secretion of IL-10, direct cytotoxicity through synthesis of granzyme B and perforin, and competition for IL-2 as a growth factor (Lalli et al., 2007, Journal of Immunology, 179:5793-802, incorporated herein by reference in its entirety).Notably, CD46-induced regulatory T cells enable DC activation through dual secretion of GM-CSF and soluble CD40 (Barchet et al., 2006, Blood 107:1497-1504, each of which is incorporated herein by reference in its entirety). Cross-linking of CD46 on human monocytes / macrophages suppresses IL-12 induction, providing a possible mechanism for measles virus-induced immune suppression (Karp et al., 1996, Science 273:228-231, each of which is incorporated herein by reference in its entirety).
[0111] Complement plays an essential role in homeostasis through the resolution of inflammation by promoting pathogen clearance as well as contributing to sterile inflammation, wound healing and regeneration. Apoptotic T cells rapidly lose CD46 from the cell surface, and removal of this protective signal promotes phagocytosis (Elward et al., 2005, The Journal of Biological Chemistry 280:36342-354, incorporated herein by reference in its entirety). The interaction of iC3b on opsonized apoptotic cells with its receptor, CR3 on phagocytes, promotes clearance and is accompanied by IL-12 downregulation to prevent unwanted inflammation during apoptotic cell clearance. Additionally, when damage occurs, complement contributes to homeostasis by promoting damage repair. This pro-repair role is evident in liver regeneration, where C3a / C5a induces IL6 and TNFα signaling to promote hepatocyte growth and proliferation (Markiewski et al., 2006, Molecular Immunology, 43:45-56, incorporated herein by reference in its entirety). In addition, C3a and C5a induce the expression of VEGF, which is necessary for tissue repair after injury (Nozaki et al., 2006, PNAS, 103:2328-333, incorporated herein by reference in its entirety). Thus, complement contributes to the resolution of inflammation by participating in the non-inflammatory clearance of apoptotic cells and immune complexes and promoting the repair of damaged tissues.
[0112] In parallel with direct effects on cellular metabolic machinery, autocrine CD46 signaling also leads to increased expression of interleukin 2Rα (IL-2Rα, CD25) and assembly of the high affinity IL-2 receptor (Liao W et al., Curr Opin Immunol., 2011; 23(5): 598-604; Liao W et al., Immunity, 2013; 38(1): 13-25; West EE et al., Annu Rev Immunol. 2018; 36: 309-338; Merle NS et al., Br J Pharmacol., 2020; 1-17, each of which is incorporated herein by reference in its entirety).
[0113] Without being bound to any particular theory, complement activation in the immediate and early post-trauma period (e.g., after onset of disease, after injury, etc.) may occur through several different mechanisms, possibly by use of any one or more of the three complement pathways. Detecting such activation with adequate reliability, reproducibility, sensitivity, specificity, accuracy, and / or speed (e.g., at the point of care and at regular monitoring intervals after injury) remains a challenge in many situations. The present disclosure provides techniques that allow efficient, rapid, sensitive, specific, reliable, and / or accurate measurement of one or more targets (e.g., one or more complement proteins). With timely information, clinicians will be able to provide more appropriate and more rapid care that, in some embodiments, may prevent or improve certain outcomes that would not have been achieved in the absence of the techniques provided by the present disclosure (e.g., prevention of ongoing injury through treatment, etc.).
[0114] As will be understood by those skilled in the art, some diseases, disorders or conditions are characterized or affected by the alteration of one or more complement proteins or one or more complement-related proteins.Despite the numerous diseases, disorders and conditions associated with one or more alterations of one or more complement pathway proteins / related proteins, in many cases, there remain few or no satisfactory treatment options.To complicate matters, there is a lack of satisfactory diagnostic, prognostic and monitoring methods in the field, and therefore a lack of satisfactory treatment for many such diseases, disorders and conditions.
[0115] As will be appreciated by those skilled in the art, targeted measurements in the complement system are known to be difficult for many reasons. For example, some complement proteins are vulnerable to changes due to handling during and / or after collection of the sample, which can lead to inaccurate measurements when such proteins are assayed. For example, handling during or after collection can cause activation of a particular complement protein (C3), leading to the generation of cleavage fragments and / or degradation.
[0116] In addition, some complement proteins are high abundance targets, and in previously available assays, measurement of such targets required extensive (e.g., several serial) dilutions to be within a range in which the assay can measure the target and prevent inaccurate measurements due to prozones. However, techniques used to modify assays for high abundance targets run the risk of preventing accurate measurement of low abundance targets.
[0117] Furthermore, endogenous levels of a particular complement protein or complement cleavage fragment may be very low in healthy patients or in patients being treated with a particular therapy, and therefore the amount of a given target may vary greatly between healthy subjects or a single subject and one or more diseases, disorders, or conditions in which complement pathway proteins complement pathway-related proteins are altered. In addition, as will be appreciated by those skilled in the art, inaccurate measurement of low abundance targets, such as, for example, a particular complement cleavage fragment, may be problematic for a variety of reasons, including, but not limited to, the understanding that small changes in a particular cleavage fragment or low abundance target may be physiologically relevant, but difficult to measure due to the challenges described herein. The present disclosure provides techniques that overcome many of these challenges. Thus, in some embodiments, the techniques of the present disclosure improve the ability to accurately measure one or more targets in a sample (e.g., a complement-related target in a liquid sample).
[0118] For example, and by way of non-limiting example, in some embodiments, a subject may have an increase in complement C3, but despite the highly abundant amount of C3 in a sample from the patient, previously available assays were only able to measure C3 in a given sample within a narrow range. Furthermore, previously available assays that could measure C3 relied on serial dilutions to do so, which, as recognized by the present disclosure, can be a source of error in the accurate measurement of C3 and / or C3 therapeutics. For example, in the case of C3 therapeutics, serial dilutions result in dissociation and falsely elevated levels of "free" C3 being reported. Thus, the present disclosure provides, among other things, methods of diagnosis, monitoring, prevention, treatment of one or more complement-mediated diseases, disorders, conditions, and complications thereof.
[0119] Without being bound to any particular theory, the present disclosure contemplates that the ability to rapidly, accurately, sensitively, specifically, efficiently, and / or reliably measure one or more targets (e.g., complement-related targets) in a sample from a patient will improve outcomes in diagnosis, monitoring, and treatment. For example, the decision to administer one or more treatments, including the dose and / or timing thereof, may vary depending on the results of one or more measurements of a particular target (e.g., one or more complement-related targets). Complement-related diseases, disorders, and / or conditions may be acute or chronic and may be life-threatening / impairing in quality of life if not properly diagnosed, monitored, and / or treated. Thus, it is an object of the present disclosure to provide techniques that improve treatment of complement-related diseases. In some embodiments, improved treatment is achieved by improving the reliability, efficiency, sensitivity, specificity, accuracy, and / or how quickly one or more targets can be measured.
[0120] In some embodiments, the target may be MASP-2 and / or the disease may be COVID (i.e., SARS-COV-2). In some embodiments, MASP-2 may be altered in patients suffering from or at risk of suffering from COVID or complications associated therewith. For example, as known to those skilled in the art, in some embodiments, MASP-2 may directly bind to the SARS-COV-2 N protein. Furthermore, deposition of MASP-2, C4d, and C5b-9 has been demonstrated in the pulmonary microvasculature of patients with severe COVID-19. Thus, the technology of the present disclosure may be used to accurately, reliably, reproducibly, and rapidly measure MASP-2 to diagnose, monitor, prevent, and / or treat one or more symptoms associated with COVID, or the risk of COVID infection, or complications associated therewith.
[0121] Another non-limiting example is vascular injury. For example, as known to those skilled in the art, following vascular injury, complement factor H (FH) can protect subjects from excessive complement activation. For example, glycocalyx degradation causes vascular endothelial cells to lose the ability to bind FH, resulting in uncontrolled complement activation and injury. Mutations in FH are also considered strong genetic risk factors for diseases such as age-related macular degeneration (AMD), aHUS, and complement 3 glomerulopathy (C3G). However, detecting such activation with adequate reliability, reproducibility, accuracy, high sensitivity, specificity, and / or speed (e.g., at the point of care and at regular monitoring intervals after injury) is difficult and paramount to successfully prevent or treat any sequelae of vascular injury. The present disclosure provides techniques that can overcome these challenges to provide measurements of one or more targets with accuracy, reliability, specificity, reproducibility, reliability, high sensitivity, and / or speed, as well as in an easy-to-use manner, such as at the point of care, with little or no sample pretreatment. Such a technique would therefore improve treatment options for donors in the setting of vascular injury.
[0122] In some embodiments, the technology provided by the present disclosure facilitates the monitoring, diagnosis and treatment of diseases, disorders and / or conditions that have previously been difficult to accurately and reliably monitor, diagnose and / or treat. For example, in some embodiments, a subject may have or be at risk for developing age-related macular degeneration (AMD), complement 3 glomerulopathy (C3G), hematopoietic stem cell transplant-associated thrombotic microangiopathy (HSCT-TMA), complement-mediated thrombotic microangiopathy (CM-TMA), atypical hemolytic uraemic syndrome (aHUS), thrombotic thrombocytopenic purpura (TTP), COVID19, lupus erythematosus, lupus nephritis, cytokine release syndrome, Alzheimer's disease (AD), or a combination thereof. Thus, in contrast to previously available assays, the technology of the present disclosure will enable efficient, accurate, sensitive, reliable, specific and / or rapid results that allow subjects to be appropriately diagnosed and treated for the various diseases, disorders or conditions contemplated herein.
[0123] target The present disclosure provides techniques for measuring one or more targets in one or more samples. In some embodiments, the present disclosure provides techniques that improve the efficiency, sensitivity, accuracy, specificity, reliability and / or speed of target measurement while improving and expanding the range in which targets can be detected compared to previously available assays. In some embodiments, the present disclosure provides for the first time techniques that can measure one or more complement pathways or complement pathway-related targets in the context of diagnosing, monitoring, preventing and / or treating one or more complement-related diseases. In some such embodiments, the diagnosis, monitoring, prevention and treatment are performed in a point-of-care environment. As described herein, one or more targets and diseases associated therewith will be known to one of skill in the art, given the context.
[0124] As provided herein, the present disclosure recognizes one source of problems in measuring a particular target sensitively, specifically, accurately, reliably, reproducibly, and / or rapidly. For example, as described herein, in some embodiments, the present disclosure recognizes that diluting a sample to measure a target level can provide an inaccurate measurement due to one or more pre-treatment steps before the sample is measured. For example, in some embodiments, offline dilution of the sample results in dissociation of the target from the target:therapeutic complex, causing an inaccurate measurement.
[0125] Importantly, however, the present disclosure also provides insight that a particular target may be a high or low abundance target. In these cases, in-line dilution provides an accurate measurement of such targets, which was not possible with previously available assays.
[0126] In some embodiments, the target is a naturally occurring substance or agent (e.g., an endogenous protein). In some embodiments, the target is or comprises a biomarker. In some embodiments, the target is or comprises an analyte. In some embodiments, the target is or comprises a therapeutic agent. In some embodiments, the target is a complex, mixture, or hybrid of a naturally occurring substance or agent and a non-naturally occurring substance or agent (e.g., a therapeutic agent). In some embodiments, the target is a combination of a biomarker and a therapeutic agent.
[0127] In some embodiments, a target is considered a high abundance target. For example, in some embodiments, a high abundance target is one that is highly concentrated in a sample compared to one or more other targets or compared to a control level of the target. That is, in some embodiments, the level of the target is known to be highly concentrated in either a non-pathological or pathological state such that a standard assay (e.g., ELISA) requires dilution to measure such a target. In some such embodiments, the present disclosure provides several advantages for measuring such high abundance targets without requiring more than minimal, or in some embodiments, "off-line" dilution. That is, the techniques provided by the present disclosure can manage samples such that high abundance targets are measured efficiently, accurately, specifically, reliably, sensitively, and / or rapidly. For example, in some embodiments, C3 is a typically high abundance target.
[0128] In some embodiments, the target is considered to be a low abundance target. For example, in some embodiments, a low abundance target may be a target that generally occurs at very low concentrations (e.g., pg / mL) or a target that occurs in very low amounts compared to one or more other targets, such as a high abundance target. That is, in some embodiments, the level of the target is known to be low in either a non-pathological state or a pathological state. In some embodiments, the target may be a low abundance target in a non-pathological state and a high abundance target in a pathological state, or vice versa. As a non-limiting example, IL-6 is one such target that is generally considered to be a low abundance target in a non-pathological state and, in some embodiments, may be a high abundance target in a pathological situation.
[0129] In some embodiments, the present disclosure provides several advantages for measuring low abundance targets without requiring any significant pre-treatment steps.For example, in some embodiments, the present disclosure provides the advantage of being able to measure one or more targets without performing significant offline dilutions on the sample before measurement.That is, in contrast to previously available assays, in some embodiments, the present disclosure provides the advantage of not having to perform several successive offline dilutions (e.g., as in ELISA) before measuring the target in the sample.
[0130] In some embodiments, the present disclosure provides techniques that require few pre-processing steps. For example, in some embodiments, the techniques provided herein can perform in-line normalization of samples. In some such embodiments, accurate measurements from, for example, urine samples are achieved by multiplexing creatinine measurements in the assays of the present disclosure. Such in-line normalization provides several advantages, including, but not limited to, no need to dilute or manipulate the sample before measuring any given target. Furthermore, in-line normalization allows accurate measurement of one or more targets in a heterogeneous sample, such as urine, which may be at different concentrations even in a single patient. Thus, the techniques provided by the present disclosure can efficiently, accurately, specifically, sensitively, reliably, and / or rapidly measure targets, including high and low abundance targets, in samples that would previously have required extensive pre-processing steps (e.g., dilution or normalization intervention).
[0131] Importantly, and as will be understood by those skilled in the art, the present disclosure does not consider any given target to be a categorically high or low abundance target. Rather, as will be understood, in a given situation, in some embodiments, a target may vary from low abundance to high abundance, such as when measured from a sample taken during a non-pathological condition, compared to a sample taken during a pathological condition. For example, without being bound by any particular theory, in some immune-mediated conditions (e.g., CM-TMA, aHUS, HSCT-TMA, cytokine release syndrome), the level of sC5b-9 may be considered to be high abundance, compared to the level of sC5b-9 in the absence of such immune-mediated condition.
[0132] In addition, in some embodiments, the type of sample may affect whether a target is high or low abundance. That is, in some embodiments, whether the sample is blood, plasma, urine, cerebrospinal fluid, or another biological fluid may affect whether a target is high or low abundance. For example, sC5b-9 has previously been known to be difficult or even impossible to measure or detect in urine. The technology provided by the present disclosure can measure sC5b-9. Specifically, as described herein, the technology of the present disclosure allows for the detection, as well as quantification, of levels of sC5b-9 in urine samples. In some embodiments, the ability to measure targets such as sC5b-9 provides previously unavailable diagnostic, monitoring, and therapeutic methods to humans in need thereof.
[0133] In some embodiments, the target is measured by comparing with a reference level or ratio is a reference level or ratio established for the target. In some embodiments, the target measurement value is compared with a reference level or ratio obtained from a previous sample. In some embodiments, the sample may be obtained from the same or different subject. For example, in some embodiments, a sample from a subject may be compared with a measurement value of a sample taken from the same subject at a different time. In some embodiments, the level or ratio of one or more indicator(s) (e.g., complement proteins) is compared with a reference level or ratio obtained from a different subject or a population of subjects (e.g., a composite score), or a normal reference range.
[0134] In some embodiments, a target can be a low abundance target in one state (e.g., the presence or absence of a disease, disorder, or condition) and a high abundance target in another state (e.g., the presence or absence of the same disease, disorder, or condition).
[0135] In some embodiments, a target that is not detected may be considered absent. In some such embodiments, an absent target may not be present in a sample or may be present below the LLOQ of an assay described herein. In some embodiments, a target may be absent in one sample from a subject and present in another sample from the same subject. For example, in some embodiments, a target may be absent in blood from a subject but present in urine, or vice versa. In some embodiments, a target may be present in more than one sample from the same subject, for example, present in both blood and urine.
[0136] Exemplary Targets Complement C3 Complement component C3 is useful as a general alert biomarker that an organism's body is responding to some form of physiological crisis, such as injury, infection, or other disease process. In some embodiments, the level of C3 is elevated (relative to a reference level of C3) in association with one or more diseases, disorders, or conditions. In some embodiments, the level of C3 is decreased (relative to a reference level of C3) in association with one or more diseases, disorders, or conditions. In some embodiments, the level of C3 is unchanged (relative to a reference level of C3) in association with one or more diseases, disorders, or conditions, but the levels of other complement proteins or components thereof are altered. For example, as a non-limiting example, in some embodiments, the level of C3 is unchanged, but the level of iC3b may be increased or decreased.
[0137] In some embodiments, intact C3 may be measured in a sample in the range of 0.025-5 mg / mL.
[0138] In some embodiments, a "normal" intact C3 level in a sample (e.g., a bodily fluid) is within a range having a lower boundary and an upper boundary that is higher than the lower boundary. In some embodiments, a "normal" intact C3 level in a sample is within the range of 0.025-5 mg / mL. In some embodiments, the lower boundary is at least about 25 μg / mL, 30 μg / mL, 35 μg / mL, 40 μg / mL, 45 μg / mL, 50 μg / mL, 55 μg / mL, 60 μg / mL, 65 μg / mL, 70 μg / mL, 75 μg / mL, 80 μg / mL, 85 μg / mL, 90 μg / mL, 95 μg / mL, 100 μg / mL, 110 μg / mL, 120 μg / mL, 130 μg / mL, 140 μg / mL, 150 μg / mL, 160 μg / mL, 170 μg / mL, 180 μg / mL, 190 μg / mL, 200 μg / mL, 210 μg / mL, 220 μg / mL, 230 μg / mL, 240 μg / mL, 250 μg / mL, 260 μg / mL, 270 μg / mL, 280 μg / mL, 290 μg / mL, 300 μg / mL, 310 μg / mL, 320 μg / mL, 330 μg / mL, 340 μg / mL, 350 μg / mL, 360 μg / mL, 370 μg / mL, 380 μg / mL, 390 μg / mL, 400 μg / mL, 410 μg / mL, 420 μg / mL, 430 μg / mL, 440 μg / mL, 450 μg / mL, 460 μg / mL, 470 μg / mL, 480 μg / mL, 490 μg / mL, 500 μg / mL, 510 μg / mL, 5 0μg / mL, 190μg / mL, 200μg / mL, 210μg / mL, 220μg / mL, 230μg / mL, 240μg / mL, 250μg / mL, 260μg / mL, 270μg / mL, 280μg / mL, 290μg / mL, 300 μg / mL, 310 μg / mL, 320 μg / mL, 330 μg / mL, 340 μg / mL, 350 μg / mL, 360 μg / mL, 370 μg / mL, 380 μg / mL, 390 μg / mL, 400 μg / mL, 410 μg / mL, 420 μg / mL g / mL, 430μg / mL, 440μg / mL, 450μg / mL, 460μg / mL, 470μg / mL, 480μg / mL, 490μg / mL, 500μg / mL, 510μg / mL, 520μg / mL, 530μg / mL, 540μg / mL, 550μg / mL, 560μg / mL, 570μg / mL, 580μg / mL, 590μg / mL, 600μg / mL, 610μg / mL, 620μg / mL, 630μg / mL, 640μg / mL, 650μg / mL, 660μg / mL mL, 670μg / mL, 680μg / mL, 690μg / mL, 700μg / mL, 710μg / mL, 720μg / mL, 730μg / mL, 740μg / mL, 750μg / mL, 760μg / mL, 770μg / mL, 780μg / m L, 790μg / mL, 800μg / mL, 810μg / mL, 820μg / mL, 830μg / mL, 840μg / mL, 850μg / mL, 860μg / mL, 870μg / mL, 880μg / mL, 890μg / mL, 900μg / mL,910μg / mL、920μg / mL、930μg / mL、940μg / mL、950μg / mL、960μg / mL、970μg / mL、980μg / mL、990μg / mL、1000μg / mL、1100μg / mL、1200μg / mL、1300μg / mL、1400μg / mL μg / mL、1500μg / mL、1600μg / mL、1700μg / mL、1800μg / mL、1900μg / mL、2000μg / mL、2100μg / mL、2200μg / mL、2300μg / mL、2400μg / mL、2500μg / mL、2600μg / mL 、2700μg / mL、2800μg / mL、2900μg / mL、3000μg / mL、3100μg / mL、3200μg / mL、3300μg / mL、3400μg / mL、3500μg / mL、3600μg / mL、3700μg / mL、3800μg / mL、3900μg / mL μg / mL、4000μg / mL、4100μg / mL、4200μg / mL、4300μg / mL、4400μg / mL、4500μg / mL、4600μg / mL、4700μg / mL、4800μg / mL、4900μg / mL or some more. In the embodiment, the upper limit is at least 5000μg / mL, 4950μg / mL, 4850μg / mL, 4750μg / mL, 4650μg / mL, 4550μg / mL, 4450μg / mL, 4350μg / mL, 4250μg / mL, 4050μg / mL. / mL、3950μg / mL、3850μg / mL、3750μg / mL、3650μg / mL、3550μg / mL、3450μg / mL、3350μg / mL、3250μg / mL、3150μg / mL、3050μg / mL、2950μg / mL、2850μg / mL、2 750μg / mL、2650μg / mL、2550μg / mL、2450μg / mL、2350μg / mL、2250μg / mL、2150μg / mL、2050μg / mL、1950μg / mL、1850μg / mL、1750μg / mL、1650μg / mL、1550μg / mL、1450μg / mL、1350μg / mL、1250μg / mL、1150μg / mL、1050μg / mL、950μg / mL、850μg / mL、750μg / mL、650μg / mL、550μg / mL、450μg / mL、350μg / mL、250μg / mL、150μg / mL, 100μg / mL, 95μg / mL, 90μg / mL, 85μg / mL, 80μg / mL, 75μg / mL, 70μg / mL, 65μg / mL, 60μg / mL, 55μg / mL, 50μg / mL, 45μg / mL, 40μg / m L, 35μg / mL, 30μg / mL, 25μg / mL, 20μg / mL, 19μg / mL, 18μg / mL, 17μg / mL, 16μg / mL, 15μg / mL, 14μg / mL, 13μg / mL, 12μg / mL, 11μg / mL, 10μg / m L, 9μg / mL, 8μg / mL, 7μg / mL, 6μg / mL, 5μg / mL, 4.5μg / mL, 4μg / mL, 3.5μg / mL, 3μg / mL, 2.5μg / mL, 2μg / mL, 1.9μg / mL, 1.8μg / mL, 1.7μg / mL, It may be 1.6μg / mL, 1.5μg / mL, 1.4μg / mL, 1.3μg / mL, 1.2μg / mL, 1.1μg / mL, 1.0μg / mL, 0.9μg / mL, 0.8μg / mL, 0.7μg / mL, 0.6μg / mL or less. In some embodiments, a "normal" level of intact C3 is in the range of .025 μg / mL to 5 mg / mL, in other embodiments, a "normal" level of intact C3 is in the range of 100 μg / mL to 4 mg / mL, in other embodiments, a "normal" level of intact C3 is in the range of 100 μg / mL to 3 mg / mL, in other embodiments, a "normal" level of intact C3 is in the range of 200 μg / mL to 2 mg / mL, in other embodiments, a "normal" level of intact C3 is in the range of 500 μg / mL to 1.5 mg / mL, in other embodiments, a "normal" level of intact C3 is in the range of 500 μg / mL to 1.0 mg / mL, and in other embodiments, a "normal" level of intact C3 is in the range of 500 μg / mL to 750 μg / mL.
[0139] In some embodiments, intact C3 is detected using a non-cross-reactive agent, such as a non-cross-reactive antibody or other C3 binding agent.
[0140] C3a Complement component C3a is one of the cleavage products of C3. As known to those skilled in the art, in a given situation, C3a can have various pro-inflammatory and anti-inflammatory effects. C3a is a volatile biomarker with a very short half-life of approximately 2 minutes. Therefore, there is an unmet need for a method that can measure C3a in a sample quickly, accurately, sensitively, specifically, and reliably. In some embodiments, the level of C3a is elevated in association with one or more diseases, disorders, or conditions (compared to a reference level of C3a). In some embodiments, the level of C3a is decreased in association with one or more diseases, disorders, or conditions (compared to a reference level of C3a). In some embodiments, the level of C3a is not changed in association with one or more diseases, disorders, or conditions (compared to a reference level of C3a), but the levels of other complement proteins or components thereof are changed. In some embodiments, the level of C3a is elevated or decreased, while the level of C3 is not changed overall.
[0141] In some embodiments, C3a may be measured in a sample in the range of 1-3000 ng / mL.
[0142] In some embodiments, a "normal" C3a level in a sample (e.g., a bodily fluid) is within a range having a lower boundary and an upper boundary that is higher than the lower boundary, hi some embodiments, a "normal" C3a level in a sample is within the range of 1-3000 ng / mL. In some embodiments, the lower boundary is at least about 1 ng / mL, 2 ng / mL, 3 ng / mL, 4 ng / mL, 5 ng / mL, 6 ng / mL, 7 ng / mL, 8 ng / mL, 9 ng / mL, 10 ng / mL, 11 ng / mL, 12 ng / mL, 13 ng / mL, 14 ng / mL, 15 ng / mL, 16 ng / mL, 17 ng / mL, 18 ng / mL, 19 ng / mL, 20 ng / mL, 25 ng / mL, 30 ng / mL, 35 ng / mL, 40 ng / mL, 45 ng / mL, 50 ng / mL, 55 ng / mL, 60 ng / mL, 65 ng / mL, 70 ng / mL, 75 ng / mL, 80 ng / mL, 85 ng / mL, 90 ng / mL, 95 ng / mL, 100 ng / mL, 150 ng / mL, 200 ng / mL, 250 ng / mL, 300 ng / mL, 350ng / mL, 400ng / mL, 450ng / mL, 500ng / mL, 550ng / mL, 600ng / mL, 650ng / mL, 700ng / mL, 750ng / mL, 800n g / mL, 850ng / mL, 900ng / mL, 950ng / mL, 1000ng / mL, 1100ng / mL, 1200ng / mL, 1300ng / mL, 1400ng / mL, 150 The concentration may be 0 ng / mL, 1600 ng / mL, 1700 ng / mL, 1800 ng / mL, 1900 ng / mL, 2000 ng / mL, 2100 ng / mL, 2200 ng / mL, 2300 ng / mL, 2400 ng / mL, 2500 ng / mL, 2600 ng / mL, 2700 ng / mL, 2800 ng / mL, 2900 ng / mL, 3000 ng / mL or more.In some embodiments, the upper boundary is at least about 3000 ng / mL, 2950 ng / mL, 2850 ng / mL, 2750 ng / mL, 2650 ng / mL, 2550 ng / mL, 2450 ng / mL, 2350 ng / mL, 2250 ng / mL, 2150 ng / mL, 2050 ng / mL, 1950 ng / mL, 1850 ng / mL, 1750 ng / mL, 2850 ng / mL, 2950 ng / mL, 3000 ng / mL, 3150 ng / mL, 3250 ng / mL, 3350 ng / mL, 3450 ng / mL, 3500 ng / mL, 3650 ng / mL, 3750 ng / mL, 3850 ng / mL, 3950 ng / mL, 4000 ng / mL, 4150 ng / mL, 4250 ng / mL, 4300 ng / mL, 4450 ng / mL, 4500 ng / mL, 4650 ng / mL, 4750 ng / mL, 4850 ng / mL, 4950 ng / mL, 5000 ng / mL, 5150 ng / mL, 5250 ng / mL, 5300 ng / mL, 5400 ng / mL, 5500 ng / mL, 5600 ng / mL, 5750 ng / mL, 5800 ng / mL, 5950 ng / mL, 6000 ng / mL, 6150 ng / mL, 6250 ng / mL, 6300 ng / mL, mL, 1650ng / mL, 1550ng / mL, 1450ng / mL, 1350ng / mL, 1250ng / mL, 1150ng / mL, 1050ng / mL, 1000ng / mL, 975ng / mL, 925ng / mL, 875ng / mL, 825ng / mL, 775ng / mL, 725ng / mL, 675ng / mL, 625ng / mL, 575ng / mL, 525ng / mL, 475ng / mL, 425ng / mL, 375ng / mL, 325ng / mL, 275ng / mL, 225ng / mL, 175ng / mL, 125ng / mL, 100ng / mL, 95ng / mL, 90ng / mL, 85ng / mL, 80ng / mL, 75ng / mL, 70ng / mL, 65ng / mL, 60ng / mL, 55ng / mL, 50ng / mL, 45ng / mL, 40ng / mL, 35ng / mL, 30ng / mL, 25ng / mL, 20ng / mL, 19ng / mL, 18ng / mL, 17ng / mL, 16ng / mL, 15ng / mL, 14ng / mL, 13ng / mL, 12ng / mL, 11ng / mL, 10ng / mL, 9ng / mL or lower.In some embodiments, a "normal" level of intact C3 is in the range of 1-3000 ng / mL, in other embodiments, a "normal" level of intact C3 is in the range of 1-2500 ng / mL, in other embodiments, a "normal" level of intact C3 is in the range of 1-2000 ng / mL, in other embodiments, a "normal" level of intact C3 is in the range of 1-1500 ng / mL, in other embodiments, a "normal" level of intact C3 is in the range of 1-1000 ng / mL, and in other embodiments, a "normal" level of intact C3 is in the range of 1- In other embodiments, "normal" levels of intact C3 are in the range of 750 ng / mL, and in other embodiments, "normal" levels of intact C3 are in the range of 1-500 ng / mL, and in other embodiments, "normal" levels of intact C3 are in the range of 2.5 ng / mL-300 ng / mL, and in other embodiments, "normal" levels of intact C3 are in the range of 4.5-200 ng / mL, and in other embodiments, "normal" levels of intact C3 are in the range of 25 ng / mL-100 ng / mL, and in other embodiments, "normal" levels of intact C3 are in the range of 50 ng / mL-100 ng / mL.
[0143] In some embodiments, C3a is detected using a non-cross-reactive binding agent.
[0144] iC3b iC3b protein is a breakdown product of C3, as shown in FIG. 1. In some embodiments, iC3b can be a valuable marker of inflammatory response. Importantly, in some embodiments, iC3b has a half-life of 30-90 minutes and serves as a less volatile (compared to C3a) but still rapidly responsive biomarker. However, iC3b is generally present at much lower levels than intact or total C3 in patient samples. Thus, even a small degree of crosstalk (e.g., 1%) between intact C3 protein and an iC3b-specific detection agent is highly likely to generate a false-positive iC3b signal at twice the level of normal circulating iC3b. Thus, the present disclosure provides techniques that overcome this and other challenges to improve the efficiency, accuracy, sensitivity, specificity, reliability and / or speed of measurement of iC3b.
[0145] In some embodiments, iC3b in a sample may be elevated compared to a control, indicating that C3 has been activated and further cleaved into its activation product, iC3b. In some embodiments, the level or concentration of intact C3 in a sample is decreased compared to a control, indicating that intact C3 has been converted to its degradation or activation products and is therefore depleted in the individual.
[0146] In some embodiments, iC3b may be measured in a sample in the range of 0.2-50 μg / mL.
[0147] In some embodiments, a "normal" level of iC3b in a sample (e.g., a bodily fluid) is within a range having a lower boundary and an upper boundary that is higher than the lower boundary. In some embodiments, a "normal" level of iC3b in a sample is within the range of 0.2-50 μg / mL. In some embodiments, the lower boundary is at least about 0.2 μg / mL, 0.3 μg / mL, 0.4 μg / mL, 0.5 μg / mL, 0.6 μg / mL, 0.7 μg / mL, 0.8 μg / mL, 0.9 μg / mL, 1 μg / mL, 2 μg / mL, 3 μg / mL, 4 μg / mL , 5μg / mL, 6μg / mL, 7μg / mL, 8μg / mL, 9μg / mL, 10μg / mL, 11μg / mL, 12μg / mL, 13μg / mL, 14μg / mL, 15μg / mL, 16μg / mL, 17μg / mL, 18μg / mL, 19μg / mL, 20μg / mL , 21μg / mL, 22μg / mL, 23μg / mL, 24μg / mL, 25μg / mL, 26μg / mL, 27μg / mL, 28μg / mL, 29μg / mL, 30μg / mL, 31μg / mL, 32μg / mL, 33μg / mL, 34μg / mL, 35μg / mL, 36 It may be μg / mL, 37 μg / mL, 38 μg / mL, 39 μg / mL, 40 μg / mL, 41 μg / mL, 42 μg / mL, 43 μg / mL, 44 μg / mL, 45 μg / mL, 46 μg / mL, 47 μg / mL, 48 μg / mL, 49 μg / mL or more.In some embodiments, the upper boundary is at least about 50 μg / mL, 45 μg / mL, 40 μg / mL, 35 μg / mL, 30 μg / mL, 25 μg / mL, 20 μg / mL, 19 μg / mL, 18 μg / mL, 17 μg / mL, 16 μg / mL, 15 μg / mL, 14 μg / mL, 13 μg / mL, 12 μg / mL, 11 μg / mL, 10 μg / mL, 9 μg / mL, 8 μg / mL, 7 μg / mL, 6 μg / mL, 5 μg / mL, 4.5 μg / mL, 4 μg / mL, L, 3.5μg / mL, 3μg / mL, 2.5μg / mL, 2μg / mL, 1.9μg / mL, 1.8μg / mL, 1.7μg / mL, 1.6μg / mL, 1.5μg / mL, 1.4μg / mL, 1.3μg / mL, 1.2μg / mL , 1.1 μg / mL, 1.0 μg / mL, 0.9 μg / mL, 0.8 μg / mL, 0.7 μg / mL, 0.6 μg / mL, 0.5 μg / mL, 0.4 μg / mL, 0.3 μg / mL, 0.2 μg / mL or less. In some embodiments, a "normal" level of iC3b is in the range of 0.2 μg / mL to 50 μg / mL, in other embodiments, a "normal" level of iC3b is in the range of 0.5 μg / mL to 40 μg / mL, in other embodiments, a "normal" level of iC3b is in the range of 1 μg / mL to 35 μg / mL, in other embodiments, a "normal" level of iC3b is in the range of 5 μg / mL to 30 μg / mL, in other embodiments, a "normal" level of iC3b is in the range of 7.5 μg / mL to 25 μg / mL, in other embodiments, a "normal" level of iC3b is in the range of 10 μg / mL to 20 μg / mL, and in other embodiments, a "normal" level of iC3b is in the range of 12.5 μg / mL to 17.5 μg / mL.
[0148] In some embodiments, iC3b is detected using a non-cross-reactive binder, such as an antibody, characterized in that a 1 μg / μl solution of intact C3 produces a signal equivalent to less than about 1 ng / mL of iC3b, hi some embodiments, the non-cross-reactive antibody is selected from the group consisting of A209, MCA2607, and HM2199.
[0149] C4 Like C3, complement component C4 is one of the most commonly measured complement proteins and is known to play a role in immunity (including autoimmunity) and tolerance. C4 is involved in all three complement pathways (i.e., classical, alternative, and lectin). As known to those skilled in the art, in some circumstances, C4 is cleaved (e.g., by C1) into C4a and C4b, with C4b being of higher molecular weight than C4a. In some embodiments, C4b can interact with complement protein 2 (C2), which itself can be cleaved (e.g., by C1) into two components, and in some embodiments, can include and further interact with, for example, C3.
[0150] In some embodiments, abnormal levels of intact C4 may be present in several different diseases, disorders or conditions. In some such embodiments, intact C4 levels may be increased or decreased compared to control levels. For example, in some embodiments, intact C4 levels may be elevated or increased during or after acute infection or injury (i.e., compared to control levels), while intact C4 levels may be decreased in chronic autoimmune conditions (e.g., lupus, e.g., SLE, lupus nephritis, etc.). In some embodiments, intact C4 levels are decreased due to inherited or acquired diseases, disorders, or conditions. In some such embodiments, genetic defects may result in decreased levels of C4 compared to control levels.
[0151] In some embodiments, intact C4 may be measured in a sample in the range of 0.05-1.0 mg / mL.
[0152] In some embodiments, a "normal" intact C4 level in a sample (e.g., a bodily fluid) is within a range having a lower boundary and an upper boundary that is higher than the lower boundary. In some embodiments, a "normal" intact C4 level in a sample is within the range of 0.05-1.0 mg / mL.6. The composition of the mixture is 50µg / mL, 55µg / mL, 60µg / mL, 65µg / mL 0µg / mL、75µg / mL、80µg / mL、85µg / mL、90µg / mL、95µg / mL、100µg / mL、11 0µg / mL、120µg / mL、130µg / mL、140µg / mL、150µg / mL、160µg / mL、170µg / mL、180µg / mL、190µg / mL、200µg / mL、210µg / mL、220µg / mL、230µg / mL、2 40µg / mL、250µg / mL、260µg / mL、270µg / mL、280µg / mL、290µg / mL、300µg / mL、310µg / mL、320µg / mL、330µg / mL、340µg / mL、350µg / mL、360µg / mL 370µg / mL、380µg / mL、390µg / mL、400µg / mL、410µg / mL、420µg / mL、430µ g / mL、440µg / mL、450µg / mL、460µg / mL、470µg / mL、480µ / mL、490µg / mL 500µg / mL、510µg / mL、520µg / mL、530µg / mL、540µg / mL、550µg / mL、560µ g / mL、570µg / mL、580µg / mL、590µg / mL、600µg / mL、610µg / mL、620µg / mL 、630µg / mL、640µg / mL、650µg / mL、660µg / mL、670µg / mL、680µg / mL、690 µg / mL、700µg / mL、710µg / mL、720µg / mL、730µg / mL、740µg / mL、750µg / m L、760µg / mL、770µg / mL、780µg / mL、790µg / mL、800µg / mL、810µg / mL、82 0µg / mL、830µg / mL、840µg / mL、850µg / mL、860µg / mL、870µg / mL、880µg / mL、890µg / mL、900µg / mL、910µg / mL、920µg / mL、930µg / mL、940µg / mL 50µg / mL, 960µg / mL, 970µg / mL, 980µg / mL, 990µg / mL.In some embodiments, the upper boundary may be at least about 1000 μg / mL, 950 μg / mL, 900 μg / mL, 850 μg / mL, 800 μg / mL, 750 μg / mL, 700 μg / mL, 650 μg / mL, 600 μg / mL, 550 μg / mL, 500 μg / mL, 450 μg / mL, 400 μg / mL, 350 μg / mL, 300 μg / mL, 250 μg / mL, 200 μg / mL, 150 μg / mL, 100 μg / mL, 90 μg / mL, 80 μg / mL, 70 μg / mL, 60 μg / mL, 50 μg / mL or less. In some embodiments, a "normal" level of intact C4 is in the range of 0.05-1 mg / mL, in other embodiments, a "normal" level of intact C4 is in the range of 50 μg / mL-900 μg / mL, in other embodiments, a "normal" level of intact C4 is in the range of 50 μg / mL-800 μg / mL, in other embodiments, a "normal" level of intact C4 is in the range of 50 μg / mL-700 μg / mL, in other embodiments, a "normal" level of intact C4 is in the range of 50 μg / mL-600 μg / mL, and in other embodiments, a "normal" level of intact C4 is in the range of 50 μg / mL-600 μg / mL. In some embodiments, a "normal" level of intact C4 is in the range of 50 μg / mL to 500 μg / mL, in other embodiments, a "normal" level of intact C4 is in the range of 50 μg / mL to 400 μg / mL, in other embodiments, a "normal" level of intact C4 is in the range of 50 μg / mL to 300 μg / mL, in other embodiments, a "normal" level of intact C4 is in the range of 50 μg / mL to 200 μg / mL, and in other embodiments, a "normal" level of intact C4 is in the range of 50 μg / mL to 100 μg / mL.
[0153] In some embodiments, intact C4 is detected using a non-cross-reactive binding agent, such as an antibody that recognizes intact C4 and is characterized by not cross-reacting with C4d.
[0154] C5 Complement component 5 (C5) is important in inflammatory processes as well as several other cellular processes and events. As seen in FIG. 1, C5 convertases generated by any of the three complement pathways cleave intact C5 into C5a and C5b. C5b can then bind to C6, C7, and C8, which are known to catalyze the polymerization of C9 to form the C5b-9 membrane attack complex (MAC). C5a can be pro-inflammatory, and the MAC (catalyzed by C5b) is involved in cell lysis. Thus, in some embodiments, cleavage of C5 into C5a and C5b can cause problems. For example, in some embodiments, cleavage of C5 can be involved in pathological outcomes (e.g., one or more diseases, disorders, or conditions, e.g., aHUS). Monoclonal antibody therapies (e.g., anti-C5 antibodies) that can reduce or prevent C5 cleavage are known. Complicating matters, accurately measuring the therapeutic impact of such antibodies using biomarkers has been nearly impossible prior to the techniques provided by the present disclosure. For example, the present disclosure recognizes that if a subject has been or is receiving treatment with a therapy that prevents or inhibits C5 cleavage (e.g., anti-C5 antibodies), a provider may measure the amount of free C5 in a sample (e.g., a blood sample) from a patient to titrate and / or monitor the treatment. Previously available assays to measure C5 require several serial dilutions of a liquid sample (e.g., a blood sample). Problematically, however, such dilution of the sample may result in dissociation of the therapeutic / target complex (dissociation of the anti-C5 antibodies from C5). If dissociation of the therapeutic / target complex occurs, the measurement of free C5 will be artificially elevated, and although the provider may alter the treatment the subject is receiving (e.g., increase the amount of anti-C5 antibodies) based on such measurements, in practice, the change may not be warranted. The present disclosure recognizes the source of this problem and provides a solution with technology that achieves an efficient, sensitive, accurate, specific, reliable, and / or rapid assay for measuring C5 without the need to dilute the sample as in previously available assays, thus avoiding the risk of falsely reported C5 measurements.
[0155] In some embodiments, C5 may be measured in a sample in the range of 0.001 to 1000 μg / mL.
[0156] In some embodiments, a "normal" C5 level in a sample (e.g., a bodily fluid) is within a range having a lower boundary and an upper boundary that is higher than the lower boundary. In some embodiments, a "normal" C5 level in a sample is within the range of 0.001-100 μg / mL. In some embodiments, the lower boundary is at least about 0.001 μg / mL, 0.002 μg / mL, 0.003 μg / mL, 0.004 μg / mL, 0.005 μg / mL, 0.006 μg / mL, 0.007 μg / mL, 0.008 μg / mL, 0.009 μg / mL, 0.010 μg / mL, 0.015 μg / mL, 0.02 μg / mL, 0.025 μg / mL, 0.030 μg / mL, 0.035 μg / mL, 0.040 μg / mL, 0.045 μg / mL, 0.050 μg / mL L, 0.055μg / mL, 0.060μg / mL, 0.065μg / mL, 0.070μg / mL, 0.075μg / mL, 0.080μg / mL, 0.085μg / mL, 0.090μg / mL, 0.095μg / mL, 0.10μg / m L, 0.15μg / mL, 0.2μg / mL, 0.25μg / mL, 0.3μg / mL, 0.35μg / mL, 0.4μg / mL, 0.45μg / mL, 0.5μg / mL, 0.55μg / mL, 0.60μg / mL, 0.65μg / mL, 0. 70μg / mL, 0.75μg / mL, 0.8μg / mL, 0.85μg / mL, 0.9μg / mL, 1μg / mL, 2μg / mL, 3μg / mL, 4μg / mL, 5μg / mL, 6μg / mL, 7μg / mL, 8μg / mL, 9μg / mL, 10μg / mL, 15μg / mL, 20μg / mL, 25μg / mL, 30μg / mL, 35μg / mL, 40μg / mL, 45μg / mL, 50μg / mL, 55μg / mL, 60μg / mL, 65μg / mL, 70μg / mL, 75μg / m L, 80μg / mL, 85μg / mL, 90μg / mL, 95μg / mL, 100μg / mL, 150μg / mL, 200μg / mL, 250μg / mL, 300μg / mL, 350μg / mL, 400μg / mL, 450μg / mL, 500μ g / mL, 550 μg / mL, 600 μg / mL, 650 μg / mL, 700 μg / mL, 750 μg / mL, 800 μg / mL, 850 μg / mL, 900 μg / mL, 950 μg / mL, 1000 μg / mL or more.In some embodiments, the limit is at least 1000μg / mL, 975μg / mL, 925μg / mL, 875μg / mL, 825μg / mL, 775μg / mL, 725μg / mL. mL、675μg / mL、625μg / mL、575μg / mL、525μg / mL、475μg / mL、425μg / mL、375μg / mL、325μg / mL、275μg / mL、22 5μg / mL、175μg / mL、125μg / mL、100μg / mL、95μg / mL、90μg / mL、85μg / mL、80μg / mL、75μg / mL、70μg / mL、65μ g / mL、60μg / mL、55μg / mL、50μg / mL、45μg / mL、40μg / mL、35μg / mL、30μg / mL、25μg / mL、20μg / mL、15μg / mL、1 0μg / mL、9μg / mL、8μg / mL、7μg / mL、6μg / mL、5μg / mL、4μg / mL、3μg / mL、2μg / mL、1μg / mL、0.9μg / mL、0.8μg / mL mL、0.7μg / mL、0.6μg / mL、0.5μg / mL、0.4μg / mL、0.3μg / mL、0.2μg / mL、0.1μg / mL、0.09μg / mL、0.08μg / mL、 0.07μg / mL、0.06μg / mL、0.05μg / mL、0.04μg / mL、0.03μg / mL、0.02μg / mL、0.01μg / mL、0.009μg / mL、0.008 μg / mL、0.007μg / mL、0.006μg / mL、0.005μg / mL、0.004μg / mL、0.003μg / mL、0.002μg / mL or it may be below.In some embodiments, a "normal" level of C5 is in the range of 0.001-1000 μg / mL, in other embodiments, a "normal" level of C5 is in the range of 0.001-750 μg / mL, in other embodiments, a "normal" level of C5 is in the range of 0.001-500 μg / mL, in other embodiments, a "normal" level of C5 is in the range of 0.001 μg / mL-250 μg / mL, in other embodiments, a "normal" level of C5 is in the range of 0.01 μg / mL-100 μg / mL, in other embodiments, a "normal" level of C5 is in the range of 0.05 μg / mL-50 μg / mL, in other embodiments, a "normal" level of C5 is in the range of 0.1 μg / mL-10 μg / mL, and in other embodiments, a "normal" level of C5 is in the range of 0.1 μg / mL-1 μg / mL.
[0157] In some embodiments, C5 is detected using a non-cross-reactive binding agent, such as an antibody that is characterized as not cross-reactive with C5b or C5 complexed to a therapeutic agent.
[0158] sC5b-9 After C5 activation, the terminal complement pathway cascade (TP) assembles complement components C5b, C6, C7, C8, and C9 to form the terminal complement complex, C5b-9. C5b-9 may insert into and damage cell membranes or remain in the aqueous phase where it is measurable in its soluble form, sC5b-9. In some embodiments, the level of sC5b-9 in a sample may be elevated in the context of one or more diseases, disorders, or conditions. Without being bound to any particular theory, in some embodiments, sC5b-9 in urine may be associated with a state of C5 activation (e.g., inhibition of C5 activation). In contrast to the technology provided by the present disclosure, previously available assays were unable to detect sC5b-9 below thresholds that were often too high relative to the amount of sC5b-9 present in many samples. Furthermore, measuring sC5b-9 in body fluids other than blood (e.g., urine) has been problematic because the levels of sC5b-9 in urine are often significantly lower than in blood or plasma. The low levels of sC5b-9 in urine compared to other samples such as blood or plasma often result in previously available assays reporting false negatives when measuring sC5b-9, as they are unable to reach the LLOQ achieved by the technology of the present disclosure. Thus, the technology described herein overcomes challenges associated with sC5b-9, including increasing the detection range (lower LLOQ and higher ULOQ) and improving the efficiency, sensitivity, specificity, accuracy, reliability and / or speed of sC5b-9 measurement across a variety of samples, including urine. Thus, in some embodiments, measurement of sC5b-9 in one or more samples, including urine, can be used to determine the status of C5 activation, in contrast to previously available assays.
[0159] As described herein, among other things, the present disclosure provides the insight that measuring sC5b-9 in urine requires different conditions and normalization steps than samples such as blood. Additionally, the present disclosure recognizes that urine volume can dramatically affect the measurement of sC5b-9. Thus, in some embodiments, the assays of the present disclosure also measure creatinine using the same immunoassay device as sC5b-9 to normalize the measurements to account for changes in urine volume and concentration. In some embodiments, creatinine and sC5b-9 may be measured on the same test strip. In some embodiments, creatinine and sC5b-9 may be measured on different test strips (within the same immunoassay device).
[0160] In some embodiments, sC5b-9 may be measured in a sample in the range of 0.001-1000 μg / mL. In some embodiments, sC5b-9 in blood or plasma may be measured in the range of 50-10,000 ng / mL. In some embodiments, sC5b-9 in urine may be measured in the range of 1-100,000 ng / mL. In some embodiments, if the sample is or contains urine, the level of creatinine may be measured in the range of 6.2-8000 μg / mL.
[0161] In some embodiments, a "normal" sC5b-9 level in a sample (e.g., a bodily fluid) is within a range having a lower boundary and an upper boundary that is higher than the lower boundary. In some embodiments, a "normal" sC5b-9 level in a sample is within the range of 0.001-1000 μg / mL.In some embodiments, the lower boundary is at least about 0.001 μg / mL, 0.002 μg / mL, 0.003 μg / mL, 0.004 μg / mL, 0.005 μg / mL, 0.006 μg / mL, 0.007 μg / mL, 0.008 μg / mL, 0.009 μg / mL, 0.010 μg / mL, 0.015 μg / mL, 0.02 μg / mL, 0.025 μg / mL, 0.030 μg / mL, 0.035 μg / mL, 0.040 μg / mL, 0.045 μg / mL, 0.050 μg / mL, 0.055 μg / mL, 0.060 μg / mL, 0.065 μg / mL, 0.070 μg / mL, 0.075 μg / mL, 0.080 μg / mL, 0.085 μg / mL, 0.090 μg / mL, 0.095 μg / mL, 0.10 μg / mL, 0.15 μg / mL, 0.2 μg / mL, 0.25 μg / mL, 0.3 μg / mL, 0.35 μg / mL, 0.4 μg / mL, 0.45 μg / mL, 0.5 μg / mL, 0.55 μg / mL, 0.60 μg / mL, 0.65 μg / mL, 0.70 μg / mL, 0.75 μg / mL, 0.8 μg / mL, 0.85 μg / mL, 0.9 μg / mL, 1 μg / mL, 2 μg / mL, 3 μg / mL, 4 μg / mL, 5 μg / mL, 6 μg / mL, 7 μg / mL, 8 μg / mL, 9 μg / mL, 10 μg / mL, 15 μg / mL, 20 μg / mL, 25 μg / mL, 30 μg / mL, 35 μg / mL, 40 μg / mL, 45 μg / mL, 50 μg / mL, 55 μg / mL, 60 μg / mL, 65 μg / mL, 70 μg / mL, 75 μg / mL, 80 μg / mL, 85 μg / mL, 90 μg / mL, 95 μg / mL, 100 μg / mL, 110 μg / mL, 120 μg / mL, 130 μg / mL, 140 μg / mL, 150 μg / mL, 160 μg / mL, 170 μg / mL, 180 μg / mL, 190 μg / mL, 200 μg / mL, 250 μg / mL, 300 μg / mL, 350 μg / mL, 400 μg / mL, 450 μg / mL, 500 μg / mL, 550 μg / mL, 600 μg / mL, 650 μg / mL, 700 μg / mL, 750 μg / mL, 800 μg / mL, 850 μg / mL, 900 μg / mL, 950 μg / mL or more.In some embodiments, the upper limit is at least 1000μg / mL, 950μg / mL, 900μg / mL, 850μg / mL, 800μg / mL, 750μg / mL, 700μg / mL、650μg / mL、600μg / mL、550μg / mL、500μg / mL、450μg / mL、400μg / mL、350μg / mL、300μg / mL、250μg / mL、 200μg / mL、150μg / mL、100μg / mL、90μg / mL、95μg / mL、85μg / mL、80μg / mL、75μg / mL、70μg / mL、65μg / mL、6 0μg / mL、55μg / mL、50μg / mL、45μg / mL、40μg / mL、35μg / mL、30μg / mL、25μg / mL、20μg / mL、15μg / mL、10μg / mL L、9μg / mL、8μg / mL、7μg / mL、6μg / mL、5μg / mL、4μg / mL、3μg / mL、2μg / mL、1μg / mL、0.9μg / mL、0.8μg / mL、0 .7μg / mL、0.6μg / mL、0.5μg / mL、0.4μg / mL、0.3μg / mL、0.2μg / mL、0.1μg / mL、0.09μg / mL、0.08μg / mL、0.0 7μg / mL、0.06μg / mL、0.05μg / mL、0.04μg / mL、0.03μg / mL、0.02μg / mL、0.01μg / mL、0.009μg / mL、0.008μ g / mL、0.007μg / mL、0.006μg / mL、0.005μg / mL、0.004μg / mL、0.003μg / mL、0.002μg / mL or it may be below.In some embodiments, a "normal" level of sC5b-9 is in the range of 0.001-1000 μg / mL, in other embodiments, a "normal" level of sC5b-9 is in the range of 0.001-750 μg / mL, in other embodiments, a "normal" level of sC5b-9 is in the range of 0.001-500 μg / mL, in other embodiments, a "normal" level of sC5b-9 is in the range of 0.01 μg / mL-500 μg / mL, and in other embodiments, a "normal" level of sC5b-9 is in the range of In other embodiments, "normal" levels of sC5b-9 are in the range of 0.01 μg / mL to 250 μg / mL, and in other embodiments, "normal" levels of sC5b-9 are in the range of 0.05 μg / mL to 250 μg / mL, and in other embodiments, "normal" levels of sC5b-9 are in the range of 0.1 μg / mL to 100 μg / mL, and in other embodiments, "normal" levels of sC5b-9 are in the range of 0.5 μg / mL to 50 μg / mL, and in other embodiments, "normal" levels of sC5b-9 are in the range of 1 μg / mL to 50 μg / mL.
[0162] In some embodiments, sC5b-9 is detected using a non-cross-reactive binding agent (eg, an antibody) that is characterized by not cross-reacting with C5 or C9.
[0163] IL-6 Interleukin 6 (IL-6) can act as a pro-inflammatory cytokine or an anti-inflammatory myokine depending on the situation, as will be understood by those skilled in the art. IL-6 can be secreted in response to pathogen-associated molecular patterns (PAMPS). PAMPS bind to pattern recognition receptors (PRRs) and toll-like receptors (TLRs), which are important components of the innate immune system. As is also known to those skilled in the art, IL-6 can function in the acute phase of the inflammatory response and can also be a marker of many chronic immune-mediated diseases, disorders, and conditions.
[0164] In some embodiments, IL-6 may be measured in a sample in the range of 2-5000 pg / mL.
[0165] In some embodiments, a "normal" IL-6 level in a sample (e.g., a bodily fluid) is within a range having a lower boundary and an upper boundary that is higher than the lower boundary. In some embodiments, a "normal" IL-6 level in a sample is within the range of 2-5000 pg / mL.In some embodiments, the lower boundary is at least about 2 pg / mL, 3 pg / mL, 4 pg / mL, 5 pg / mL, 6 pg / mL, 7 pg / mL, 8 pg / mL, 9 pg / mL, 10 pg / mL, 15 pg / mL, 20 pg / mL, 25 pg / mL, 30 pg / mL, 35 pg / mL, 40 pg / mL, 45 pg / mL, 50 pg / mL, 55 pg / mL, 60 pg / mL, 65 pg / mL, 70 pg / mL, 75 pg / mL, 80 pg / mL, 85 pg / mL, 90 pg / mL, 95 pg / mL, 100 pg / mL, 125 pg / mL L, 150pg / mL, 175pg / mL, 200pg / mL, 225pg / mL, 250pg / mL, 275pg / mL, 300pg / mL, 325pg / mL, 350pg / mL, 375pg / mL, 400pg / mL, 425pg / mL, 450pg / mL, 4 75pg / mL, 500pg / mL, 525pg / mL, 550pg / mL, 575pg / mL, 600pg / mL, 625pg / mL, 650pg / mL, 675pg / mL, 700pg / mL, 725pg / mL, 750pg / mL, 775pg / mL, 800pg 150 0pg / mL, 1600pg / mL, 1700pg / mL, 1800pg / mL, 1900pg / mL, 2000pg / mL, 2100pg / mL, 2200pg / mL, 2300pg / mL, 2400pg / mL, 2500pg / mL, 2600pg / mL, 270 The concentration may be 0 pg / mL, 2800 pg / mL, 2900 pg / mL, 3000 pg / mL, 3100 pg / mL, 3200 pg / mL, 3300 pg / mL, 3400 pg / mL, 3500 pg / mL, 3600 pg / mL, 3700 pg / mL, 3800 pg / mL, 3900 pg / mL, 4000 pg / mL, 4100 pg / mL, 4200 pg / mL, 4300 pg / mL, 4400 pg / mL, 4500 pg / mL, 4600 pg / mL, 4700 pg / mL, 4800 pg / mL, 4900 pg / mL or more.In some embodiments, the upper boundary is at least about 5000 pg / mL, 4900 pg / mL, 4800 pg / mL, 4700 pg / mL, 4600 pg / mL, 4500 pg / mL, 4400 pg / mL, 4300 pg / mL, 4200 pg / mL, 4100 pg / mL, 4000 pg / mL, 3900 pg / mL, 3800 pg / mL, 3700 pg / mL, 3600 pg / mL, 3500 pg / mL L, 3400pg / mL, 3300pg / mL, 3200pg / mL, 3100pg / mL, 3000pg / mL, 2900pg / mL, 2800pg / mL, 2700pg / mL, 2600pg / mL , 2500pg / mL, 2400pg / mL, 2300pg / mL, 2200pg / mL, 2100pg / mL, 2000pg / mL, 1900pg / mL, 1800pg / mL, 1700pg / mL, 1 600pg / mL, 1500pg / mL, 1400pg / mL, 1300pg / mL, 1200pg / mL, 1100pg / mL, 1000pg / mL, 950pg / mL, 900pg / mL, 850p g / mL, 800pg / mL, 750pg / mL, 700pg / mL, 650pg / mL, 600pg / mL, 550pg / mL, 500pg / mL, 450pg / mL, 400pg / mL, 350pg / mL The amount of g / mL may be 300pg / mL, 250pg / mL, 200pg / mL, 150pg / mL, 100pg / mL, 90pg / mL, 80pg / mL, 70pg / mL, 60pg / mL, 50pg / mL, 40pg / mL, 30pg / mL, 20pg / mL, 10pg / mL, 9pg / mL, 8pg / mL, 7pg / mL, 6pg / mL, 5pg / mL, 4pg / mL, 3pg / mL or less.
[0166] In some embodiments, a "normal" level of IL-6 is in the range of 2-5000 pg / mL, in other embodiments, a "normal" level of IL-6 is in the range of 2-4500 pg / mL, in other embodiments, a "normal" level of IL-6 is in the range of 2-4000 pg / mL, in other embodiments, a "normal" level of IL-6 is in the range of 2 pg / mL-3500 pg / mL, in other embodiments, a "normal" level of IL-6 is in the range of 2 pg / mL-3000 pg / mL, in other embodiments, a "normal" level of IL-6 is in the range of 2 pg / mL-2500 pg / mL, and in other embodiments, a "normal" level of IL-6 is in the range of 2 pg / mL-3000 pg / mL. In other embodiments, a "normal" level of IL-6 is in the range of 2 pg / mL-1500 pg / mL, in other embodiments, a "normal" level of IL-6 is in the range of 5 pg / mL-1000 pg / mL, in other embodiments, a "normal" level of IL-6 is in the range of 5-500 pg / mL, in other embodiments, a "normal" level of IL-6 is in the range of 5-250 pg / mL, in other embodiments, a "normal" level of IL-6 is in the range of 5-125 pg / mL, in other embodiments, a "normal" level of IL-6 is in the range of 10-100 pg / mL, and in other embodiments, a "normal" level of IL-6 is in the range of 25-75 pg / mL.
[0167] In some embodiments, IL-6 is detected using a non-cross-reactive binding agent (eg, an antibody).
[0168] ADAMTS13 A disintegrin and metalloproteinase with thrombospondin-1 motif 13 family member (ADAMTS13) is an enzyme that cleaves von Willebrand factor (VWF), a protein involved in blood clotting. Inherited or acquired deficiencies in plasma ADAMTS13 are associated with one or more diseases, disorders, or conditions. In some embodiments, ADAMTS13 deficiency causes TTP. Timely and accurate diagnosis of TTP is very important because TTP can present with similar symptoms to other diseases, such as aHUS, each of which has a different treatment. It is therefore important to have an assay that can rapidly, sensitively, and specifically distinguish TTP from another disease, such as aHUS, because treatment for a subject in need of it may vary greatly depending on the diagnosis.
[0169] ADAMTS13 levels can be measured as a percentage of activity by combining a sample with a substrate containing the peptide, and then assaying for the percentage of cleaved peptide. Previously available assays were burdened with extensive steps, such as many serial dilutions and long periods of time to completion (e.g., as in a standard ELISA assay). For example, the fastest previously available assays take a minimum of 1-3 hours. In addition, these assays can only measure a single target (e.g., ADAMTS13). In contrast, the present disclosure provides techniques that significantly improve (e.g., reduce) the amount of time required to achieve a result. That is, in some embodiments, the present disclosure provides methods and assays that provide results within 35 minutes of obtaining a sample. As will be appreciated by those skilled in the art, this is a significant improvement, making this important assay highly suitable for point-of-care formats. Furthermore, in some embodiments, after the sample is contacted with the substrate, one or more targets in the sample / substrate mixture can be measured using the immunoassay device of the present disclosure. In some such embodiments, the present disclosure provides techniques that not only allow for the measurement of the percent activity of ADAMTS13, but also multiplex with one or more other targets that are measured simultaneously on the same immunoassay device as ADAMTS13 is measured. The reduced time to result and multiplexing of ADAMTS13 measurement with one or more other targets represents a significant improvement in the functional utility of this assay compared to previously available assays.
[0170] In some embodiments, ADAMTS13 may be measured in a sample in the range of 10 to less than 100% activity (as measured by the amount of substrate cleavage).
[0171] In some embodiments, the level of ADAMTS13 activity is 10% or less. In some embodiments, the level of ADAMTS13 activity is within a range, the lower boundary of which is at least about 10, 15, 20, 25, 30, 35, 40, 45, 50, 55, 60, 65, 70, 75, 80, 85, 90, 95% or more. In some embodiments, the level of ADAMTS13 activity has an upper boundary of at least about 100%, 99%, 98%, 97%, 96%, 95%, 94%, 93%, 92%, 91%, 90%, 89%, 88%, 87%, 86%, 85%, 84%, 83%, 82%, 81%, 80%, 79%, 78%, 77%, 76%, 75%, 74%, 73%, 72%, 71%, 70%, 69%, 68%, 67%, 66%, 65%, 64%, 63%, 62%, 61%, 60%, 62%, 63%, 64%, 65%, 66%, 67%, 68%, 69%, 69%, 68%, 67%, 68%, 68%, 69 ... 9%, 58%, 57%, 56%, 55%, 54%, 53%, 52%, 51%, 50%, 49%, 48%, 47%, 46%, 45%, 44%, 43%, 42%, 41%, 40%, 39%, 38%, 37%, 36%, 35%, 34%, 33%, 32%, 31%, 30%, 29%, 28%, 27%, 26%, 25%, 24%, 23%, 22%, 21%, 20%, 19%, 18%, 17%, 16%, 15%, 14%, 13%, 12%, and 11% or less.
[0172] In some embodiments, ADAMTS13 is detected using a recombinant VWF substrate.
[0173] In some embodiments, non-cross-reactive antibodies that recognize only cleaved VWF fragments are used for detection.
[0174] Ba Ba is a cleavage product of the alternative complement pathway. In some cases, cleavage of the thioester bond in C3 by a water molecule forms C3(H2O), which binds to factor B and then allows factor D to cleave factor B into Ba and Bb. Bb remains associated with C3(H2O) to form a C3(H2O)Bb complex, which functions as a C3 convertase, cleaving C3 to yield C3a and C3b. Ba has been found to reduce lymphocyte activity (e.g., proliferation).
[0175] In some embodiments, Ba may be measured in a sample in the range of 0.5 to 20 μg / mL.
[0176] In some embodiments, a "normal" Ba level in a sample (e.g., a bodily fluid) is within a range having a lower boundary and an upper boundary that is higher than the lower boundary. In some embodiments, a "normal" Ba level in a sample is within a range of 0.5-20 μg / mL. In some embodiments, the lower boundary may be at least about 0.5 μg / mL, 0.6 μg / mL, 0.7 μg / mL, 0.8 μg / mL, 0.9 μg / mL, 1 μg / mL, 2 μg / mL, 3 μg / mL, 4 μg / mL, 5 μg / mL, 6 μg / mL, 7 μg / mL, 8 μg / mL, 9 μg / mL, 10 μg / mL, 11 μg / mL, 12 μg / mL, 13 μg / mL, 14 μg / mL, 15 μg / mL, 16 μg / mL, 17 μg / mL, 18 μg / mL, 19 μg / mL or more. In some embodiments, the upper boundary is at least about 20 μg / mL, 19 μg / mL, 18 μg / mL, 17 μg / mL, 16 μg / mL, 15 μg / mL, 14 μg / mL, 13 μg / mL, 12 μg / mL, 11 μg / mL, 10 μg / mL, 9 μg / mL, 8 μg / mL, 7 μg / mL, 6 μg / mL, 5 μg / mL, 4.5 μg / mL, 4 μg / mL, 3.5 μg / mL, 5 μg / mL, 6 μg / mL, 7 μg / mL, 8 μg / mL, 9 μg / mL, 9 μg / mL, 10 ... The amount of the compound may be 0.1 μg / mL, 3 μg / mL, 2.5 μg / mL, 2 μg / mL, 1.9 μg / mL, 1.8 μg / mL, 1.7 μg / mL, 1.6 μg / mL, 1.5 μg / mL, 1.4 μg / mL, 1.3 μg / mL, 1.2 μg / mL, 1.1 μg / mL, 1.0 μg / mL, 0.9 μg / mL, 0.8 μg / mL, 0.7 μg / mL, 0.6 μg / mL or less. In some embodiments, a "normal" level of Ba is in the range of 0.5 μg / mL to 20 μg / mL, in other embodiments, a "normal" level of Ba is in the range of 0.5 μg / mL to 15 μg / mL, in other embodiments, a "normal" level of Ba is in the range of 1 μg / mL to 10 μg / mL, and in other embodiments, a "normal" level of Ba is in the range of 5 μg / mL to 7.5 μg / mL.
[0177] In some embodiments, Ba is detected using a non-cross-reactive binding agent that does not cross-react with B or Bb.
[0178] Other immune targets In some embodiments, one or more additional targets are measured. As a non-limiting example, in some embodiments, the one or more targets may include the MASP2:AT complex. The superfamily of serine protease inhibitors (serpins), namely C1 inhibitor (C1-INH) and antithrombin (AT), regulate MASP-2 activity by forming stable complexes with activated MASP-2. Thus, MASP-2 activation can be assessed by measuring the complex between MASP-2 and its regulatory serpins. MASP-2 activation is preferentially regulated by C1-INH when triggered by lectin pathway pattern recognition molecules. However, AT is the primary regulator of MASP-2 activation in the presence of clotted blood. MASP / serpin complexes in SLE correlate with platelet activation parameters. Similar to MASPs, the contact protease FXII is activated by fibrin clots and regulated by AT and C1-INH. Increased FXIIa / AT and decreased FXIIa / C1-INH have been shown to significantly increase the likelihood of vascular disease in SLE. AT complex formation is highly correlated with thrombotic responses. Complement is activated by non-biological surfaces such as ventilators. C4 / C4BP and FXII / C1-INH, which are absorbed to non-biological surfaces, have been shown to correlate with pro-inflammatory cytokine production. Conversely, the complement activation fragments C3a, C5a, and C5b-9 have poor predictive value as biocompatibility markers.
[0179] In some embodiments, the one or more additional targets measured include C4d, Ba, Bb, FH, CXCL9, sCD25, microRNA, IL8, pentraxin 3, IL1, VCAM1, thrombomodulin, ferritin, CRP, IL-10, TNFα, IFNγ, and / or creatinine. As known to those skilled in the art, one or more diseases, disorders, or conditions, or the risk thereof, may be characterized by the presence, absence, increase, and / or decrease in the measurement of one or more targets. For example, in some embodiments, one or more targets listed in Table 1 may be combined into one or more panels of targets measured from a sample. Whether or not one or more targets are known to be targets of interest in a particular disease, disorder, or condition (e.g., in assessing risk or diagnosis), the present disclosure provides techniques that can not only measure one or more targets, but also improve efficiency, accuracy, specificity, sensitivity, reliability, and / or speed compared to previously available assays. Importantly, the techniques of the present disclosure also improve the latency between obtaining a sample for measurement and receiving the measurement.
[0180] [Table 1]
[0181] In some embodiments, one or more targets from Table 1 may be measured from one or more samples from a single patient. In some embodiments, one or more targets may be measured on the same immunoassay device. In some embodiments, one or more targets may be measured on the same or different test strips within a given immunoassay device. In some embodiments, one or more targets may be measured on different immunoassay devices, depending on the context and targets.
[0182] panel In some embodiments, one or more combinations of targets may be combined to generate a panel. In some such embodiments, such panels are reflected in the technology provided herein. For example, in some embodiments, a panel includes targets that can be measured using a single cassette or multiple cassettes, each cassette including an immunoassay device as provided herein. For example, in some embodiments, the targets in a panel will all be on a single cassette (i.e., all targets will be measured on test strips in a single test cassette). As will be appreciated by those skilled in the art, targets may be measured using a single immunoassay device in combination with capture agents provided on one or more test strips and test lines, within the limits of chemical compatibility of all components of the particular immunoassay device and its components (e.g., capture agents and detection agents, etc.).
[0183] In some embodiments, the panel may include one or more of C3, C3a, iC3b, C4, C5, sC5b-9, IL-6, ADAMTS13, MASP2:AT complex, C4d, Ba, Bb, FH, CXCL9, sCD25, microRNA, IL8, pentraxin 3, IL1, VCAM1, thrombomodulin, ferritin, CRP, IL-10, TNFα, IFNγ, and / or creatinine.
[0184] In some embodiments, the panel may be or include Ba and sC5b-9, with or without creatinine. In some embodiments, the panel may include C3 and iC3b. In some embodiments, the panel may include C3 and C3a. In some embodiments, the panel may include sC5b-9 and ADAMTS13. In some embodiments, the panel may be or include sC5b-9, with or without creatinine. In some embodiments, the panel may be or include IL6, with or without CRP. In some embodiments, the panel may be or include C3, iC3b and / or IL6, and optionally CRP. In some embodiments, the panel may be or include iC3b, C3, and C4. In some embodiments, the panel may be or include C3, C3a, and optionally iC3b, sC5b-9, C5, C4, C4d, IL-6, and / or IL-1. In some embodiments, the panel may be or include C3, C3a, iC3b, sC5b-9, C5, C4, C4d, IL-6, and / or IL-1. In some embodiments, the panel may be or include iC3b, Ba, sC5b-9, and optionally creatinine or CRP. In some embodiments, the panel may be or include sC5b-9, ADAMTS13 activity, iC3b, C3, C4, C4d, Ba, and / or free C5, and in some such embodiments, C5 may be measured in a sample that includes an anti-C5 therapeutic. In some embodiments, the panel may be or include sC5b-9, ADAMTS13, C3, C4, C4d, Ba, IL-8, and optionally IL-6, iC3b, and / or free C5.In some embodiments, if the sample is a urine sample or iC3b, sC5b-9, C4, C4d, intact C3, and / or IL-6, and optionally free C5 (i.e., the patient is on anti-C5 treatment), the panel may be or include iC3b, sC5b-9, intact C3, and / or IL-6, and creatinine. In some embodiments, the panel may be or include IL-6, IL-1, C5a, iC3b, CXCL9, sC5b-9, sCD25, ferritin, and / or MASP2:AT. In some embodiments, the panel may be or include IL-6, IL-1, C5a, iC3b, CXCL9, sCD25, ferritin, sC5b-9, and / or MASP2:AT.
[0185] sample The techniques of the present disclosure may be used to analyze any of a variety of samples. For example, one or more targets may be measured in one or more samples as described herein. In some embodiments, the sample is a biological sample. In some embodiments, such biological samples are obtained or derived from a source of interest as described herein. In some such embodiments, such sources may be commercially available sources. In some embodiments, the source of interest includes an organism such as an animal or human. In some embodiments, the sample includes one or more targets. In some such embodiments, the sample including such targets is measured using the techniques of the present disclosure. In some embodiments, the measurement of the sample reveals that the sample does not include one or more targets. That is, in some embodiments, the level of the target may be at or below the LLOQ for that target that is zero.
[0186] In some embodiments, the biological sample is a liquid sample. In some embodiments, the biological sample is or comprises a biological tissue or fluid. In some embodiments, the sample is or comprises a liquid. In some such embodiments, the liquid is, comprises, or is derived from one or more bodily fluids. In some embodiments, the sample is or comprises a bodily fluid selected from the group consisting of whole blood, serum, plasma, urine, tears, saliva, stool, wound exudate, pus, nasal secretions, bronchoalveolar lavage fluid, mucus secretions, sebum, sweat, semen, vaginal fluid, breast milk, exhaled breath condensate, and cerebrospinal fluid.
[0187] In some embodiments, the measurements of a given target may vary by one or more orders of magnitude depending on the particular sample. For example, as a non-limiting example, in some embodiments, a "normal" level of C3 in blood may be about 0.05-5 mg / mL, while a "normal" level of C3 in cerebrospinal fluid may be about 0.025-0.1 mg / mL. In some embodiments, a "normal" level of Ba in plasma may be about 0.7-1.3 μg / mL, while a "normal" level of Ba in urine may be about 1-29 ng / mL. As will be appreciated by those skilled in the art, in a given situation, the level of a particular target in one sample containing a first fluid may be at least 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, or more orders of magnitude higher or lower than that in a second sample containing a second fluid, where the second fluid is not the same as the first fluid.
[0188] In some embodiments, the sample is or includes a solution, such as, for example, a buffer to which a target has been added. For example, in some such embodiments, the sample is or includes a buffer to which a target has been added for the purpose of testing one or more assays or developing one or more reference ranges or control conditions for the target. In some embodiments, the sample is not solid or is not substantially composed of solid materials. In some embodiments, the liquid sample is or includes cells or tissues that are collected, suspended, mixed, or otherwise contacted with a liquid (e.g., a swab placed in a buffer). In some embodiments, the liquid or fluid sample or a portion thereof is concentrated after collection (e.g., a urine sample).
[0189] In some embodiments, the biological sample may be or include bone marrow; blood (e.g., whole blood); blood cells; ascites; tissue or fine needle biopsy samples; cell-containing bodily fluids; free floating nucleic acids; serum; plasma; sebaceous secretions (e.g., sebum, e.g., smegma), semen; milk; exhaled breath condensate; sputum; saliva; urine; cerebrospinal fluid; ocular fluids (e.g., vitreous humor); peritoneal fluid; pleural fluid; feces; lymph; gynecological fluids (e.g., vaginal fluid); wound exudate; pus; skin swabs; vaginal swabs; oral swabs; nasal swabs; washings or lavage fluids, such as ductal washings or bronchoalveolar lavage; aspirates; scrapings; bone marrow specimens; synovial fluid; tissue biopsy specimens; surgical specimens; feces, other bodily fluids, secretions, and / or excretions, such as sweat and tears; and / or cells derived therefrom, etc. In some embodiments, the biological sample is or includes cells obtained from an individual. In some embodiments, the obtained cells are or comprise cells from the individual from whom the sample was obtained.
[0190] In some embodiments, a sample is a "primary sample" obtained directly from a source of interest by any suitable means. For example, in some embodiments, a primary biological sample is obtained by a method including biopsy (e.g., fine needle aspiration), surgery, and / or collection of bodily fluids (e.g., blood, lymph, urine, etc.). In some embodiments, a primary sample is a crude sample. In some such embodiments, a crude sample is substantially unprocessed. For example, in some embodiments, a sample may be collected, an aliquot of the sample may be taken directly from a collection vehicle, and applied to a test strip of the present disclosure (e.g., urine, e.g., whole blood, e.g., tears, e.g., cerebrospinal fluid, etc.). In some embodiments, as will be clear from the context, the term "sample" refers to a preparation obtained by processing (e.g., pre-treating, e.g., by removing one or more components and / or by adding one or more agents) a primary sample, i.e., a "processed sample". For example, in some embodiments, a processed sample may be a sample that has been filtered using a semi-permeable membrane.
[0191] In some embodiments, the sample requires different conditions for the measurement of a given target than for the measurement of the same target from a different type of sample. For example, in some embodiments, measuring a target in blood and measuring the same target in urine may require different conditions. As a non-limiting example, among others, the present disclosure provides the insight that measuring a target in a sample including urine may require different conditions and normalization procedures compared to measuring the same target in a sample including blood, in some embodiments. As described herein, the disclosed technology provides a solution to this problem, and when performed under the appropriate conditions, given the appropriate circumstances, a target can be measured in any liquid sample.
[0192] Without being bound to any particular theory, the present disclosure contemplates that, in some embodiments, one or more targets may be measured in urine with improved efficiency, sensitivity, accuracy, specificity, reliability, and / or speed, in contrast to previously available assays. For example, in some embodiments, sC5b-9 is an exemplary target that requires different conditions when measured in samples including blood and samples including urine. That is, in some embodiments, sC5b-9 may be a low abundance target in urine (but not, for example, blood). Thus, due to the low abundance nature of this target, previously available sC5b-9 assays were unable to accurately measure (or even detect) sC5b-9 in urine. Thus, previously available assays often erroneously reported the absence of this target due to insufficient LLOQ.
[0193] As described herein, the present disclosure recognizes that in some embodiments, factors such as the pH of the sample must be adjusted to account for the sample composition. In some such embodiments, the buffer and pH range will depend on the context and sample composition (e.g., blood, plasma, urine, tears, etc.) and will be understood by one of skill in the art. For example, in some embodiments, the pH of a sample containing urine may require different buffer conditions and pH ranges than for use with samples containing blood or plasma. Thus, in some such embodiments, the sample pad of the present disclosure includes a buffer appropriate for the sample to be measured on the test strip. For example, in some embodiments, the sample pad includes a buffer appropriate for a urine-compatible pH range. In some embodiments, certain samples may require additional filtration or separation steps before being measured on the test strip. For example, in some embodiments, the measurement of a sample containing whole blood requires the removal of red blood cells before contacting the test strip. In some such embodiments, the filter pad includes a method for removing red blood cells (e.g., anti-RBC antibodies) from the sample before the sample contacts and transfers to the test strip.
[0194] The present disclosure also recognizes that sample volume may affect the measurement of one or more targets. For example, in some embodiments, variable urine concentration may dramatically affect the measurement of sC5b-9. Thus, in some embodiments, the techniques of the present disclosure provide a means for measuring targets that are used to normalize samples. By way of non-limiting disclosure, in some embodiments, when sC5b-9 is measured from a sample that includes urine, creatinine is also measured. As will be appreciated by those skilled in the art, this advance in multiplexing and the ability to efficiently, accurately, sensitively, specifically, reliably, and / or rapidly measure at least two targets allows for sample normalization, for example, to account for differences in volume and concentration. For example, when measuring sC5b-9 in urine, the ability to multiplex and measure both sC5b-9 and creatinine allows creatinine to be used to normalize results obtained from an sC5b-9 assay, thus allowing accurate measurements of sC5b-9 to be measured.
[0195] The present disclosure provides insight that, in some embodiments, intentionally diluting a sample, as performed in a standard ELISA, can result in inaccurate measurements. That is, in some embodiments, diluting a sample (e.g., diluting the sample substantially, diluting the sample altogether, e.g., diluting the sample before applying it to a test strip, immunoassay device, and / or test cartridge as described herein) can be problematic for accurately measuring a target. For example, the present disclosure recognizes that, in some embodiments, dilution can separate the target from the therapeutic agent and thus provide an erroneous measurement of the amount of the target in the sample due to post-collection events. As a non-limiting example, in some embodiments, one or more targets may be measured in one or more samples from a subject for the purpose of monitoring the response to an administered therapeutic agent. For example, in some embodiments, an individual may be administered a therapeutic agent that binds to a particular target (e.g., an anti-C5 antibody, an anti-C3 antibody). In some such embodiments, measurement of unbound or uncomplexed "free" target may be used to determine whether a change in treatment is required, such as an increase or decrease in the dose of the therapeutic agent. As described herein, previously available assays generally require several serial dilutions to accurately measure the target, and some therapeutic / target complexes are particularly vulnerable to dissociation upon dilution. This vulnerability can cause previously available assays to inaccurately report levels of the target due to dissociation of the target from the complex, and in some embodiments, can cause providers to change the therapy when no change is actually required.
[0196] Furthermore, in some embodiments, certain samples may be vulnerable to alterations after collection and before measurement due to the sensitivity of one or more targets being measured. For example, in some embodiments, measurements of iC3b may be falsely elevated if the sample is extensively handled prior to measurement. In some embodiments, diluting the sample may increase the time required to process the sample and therefore increase the time to outcome and treatment for subjects in need thereof. In some embodiments, diluting the sample may introduce additional sources of error. In some embodiments, diluting the sample may require additional resources (e.g., equipment, personnel, etc.) that may impact resources to perform measurements and treat subjects in need thereof. The present disclosure provides techniques that use samples that have not been subjected to such extensive pre-processing, such as several serial dilutions or repeated pipetting, and instead are maintained substantially pure (e.g., undiluted, unseparated, minimally diluted, no offline dilution, separation, or purification events, etc.). In some such embodiments, the substantially pure sample is measured as provided herein without further manipulation. For example, in some embodiments, a substantially pure sample is placed in contact with a test cartridge of the present disclosure and measured within a specified period of time after collection, without significant intervening steps.
[0197] Thus, in some embodiments, the present disclosure provides techniques to improve methods of measuring one or more targets and / or monitoring one or more therapeutic agents by overcoming challenges associated with measurements including dilution induced dissociation and latency and / or processing between sample collection and measurement.
[0198] In some embodiments, a sample is obtained and applied to a test cartridge in less than 60 minutes (e.g., less than 50, 40, 30, 20, 10 minutes) after obtaining the sample. Upon contact with the test cartridge, the sample interacts with one or more components, such as a sample pad, conjugate pad, test strip, test line, capture agent, competitor, or detection agent, within approximately 6-10 seconds and takes approximately 60-90 seconds to migrate completely across the length of the test strip. Thus, in some such embodiments, the techniques of the present disclosure solve the problems of previously available assays by eliminating the need for significant sample dilution to measure targets in a sample.
[0199] In some embodiments, the sample is obtained and processed immediately. In some embodiments, the sample is obtained and stored prior to measurement. In some embodiments, the sample is collected and divided into two or more portions. In some such embodiments, at least one portion of the sample is processed immediately (e.g., within 30 minutes of obtaining). In some embodiments, at least a portion of the sample is pre-treated (e.g., contacted with an agent for at least 5 minutes) and then measured immediately (e.g., within 30 minutes). In some such embodiments, at least a portion of the sample is set aside (e.g., stored for later analysis, banking, etc.). In some embodiments, the sample is processed within 60 minutes of obtaining. In some embodiments, the sample is processed within 30 minutes of obtaining. In some embodiments, the sample is cooled (e.g., kept on ice) for up to 5 hours after obtaining (e.g., collected or thawed). In some embodiments, the sample may be divided into a portion of the sample that is measured immediately and a portion that is set aside and stored (e.g., frozen, etc.).
[0200] In some embodiments, the sample is applied to the immunoassay device of the test cassette (e.g., via a sample port). In some embodiments, the sample is applied to the immunoassay device as soon as possible after the sample is acquired. In some embodiments, the sample is applied within 30 minutes, but no more than 5 hours, of being acquired. In some embodiments, if the sample is applied to the immunoassay device more than approximately 30 minutes after being acquired, the sample is kept under refrigerated conditions (e.g., on ice). In some embodiments, the time the sample is left at ambient temperature is minimized as much as possible (e.g., to ensure reproducibility and accuracy of the measurement). In some embodiments, if a test is not available for the freshly acquired sample, the sample may be measured after storage if sample handling is optimized before and during storage. For example, such optimization may include, but is not limited to, a minimum time at room temperature, rapid processing of the sample (e.g., to plasma when the sample comprises whole blood), and transport to storage (-80C) until ready to be evaluated with the assays disclosed herein. In some embodiments, previously frozen samples should be measured immediately after thawing.
[0201] In some embodiments, the sample may contain a concentration of a low abundance target such that the lower limit of quantification is still too large (i.e., false negative results / inaccurate measurement results). Thus, in some embodiments, this is done with a sample containing a low abundance target benefit from an assay that does not require dilution or washing steps that may result in loss of material (e.g., sample material, e.g., target) to provide an efficient, accurate, sensitive, specific, reliable, and / or rapid measurement. In some such embodiments, the assay may require additional correction factors. For example, in some embodiments, the target is sC5b-9 and the sample is urine. In some embodiments, sC5b-9 is a low abundance target in urine. Thus, in some such embodiments, the assay that measures sC5b-9 is further optimized (e.g., buffer composition, e.g., pH) to accurately measure such targets in urine, unlike previously available assays that measure creatinine and are not optimized or normalized for sample type. In some embodiments, such assay improvements avoid inaccurate measurements, including but not limited to false negatives, of a given target.
[0202] The present disclosure recognizes that measuring a sample containing one or more high abundance targets can be problematic due to limitations in the quantification range. For example, measuring a particular target (e.g., C5, C3) using a previously available assay may not be able to produce results that distinguish measurements above a certain level. Thus, in some embodiments, a sample may contain an amount of a target present at such high abundance that it exceeds the upper limit of quantification (ULOQ) of the assay. For example, a high abundance target may saturate the detection agent such that accurate measurement is not possible within the range measured by the assay. In addition, a complicating factor for samples containing at least one high abundance target is that previously available assays addressed the concentration challenge using several serial dilutions. As described herein, diluting a particular sample, including samples that may generally have a high abundance target such as C5 or C3, may also dissociate the target from the therapeutic agent in a sample that contains a complex of the target and the therapeutic agent (e.g., anti-C5, anti-C3, etc.).
[0203] Thus, the present disclosure provides a solution to this problem. Importantly, these solutions do not include the use of off-line dilution, as described herein, which risks dissociation of the target. Thus, in some embodiments, the technology of the present disclosure provides assays and devices that use one or more test lines to functionally dilute the sample as it moves along the test strip. That is, in some embodiments, the test lines contain an agent, such as a capture agent, that captures an amount of the target to effectively perform in-line dilution and reduces an amount of the target so that additional test lines on the test strip can be used to quantify the target within a detectable range. For example, as a non-limiting example, the test strip is contacted by a sample containing at least one high abundance target. As the target enters and moves through the test strip, it is contacted by a first test line containing a capture agent, and a portion of the target is retained on the test line by the capture agent, while the remainder of the sample continues to move through the strip toward one or more additional test lines. In some embodiments, the second test line may contain the same capture agent to remove an additional portion of the target from the sample. In some such embodiments, such assays are performed and high abundance targets are measured without the need to perform any steps (e.g., offline dilution) to bring the amount of target in the sample within the range that the assay can measure.
[0204] The present disclosure also provides advantages for clinical trials. For example, since no significant dilution or several serial dilutions are required, nor are repeated runs of various replicates, as with previously available assays, the results can remain "blinded" to the investigator performing the assay. That is, with some previously available assays, especially under conditions with high abundance targets, the investigator may have encountered a situation where the sample was not sufficiently diluted to fall within the range of the assay and would need to rerun the assay with additional dilutions, effectively unblinding the test and the sample by showing that a particular sample has a particularly high concentration of a particular target. The technology of the present disclosure overcomes this challenge.
[0205] Pretreatment In some embodiments, the sample may be pre-treated. In some embodiments, the pre-treatment may be or may include off-line dilution and / or in-line dilution, i.e., in some embodiments, the sample may be combined with another agent (e.g., a substrate) prior to measuring one or more targets in the sample. Such processed samples may include substantially undisturbed material, such as, for example, those that have not been treated to specifically remove or expose nucleic acids or purified materials such as proteins or mRNA, except where any component(s) have been removed in one or more processing steps.
[0206] As will be appreciated by those of skill in the art, in some embodiments, pretreatment (e.g., by dilution) may be desirable or required in a given situation if the sample is or contains a high concentration target. In some embodiments, pretreatment may be desirable or required if the sample is or contains a level of viscosity that may be incompatible with any of the components of the technology provided herein. In some embodiments, pretreatment may be desirable or required when measuring the activity of a target, such as, for example, ADAMTS13, which is measured in percent activity (e.g., does not measure a specific concentration or amount). In some embodiments, the sample may be pretreated to be compatible with one or more steps of the technology (e.g., assays) provided herein. In some embodiments, the sample may be pretreated by performing one or more steps to "activate" the sample, such as to evaluate the activity of a target, such as a complement regulator. For example, in some embodiments, the sample may be pretreated by offline addition of a buffer or sample stabilizer, for example, to stabilize the sample or to change the pH of the sample. In some embodiments, such steps may occur in-line (e.g., in the pad before contacting the test strip). Activity can also be applied to activate samples and assess complement regulator activity, among other utilities.
[0207] In some embodiments, an optional pretreatment step may be performed. That is, in some embodiments, the sample may be pretreated by performing one or more steps that modify the sample in some way after obtaining the sample and prior to the measurement of one or more targets. In some embodiments, the sample may be pretreated if the measurement of one or more targets is expected to be high enough not to fall within the range measurable by the assay. In some embodiments, the pretreatment step includes contacting the sample with a liquid. In some embodiments, the liquid may be a buffer or other suitable agent for mixing with the sample. In some embodiments, mixing the sample with the liquid dilutes the sample. In some embodiments, the liquid includes at least one agent, and the liquid includes and the agent is mixed with the sample. In some embodiments, the agent is a substrate. For example, in some embodiments, the agent is a substrate that reacts with a particular target if the target is present in the sample.
[0208] In some embodiments, the target is present in the sample and the agent is modified. In some embodiments, the target is not present or is not present in a sufficient concentration to cause any modification of the substrate. In some embodiments, the sample is mixed with a liquid that optionally contains an agent, and the mixture is allowed to stand (e.g., react) for a period of time. In some embodiments, the period is 1, 2, 3, 4, 5, 6, 7, 8, 9, or 10 minutes. In some embodiments, the sample is mixed with a liquid that contains an agent and allowed to stand for a period of time, after which the sample (or a portion thereof) is applied to a test strip. For example, in some such embodiments, the sample is applied to a port in a test cassette, and the sample contacts a sample and / or conjugate pad before contacting the test strip.
[0209] In some embodiments, the sample is pretreated by separation. In some such embodiments, separation may be or may include centrifugation of the sample. For example, in some embodiments, a sample including whole blood may be obtained and processed to separate components (e.g., red blood cells, plasma, serum). In some such embodiments, several types of samples may be obtained, optionally measured, set aside for later measurement, or discarded. As described herein, a sample is not considered pretreated if it is altered after application to a test cassette, such as application to a sample pad that includes a means for removing red blood cells, as described herein. That is, in some embodiments, a sample is considered not pretreated if something is removed from the sample after contacting a component of the immunoassay device or test cassette. For example, contacting a sample with a sample pad that includes anti-red blood cell antibodies and / or a filter before the sample enters the test strip is not considered pretreatment. However, in some embodiments, after the pretreatment step, it may be optional to contact the sample with a sample pad that includes an agent that also removes a portion of the sample (e.g., red blood cells using anti-RBC antibodies, etc.).
[0210] In some embodiments, the pretreatment step is or includes a dilution step. In some such embodiments, the dilution is performed with one or more components. For example, in some embodiments, the dilution may be performed using a sample buffer. In some embodiments, the dilution step includes the addition of an agent. In some such embodiments, the agent is or includes a substrate. For example, in some embodiments, the dilution is performed using a liquid that is or includes a substrate that can be modified by one or more targets in the sample. For example, in some embodiments, the substrate is an enzyme and the modification is cleavage. In some embodiments, the dilution may be performed using a combination of a sample buffer and a substrate. As described herein, in some embodiments, the sample may be combined with a solution that includes an agent (e.g., a substrate), and the combination may be allowed to stand for a period of time before contacting the immunoassay device or a test strip therein. In some such embodiments, when the sample is "pretreated," the sample is then applied to the immunoassay device for measurement of one or more targets.
[0211] In some embodiments, the pretreatment may be performed offline. In some embodiments, the pretreatment may be performed in-line. In some embodiments, when the pretreatment is dilution and the dilution is offline dilution, the sample is diluted after it is obtained and before contacting the test strip (e.g., of an immunoassay device). As will be understood by those skilled in the art, when referring to previously available assays, dilution generally refers to offline dilution in which a sample is collected and then liquid is added to the sample at predetermined and measured intervals to generate one or more diluted samples (e.g., 1, 1:10, 1:20, 1:50, 1:100, 1:1000, etc.). In some such embodiments, one or more targets are measured in such diluted samples using a standard assay, such as an ELISA or other similarly arranged assay. As discussed throughout, one of the insights provided by the present disclosure is that such serial dilution (i.e., common in certain previously available assays) may result in inaccurate target measurements due to complicating factors such as saturation from high abundance targets, failure to detect low abundance targets, or targets vulnerable to dilution-induced dissociation.
[0212] In some embodiments, after a sample is obtained or collected, a pretreatment step may be performed, which includes one or more steps, so that the sample is subjected to minimal dilution. In some embodiments, the minimal dilution does not include serial dilution or several serial dilutions. The minimal dilution may vary quantitatively depending on the target, the sample, and the assay. For example, as will be apparent to one skilled in the art, in a given situation, a "minimal" dilution of a sample containing C3 may be considered "minimally" diluted at 1:1000 compared to 1:10000 in a previously available assay, or compared to several serial dilutions of the sample.
[0213] In some embodiments, the dilution is performed during sample preparation. For example, in some embodiments, a pretreatment step includes combining the sample with another agent (e.g., a substrate, e.g., rVWF for an ADAMTS13 cleavage assay). In some such embodiments, the dilution depends on the sample and the substrate. For example, in some embodiments, for an ADAMTS13 assay, the dilution is a 1:10 dilution of the sample and rVWF substrate in solution.
[0214] In some embodiments, the dilution is performed using a sample buffer substantially similar to that used in the assay performed using the test cassette or test cartridge.
[0215] In some embodiments, the dilution is an in-line dilution. For example, in some embodiments, the dilution includes applying the sample to a test cassette as provided by the present disclosure. In some such embodiments, when the sample contacts the immunoassay device of the test cassette (i.e., contacts at least one test strip including at least one test line), after the target has been captured, for example by a competitor, the sample is considered diluted with respect to the concentration of at least one target, which is immobilized and prevented from being captured and / or detected by a subsequent test line.
[0216] Assay According to various embodiments, the disclosure provides techniques (e.g., methods, devices, etc.) for measuring one or more targets in one or more samples. In some embodiments, the disclosure provides assays, devices, and methods for their manufacture, characterization, and use. In some embodiments, one or more assays and / or methods of use thereof are new or improved over previously available assays. In some embodiments, one or more components of one or more assays are new and / or improved over previously available assays and components.
[0217] In some embodiments, an assay of the present disclosure involves contacting an immunoassay device that includes at least one test strip with a sample. In some embodiments, the sample is applied to a test cassette (i.e., an immunoassay device that includes at least one test strip that itself includes one test line). In some such embodiments, the sample contacts the immunoassay device when the sample is applied to the test cassette. In some such embodiments, the sample contacts a conjugate pad and / or a sample pad prior to contacting the at least one test strip. In some embodiments, the sample is applied to the test cassette via a port.
[0218] In some embodiments, when the sample contacts the test cassette and contacts the sample and / or conjugate pad, the sample interacts with one or more reagents before contacting the test strip.
[0219] In some embodiments, the assays of the present disclosure require one or more pretreatment steps before contacting the test cassette with the sample. For example, in some embodiments, the sample may be contacted with an agent in a vessel or container such that the agent and sample are combined prior to contacting the test cassette. In some embodiments, the pretreated sample, or a portion thereof, is applied to the test cassette after a period of time. In some embodiments, the sample is collected or obtained and the sample, or a portion thereof, is combined with an agent (e.g., a substrate, e.g., a recombinant substrate). In some such embodiments, the sample contacted with the agent is diluted by a certain factor (e.g., 1:10) by combining the sample with the substrate. In some embodiments, the sample and agent combination is allowed to stand for 1, 2, 3, 4, 5, 6, 7, 8, 9, 10 minutes or more before contacting the test cassette with the sample / agent combination. In some such embodiments, when the sample is applied to the test cassette, the reacted and / or unreacted portions of the substrate are measured and used to measure the target that reacted with the substrate. For example, in some embodiments, the target is ADAMTS13 and the substrate is VWF. In some such embodiments, the amount of cleaved VWF is measured and used to determine the percent activity of ADAMTS13 in the sample.
[0220] In some embodiments, the sample is divided and one portion is measured with pretreatment and another portion is measured without pretreatment.
[0221] In some embodiments, the assays of the present disclosure may be improved in one or more characteristics, such as efficiency, specificity, sensitivity, accuracy, reliability, and / or latency between obtaining a sample and measuring a target, as compared to one or more previously available assays. In some embodiments, the previously available assays include enzyme-based assays, radioactive assays, colorimetric assays, radial immunodiffusion assays, and / or one or more combinations of assay types. In some embodiments, the techniques (e.g., assays, e.g., lateral flow assays) of the present disclosure are improved as compared to those described in U.S. Pat. No. 8,865,164 or U.S. Patent Application Publication No. 2012 / 0141457, the disclosures of each of which are incorporated herein in their entirety.
[0222] In some embodiments, the techniques (e.g., methods, devices, etc.) of the present disclosure allow for the rapid measurement of one or more targets. In some such embodiments, such techniques avoid problems common to many previously available assays, such as the ability to detect and / or quantify an adequate range for one or more targets.
[0223] Moreover, in contrast to previously available assays, in some embodiments, the assays described herein are suitable for point-of-care use. For example, as described herein, the present disclosure provides techniques that require fewer steps and faster results than previously available assays. That is, the assays described herein do not require extensive handling (e.g., multiple dilution or pretreatment steps), long incubation times before measurements are made, and / or a large number of personnel or machines to measure targets in a sample.
[0224] In support of point-of-care use, in some embodiments, one or more targets are measured within approximately 30 minutes (e.g., within 20 minutes, within 10 minutes, within 5 minutes) of collecting a sample from a subject. In some embodiments, one or more targets are measured within approximately 35, 40, 45, 50, 55, or 60 minutes of collecting a sample from a subject.
[0225] Assay Components The present disclosure provides, among other things, assays for measuring one or more targets in a sample. Among other things, the assay components may be or may include an immunoassay device as described herein, and a reader system (e.g., an immunoassay device reader) into which a test cassette containing a sample is loaded and results are read and / or interpreted.
[0226] immunoassay device Among other things, the present disclosure provides immunoassay devices, methods of manufacture, methods of use, and methods of characterization thereof. As described herein, the immunoassay devices of the present disclosure are or include one or more test strips. In some embodiments, the immunoassay devices further include at least one additional component. In some embodiments, the at least one additional component is or includes a sample pad and / or a conjugate pad. In some embodiments, the at least one test strip and / or the one or more additional components are at least partially contained within a test cassette.
[0227] In some embodiments, one or more additional solid phases are in contact with and / or in close proximity to the test strip. For example, in some embodiments, the test strip is placed on a solid backing card. In some embodiments, a transparent overlaminate material is placed on the test strip. In some embodiments, the test cassette or test cartridge includes a test strip that is placed on the backing card and covered by an optically transparent overlaminate material. In some embodiments, the immunoassay device also includes a conjugate pad and / or a sample pad. In some such embodiments, the conjugate pad and / or the sample pad are attached to or in contact with the test strip. In some embodiments, the test strip of the immunoassay device is contained, partially or completely, within the test cassette or test cartridge. In some such embodiments, the test cassette or test cartridge may be inserted into a reader system (e.g., an immunoassay device reader), which is used to measure one or more test strips and one or more samples on the test line of the immunoassay device. In some such embodiments, the reader system may also include means for coordinating the positioning and measurement process, for example according to an algorithm used to operate one or more components of the system or the reader system as a whole.
[0228] Test specimen The immunoassay device of the present disclosure includes one or more test strips. The test strip is or includes a solid phase and at least one test line. In some embodiments, the device includes at least one, two, three, four, five, six or more test strips. In some embodiments, the test strip is or includes a solid phase. In some such embodiments, the solid phase is or includes a permeable membrane. In some embodiments, the permeable membrane is or includes a nitrocellulose membrane. In some embodiments, the nitrocellulose membrane may have small, medium and / or large pore sizes, which are associated with a particular flow rate such that the larger the pores, the faster the flow rate through the membrane. The slow, medium and fast pore sizes were defined using a water flow rate of 4 cm / sec. In some embodiments, the test strip described herein is contacted by a sample, and the sample moves into and through the solid phase of the test strip, flowing laterally using a capillary and / or gravity mechanism. In some such embodiments, after a sample is applied and flows through the test strip, the sample contacts at least one test line, which includes a capture agent, hi some such embodiments, the target is associated with a detection agent, and the capture agent retains the target:detection agent complex, which can later be used to measure the target.
[0229] Test Line As described herein, the test strip of the present disclosure includes one or more test lines. Such test lines function as a capture zone for one or more targets from a sample applied to the test strip. In some embodiments, the test strip includes at least one, two, three, four, five, six or more test lines. In some embodiments, the test lines function as control lines. That is, in some such embodiments, the test lines are used to measure a known amount of a control target in a control sample.
[0230] In some embodiments, before the target is bound, the test line is or contains one or more capture agents. In some embodiments, the test line is comprised of one or more capture agents and / or one or more detection agents (e.g., when the target is captured and the target contains a detection agent). In some embodiments, the test line contains one or more capture agents and no detection agents. In some embodiments, the test line contains one or more detection agents (e.g., associated with a capture agent on the test line) and one or more capture agents.
[0231] In some embodiments, in a test strip that includes more than one test line, all test lines include the same capture agent and / or detection agent. In some embodiments, in a test strip that includes more than one test line, each test line may include a different capture agent and / or detection agent. For example, in some embodiments, a test line on a given test strip has an equal concentration and volume of one or more components (e.g., capture agent) compared to another test line on the same test strip. In some embodiments, a test line on a given test strip has a different concentration of one or more components (e.g., capture agent, competitor) compared to another test line on the same test strip.
[0232] In some embodiments, more than one target can be measured on any single test line. In some embodiments, all test lines on the test strip fit within an optically transparent viewing window on the test cassette. In some such embodiments, the test lines within the optically transparent window are positioned such that a reader system (e.g., an immunoassay reader system) disclosed herein can visualize and measure one or more targets on one or more test lines.
[0233] In some embodiments, the series of test lines includes lines of a particular width spaced at regular intervals, as described in this disclosure. In some embodiments, each test line that is part of a series of test lines for measuring a given target may include the same or different agents, depending on the given target, and such differences will be apparent to one of skill in the art in light of the circumstances of the particular target. In some embodiments where the test strip includes multiple test lines, such test lines are spaced 2-3 mm apart. In some embodiments, each test line occupies approximately 1 mm x 5 mm and is printed at 0.7 μl / cm. It has been determined that larger volumes of lines result in gradients of binding that are not compatible with reflectance-based reader methods. In some embodiments, after the test lines are striped, the test strip is air-dried. In some embodiments, the air-drying may be performed at elevated temperatures (e.g., 37°C). In some embodiments, the air-drying may be performed in a fan oven.
[0234] In embodiments including a test strip with multiple test lines, one or more test lines closest to the first sample contact point of the test strip contain a capture agent, followed by one or more test lines containing additional capture agents but located further away from the first sample contact point. For example, in some embodiments, each test line on a given test strip may be part of a series of test lines designed to measure a given target. In some such embodiments, each test line contains the same agent, but each test line may serve a different function and purpose within the assay. For example, as a non-limiting example, in a series of four test lines, the test line closest to the sample contact point and entry point on the test strip may contain a capture agent and is not used to measure the target, while subsequent test lines may contain a detection agent (i.e., a capture agent that binds to a target containing a detection agent, measured as provided herein) that is used to measure the target. In some such embodiments, the "first" test line can serve to "dilute" the sample, removing an amount of target that may oversaturate the detectable signal and provide an inaccurate measurement.
[0235] As described herein, a test line may be or function as a control line, hi some such embodiments, such an internal control line verifies whether an assay component is functioning properly.
[0236] Scavenger In some embodiments, the test line of the present disclosure includes at least one capture agent. According to various embodiments, any of a variety of capture agents can be used to retain the target at the test line. In some such embodiments, at least one test line on the test strip includes a capture agent. In some such embodiments, the capture agent is associated with a target that is itself associated with a detection agent, such that the detectable target is retained at the test line that includes a given capture agent. In some embodiments, the target itself may be a detection agent, e.g., in some embodiments, the test line may be a control line, which may include a capture agent that is specific for the detection agent but not for the target being measured in the sample. That is, in some embodiments, the capture agent binds to the target (e.g., target-detection agent complex) from the sample, and in some embodiments, the capture agent binds to the target (e.g., detection agent) from the immunoassay device.
[0237] In some embodiments, the capture agent may be one or more antibodies (e.g., monoclonal or polyclonal), antibody fragments, quantum dots, polypeptides, peptides, peptidomimetics, complement receptors or binding proteins, enzymes (e.g., enzyme-based colorimetric detection agents), arrays, aptamers, bead-based assay-related agents (e.g., polystyrene beads), nanodrops, and / or nanoparticles (e.g., gold colloids, e.g., polystyrene, etc.).
[0238] In some embodiments, the immunoassay device includes at least one, two, three, four, five, six, or more capture agents per test strip. In some such embodiments, at least one test strip includes at least one, two, three, four, five, six, or more capture agents. In some embodiments, a single test line includes a single capture agent. In some embodiments, the immunoassay device of the present disclosure includes two or more test lines, and the capture agents may be the same or different on the different test lines. For example, in a given test strip having four test lines, each test line may have the same and / or different capture agents.
[0239] Drug detection In the immunoassay device of the present disclosure, one or more detection agents are present on the conjugate pad. In some embodiments, the immunoassay device and / or one or more test strips therein include at least one detection agent (i.e., where the target includes a detection agent and is captured by a capture agent). In some such embodiments, at least one test line on at least one test strip includes a detection agent (e.g., where the target includes a capture agent that binds to a target that includes a detection agent). According to various embodiments, any of a variety of detection agents may be used to measure one or more targets. In some embodiments, the test line is measured qualitatively and / or quantitatively. In some embodiments, the test line is not measured (i.e., even if it is visible). In some embodiments, the measurement may be accomplished by a visible means, including but not limited to colorimetric and / or fluorescent detection. As will be appreciated by one of skill in the art, visible is not limited to detection in the visible spectrum, and includes but is not limited to detection in the ultraviolet and infrared spectrum. In some such embodiments, detection may be performed by observation by a person performing the assay. In some such embodiments, detection may be performed using a device capable of reading the test strip.
[0240] In some embodiments, the detection agent is provided or utilized alone. In some embodiments, the detection agent is provided and / or utilized in association with (e.g., bound to) another agent. In some embodiments, the detection agent may be one or more visible or otherwise detectable antibodies (e.g., monoclonal or polyclonal), antibody fragments, quantum dots, polypeptides, peptides, peptidomimetics, complement receptors or binding proteins, enzymes (e.g., enzyme-based colorimetric detection agents), arrays, aptamers, bead-based assay-related agents (e.g., polystyrene beads), nanodrops, nanoparticles (e.g., gold colloids, e.g., polystyrene, etc.), and / or agents for use in photonic crystal enhanced fluorescence (PCEF) assays. In some embodiments, the detection agent comprises an antibody or a portion thereof. In some embodiments, the detection agent is or comprises an antibody associated with one or more of the exemplary detection agents described herein. In some embodiments, the detection agent is target specific (e.g., conjugated to a target-specific binding agent).
[0241] In some embodiments, the detection agent is or includes one or more solid or semi-solid structures. In some embodiments, the solid structures are spheres (e.g., solid or semi-solid nanoparticles). In some embodiments, such nanoparticles may be made of any material known to one of skill in the art, given the circumstances (e.g., gold, polystyrene, etc.), bound or associated with one or more additional detection agents (e.g., fluorescent molecules, enzymes, etc.). In some such embodiments, the nanoparticles may be from 20 nm to 1000 nm. In some embodiments, the nanoparticles may be from about 20 nm to about 600 nm in diameter. For example, in some embodiments, the detection agent may be bound to or associated with beads that are approximately 20 nm, 30 nm, 40 nm, 50 nm, 60 nm, 70 nm, 80 nm, 90 nm, 100 nm, 150 nm, 200 nm, 250 nm, 300 nm, 350 nm, 400 nm, 450 nm, 500 nm, 550 nm 600 nm or larger.
[0242] By way of non-limiting example, detection agents can include various ligands, radionuclides (e.g., 3 H, 14 C. 18 F, 19 F, 32 P, 35 S, 135 I, 125 I, 123 I, 64 Cu, 187 Re, 111 I, 90 Y, 99m Tc, 177 Lu, 89 Zr, etc.), fluorescent dyes (see below for certain exemplary fluorescent dyes), chemiluminescent agents (e.g., acridinum esters, stabilized dioxetanes, etc.), bioluminescent agents, spectrally resolvable inorganic fluorescent semiconductor nanocrystals (i.e., quantum dots), nanoparticles (e.g., gold, silver, copper, platinum, polystyrene, etc.) nanoclusters, paramagnetic metal ions, enzymes (e.g., enzymes that can be detected with a visualizeable label, e.g., chemiluminescent detection agents, colorimetric detection agents, etc.), colorimetric labels (e.g., dyes, colloidal gold and / or silver, etc.), biotin, dioxygenin, haptens, and proteins for which antisera or monoclonal antibodies are available.
[0243] In some embodiments, the immunoassay device includes at least one, two, three, four, five, six, or more individual detection agents per test strip. For example, in some such embodiments, at least one test strip includes at least one, two, three, four, five, six, or more detection agents.
[0244] In some embodiments, the detection agent is used to perform one or more qualitative target measurements. In some embodiments, the detection agent is used to perform one or more quantitative target measurements. In some embodiments, the detection agent is used to perform one or more qualitative and quantitative target measurements.
[0245] Competitor In some embodiments, the test strip of the present disclosure includes at least one competitor. According to various embodiments, any of a variety of competitors can be used to adjust the concentration of the target in the sample within the test strip. In some such embodiments, at least one test line on the test strip includes a detection agent. In some embodiments, the test strip may include a competitor that is not localized to the test line. For example, in some embodiments, the competitor may be present in / on the solid phase of the immunoassay device of the present disclosure (e.g., the sample pad, the conjugate pad, the test strip, and / or the test line). For example, in some embodiments, the solid phase component of the present disclosure may include a competitor to remove a portion of the target. In some such embodiments, a portion of the target may be removed to allow a subsequent test line to efficiently, accurately, specifically, reliably, sensitively, and / or rapidly measure a given target in a sample. That is, as known to those skilled in the art, previously available assays were unable to measure a specific target without serial sample dilutions due to supersaturated detectable signal components of high abundance target concentrations.
[0246] In some embodiments, the competitor may be one or more antibodies (e.g., monoclonal or polyclonal), antibody fragments, quantum dots, polypeptides, peptides, peptidomimetics, complement receptors or binding proteins, enzymes (e.g., enzyme-based colorimetric detection agents), arrays, aptamers, bead-based assay-related agents (e.g., polystyrene beads), nanodrops, and / or nanoparticles (e.g., colloidal gold, e.g., polystyrene, etc.).
[0247] In some embodiments, the immunoassay device includes at least one, two, three, four, five, six, or more competitors. In some such embodiments, at least one test strip includes at least one, two, three, four, five, six, or more competitors.
[0248] In some embodiments, a competitor is used to reduce or eliminate the prozone effect. As known to those skilled in the art, the prozone effect (also known as the hook effect) is a phenomenon that occurs when the concentration of a target is so high that it impairs the binding partner of that target from forming a complex. For example, in some embodiments, the level of the target may be so high that an antibody against that target is actually impaired by complexing with that target. That is, instead of a linear or otherwise proportional increase in concentration indicating an increase in complex formation, when the prozone effect occurs, as the concentration increases, complex formation first stops increasing and then decreases at very high concentrations. In some embodiments, the prozone effect may occur, for example, in the presence of a high concentration of target and / or a high concentration of a competing or detecting agent that binds to the target. Thus, a competing agent may be added to the sample to reduce the concentration of the target by binding or complexing with the detecting agent prior to measuring the target.
[0249] solid phase In some embodiments, the immunoassay device of the present disclosure includes one or more solid phases. For example, in some embodiments, the immunoassay device includes a test strip that is or includes a solid phase. As described herein, in some embodiments, the test strip includes a permeable membrane. In some such embodiments, the permeable membrane is or includes nitrocellulose. In addition to the test strip, the immunoassay device of the present disclosure may further include one or more additional solid phases, including, but not limited to, a backing card on which the test strip is placed, a sample pad, a conjugate pad, and / or an overlay material (e.g., an optically clear overlay covering the test strip).
[0250] Sample Pad In some embodiments, the test cassette of the present disclosure includes a sample pad. In some embodiments, the sample pad is or includes a capture zone. In some such embodiments, the sample pad includes one or more components for modifying or altering the content of one or more samples (e.g., by adjusting or buffering the pH of the sample). For example, in some embodiments, the sample pad includes a sample buffer. In some embodiments, the sample buffer is specific to a given sample type (e.g., blood, urine, plasma, etc.) to ensure that the pH of the liquid sample applied to the test cassette is within a particular range.
[0251] In some such embodiments, the sample pad includes one or more components for modifying or altering one or more sample contents (e.g., by capturing one or more components) before entering the test strip. For example, in some embodiments, the sample includes an antibody. As a non-limiting example, in some embodiments, the antibody is an antibody for capturing and / or filtering red blood cells from a whole blood sample after the test strip contacts at least a first component of the immunoassay device of the present disclosure that is not the first component, and before the sample contacts at least one test strip of the immunoassay device. That is, the sample may be applied to a sample pad that includes an anti-RBC antibody such that the sample is depleted of RBCs before the sample contacts the test strip of the immunoassay device.
[0252] Conjugate Pad In some embodiments, the test cassette of the present disclosure includes a conjugate pad. In some embodiments, the conjugate pad is or includes a solid phase. In some embodiments, the conjugate pad includes at least one detection agent. In some embodiments, the detection agent is or includes one or more detection beads. In some embodiments, the detection beads may be gold or polystyrene. In some embodiments, the detection beads may be approximately 30 nm to 600 nm in diameter. In some embodiments, the detection agent is or includes a non-bead-based visualizable signal (e.g., a fluorescent moiety, etc.). In some embodiments, the conjugate pad includes two, three, four, five, six, or more detection agents. In some embodiments, the conjugate pad includes one or more of a detergent, one or more buffer components, and / or a blocking protein.
[0253] Housing (Test Cassette / Test Cartridge) In some embodiments, the test cassette comprises an immunoassay device of the present disclosure contained completely or partially within a housing, hi some embodiments, such a solid test cassette is or comprises a substantially solid material (e.g., rigid, semi-rigid, flexible) that at least partially surrounds the immunoassay device.
[0254] In some embodiments, the test cassette is a three-dimensional shape that can be rectangular or square.
[0255] In some embodiments, the test cassette includes a port, hi some such embodiments, the sample is applied to the test cassette using the port.
[0256] In some embodiments, the test cassette can be inserted into the reader system such that the sample flows in the direction of gravity, in some embodiments, the sample is applied to the test cassette and allowed to rest on a surface to develop before being placed into the reader system, and in some such embodiments, the sample flows laterally through the test strip using capillary action.
[0257] In some embodiments, the sample is applied to the test cassette, positioned vertically, and developed with the sample flowing laterally (using capillary action and gravity). In some embodiments, the test cassette is inserted into the reader system in a vertical position. In some embodiments, the test cassette is inserted into the reader system, the sample is applied to the sample port after insertion, and the test cassette is then allowed to develop (i.e., the sample is allowed to move through the test strip in the direction of gravity) before measuring one or more targets on the test strip.
[0258] In some embodiments, the test cassette comprises an immunoassay device, which further comprises a sample pad, a conjugate pad, a backing card (on which one or more test strips are placed), and an optical overlay (covering the test strips including the one or more test lines). In some embodiments, the solid material is rigid, semi-rigid, or flexible.
[0259] In some such embodiments, the test cassettes disclosed herein can be inserted into a reader system. In some embodiments, the test cassette includes a single port (e.g., RapiPlex, Compact act, etc.). The present disclosure also provides methods of using such immunoassay devices on one or more reader systems (e.g., RapiPlex, e.g., Compact act, e.g., other immunoassay reader systems). Exemplary reader systems are disclosed, for example, in WO2013 / 014540, which is incorporated herein by reference in its entirety.
[0260] Assay Steps In some embodiments, the disclosed technology provides methods and devices for measuring one or more targets using one or more assays as described herein. In some embodiments, the assay includes one or more steps including obtaining a sample, optionally setting aside a portion of the sample (e.g., for later comparison or banking), optionally pre-treating the sample or a portion thereof, measuring one or more targets in the sample, and optionally treating the subject based on the results of the measurements. In some such embodiments, such methods are performed using the disclosed assays and devices. Thus, in some embodiments, the disclosed methods may include obtaining a sample and applying a portion of the sample to the disclosed immunoassay device.
[0261] After application of the sample, the sample rehydrates at least one test strip of the immunoassay device. In some such embodiments, the sample rehydrates a detection agent on the test strip (e.g., on the strip, e.g., in a test line). In some embodiments, targets in the sample react with a detection agent that includes a labeled detector that was added during striping and cassette assembly.
[0262] In some embodiments, when the sample comprises whole blood, the red blood cells are retained on the filter pad, in some such embodiments, retention is achieved using an antibody (e.g., an anti-RBC antibody) applied to or included on the sample pad of the test cassette.
[0263] In some embodiments, an amount of target interacts with and reacts with the competitor to remove that amount of target from the pool of "free target" in the sample. After removing an amount of target at a point on the test strip (e.g., near the application port where the sample is first applied), the sample continues to flow through the solid phase of the immunoassay device. For example, by way of non-limiting example, Figures 7 and 12 show exemplary competitors that remove a portion of the target from the sample. In some such embodiments, the target is considered a high abundance target. In some such embodiments, after the sample contacts the competitor, the target-competitor complex may continue to migrate up and along at least one test strip, but will migrate up and past any subsequent test lines, allowing any additional "free target" to be bound / captured by any detection agent on those test lines for measurement according to the present disclosure.
[0264] In some embodiments, if the conjugate pad contains a competitor and the target binds to the competitor, upon entering the test strip, any target:competitor complexes will migrate through a test line that contains a capture agent that binds to the same target as the competitor. In some embodiments, if the target is bound to a detection agent, as the sample migrates to and through the test line, the capture agent may bind to the target such that the capture agent associates with the target associated with the detection agent and can then be visualized.
[0265] In some embodiments, the test strip is allowed to sit for 5, 10, 15, 20, 25, or 30 minutes while the assay is developed (e.g., for one or more targets in the sample to interact and react with the test strip and one or more detection agents and or competitors). In some embodiments, during development, a test cassette is inserted into a reader system (see, e.g., WO2013 / 014540 for exemplary reader systems) and a test protocol is selected. In some embodiments, the sample is added to the test cassette after it is inserted into the reader system, and development can occur with the test cassette already placed in the test reader. In some embodiments, the test cassette includes a barcode that is read by the reader system. In some embodiments, a user must select a test protocol that corresponds to the test sample and test panel of one or more test strips of the assay. In some embodiments, the test cassette is placed in the appropriate area on the reader system, sample identification information is entered or automatically uploaded (e.g., in a barcoded cassette), a scan of one or more test strips is performed, and one or more targets are measured.
[0266] In some embodiments, a QC cassette is run before or after the test cassette to ensure that the reader system is operating within an acceptable set of parameters, as would be understood by one of ordinary skill in the art using such reader systems.
[0267] In some embodiments, the results from one or more measurements are stored on a local device, on a server, and / or on another recordable and archived medium, hi some such embodiments, the results are recorded in the patient record.
[0268] The sample can be detected using a detector that detects one channel or multiple channels (e.g., a Compact or RapiPlex reader system, see, e.g., US9199232, which is incorporated by reference in its entirety, and also see, e.g., WO2013 / 014540, for a description of cartridges, systems, devices, and reader systems).
[0269] measurement In some embodiments, the measurement is quantitative. In some embodiments, the measurement is qualitative. In some embodiments, the measurement comprises a qualitative assessment of "absent". In some embodiments, the measurement comprises a quantitative assessment of "zero" or less than the LLOQ.
[0270] In some such embodiments, the quantitative measurement of the target is expressed as a percentage of the activity of a reference. For example, in some embodiments, the target is ADAMTS13 and the measurement is expressed by determining the percentage activity using a known concentration of the starting VWF substrate in the sample and substrate mixture.
[0271] In some embodiments, the target is measured indirectly, such as by reaction with a substrate and quantitating substrate consumption, cleavage (eg, of the substrate) or other detectable modification.
[0272] In some embodiments, the measurement is qualitative, hi some embodiments, the measurement comprises detecting the absence of a target.
[0273] In some such embodiments, the amount (e.g., concentration) of the target is zero. In some embodiments, the amount of the target appears to be zero, while in some embodiments it may be present at a low level, but below the LLOQ of the measurement. In some embodiments, the measurement comprises detecting the presence and / or amount (e.g., concentration) of the target.
[0274] How to use The present disclosure provides techniques, including methods of using the devices. In some embodiments, the present disclosure provides methods of characterizing and / or measuring targets, as well as methods of diagnosing, monitoring, and treating patients as disclosed herein. In some embodiments, the subject has or is at risk of having or developing one or more diseases, disorders, or conditions as disclosed herein. In some embodiments, the subject is undergoing treatment, for example, with a therapeutic agent (e.g., an antibody, e.g., gene therapy, e.g., CAR-T, etc.).
[0275] Diagnosis, Treatment, and Patient Monitoring Among other things, the present disclosure provides various new methods and treatment regimens for improving the treatment of patients having one or more complement-mediated or related diseases, disorders, or conditions as described herein. In some embodiments, the present disclosure provides diagnostic methods for patients suffering from or at risk for one or more diseases, disorders, or conditions as described herein. In some such embodiments, such diagnostic methods include eliminating one or more diseases, disorders, or conditions from a list of suspected or differential diagnoses for the patient.
[0276] In some embodiments, the present disclosure provides a method of treatment for a patient having one or more diseases, disorders, or conditions as described herein. In some embodiments, a patient may suffer from or be at risk for more than one disease, disorder, or condition.
[0277] In some embodiments, treatment describes any administration of a treatment, intervention, substance, or any combination thereof that partially or completely alleviates, improves, alleviates, inhibits, delays the onset of, reduces the severity of, and / or reduces the occurrence of one or more symptoms, characteristics, and / or causes of a particular disease, disorder, and / or condition. For example, in some embodiments, treatment may include an intervention that includes removal or removal of a substance (e.g., from a patient). In some embodiments, administration of treatment may include removal of a composition and / or addition of a different composition and / or intervention. In some embodiments, administration that includes removal of a composition may be or include adding an intervention such as plasma exchange (e.g., removing or diluting a particular agent in the subject's system). In some embodiments, treatment may be of a subject that does not show obvious signs of the relevant disease, disorder, and / or condition, for example, in some embodiments, treatment may be administered when one or more changes in one or more targets are detected, regardless of whether any obvious clinically observable phenotype occurs (i.e., excluding the measurement of the target). In some embodiments, treatment may be of a subject that shows only early signs of a disease, disorder, and / or condition. Alternatively or additionally, in some embodiments, such treatment may be of a subject who exhibits one or more established symptoms of the associated disease, disorder, and / or condition. In some embodiments, treatment may be of a subject who has been diagnosed as suffering from the associated disease, disorder, and / or condition. In some embodiments, treatment may be of a subject who is known to have one or more susceptibility factors that are statistically correlated with an increased risk of developing the associated disease, disorder, and / or condition.
[0278] As described herein, the subject may have or be at risk of having one or more diseases, disorders, or conditions associated with alterations in complement proteins or complement pathway-related proteins.For example, by way of non-limiting example, in some embodiments, the subject may have or be at risk of having or developing hematopoietic stem cell transplantation-associated thrombotic microangiopathy (HSCT-TMA), complement-mediated thrombotic microangiopathy (CM-TMA), atypical hemolytic uremic syndrome (aHUS), thrombotic thrombocytopenic purpura (TTP), COVID19, lupus erythematosus, lupus nephritis, cytokine release syndrome, Alzheimer's disease (AD), or combinations or complications thereof.
[0279] In some embodiments, the present disclosure provides methods for monitoring disease activity in patients having or at risk for one or more diseases, disorders, or conditions as described herein. In some embodiments, the present disclosure provides methods for predicting the onset or increase in activity (e.g., disease flare, e.g., increase in one or more symptoms of a disease) in patients having or at risk for one or more diseases, disorders, or conditions as described herein. In some such embodiments, such methods provide improved treatment compared to treatment in the absence of such techniques (e.g., devices, methods) provided by the present disclosure.
[0280] In some embodiments, the present disclosure provides a method for diagnosing a subject having a disease, disorder, or condition. For example, without being bound by any particular theory, in some embodiments, the present disclosure provides a technique for measuring one or more levels of one or more targets, and comparing the measurements of those targets, such as a control / external reference or a previous sample from the same patient, makes or excludes a diagnosis of a disease, disorder, or condition. In some embodiments, such a disease, disorder, or condition may be or may include age-related macular degeneration (AMD), complement 3 glomerulopathy (C3G), hematopoietic stem cell transplantation-associated thrombotic microangiopathy (HSCT-TMA), complement-mediated thrombotic microangiopathy (CM-TMA), atypical hemolytic uremic syndrome (aHUS), thrombotic thrombocytopenic purpura (TTP), COVID19, lupus erythematosus, lupus nephritis, cytokine release syndrome, Alzheimer's disease (AD), or a combination thereof.
[0281] In some embodiments, the present disclosure provides methods for preventing or reducing the severity of one or more symptoms associated with the risk of developing or diagnosing one or more diseases, disorders or conditions provided herein. In some such embodiments, for example, the present disclosure provides methods for administering treatment or implementing treatment changes when one or more target measurements are outside of a particular range disclosed herein.
[0282] In some embodiments, the present disclosure provides a method for determining the effectiveness of a treatment for treating at least one disease, disorder or condition.For example, in some embodiments, the present disclosure provides a method, comprising measuring a first target measurement in a sample from a subject at risk of having, suspected of having, or having one or more diseases, disorders, or conditions described herein, and optionally administering at least one treatment to the subject if the target measurement does not fall within a satisfactory range.In some embodiments, the present disclosure provides a method for measuring a second target measurement (of the same or different target as the first measurement) in a sample from the same subject when a treatment is administered to the subject, and implementing a change in treatment if the second measurement does not fall within a satisfactory range.
[0283] In some embodiments, administering or carrying out the therapeutic change results in an increase in the measurement of one or more targets in the subject.In some such embodiments, the subject does not experience an increase in the risk of disease or one or more symptoms of disease within approximately 30 minutes, 1 hour, 2 hours, 3 hours, 4 hours, 5 hours, 6 hours, 7 hours, 8 hours, 9 hours, 10 hours, 12 hours, 18 hours, 24 hours, 48 hours, 72 hours, 96 hours, 1 week, 2 weeks, 3 weeks, or 4 weeks after administering or carrying out the therapeutic change.
[0284] In some embodiments, administering or administering the therapeutic change results in an increase in the measurement of one or more targets in the subject. In some embodiments, the increase in the measurement of one or more targets occurs within one month (e.g., within three weeks, within two weeks) of the administering or administering step. In some embodiments, the increase in the measurement of one or more targets occurs within one week (e.g., within six days, within five days, within four days, within three days, within two days, within one day) of the administering or administering step.
[0285] In some embodiments, administering or carrying out the therapeutic change results in a decrease in one or more target measurements in the subject.In some such embodiments, the subject does not experience a decrease in the risk of disease or one or more symptoms of disease within approximately 30 minutes, 1 hour, 2 hours, 3 hours, 4 hours, 5 hours, 6 hours, 7 hours, 8 hours, 9 hours, 10 hours, 12 hours, 18 hours, 24 hours, 48 hours, 72 hours, 96 hours, 1 week, 2 weeks, 3 weeks, or 4 weeks after administering or carrying out the therapeutic change.
[0286] In some embodiments, administering or implementing the therapeutic change results in a decrease in the measurement of one or more targets in the subject. In some embodiments, the decrease in the measurement of one or more targets occurs within one month (e.g., within three weeks, within two weeks) of the administering or implementing step. In some embodiments, the decrease in the measurement of one or more targets occurs within one week (e.g., within six days, within five days, within four days, within three days, within two days, within one day) of the administering or implementing step.
[0287] In some embodiments, the at least one treatment comprises administering or discontinuing administration of one or more of gene therapy, cell-based therapy, checkpoint inhibitors, steroids, nonsteroidal anti-inflammatory drugs (NSAIDs), hydroxychloroquine, chloroquine, quinacrine, methotrexate, azathioprine, sulfasalazine, cyclophosphamide, chlorambucil, cyclosporine, complement inhibitors such as mycophenolate mofetil, mycophenolate sodium, rituximab, belimumab, one or more anti-complement protein antibodies, or other chemical (e.g., small molecule, nucleic acid, etc.) inhibitors thereof, plasmapheresis, physical therapy, sleep therapy, and cognitive behavioral therapy. In some embodiments, the at least one treatment is part of or comprises a combination therapy administered to the subject.
[0288] In some embodiments, the treatment is administered to a subject in vivo. In some embodiments, the treatment is administered ex vivo (e.g., to cells or fluids of a subject and then the treated cells or fluids are introduced into the subject). In some embodiments, the treatment is tested or characterized in vitro (e.g., in or including bodily fluids from a subject, artificial bodily fluids, cell lines, primary cells or cell cultures, etc.).
[0289] kit In some embodiments, the present disclosure provides a kit for measuring one or more targets disclosed herein. In some embodiments, the kit includes an immunoassay device housed inside a test cassette and further includes suitable packaging for storage. In some embodiments, the packaging may be or include one or more qualities including light-proof (e.g., a foil bag), a desiccant component or ingredient, and a heat-stable material to maintain the cassette in ambient dry conditions (e.g., protected from moisture, etc.).
[0290] In some embodiments, the kit includes a test cassette that includes an immunoassay device that itself includes up to six test strips, each strip including at least four test lines and, optionally, at least one control line (i.e., up to five test lines, one of which is or functions as a control line).
[0291] In some embodiments, a control sample is provided to be run on a control test cassette and / or measured on a control line on a test line of an immunoassay device, as provided herein.
[0292] In some embodiments, the kit includes a test cassette that includes a barcode.In some embodiments, the kits of the present disclosure include a disposable transfer pipette for applying the sample to the test cassette.
[0293] Equivalent While the present disclosure has been described in conjunction with its detailed description, it should be understood that the foregoing description is intended to be illustrative, and not limiting, of the scope of the present disclosure, which is further defined by the appended claims. Other aspects, advantages, and modifications are within the scope of the following claims. EXAMPLES
[0294] The present disclosure provides, inter alia, techniques that can efficiently, sensitively, specifically, reliably, rapidly, and / or accurately measure (e.g., detect, e.g., quantify) one or more targets in a sample without diluting the sample prior to measurement. That is, the techniques described herein can rapidly achieve, reliably achieve, and provide accurate measurements of one or more targets over a wide range of concentration(s) without the need for offline dilution or other sample manipulation. Such measurements can provide previously unattainable insights and information that can be used, for example, in research and development, as well as in clinical trial monitoring and point-of-care diagnostics and / or monitoring of therapeutic drugs in patients. The following examples demonstrate exemplary devices, targets, and methods for rapid and accurate measurement thereof, including measurements of binder:target interactions and improvements to existing techniques (see, e.g., Schramm EC et al., (2015) Anal Biochem, 477:78-85, US8835184, US9164088, and US9182396, each of which is incorporated by reference in its entirety herein).
[0295] Example 1: Test Cassette Assembly This example provides an exemplary cassette assembly including an immunoassay device that can be used with the methods provided herein. Such a cassette is compatible with different reader systems (e.g., Compact or RapiPlex systems). A schematic diagram of an exemplary configuration of components contained in a test cassette (e.g., an immunoassay device including at least one test strip, the test strip including at least one test line, a sample pad, a conjugate pad, and / or a backing card) is shown in FIG. 3.
[0296] Test Cassette Assembly Test cassettes were fabricated on 30 cm x 60 mm or 30 cm x 35 mm backing cards for use with the Compact and RapiPlex measuring devices, respectively. In this example, a single-sided pressure-sensitive adhesive polyester was used. The backing card provides the physical structure and support for the cassette and test membranes. A test strip or set of six test strips containing a nitrocellulose (NC) membrane was laminated onto the backing card. In some variations, a NC membrane with a larger pore size was used.
[0297] Striping Unlabeled antibody reagents (i.e., capture agents) were immobilized on the NC membranes in their respective capture zones (i.e., in the test lines) using an in-line striping device to apply the test lines. The test lines were applied to the test strips using an Imagene device (see, e.g., US9199232, which is incorporated herein by reference in its entirety). The striping technology was developed to allow for target quantification across 4-5 log concentrations for one or more targets within a single test strip using a single sample (improving at least 1-2 logs over previously available assays). That is, the striping technology developed and described herein was created and designed such that the assays of the present disclosure can be performed on two or more types of liquid samples, such as blood or urine, and further, the assays can be performed on neat or significantly undiluted samples (e.g., samples including blood with 1-2 fold or less dilution compared to previous assays requiring a 1:20 dilution).
[0298] As will be appreciated by those skilled in the art, it is not trivial or straightforward to switch from one type of sample (e.g., blood) to another type of sample (e.g., urine) and maintain the same specificity and sensitivity for a target. For example, prior to the techniques provided herein, assays for sC5b-9 (e.g., ELISA assays, e.g., single-line lateral flow assays) could detect 100-100,000 ng / mL in blood, and in addition, such assays required 1:20 off-line dilutions. In contrast, the techniques described herein can achieve improved lower limits of quantification (e.g., 1 ng / mL for sC5b-9) while continuing to detect targets at very high upper limits of quantification (e.g., 100,000 ng / mL for sC5b-9), e.g., without requiring several serial dilutions to obtain targets within the measurable range for a given assay. Thus, the techniques provided also improve the assay range for one or more targets.
[0299] Among other things, this improvement allows samples such as urine that may have more dilute levels of target to be measured without additional significant off-line dilution that may, for example, increase processing time, destroy or generate artifacts in the measurement of one or more targets, and / or increase costs and steps associated with target detection and quantification. That is, the present disclosure provides an assay that can be used with targets in blood or liquid samples other than blood, such as urine, ocular fluid, cerebrospinal fluid, etc. In contrast, other assays can detect specific targets (e.g., sC5b-9) in blood or urine, but do not have the sensitivity or improved utility of the assays described herein, and thus may result in false negative measurements. Furthermore, the techniques provided herein create and improve various features of previous assays, such as improved off-line dilution ratios, improved lower limits of quantification, and improved sensitivity and accuracy.
[0300] Importantly, to overcome limitations and challenges associated with quantification in assays such as lateral flow assays that may include a single test line for detecting a single target, the test strips are striped with multiple test lines capable of detecting and quantifying one or more targets. Here, the combination of multiple test lines, competitors, capture agents and / or detection agents, and / or one or more agents on the sample and / or conjugate pads provides unexpected and unprecedented efficiency, accuracy, high sensitivity, specificity, high reliability, and / or rapidity of target measurement. For example, striping the strips with multiple test lines allows for the measurement of low and high concentrations of a particular target without the need for substantial dilution or manipulation of the sample.
[0301] Importantly, these innovations provide the ability to measure low and high abundance targets, as well as targets that may be or include labile proteins, in situations where the concentration range is wide and / or sample manipulation may affect whether the measurement is accurate. For example, targets that may be activated by manipulation as described herein, causing falsely elevated measurements reported for that target, or targets that may be dissociated from a therapeutic agent, resulting in falsely elevated measurements reported for that target. Here, the results demonstrate that multiple test lines improve the detection range of a particular target, providing a solution to a long-standing problem with assay limitations resulting from narrower detection ranges or saturation. That is, narrow detection ranges in previously available assays are caused by insufficient LLOQ and / or ability to detect low abundance targets and saturation of the detection agent, resulting in artifactual measurements. Importantly, in the absence of multiple lines, increasing the concentration of the target detector did not improve assay sensitivity. Rather, assay sensitivity was negatively affected, as increasing detector concentration on a test strip with a single test line showed increased background and / or masked test line signal from detection.
[0302] Thus, in some versions of the assay of the disclosed technology, multiple capture zones are striped for each target per membrane. Each test line (stripe) occupies approximately 1 mm x 5 mm and is printed at 0.7 μl / cm to ensure a crisp, sharp line. It was determined that larger volume lines would produce a gradient of binding that is not compatible with reflectance-based reader methods. In some versions of the assay, multiple lines are striped for the first protein (for removal), followed by a test line for the target. The control capture reagent is an independent antibody pair and is striped on each of the respective membranes in the control zone (downstream of the capture zone).
[0303] For one type of test strip, it was determined that 4 mg / mL (approximately 2 μg protein per test line per strip) provided the maximum capacity for stable binding of target detection agents (e.g., antibodies) to the nitrocellulose membrane that constitutes the strip. It was determined that overloading the printed test lines with protein could run the risk of uncontrolled amounts of antibody being washed away at the first sample front that enters and passes through the test line, which in turn could affect strip-to-strip reproducibility, sensitivity, and product stability.
[0304] Test strips were developed with at least four test lines (see, e.g., Figures 3, 4, and 5) and, optionally, at least one control line per strip. In one version of the assay, each test line is within a readable window of the cassette (see, e.g., Figure 2B, which shows a cassette with four test lines). The test lines were spaced 2-3 mm apart to allow detection on the reader. An internal control confirmed that the test components were functioning properly, and then the membranes were air-dried at high temperature in a fan oven.
[0305] For example, as shown in Figures 2B, 3, and 4, the test line closest to the sample port and / or conjugate pad (L4) detects one end of a range of samples (e.g., lowest concentrations), while L1, furthest from the sample port, detects the highest concentrations toward the end of the strip in the direction of sample flow, e.g., when L4 and L3 are saturated. This unique setup and combination of test lines and reagents enables the test strips and cassettes of the present disclosure to efficiently, specifically, accurately, reliably, and / or sensitively measure one or more targets from a sample without significant prior dilution (e.g., neat sample).
[0306] Striping for non-specific antibody incorporation As an example, the first two of the four test lines along which the sample migrates are striped containing an antibody to capture excess protein (e.g., anti-factor B mAb) designed to remove that protein. The second line in the sample flow sequence captures the target Ba. Then, only the last two lines, the target test lines, are measured (see, e.g., FIG. 5).
[0307] Striping for additional detectors (to remove "excess" targets from the sample) For assays with high target concentrations, at least four test lines are striped. The first test line (e.g., lines 1 and / or 2) absorbs the target and becomes saturated. The remaining target migrates onto the next test line, and if still in excess, this test line also becomes saturated. This process continues. An accurate reading is obtained from the test line that is not saturated (see, e.g., FIG. 4). An additional step is incorporated for certain targets that is also designed to overcome the problem of high concentration. This step requires the incorporation of a competitor into the conjugate pad. This competitor absorbs excess target without being visible as or by the detection agent, so that saturation of the assay does not occur and accurate measurements can be obtained (see, e.g., US9199232, which describes a capture zone containing multiple targets).
[0308] Test line application for multiple test cassettes To generate immunoassay devices and test cassettes capable of measuring one or more targets from a single sample, test lines are prepared as described herein with appropriate reagents (e.g., detection agents, e.g., competitors, etc.). The test lines are striped with one or more capture agents to capture and visualize multiple targets within a given test strip. Immunoassay devices for multiplexing may include up to six test strips, each with up to four test lines, for a total of 24 different measurement lines.
[0309] Preparation of conjugate pad A conjugate pad was prepared with a labeled detector (see, for example, FIG. 2A). In some versions of the assay, detector beads with a larger surface area were used. In other versions of the assay described herein, a competitor was added to the conjugate pad. In yet other versions of the assay described herein, the detector concentration was doubled.
[0310] The conjugate pad, sample pad and NC membrane were laminated onto a backing card as a stack (see, e.g., Figures 3, 4 and 5). In some versions of the assay described herein, an optically clear overlaminate was placed over the specimen portion and a portion of the membrane, covering the free space diffusion zone. The overlaminate was positioned to leave a 3 mm contact zone of the upper wick exposed at the distal end of the membrane. The laminated card was then converted to a 5 mm width and the assembly was placed into a cassette. The cassette assembly brought the bulk absorbent material into contact with the exposed contact zone of the membrane.
[0311] Improved sample flow During assay development, in some tests, sample entry into and / or from the test specimen appeared to be impaired when the sample was placed in the test cassette. To improve cassette function for assays where sample transfer appeared to be impaired, the NC solid phase was replaced with a faster flow rate NC membrane with larger pore size. After the membrane replacement, the sample flowed into the cassette without getting caught on any part of the cassette assembly.
[0312] Example 2A: Assay Development This example illustrates the development of the technology of the present disclosure. Specifically, the present disclosure provides a unique combination of insights and steps to create the test strips described herein, and further provides methods of use thereof, whereby assays using the test strips and immunoassay devices described herein achieve results with improved efficiency, sensitivity, specificity, reliability, speed, and / or accuracy compared to other immunoassays. This format also allows for multiplexing and use of samples that do not require extensive handling or processing prior to measurement. The development and creation of assays for the test strips disclosed herein begins with the selection of one or more detection or capture agents. That is, two exemplary targets, C3 and C5, were measured using an exemplary test strip, such as that which will be part of the immunoassay device of the present disclosure, as disclosed herein.
[0313] Antibody Selection: First, antibody selection was performed using a directed antigen EIA format to screen several antibodies (e.g., commercially available antibodies, custom antibodies, etc.). This initial screening process established the baseline sensitivity and specificity of each test antibody in a neutral sample matrix (here, buffer). The antibodies were then screened against antigen-coated plates to determine the highest sensitivity (e.g., lower and upper limits of detection) for the target. The antibodies were also screened against cross-reactive antigen-coated plates to determine the specificity for the target. The antibody concentrations were titrated to compare the performance of all antibodies evaluated.
[0314] EIA assay: The selected antibodies (from the screening in step 1) were evaluated in a sandwich immunoassay. These evaluations were performed to ensure that the selected antibodies were complementary and not competing with one epitope of the target. Each antibody evaluated was tested in both orientations: (i) on a solid phase, and (ii) as a liquid / fluid-based detector. This established the sensitivity of any pair of antibodies, but importantly, the EIA configuration did not necessarily translate to the LFA configuration of the test strips disclosed herein, for example, because the LFA format requires faster kinetics than EIA and therefore higher specificity of the target binder, including that in contrast to EIA, non-specific material is not washed away in the LFA format. Here, the setup is similar to a standard immunoassay in that the capture antibody is on the solid phase, the target is captured, and the liquid detector binds to the captured target.
[0315] Half-dipstick LFA: Each antibody was striped as a single test line onto a medium flow nitrocellulose membrane at 1 mg / mL in a buffer with similar salt and pH as the buffer in which the antibody was originally supplied / rehydrated. Anti-species antibody complementary to the detector antibody being evaluated was striped 5 mm from the test line. Printed test cards were dried at 37°C for a minimum of 30 minutes. If necessary, dried cards can be stored sealed in foil bags with desiccant.
[0316] Each antibody was coupled to a detector (colloidal gold, polystyrene beads or fluorescent molecules). The antibody:detector ratio, concentration of antibody at the coupling step, coupling buffer, pH at each step of the coupling process, time of each step, and recipes for both post-coupling and storage buffers were evaluated in the following steps. Coupling conditions were evaluated for the antibodies by making small mL volumes of conjugate to test, store, and retest small volumes across a range of conditions to determine appropriate conditions for scale-up. The OD and visual clarity of the conjugates were recorded at the time of manufacture. The conjugates were stored refrigerated and the OD and visual clarity were inspected again before testing. Any solutions with a change in OD, visual clarity, and uniformity of the liquid conjugate of more than 10% indicate the conjugate recipe is not stable and should not be advanced for testing. All antibodies were conjugated in the absence of SDS, azide, and thimerasol.
[0317] On the day of testing, the prepared conjugate was mixed 1:1 with a buffer solution containing 1% Tween® 20. Importantly, the solution was tested within 60 minutes of preparation. The test card was cut into 5 mm dipsticks and only the top wick of cellulose was attached (minimum 2 mm overlap). Using a 96-well plate, 20 μL of the prepared conjugate was combined with 20 μL of the target antigen in buffer. A half dipstick was added and allowed to run to completion (i.e., when the wells were dry). The test strips were read on an exemplary device reader system (in this example, Compact or RapiPlex, depending on the immunoassay device configuration) that measured the test line signal. Additionally, the strips were inspected to note that (1) there was no "meniscus" line at the sample port, which is a possible sign of conjugate collapse, and (2) the overall background was not highly stained, which is a possible sign of insufficient detergent blocking the buffer recipe of the conjugate.
[0318] Similar to the EIA, here each antibody was tested as both a test line and a detector to identify the optimal pair. Further testing of sample diluents (salts, pH, detergents and additives), test line concentrations, and detector concentrations were also tested to characterize each antibody pairing. At least one pair of antibodies was identified that detected the target and showed an increase in signal test line that correlated with increasing concentrations of antigen in the sample well. Additional test chemistry rounds on half dipsticks were performed to confirm baseline sensitivity and antibody specificity in the LFA format.
[0319] After the complete LFA:half dipstick, the next step was to consolidate / dry all drugs present on the test strip and create the assay in the appropriate volume, test strip material, material layering and timing as needed for the final product requirements (e.g., target range for a given assay, known cross-reactive targets, known concentration limits in both healthy and disease states, etc.).
[0320] Conjugate pad preparation in full LFA: The liquid conjugate preparation was scaled up from the half dipstick step such that the conjugate was made in a volume sufficient to concentrate the conjugate stock to a higher concentration, dried in the conjugate pad material to achieve the appropriate dry concentration, and upon rehydration during assay performance, measurements were made according to the design and parameters disclosed herein. In the half dipstick step, 20 μL of conjugate was used for testing, whereas in the dry strip format, the material used to hold the conjugate can only hold a volume of about 10 μL. The liquid conjugate stock containing the concentrated material should be stored refrigerated. The conjugate was stored refrigerated and inspected again for OD and visual clarity prior to testing. Any solution with a change in OD, visual clarity and uniformity of the liquid conjugate of more than 10% indicates that the conjugate recipe is not stable and should not be advanced for testing.
[0321] The conjugate pad material was either glass fiber or polyester based. When tested, denser materials were not used as they did not release all of the conjugate within the required assay time. The polyester blend material is hydrophobic and requires pretreatment before the conjugate is sprayed onto the pad. The polyester pad was soaked in excess buffer containing detergent. An optional component for the assay development performed at this step was to evaluate the pre-soaked conjugate pad glass fiber included to introduce additional detergent, buffering capacity, and blocking proteins to the test chemistry (i.e., the set of reagents dried onto the conjugate pad). The conjugate was prepared in the spray buffer containing a sugar that was determined to aid in the release of the conjugate from the pad. The specific sugar and % w / v content were optimized for each assay.
[0322] Nitrocellulose Membranes: Nitrocellulose (NCE) membranes were prepared for half-dipstick analysis as described herein. Line placement relative to sample port, sample pad and conjugate pad dimensions and material density were evaluated as part of the complete strip parameters including flow rate. Line locations were located within the "read window" of the detection platform. At least 2 mm spacing was used between consecutive test lines to provide sufficient clearance for proper measurement (e.g., accurate / optimal detection of visible assay components). Test lines were printed at 1 μL / cm or less to achieve sharp, crisp test lines.
[0323] Other Pads: Sample pad preparation was optimized for each sample type (e.g., whole blood, urine, plasma, etc.). For use with blood samples, a means to capture red blood cells was added (e.g., anti-RBC antibodies). For use with urine, the buffer volume was adjusted to normalize the urine pH and filter any cellular debris and / or proteins that may be present in the urine sample. The top wick is a sink pad layered on the test strip furthest from the sample port and is designed to have material and overlap on the NCE membrane such that the flow rate of the sample (e.g., blood, urine) is maximized through the test strip, while providing a means for the detector to be removed to maximize test line signal emission.
[0324] The final sample matrix configuration: test reagents, nitrocellulose membrane flow rate, sample volume and pad chemistry were all tested and then iteratively optimized to maximize the signal:noise and sensitivity of the test.
[0325] Once the test configuration was developed, the next step was to validate that the performance of the test was reproducible across multiple feed formulations.
[0326] Example 2B: Assay Method The sample was applied into the sample port of the test cassette using the provided disposable transfer pipette. Timing is very important and samples should be applied to the cassette as soon as possible; specifically, within 1 hour of collection and no more than 5 hours of holding on ice until the sample is applied to the cassette. The time the sample is at ambient temperature should be very limited to ensure accuracy of the measurement / reading. If testing on freshly isolated samples is not available, samples can be measured after storage if sample handling / workflow is optimized before and during storage. This includes minimum time at room temperature, rapid processing of the sample (e.g., into plasma), and transport to storage (-80°C) until ready to be evaluated on the cassette as described herein. After thawing, pre-frozen samples (e.g., plasma, urine, saliva, etc.) should be read immediately.
[0327] After application, the sample was rehydrated on the strip, including the labeled detector that was added during striping and cassette assembly. The target in the sample reacted with the labeled detector. In some versions of the assay where the sample included whole blood, the red blood cells were retained on the sample pad, for example, by using an anti-RBC antibody applied to or included in the sample pad. In other versions, the "excess" target, which, if present, saturates the signal and is a portion of the target if it exceeds the ULOQ of the test line, reacted with a competitor to remove the "excess" from the sample. The target-detector complex then migrated onto the NC solid phase and over the test line and control line capture zone(s). The test line contained a target-specific antibody (i.e., capture agent) that captured any gold-labeled anti-target antibody-target complex in a sandwich immunoassay format.
[0328] The test cassettes were allowed to sit for 10-30 minutes to allow the assays to develop. The exact test protocol corresponding to the sample and test panel was then selected on the user interface of the reader system (see, for example, WO2013 / 014540 for an exemplary reader system). The test cassette was placed in the reader system. Sample identification was entered (via the integrated test entry device or an external barcode reader for barcoded cassettes). The system then performed a scan of each test strip and calculated assay results (i.e., measurement of one or more targets). Results were displayed on the screen and automatically saved. A standard response curve was generated for each assay. This curve characterizes the response of the assay to a range of concentrations of the relevant target in the selected matrix. The curves were generated by assaying multiple replicate samples at a particular target concentration and fitting a mathematical function to the response. With reference to these curves, a quantitative measurement of the target concentration may then be estimated on samples with unknown amounts of each target. Control samples are not run with each test. Rather, there is a QC cartridge that confirms that the machine is operating correctly. This cartridge does not require adding sample to run, just place it in the machine and run the QC check (~1 min). A "pass" result confirms that the machine optics are working properly. Other control steps for the assay method disclosed herein include that each strip is internally calibrated. Specifically, during manufacturing, a QC file specific to the batch of cassettes is created, the fluidic control lines are controlled by test line / background intensity, quality thresholds must be reached for the control lines that correspond to the batch qualification file (this is built into the barcode QC batch file), and the QC batch file will notify if the cassette has been loaded too long and / or the quality of the sample (based on background).
[0329] Tests are also being conducted to determine how long it can take for the strips to dry so that the signal is affected and the results altered.
[0330] An exemplary protocol for compact detection of sC5b-9 in blood or urine is as follows.
[0331] Comp act sC5b-9 urine Materials needed:-Comp act sC5b-9 Urine;Rapid Test (Single Use, Duplicate, Room Temperature);Steps:1. Remove the duplicate Comp act sC5b-9 Urine Rapid Test and place on a flat and level surface;2. Pipette 100μL of pure urine sample into the sample port of each cassette (2 in total);3. Incubate the rapid tests for 30 minutes ± 1 minute at room temperature (15℃-25℃);4. Record the kit ID (lot number, expiration date, location) on the CRF;5. Finish at 30 minutes, reader was previously on and select sC5b-9 Urine Quant test in the Comp act reader; Scan the target barcode;6. Place the cassette in the reader drawer and close the test cassette drawer and read; Record the test result pass / fail;7. If the test result is "Fail", re-run the cassette. 8. Duplicate the cassette and repeat steps 5-6.
[0332] Comp act sC5b-9 blood Materials needed:- Testing equipment (single use, duplicate, room temperature);- Sample dilution tubes (refrigerated until single use); Steps: 1. Equilibrate sample diluent to room temperature. ;2. With subject blood sample, pipette 20 μl blood into dilution tube. Close lid and mix thoroughly for 1:20 dilution ratio. ;4. Remove duplicate Compact act rapid tests and place on a flat, level surface. ;5. Pipette 100 μL diluted sample into sample port for each cassette. ;6. Incubate rapid tests for 30 min ± 1 min at room temperature. ;7. Record kit ID (lot number, expiration date, location) on CRF. ;8. Finish at 30 min, reader was previously on and select sC5b-9 test in Compact act reader. Scan subject barcode. ;9. Place cassette in reader drawer, close test cassette drawer and read. Record test result pass / fail. ;10. If the test result is "Fail", re-run the cassette. ;11. Duplicate the cassette and repeat steps 8-9.
[0333] Certain caveats, precautions, and / or limitations should be kept in mind when carrying out the assays as disclosed herein. In particular, the following should be considered: -Perform the replicate test at room temperature (15°C to 25°C). - Standard precautions for handling infectious agents must be observed. -Wear standard personal protective clothing when handling specimens and assay reagents in accordance with local regulations. -One specimen per cassette. Each cassette is single use and cannot be reused. Once a cassette is loaded, it can be discarded in clinical waste. - The cassette must be used within 30 minutes of being removed from the foil. -Do not adjust the volume of samples or pre-aliquoted samples. -Changes in procedure may invalidate results.
[0334] The samples can be detected using a reader system such as a Compact or RapiPlex detector (see, for example, US9199232 for a description of a RapiPlex cartridge having six channels).
[0335] Example 3: Proof of concept for loss of signal titration in the presence of abundant target This example provides a method for measuring the levels of one or more targets in a sample over a wide dynamic concentration range without diluting the sample prior to measurement. This example overcomes some of the shortcomings of conventional methods using a combination of approaches as described herein. This example describes an innovative method for analyzing and quantifying one or more targets in a fluid compared to other analytical methods.
[0336] As a proof of concept for the method developed in this example, plasma purified C5 was spiked into sample buffer and compared to samples containing C5 and a C5 binder (anti-C5 antibody). As can be seen in Figure 7A, in sample buffer with C5 (left panel), titration of detectable signal over the measurement range of 0-10 μg / mL was not achieved as the peak signal intensity of the test line did not change with varying C5 concentrations, demonstrating the challenges associated with assaying high abundance targets. In sample buffer with C5 and anti-C5 antibody, the peak signal intensity of the test line varied more with different concentrations of C5, demonstrating that without a binder of free C5, no concentration differences were detected, even though the concentrations were clearly controlled initially, and thus concentration-dependent titration was still not achieved (right panel). These results demonstrate the challenges in assaying with high abundance targets, specifically showing that high levels of C5 can prevent titration of signal over a certain concentration measurement range, which can present a challenge when trying to determine clinically relevant values of the target. The techniques described herein help overcome this challenge, providing an assay capable of detecting targets that may be present at high concentrations in a given sample, thus providing a reliable, sensitive, accurate, reproducible, trustworthy, rapid and specific method for measuring targets. As seen by the concentration-dependent titration of target levels, Figures 7B and 7C, a multi-line approach was utilized to overcome the saturation caused by high abundance targets, ultimately resulting in accurate measurements of free C5 versus therapeutic-bound C5, respectively, demonstrating successfully overcoming the challenge shown in Figure 7A.
[0337] Compared to previous assays with a limit of detection of 3.1 ng / mL (e.g., the Hycult assay, where the lower limit of quantification is unknown and ranges from 3.1 to 200 ng / mL), the present assay has an LLOQ of 0.001 µg / mL with a range of 0.001 to 100 µg / mL.
[0338] Example 4: Modified lateral flow assay for detecting abundant targets in undiluted samples To overcome the challenges based on the inability to detect differences in the concentrations of abundant targets, an updated detection method was developed, where a lateral flow assay was modified to improve various aspects and develop an assay that can accurately detect and measure abundant targets in a sample.
[0339] Multi-line detector elements on solid support improve dynamic test range and eliminate the need to dilute samples First, an assay using multiple detector lines was developed. In this assay, multiple detector lines were placed on the solid phase over which the sample flows ("striping"). These detector lines provide a way to absorb "excess" target in the sample (i.e., an amount of target large enough to distort the results of the assay). By absorbing an amount of target in at least the first detector line, subsequent detector lines can be used to accurately and reliably detect and quantitate the target. Figure 3 shows the multiple test line configuration of an exemplary test strip used in this assay.
[0340] The validity of multiple test lines as shown in Figure 3 was demonstrated by spiking C3 into sample buffer and then performing seven-fold serial dilutions. The concentration of C3 in each dilution was then assessed using a multi-line, multi-detector LFA test strip.
[0341] As shown in FIG. 8, test line 1 is saturated in all samples (i.e., "reads" as if the same concentration of C3 was present in all samples). Test line 2 is slightly less saturated but does not clearly distinguish between different concentrations of C3. However, lines 3 and 4 show that the test line intensity signal decreases in the presence of decreasing C3 concentrations. This demonstrates that an accurate and sensitive quantitative assay can be performed by using multiple test lines as a way to remove "excess" target to allow accurate measurement of the concentration in the sample without diluting the sample prior to measuring the target. The increased surface area of the solid support improves accuracy and dynamic test range and eliminates the need for sample dilution As an alternative, or in addition to the multi-line LFA, another approach used to accurately measure "high concentration" targets (without the need to dilute the sample), as shown in Figures 6A and 6B, was to improve the sensitivity of the test strip in the LFA, but in a way that did not impede the flow or function of the LFA. In this assay, two types of detection beads were compared; 60 nm gold beads and 400 nm polystyrene beads. Samples spiked with low concentrations of C5 were tested in LFAs with multiple lines and either 60 nm gold or 400 nm polystyrene beads. LFAs with larger beads were better able to distinguish differences in high abundance target concentrations than those with smaller beads (see Figure 6B). The larger beads improved the range over which targets could be accurately and quickly measured without compromising the speed or detectability of the targets. The combination of the increased surface area of the beads and the multi-test line approach improved the measurement of high concentration targets to a much greater extent than had been expected, increasing the dynamic range of detection of the targets. A similar assay was performed with C3, with similar results (data not shown).
[0342] Reduction of the prozone effect by the addition of competing drugs During assay development, prozone effects were occasionally observed. To reduce the prozone effect, a competitor was introduced into the assay system to bind to the high concentration target in the undiluted sample. This approach was tested in two ways: (i) adding free antibody to the conjugate pad, and (ii) adding free antibody to the detector before striping.
[0343] (i) Free antibody on the conjugate pad Unlabeled C3 antibody was added to the conjugate pad at 35 nanograms, followed by a sample of purified serum C3 in assay diluent. As can be seen in the results shown in Figure 9, the addition of a competing (i.e., unconjugated, unlabeled, unbound to the support, etc.) agent to the conjugate pad improves the accuracy of the assay, allowing the amount of C3 to be detected and quantified with greater sensitivity over a larger range.
[0344] (ii) Competitor added to the line In this assay, a competitor (e.g., unlabeled antibody at a final dilution of 1:20) was mixed with the diluent prior to adding the diluted sample to the LFA. This effectively converts the competitor into a capture agent, but it is used to dilute a portion of the target out of the sample, not for measurement. A competitor was also added to the conjugate pad. As shown in Figure 10, the addition of a capture agent to multiple test lines improved the accuracy and sensitivity of iC3b measurements in combination with a competitor in the diluent, compared to measurements without a competitor.
[0345] Thus, as demonstrated herein, the addition of a competitor to the conjugate pad and / or test line ("stripe") on a test strip can reduce or eliminate the prozone effect and improve the accuracy and range of target detection in an assay.
[0346] Finally, in some assays, it was observed that the sample was either stuck or not flowing onto the membrane / into the cassette as expected. Further investigation revealed that the sample was indeed "stuck" on the test strip, resulting in inaccurate concentration measurements. Replacing the NC membrane with a solid support with a higher flow rate increased the rate at which the sample entered and flowed onto the test strip, improving accuracy. Overall, as shown in Figure 11, changing the membrane, and therefore the sample flow rate, reduced the test line concentration by roughly 30%.
[0347] Thus, as described in this example, each feature, alone or in combination with one or more other features, provides an assay that can measure high concentrations of a target in a sample without diluting the sample prior to measurement, something that has not previously been achieved by a single assay.
[0348] Example 5: Measurement of free C3 This example describes the evaluation of an exemplary target, C3. First, donor plasma was spiked with increasing concentrations of an exemplary C3 therapeutic (C3 binder). As shown in Figure 12, plasma was spiked with increasing concentrations of C3 binder, incubated at 37°C for 60 minutes, and then measured on a Compact system using a C3 LFA rapid test manufactured according to Example 1 of the present disclosure.
[0349] As shown in FIG. 12, increasing concentrations of C3 binders correspond to decreasing concentrations of free C3. That is, increasing the concentration of therapeutic agent reduces the concentration of free target (C3) in the plasma sample. Furthermore, offline dilution of the sample may generate artificial levels caused by dissociation of endogenous C3 from the C3 binder. The techniques of the present disclosure provide techniques that overcome these challenges, so that results from the assays described and exemplified herein can be used by clinicians to influence patient treatment. The approaches described herein stabilize the binder:C3 interaction, allowing for accurate measurement of "free" C3 versus binder-associated C3 (e.g., "drug-bound" C3, if the C3 binder is a C3-binding therapeutic).
[0350] The approach used in measuring C3 can be translated and applied to other proteins in the complement system, as well as cytokines and other biomarkers present in samples that can be analyzed without dilution (e.g., blood, plasma, urine, etc.).
[0351] Example 6: Measurement of sC5b-9 in urine Measuring a particular target, especially in a particular type of sample, can be problematic. For example, measuring sC5b-9 in urine can be very useful and an important predictor and / or indicator of disease, disorder or condition activity, or risk of a disease, disorder or condition. However, measuring sC5b-9 in urine is generally problematic for reasons such as low target levels that are not accurately measured (for blood) by current methods such as ELISA (Figure 13), because the lower limit of quantification / detection is too high to detect a particular level of target in a particular sample, even at the theoretical LLOQ, and such assays are also optimized for blood and / or plasma rather than urine (see, e.g., Quidel ELISA with LLOQ of 8.8 ng / mL, published sandwich ELISA of 2.2 ng / mL using Dako antibodies, BD C5b9 ELISA, range of 0.469 ng / mL to 15 ng / mL, etc.). Additionally, a method to normalize for urine volume is needed.
[0352] To overcome this challenge, creatinine measurements were added to the assay to normalize urine concentrations. Furthermore, such traditional types of assays do not facilitate the turnaround time required for point-of-care analysis, which is an important feature for tests monitoring many targets, including sC5b-9. Finally, given that levels of target in urine may be low (e.g., compared to blood, plasma, etc.), having an assay that does not require one or more wash steps (as required by ELISA) is important to minimize loss of sample, target, etc.
[0353] Problematically, traditional tests for measuring one or more targets in blood or plasma (e.g., ELISA) do not perform accurately in urine due to the sample matrix in those tests, and furthermore, the difference in urine volume (and, e.g., target concentration) compared to the blood or plasma volume used in those assays requires normalization for interpretation. However, even in blood, tests may require significant off-line dilution or several serial dilutions to obtain measurements within the test range of 100-100,000 ng / mL. In contrast, the technology disclosed herein has developed an assay with improved sensitivity and specificity, including a lower limit of quantification of sC5b9 at 1 ng / mL while simultaneously maintaining a measurement range of 1-100,000 ng / mL.
[0354] This embodiment overcomes these challenges by developing an assay that can accurately measure one or more targets in undiluted urine samples. For example, in urine, sC5b-9 can be present at 5 ng / mL to 200 μg / mL. That is, as will be appreciated by those skilled in the art, in a "disease" state, sC5b-9 can be detected at a concentration of 200 μg / mL, but in the absence of a disease state affecting sC5b-9 levels, the concentration may be well below 250 ng / mL, or as little as 5 to 30 ng / mL.
[0355] In this assay, the detection limit of sC5b-9 was extended. Specifically, in previously available assays, sC5b-9 is often under-reported, either in presence or concentration. This assay recognized that sources of problems in measuring sC5b-9 in previously available assays include narrow limits of quantification, incompatible pH between different samples (e.g., blood and urine), and differences in sample volume and concentration. In particular, differences in sample volume and concentration are problematic for urine samples, which may cause differences in the concentration of one or more targets that were not accounted for in measuring sC5b-9 in previously available assays. This embodiment not only recognized the sources of such problems, but also developed solutions to those problems.
[0356] Thus, in some versions of the assays described herein, to measure targets in urine, a pad was added between the detector and the NC to allow for mixing / diffusion of the sample / detector before reaching the NC for urine-based assays (see, e.g., Tsai, et al. Scientific Reports, (2018) 8:17319, and Lu, et al., PNAS, December 19, 2017; 114 (51); 13513-13518, each of which is incorporated herein by reference in its entirety). Here, an assay was developed to detect targets in undiluted urine samples. The sample buffer was modified by determining and optimizing a pH that stabilized the urine sample and enabled measurements in a more efficient, accurate, specific, reliable, sensitive, and / or rapid manner than previously available assays. That is, the pH of the sample was stabilized / optimized in the sample pad.
[0357] For sC5b-9 assays involving samples that do not include urine, the buffer chemistry may be different, i.e., for a given cassette, the buffer chemistry will depend on the assay and antibody / matrix used, such that the buffer chemistry for urine will differ from that in assays measuring one or more targets in blood. For example, when whole blood samples were applied, a red blood cell filter was used that has a mechanism for trapping red blood cells (e.g., anti-RBC antibodies). For urine samples, the sample pad was optimized to buffer over a range of urine pH levels.
[0358] In multiplexed assays (e.g., performed using a RapiPlex reader, see, e.g., WO2013 / 014540, incorporated herein by reference in its entirety), buffer chemistry can be changed between channels allowing optimization of each channel and multiplexing of tests that were previously or otherwise incompatible with each other. Additionally, the assay was improved by doubling the detector concentration and adding multiple lines on the test strip (see FIG. 2B, showing results from a test cassette with a test strip containing four test lines). Increasing the detector concentration resulted in a significant improvement in the sensitivity of target detection and quantification, but the increased sensitivity of target detection improved the lower limit of quantification but compromised the upper limit of quantification (i.e., improved LLOQ but adversely affected range due to saturation). Detector concentration per test was not found to be a limiting factor in the assay. In fact, increasing the detector concentration increased background signal and masked test line signal, adversely affecting sensitivity. In order to be able to detect lower levels of concentrations as well as higher levels (i.e., close to ULOQ) without dilution, an additional test line was added to the test strip that previously contained only a single line (see, e.g., FIG. 2B). Thus, the detection of sC5b-9 range in urine samples was expanded. In comparison with the previously available assays, samples that were reported as not having any sC5b-9 in the previously available assays showed positive results for measurement (i.e., detection and quantification) with the assay of the present disclosure (see, e.g., FIG. 2B).
[0359] Finally, in addition to the sC5b-9 assay, we also performed a creatinine assay with each sample; creatinine also serves as an important normalizer for urine volume in the LFA. This assay is also advantageous in that there was no loss of material during testing compared to traditional ELISA tests, such as the commercial test shown in Figure 13, since it does not require any washing steps. This approach allows for the measurement of low levels of sC5b-9 (e.g., 5-30 ng / mL), which were previously undetectable by any previously developed or currently commercially available assays.
[0360] Here, urine samples from 12 healthy volunteers were evaluated for sC5b-9 with the LFA assay developed herein, run on the Compact system, and the results were compared with those from a standard commercial ELISA kit. As shown in Figure 13, sC5b-9 was detected in the urine of all 12 samples using the LFA assay developed herein, whereas only two samples showed detectable sC5b-9 in the urine using the commercial ELISA kit.
[0361] As also shown in FIG. 13, sC5b-9 and creatinine are measured in the same sample using the Compact system, which does not allow the use of undiluted samples in an ELISA assay that can measure only one specific target per well and part of the sample. The assay described in this example shows an improved detection range of sC5b-9 in urine, e.g., 0.5ng / mL to 10μg / mL, compared to commercial assays, e.g., Quidel, with a range of 8.8ng / mL to 190ng / mL. As described herein, there is no prozone effect in the disclosed assay at concentrations up to 200μg / mL. In addition to such a significant improvement in detection range, the detection of two different targets (e.g., sC5b-9 and creatinine) in the same sample also supports the development of multiplexing of two or more targets on the RapiPlex system. The ability to use undiluted samples allows for detection of a broad range of sC5b-9, enhancing its usefulness in clinical settings where patients may have a variety of different conditions or levels of one or more targets, and this improved range of sC5b-9, along with the improved range and ability to detect and quantify other targets from the same sample without the need for additional steps such as dilution, improves efficiency (and speed of results) and also reduces the risk of error or artifacts (e.g., from dilution) that may be present in other systems that require, for example, dilution or multiple sample inputs.
[0362] The breadth of the test range was also determined and improved using laboratory prepared samples, and the assembled cassette was tested with high concentrations prepared from sC5b-9 buffer QC panel (P / N3010) and C5b-9 antigen (P / N1165) in TBS casein 0.1% T20 (P / N2066). The addition of multiple lines to the test strip further improved the test range capability, as shown in Figure 14. Samples were quantified from 0 ng / mL to 200 μg / mL.
[0363] Combining the increased detector concentration with multiple test lines results in an assay with a dynamic test range of 0.5 ng / mL to 100 μg / mL, and an upper range of quantification of 10 μg / mL to 100 μg / mL. It was also determined that at concentrations up to 200 μg / mL, no prozone effect was observed. These improvements are paramount to the function of the assay with undiluted samples, and demonstrate that undiluted urine is a viable indicator of a critical target that can be used to monitor a subject's clinical status in situations such as therapeutic monitoring in real time (e.g., during treatment, clinical trials, etc.). That is, importantly, as described herein, this example illustrates the creation of an assay with a high negative predictive value, thereby ameliorating problems associated with false negatives in previously available assays. Such improvements would increase the likelihood that patients in need of treatment will receive timely and accurate treatment, rather than not receiving treatment due to inaccurate (e.g., false negative) target measurements.
[0364] Example 7: Improved measurement of ADAMTS13 This example illustrates the ability to rapidly, specifically, sensitively, reliably, and accurately measure ADAMTS13 in a sample. ADAMTS13 is an enzyme that cleaves VWF, which is involved in blood clotting. Importantly, deficiencies in ADAMTS13 activity can cause a reduction or loss of cleavage ability, resulting in blood clotting deficiencies. Such deficiencies can be inherited or acquired, and regardless of the etiology of the deficiency, a timely and accurate diagnosis is paramount to receiving appropriate (and often life-saving) treatment. For example, a reduction in the activity of ADAMTS13 can indicate that the sample is from a patient with TTP, the treatment for TTP being plasma exchange, which, if delayed, can have fatal consequences. However, TTP can also have similar symptoms to aHUS, and if a patient with aHUS has plasma exchange due to an inaccurate diagnosis, it can actually be harmful to the patient and also cause a delay in receiving appropriate treatment. Thus, an assay that can reliably, accurately, specifically, rapidly, and sensitively measure ADAMTS13 activity as described herein provides a solution to an unmet need in the field.
[0365] The assay measures the activity of ADAMTS13 on the cleavage of VWF, so that ADAMTS13 activity can be measured in any sample containing VWF (e.g., any genotype, e.g., plasma or whole blood). Here, the cleavage of recombinant VWF was measured (using the Compact system and the reader system). This rVWF fragment is 175 amino acids long and contains a 6-histidine tag at the C-terminus for use in ADAMTS13-mediated cleavage studies. After the sample is combined with the rVWF substrate, the C-terminal cleavage fragment is measured in the sample, and the capture and detection agents (anti-C-terminus antibody and anti-his tag antibody) are added to the immunoassay device, including a labeled antibody that specifically recognizes the C-terminus cleavage fragment but not uncleaved VWF, and also an antibody that does not capture or recognize the N-terminus cleavage fragment and recognizes the 6his tag on the C-terminus fragment. In this example, the 6his tag antibody was the detection agent and the C-terminus antibody was the capture agent, but the competitive / capture and detection agent binding partners can be reversed. N-terminal fragments are not, and will not be, measured; they pass through the solid phase of the assay, are not captured, and do not react with the detection agent and / or competitor.
[0366] To measure ADAMTS13, 50 μl of sodium citrate plasma was added to the tube labeled "VWF cleavage reaction" (this tube contained 2 μg / mL recombinant VWF in CaCl2 buffer (50 μl volume)). This was then mixed with a pipette and incubated at 37°C for 10 minutes. Any ADAMTS-13 in the sample (depending on the activity level (ranging from less than 10% to 100%)) cleaved the rVWF. After incubation, 2 μl of "termination solution" (containing 0.5 M EDTA) was added to the cleavage assay reaction tube to terminate the cleavage reaction. EDTA chelates the activity of the ADAMTS-13 enzyme, thus stopping further cleavage during the next step. 30 μl of solution from the VWF cleavage reaction tube was added to the ADAMTS-13 sample dilution tube and mixed thoroughly by pipetting (1 in 10 dilution). 100 μl of solution from the ADAMTS-13 sample diluent tube was pipetted into the sample port of the ADAMTS-13 activity cassette and incubated at room temperature for 30 min ± 1 min. A polyclonal goat Ab for cleaved / intact VWF was used as the capture agent (i.e., to capture the C-terminal cleavage fragment) and a mouse monoclonal Ab specific for a cleaved VWF neo-epitope was used as the detection agent. An internal control for ADAMTS13 was added at different ranges to develop appropriate concentrations for competitor, capture, and detection agents. That is, recombinant ADAMTS13 was used to establish the activity range for this assay, which also provided data to establish high and low control conditions / ranges depending on the amount of recombinant ADAMTS13 added to the system.
[0367] Although initial assay results showed cross-reactive antibodies between the C-terminal fragments and uncleaved VWF, further development was undertaken and a highly specific assay was developed. Data collected on the final version of this assay (not shown) indicate that measurements using C-terminal specific antibodies successfully recognized only cleaved VWF. These data are obtained in a much more rapid and direct manner than any previously available assay. That is, the assay of this example takes up to approximately 40 minutes, whereas a commercial ELISA takes 3 hours and requires much more handling and sample processing, and a commercial fluorometric assay requires 1 hour as well as additional handling and measurement steps, neither assay being available as a point-of-care test. Here, the only additional step is a pretreatment incubation of the sample with rVWF substrate, which takes 5-10 minutes, before applying the sample to the test cassette of the present disclosure to measure ADAMTS13 activity levels. Thus, multiplexing of this ADAMTS13 assay is also not an issue since the sample dilution is approximately 1:10 to 1:20 (i.e., in this example, a 1:1 cleavage assay step followed by a 1:10 buffer dilution step is performed, and furthermore, the buffer used for samples including blood and plasma is compatible with samples combined with the rVWF substrate; therefore, when the rVWF incubation substrate is applied to the test cassette of the present disclosure, one or more additional targets (except cleaved rVWF as a surrogate for ADAMTS13 activity) can be measured according to the contents and capabilities of the particular test cassette used.
[0368] In an assay according to this example, samples from subjects without a disease, disorder, or condition that affects ADAMTS13 activity are expected to give a "strong" test line due to high VWF cleavage, i.e., at least 50-68% activity. In contrast, subjects with TTP are expected to have approximately 10% less ADAMTS-13 protein or activity compared to subjects without TTP, and thus induce minimal cleavage, and thus a "weak" or absent test line.
[0369] In developing this assay, it was important to determine whether endogenous ADAMTS13 (i.e., ADAMTS13 in a sample from a subject) could cleave rVWF. Several optimization experiments were performed to verify whether plasma samples would require additional conditions (e.g., pH, salt, temperature) for successful and accurate cleavage activity. To confirm, tests of healthy plasma (e.g., from subjects not known to have a disease, disorder, or condition that would affect ADAMTS13 activity) were incubated with rVWF at increasing plasma concentrations, and it was found that VWF cleavage increased proportionally depending on the concentration of endogenous ADAMTS13 in plasma.
[0370] Antibody characterization was performed on 6-His tag and rVWF antibodies to determine which antibodies could accurately quantify ADAMTS13 activity and distinguish between cleaved and uncleaved rVWF. Additional conditions such as pH and chelating agents (e.g., EDTA, sodium citrate) were tested and compared to determine optimal assay parameters for measuring ADAMTS13 activity. Thus, this example provides a proof of concept for successfully measuring ADAMTS13 by detecting cleaved rVWF on an assay using both spiked plasma samples or samples from subjects, and the assay provides results in 40 minutes or less with minimal pre-treatment steps from sample collection to target measurement.
[0371] ADAMTS13 measurements are reported as a percentage of "normal". If ADAMTS13 activity is measured below 10% in a sample from a subject suspected of having TTP, the TTP diagnosis is confirmed. If ADAMTS13 activity is between 10-30% in a sample from a subject, the patient is at risk of having or developing TTP, or is susceptible to it, and in such a situation, a differential diagnosis and / or additional testing to determine whether any inhibitors, such as autoantibodies against ADAMTS13, are present or other conditions or factors contribute to the measured ADAMTS13 activity level would be indicated. If a sample from a subject has ADAMTS13 activity above 30% (clinically suspected to have aHUS or TTP, the patient is diagnosed with aHUS).
[0372] If a patient has, is susceptible to, or is at risk for complement-mediated TMA, ADAMTS13 activity should be measured; if ADAMTS13 activity is less than 10%, the patient is suspected or diagnosed with TTP; if ADAMTS13 activity is 10-20%, the patient is suspected of having TTP; however, in some circumstances, and as will be understood by those skilled in the art, additional clinical judgment or further testing and / or monitoring should be performed in patients with ADAMTS13 activity levels of about 10-20% (see, e.g., the guidelines for diagnosing TTP in Zheng et al., J Thromb Haemost. 2020;18:2486-95, which is incorporated herein by reference in its entirety). If the patient is diagnosed with TTP, treatment includes plasma exchange. If the patient is diagnosed with aHUS, treatment does not include plasma exchange.
[0373] Example 8: Measurement of low abundance targets This example describes the evaluation of an exemplary cytokine, IL-6. First, 19 undiluted donor plasma samples (previously collected and stored at -80°C) from patients with RA, lupus, or psoriasis were measured on the RapiPlex system according to Example 1 of the present disclosure.
[0374] Using strips and cassettes manufactured according to Example 1 herein, concentrations as low as picogram amounts of IL-6 can be detected. The "normal" reference range for plasma IL-6 is considered to be 1.8 pg / mL or less. In conditions such as septic shock, levels up to 11,062 pg / mL have been reported (with a median of 1378.6 pg / mL), and in sepsis, with a median of 89.9 pg / mL. The RapiPlex system has six channels, each capable of accommodating up to four different tests, allowing for separation of "low" and "high" abundance targets to ensure accurate measurements. Additionally, each channel can be optimized so that all tests within a channel function optimally without interfering with any of the other channels. As shown in FIG. 15, IL-6 was detected at levels ranging from 0 to 800 ng / mL in 18 of the 19 samples tested. Because this testing was performed on the RapiPlex platform, it is also shown that measurement of low concentration (e.g., pg or ng / mL) cytokines (e.g., IL-6) can be measured using multiple visualizeable channels (e.g., the LFAs described herein) using undiluted samples, and can be combined with multiple other targets, such as high concentration (e.g., mg / mL, e.g., C3) targets on a single test cassette having multiple test strips, each with multiple test lines, such that proteins within the complement system, as well as cytokines and other biomarkers present in a sample, can be efficiently, accurately, sensitively, specifically, efficiently, and / or reliably detected and analyzed without dilution (e.g., blood, plasma, urine, etc.).
[0375] This provides multiple readouts from a single small undiluted patient sample, improving overall efficiency, speed, accuracy, sensitivity, specificity, and reliability for unparalleled patient monitoring in a variety of environments (e.g., clinic, home, etc.) The presence and concentration of IL-6 was measured in undiluted plasma of the sample within 30 minutes of reconstitution.
[0376] Example 9: Multiplexing of high and low abundance targets This example describes the evaluation of exemplary targets that typically occur at concentrations that differ by an order of magnitude (or orders of magnitude). As described herein, the techniques provided by the present disclosure allow for the complexation of targets that would traditionally require different assays. For example, the apparatus of the present disclosure can multiplex up to 24 targets in a single sample / single test cassette with up to six assay channels read on a single scan (i.e., on a RapiPlex reader). Thus, the system allows for the complexation of up to four targets with similar assay chemistry and / or similar target working / detection ranges in each of the six channels, eliminating the need for, e.g., multiple tests on multiple aliquots from a single sample, or, e.g., more than one test of a single target in a single sample, to ensure accurate measurements). Such a system increases the efficiency, accuracy, sensitivity, specificity, reliability, and / or speed of detection of multiple targets from a single undiluted sample (or portions thereof). Furthermore, measuring all targets simultaneously provides levels of multiple targets in a sample without complicating effects of, e.g., time-dependent changes, assay reagents / materials, or crosstalk (e.g., between reagents used to measure detection agents, e.g., competitors, e.g., buffers, etc.) that would affect the concentration of the targets (actual or detected) if, for example, measurements were performed at separate time points and / or in separate assays from a single sample.
[0377] In this example, multiplexing of targets, typically high and low abundance targets (e.g., detected in mg and pg amounts, respectively), is measured using a single sample and a single cassette with multiple test lines on a test strip, where undiluted samples are tested for the presence and amount of C3 and IL-6 using an LFA rapid test comprising a test strip having test lines capable of detecting C3 and IL-6, manufactured according to the present disclosure (see, e.g., Example 1). The presence and concentration of C3 and IL-6 are determined in undiluted samples (eg, plasma and / or blood) within 30 minutes.
[0378] Example 10: Multiple lines for improved target specificity This example illustrates overcoming the lack of antibody specificity to specifically and accurately detect and / or quantitate a target. As described herein, detection of a particular target may be inaccurate and / or non-specific due to the lack of antibody specificity.
[0379] Using the approaches described herein (see, e.g., Example 1), cassettes with multiple lines are generated where targets with known antibody specificity issues (e.g., factor B, C3, iC3b, etc.) are used to remove cross-reacting proteins using a first line that captures but does not detect the cross-reacting proteins. After capture is performed, the next line(s) are used to detect and / or quantify one or more targets.
[0380] Here, in one use of the multiple test line approach, and as a proof of concept demonstrated by FIG. 16A, Ba factor is analyzed by first capturing parental B factor protein in the first test line(s) of the cassette using anti-B / Bb factor antibody (M13 / 12) that cross-reacts with full-length B factor. This removes full-length B factor that contains Ba fragments and therefore cross-reacts with many Ba antibodies, causing inaccurate measurement of cleaved Ba (i.e., the target of this assay). The next test line(s) is striped to contain anti-Ba antibody (D22 / 3) as a capture component, which allows for specific and accurate detection of cleaved Ba, not contaminated by full-length / parental B factor protein.
[0381] To assess capture and detection specificity, sample buffer was run alone or spiked with increasing concentrations of purified factor Ba (1-1000 ng / ml) or factor B at 1000 ng / ml. Individual samples were applied to the sample port and the assay was allowed to develop for a 30 minute incubation period before placing the cassette into the Compact reader system. A dose-dependent increase in detection of factor Ba was demonstrated in the cassette (see Figure 16A) and quantified (see Figure 16B).
[0382] This approach can be extended to any complement protein that has cleavage products and antibodies available to detect whole, fragmented, and / or cleaved complement components.
[0383] Example 11: Multiplexing - Evaluation of iC3b, C3 and C4 This example describes the evaluation of an exemplary target that typically requires one or more initial lines to modify the undiluted sample for accurate measurement. As described herein, the technology provided by the present disclosure allows for target complexation that would traditionally have required different assays and operations, but instead uses a single undiluted sample and in situ modification of the sample to efficiently, accurately, sensitively, specifically, reliably, and / or rapidly detect and / or quantify multiple targets without sample dilution. As described herein, the device of the present disclosure can multiplex up to 24 targets in a single sample / single test cassette with up to six assay channels, each with four targets, read on a single scan (i.e., on a RapiPlex reader). If not all channels are utilized in a given test, redundant tests (e.g., same target on the same sample) can also be performed to improve reproducibility, accuracy, etc. (e.g., achieve CV<5%).
[0384] In this example, target multiplexing is measured using a single sample and a single cassette with multiple test lines on the test strip, where the undiluted sample is tested for the presence and amount of iC3b, C3, and C4 using an LFA rapid test containing a test strip with test lines capable of detecting each target (e.g., on a RapiPlex system) manufactured according to the present disclosure (see, e.g., Example 1).
[0385] The presence and concentration of iC3b, C3, and C4 are measured in samples within 30 minutes of the assay start time, as soon as possible, but not more than 5 hours after collection (samples are kept on ice), unless the sample has been previously collected and / or processed and / or frozen. Measurement of C3 and C4 generally requires multiple lines for absorption of excess target and competitor, whereas iC3b generally does not.
[0386] Example 12: Multiplexing - Assessment of iC3b, Ba, sC5b-9 and / or creatinine in whole blood and urine This example describes the evaluation of an exemplary target that typically requires one or more initial lines to modify undiluted samples for accurate measurement. As described herein, the technology provided by the present disclosure allows for target complexation that would traditionally require different assays and operations, but instead uses a single undiluted sample and in situ modification of the sample to efficiently, accurately, sensitively, specifically, reliably, and / or rapidly quantify multiple targets without sample dilution. As described herein, the device of the present disclosure can multiplex up to 24 targets in a single sample / single test cassette with up to six assay channels read in a single scan (e.g., on a reader device, e.g., a RapiPlex reader system).
[0387] In this example, target multiplexing is measured using a single sample and a single cassette with multiple test lines on the test strip, where the undiluted sample is tested for the presence and amount of iC3b, Ba, sC5b-9, and / or creatinine using an LFA rapid test containing a test strip with test lines capable of detecting each target manufactured according to the present disclosure (see, e.g., Example 1).
[0388] The presence and concentration of iC3b, Ba, sC5b-9 and / or creatinine is determined in the sample within 30 minutes of the assay start time. The sample reading system (e.g., RapiPlex) distinguishes between the creatinine line and that for blood-based assays. Detection agent(s) and / or competitor(s) will be added to the assay as appropriate for each target.
[0389] Example 13: Multiplexing - Evaluation of sC5b-9, IL-6, and iC3b in whole blood. This example describes the evaluation of exemplary targets sC5b-9, IL-6, and iC3b, which typically require different assays and operations to enable accurate measurement. As described herein, the disclosed technology allows for the evaluation of complement and cytokine targets from a single sample that would previously have required separate samples and assays for analysis. This multiplexing allows for the resolution of crosstalk between the two systems that was not previously possible. As described herein, the disclosed device can multiplex up to 24 targets within a single sample / single test cassette with up to six assay channels read in a single scan (e.g., on a reader device, e.g., a RapiPlex reader system).
[0390] In this example, blood was collected from healthy volunteers in sodium citrate tubes and processed into plasma. The plasma was then separated into two tubes for comparison, one unstimulated and the other stimulated by adding 250 μl of 100 μg / ml heat-aggregated gamma globulin (HAGG). Those skilled in the art will appreciate that HAGG is a potent stimulator of the classical complement pathway. Baseline measurements of sC5b-9, IL-6, and iC3b were performed on unstimulated samples using the LFA rapid test, which contains test lines capable of detecting each target, manufactured according to the present disclosure.
[0391] Both unstimulated and stimulated samples were then incubated for 1 hour at 37°C. After incubation, 90 μl of Fusan was added to the unstimulated sample to prevent further complement activation, and the concentrations of both sample sets were measured. Both tubes were then further incubated for an additional 2 hours at 37°C, and the presence and concentrations of sC5b-9, IL-6, and iC3b were measured. All samples were applied to the sample port of the multiplexed test cassette at the indicated time points (0, 60 minutes, and 180 minutes) and allowed a 30 minute incubation period for the assay to fully develop.
[0392] As shown in FIG. 17, measurements of the indicated time points of unstimulated samples (0, 60, and 180 min) and stimulated samples with HAGG (60 and 180 min) demonstrate the efficiency, accuracy, high sensitivity, and reliability for quantifying multiple targets from a single sample without the need for individual processing steps. As shown in FIG. 17, iC3b increased after 60 and 180 min in unstimulated samples, likely due to autoactivation. Similarly, HAGG stimulation of the classical complement pathway in plasma samples led to an increase in sC5b-9 concentrations, while IL-6 did not undergo significant changes. Utilizing the assay of the present disclosure has allowed a significant improvement in the ability of time course measurements to specifically detect changes in individual analytes in a rapid multiplexed assay.
[0393] Example 14: Diagnosis, monitoring, and / or treatment of Complement-Mediated Thrombotic Microangiopathy (CM-TMA), Atypical Hemolytic Uremic Syndrome (aHUS), and / or Thrombotic Thrombocytopenic Purpura (TTP) using undiluted samples As described herein, the technology of the present disclosure can be used to monitor and / or diagnose immune-mediated diseases, disorders and / or conditions. To diagnose and / or monitor CM-TMA, a cassette is manufactured with lines for detection and quantification of sC5b-9, ADAMTS13 activity, iC3b, C3, C4, C4d, Ba, and / or free C5 (in a sample that also contains an anti-C5 therapeutic). A sample is applied to the cassette and detected using the RapiPlex system.
[0394] If the level of ADAMTS13 activity is determined to be less than 10% (of a reference sample, e.g., ADAMTS13 substrate), the sample is more likely to be from a subject with thrombotic thrombocytopenic purpura (TTP) than from a subject with CM-TMA or aHUS. If the level of sC5b-9 is elevated, aHUS and / or TTP may be present. If the level of iC3b is elevated, C3 is reduced, and C4 is at control levels, the sample is more likely to be from a subject with atypical hemolytic uremic syndrome (aHUS). Depending on whether a diagnosis of aHUS, TTP, or another observation is made, the subject is treated with one or more therapies.
[0395] Example 15: Diagnosis and / or treatment of hematopoietic stem cell transplantation-associated thrombotic microangiopathy (HSCT-TMA) using undiluted samples As described herein, the technology of the present disclosure may be used to monitor and / or diagnose immune-mediated diseases, disorders and / or conditions. To diagnose and / or monitor HSCT-TMA, a cassette is manufactured with lines for detecting and quantifying sC5b-9, ADAMTS13, C3, C4, C4d, Ba, IL-8, and optionally IL-6, iC3b, and / or free C5. Without being bound to any particular theory, it is contemplated that in the diagnosis and / or treatment of HSCT-TMA, C4 / C4d is more important here (compared to the diagnosis and treatment of aHUS / TTP, for example) because HSCT-TMA is frequently associated with GVHD, which may be detected and / or monitored using C4 and C4d levels, among others. A sample from a patient who has undergone HSC transplantation is applied to the cassette and detected using the RapiPlex system, and read against known reference levels controlled by test lots from the cassette lot. Repeated testing is believed to be useful in this context to understand the development of trends and changes in complement proteins over time, as changes can occur rapidly and prompt intervention is critical to the treatment of patients.
[0396] If the levels of iC3b and / or C4d are elevated and C3 / C4 are decreased, the subject may be experiencing or at risk of experiencing GVHD and / or HSCT-TMA. Furthermore, if sC5b-9, Ba, and / or IL-8 are increased, the subject may be experiencing or at higher risk of experiencing HSCT-TMA. If the levels of sC5b-9 are within normal range, the subject is less likely to be experiencing or at risk of experiencing HSCT-TMA. It is important in any TMA to rule out TTP, as treatments are different and treatment delays can be fatal. Depending on any other abnormalities observed in the HSCT-TMA diagnosis and / or assay, the subject is retested and / or treated with one or more treatments.
[0397] Example 16: Diagnosis, monitoring, and / or treatment of lupus nephritis using undiluted samples As described herein, the technology of the present disclosure may be used to monitor and / or diagnose immune-mediated diseases, disorders and / or conditions. To diagnose and / or monitor lupus nephritis, a cassette is manufactured with lines for detection and quantification of iC3b, sC5b-9, intact C3 and / or IL-6, and creatinine if the sample is a urine sample, or iC3b, sC5b-9, C4, C4d, intact C3, and / or IL-6, and optionally free C5 (i.e., if the patient is on anti-C5 treatment) if the sample is a blood and / or plasma sample. As will be appreciated by those skilled in the art, since lupus nephritis is a very heterogeneous disease, a panel with several markers is expected to generate more accurate and clinically meaningful results compared to panels for other diseases where fewer markers may still provide a more reliable and actionable clinical picture. A sample from a patient having or suspected of having or developing lupus nephritis is applied to the cassette and detected using a reader system (such as, for example, a RapiPlex system).
[0398] If the plasma C4 and / or intact C3 levels in a subject already diagnosed with lupus are decreased, the subject may be at risk of having a flare, and if the subject has not been diagnosed with lupus, the subject may be experiencing or at risk of experiencing a lupus nephritis onset and / or flare. If the plasma C4d, iC3b and / or sC5b-9 levels are increased, the subject is likely experiencing or at risk of experiencing a lupus nephritis onset and / or flare. If the subject is diagnosed with lupus, an increase in plasma C4d can distinguish patients with lupus nephritis from those without renal damage. If the urinary IL-6, iC3b and / or sC5b-9 levels are increased in a subject already diagnosed with lupus nephritis, the patient may be experiencing a flare. If the levels of urinary IL-6, iC3b and / or sC5b-9 are elevated in a subject diagnosed with lupus without renal damage who has not yet been diagnosed with lupus nephritis, the subject may have or be at risk of developing lupus nephritis. Depending on whether a diagnosis of lupus nephritis or a risk of lupus flare is detected and / or other abnormalities are observed in the assay, the subject is treated with one or more therapies. In some cases, treatment may only include monitoring or further testing, with or without administration of any therapeutic agent, until or unless additional signs of flare or risk of flare are detected, as compared to the first measurement of one or more targets, as described in this example.
[0399] Example 17: Diagnosis, prevention and / or treatment of COVID19-associated cytokine release syndrome using undiluted samples As explained and described herein, the present disclosure provides new and improved detection, quantification, and multiplexing techniques. Without being bound to any particular theory, COVID19 is a disease known to have a vast array of clinical symptoms and outcomes, and inflammatory or other biological processes have thus far not been detectable in any preventative or meaningful therapeutic manner.
[0400] Here, biological samples (e.g., blood, plasma, saliva, urine) from patients with or suspected of having or having had COVID19 are tested for IL-6, IL-1, C5a, iC3b, CXCL9, sC5b-9, sCD25, ferritin, and / or MASP2:AT complex on at least one undiluted sample. Depending on which targets are present and at what levels, therapeutic and / or preventative interventions can be applied to the patient, such that current morbidity or mortality can be reduced by enabling health care providers to intervene in a manner or at a time that alters the clinical manifestations and / or progression of the disease and associated sequelae.
[0401] Example 18: Diagnosis, prevention and / or treatment of cytokine release syndrome using undiluted samples As explained and described herein, the present disclosure provides new and improved detection,...
Claims
1. 1. A method for measuring a target, comprising: (i) contacting an immunoassay device with at least a portion of the obtained sample; (ii) measuring one or more targets in the sample.
2. The method of claim 1 , wherein the immunoassay device comprises at least one test strip.
3. 10. The method of claim 1, wherein the immunoassay device contacts the portion of the sample within 30 minutes of the sample being obtained.
4. The method of claim 3 , wherein the sample is not subjected to off-line dilution prior to contacting the immunoassay device.
5. The method of claim 1 , wherein the sample is subjected to a pretreatment step including at least one dilution prior to contacting the immunoassay device.
6. The method of claim 1 , wherein the sample is or comprises a fluid.
7. The method of claim 1 , wherein the sample is not solid or is not substantially composed of solid material.
8. 2. The method of claim 1, wherein the sample is or comprises whole blood, plasma, serum, aqueous humor, tears, ocular fluid, urine and / or cerebrospinal fluid.
9. The method of claim 1 , wherein the sample is a crude sample.
10. The method of claim 9 , wherein the crude sample is not diluted prior to contacting the immunoassay device.
11. The method of claim 1 , wherein the sample has undergone one or more purification steps prior to contacting the immunoassay device.
12. The method of claim 1 , comprising an immunoassay device including at least one of a sample pad and a conjugate pad.
13. The method of claim 1 , wherein the immunoassay device includes at least two, three, four, five, or six test strips.
14. 14. The method of claim 13, wherein the at least two, three, or four test strips each include at least two, three, four, or five test lines.
15. 10. The method of claim 1, wherein said measuring is performed approximately 30 to 300 minutes after said sample is obtained.
16. 10. The method of claim 1, wherein said measuring is performed within 30 minutes of said sample being obtained.
17. A method for measuring at least one target in a sample, the improvement comprising measuring said target in the sample by contacting an immunoassay device with the sample, wherein the sample has not been subjected to offline dilution prior to said contacting, and measuring one or more targets, wherein said measurement is more efficient, accurate, sensitive, specific, reliable, and / or rapid compared to measurements performed on diluted samples.
18. 20. The method of claim 17, wherein at least one measurement is more efficient, sensitive, accurate, specific, reliable, and / or rapid than a method that includes one or more offline sample dilution steps prior to said contacting with said immunoassay device.
19. 20. The method of claim 17, wherein the sample is or comprises a fluid.
20. 20. The method of claim 17, wherein the sample is not solid or does not consist substantially of solid material.
21. 18. The method of claim 17, wherein the sample is or comprises whole blood, plasma, serum, aqueous humor, urine, tears, ocular fluid, and / or cerebrospinal fluid.
22. The method of claim 17, wherein the sample is a crude sample.
23. 20. The method of claim 17, wherein the sample has undergone one or more purification steps prior to said contacting with the immunoassay device.
24. 18. The method of claim 17, wherein the measuring is performed using an immunoassay device comprising at least two, three, or four, five, or six test strips, each test strip comprising at least two tests, three, four, or five test lines, and optionally at least one test line is a control line.
25. 18. The method of claim 17, wherein said measuring is performed approximately 30 to 300 minutes after said sample is obtained.
26. 20. The method of claim 17, wherein said measuring is performed within 30 minutes of said sample being obtained.
27. A method for obtaining measurements of one or more targets in a sample as an indication for modifying or administering one or more treatments to a subject from whom the sample was obtained, comprising: (a) measuring a target in the sample obtained from the subject, (i) contacting an immunoassay device with at least a portion of the sample; (ii) allowing the sample and the immunoassay device to stand together for a period of time; (iii) measuring at least one target in the sample; (b) comparing one or more target measurements with at least one reference measurement, said comparison indicating that one or more treatments for the subject from whom the sample was taken should be altered or administered.
28. 28. The method of claim 27, wherein the immunoassay device comprises at least one conjugate pad.
29. 30. The method of claim 28, wherein the at least one conjugate pad comprises beads.
30. 30. The method of claim 29, wherein the beads comprise nanobeads.
31. The method of claim 30, wherein the nanobeads are between 100 and 500 nm.
32. The method of claim 30, wherein the nanobeads are between 200 and 400 nm.
33. 30. The method of claim 28, wherein the nano-beads comprise at least one detection agent.
34. 34. The method of claim 33, wherein the at least one detection agent is a labeled antibody.
35. The method of claim 27 , wherein the immunoassay device comprises at least one capture agent.
36. 36. The method of claim 35, wherein the at least one capture agent is or comprises an antibody.
37. 30. The method of claim 27, wherein the immunoassay device further comprises at least one of a conjugate pad and a sample pad.
38. 38. The method of claim 37, wherein the conjugate pad comprises at least one competing agent.
39. 36. The method of claim 35, wherein the at least one competitor binds to at least one target in the sample.
40. 36. The method of claim 35, wherein the at least one competitor binds to an excess of at least one target in the sample.
41. 30. The method of claim 27, wherein said measuring is performed using a reader system capable of measuring multiple test lines in multiple visible channels.
42. A method for obtaining an amount of a target in a sample as an indication for modifying or administering one or more treatments to a subject from which the sample was obtained, comprising: (a) determining the amount of the target in the sample obtained from the subject; (i) allowing a container having the sample to stand for a first period of time, wherein the sample is diluted within the container; (ii) contacting an immunoassay device with the diluted sample; (iii) allowing the immunoassay device containing the diluted sample to stand for a second period of time; (iv) measuring at least one target in the sample, wherein the amount of the target indicates that one or more treatments to the subject from which the sample was taken should be altered or administered.
43. 43. The method of claim 42, wherein the sample is diluted with a substrate to which at least one target in the sample can react.
44. 43. The method of claim 42, wherein the first period of time is 5 minutes or less.
45. 43. The method of claim 42, wherein the second period of time is 5 minutes or less.
46. A kit comprising: (i) a test cassette including an immunoassay device, the immunoassay device including at least one test strip including at least one test line; (ii) at least one detection agent, and optionally, (iii) at least one competitor.
47. 1. A test cassette comprising: (i) an immunoassay device, the immunoassay device itself including at least one test strip; (ii) at least two test lines.
48. 1. A method of comparing one or more target measurements to a range of measurements as an indication of whether a subject has or is susceptible to at least one disease, disorder, or condition, comprising: (i) measuring one or more targets in a sample obtained from the subject; (ii) comparing the measurement values of one or more targets to a range of measurements of one or more reference samples; The method, wherein the measurement values of the one or more targets falling outside the measurement range of the one or more reference samples indicates that the patient has or is at risk for developing a disease, disorder, or condition.
49. 1. A reader system comprising: (a) a means for measuring one or more targets in a sample, comprising: (i) inserting a test cassette into the reader system such that the direction of sample flow on the immunoassay device of the test cassette is oriented parallel to gravity; (ii) measuring at least one target on at least one test line on at least one test strip in the immunoassay device.
50. 50. The reader system of claim 49, wherein the test cassette is inserted through a port in the reader system.
51. 50. The reader system of claim 49, wherein the sample is added to the immunoassay device prior to inserting the test cassette into the reader system.
52. 50. The reader system of claim 49, wherein the sample is added to the immunoassay device after inserting the test cassette into the reader system.
53. 50. The reader system of claim 49, wherein said measuring comprises measuring at least four test lines on at least one test strip of said immunoassay device.
54. 49. The method of any one of claims 1-45 or 48, wherein the target is one or more of C3, C3a, iC3b, C4, C5, sC5b-9, IL-6, ADAMTS13, MASP2:AT complex, C4d, Ba, Bb, FH, CXCL9, sCD25, microRNA, IL8, pentraxin 3, IL1, VCAM1, thrombomodulin, ferritin, CRP, IL-10, TNFα, IFNγ, and / or creatinine.
55. 47. The kit of claim 46, wherein the at least one test line comprises at least one capture agent for one or more of C3, C3a, iC3b, C4, C5, sC5b-9, IL-6, ADAMTS13, MASP2:AT complex, C4d, Ba, Bb, FH, CXCL9, sCD25, microRNA, IL8, pentraxin 3, IL1, VCAM1, thrombomodulin, ferritin, CRP, IL-10, TNFα, IFNγ, and / or creatinine.
56. 48. The test cassette of claim 47, wherein at least one test line comprises at least one capture agent for one or more of C3, C3a, iC3b, C4, C5, sC5b-9, IL-6, ADAMTS13, MASP2:AT complex, C4d, Ba, Bb, FH, CXCL9, sCD25, microRNA, IL8, pentraxin 3, IL1, VCAM1, thrombomodulin, ferritin, CRP, IL-10, TNFα, IFNγ, and / or creatinine.
57. 54. The reader system of any one of claims 49 to 53, wherein the one or more targets comprise one or more of C3, C3a, iC3b, C4, C5, sC5b-9, IL-6, ADAMTS13, MASP2:AT complex, C4d, Ba, Bb, FH, CXCL9, sCD25, microRNA, IL8, pentraxin 3, IL1, VCAM1, thrombomodulin, ferritin, CRP, IL-10, TNFα, IFNγ, and / or creatinine.
58. 50. The method of any one of claims 27, 42, or 48, wherein the subject is suspected of having or is at risk of having one or more of age-related macular degeneration (AMD), complement 3 glomerulopathy (C3G), hematopoietic stem cell transplant-associated thrombotic microangiopathy (HSCT-TMA), complement-mediated thrombotic microangiopathy (CM-TMA), atypical hemolytic uraemic syndrome (aHUS), thrombotic thrombocytopenic purpura (TTP), COVID-19, lupus erythematosus, lupus nephritis, cytokine release syndrome, Alzheimer's disease (AD), or a combination thereof.
59. 50. The method of any one of claims 27, 42, or 48, wherein the subject is at risk of developing or has been diagnosed as having one or more of: AMD, complement 3 glomerulopathy (C3G), hematopoietic stem cell transplant-associated thrombotic microangiopathy (HSCT-TMA), complement-mediated thrombotic microangiopathy (CM-TMA), atypical hemolytic uraemic syndrome (aHUS), thrombotic thrombocytopenic purpura (TTP), COVID 19, lupus erythematosus, lupus nephritis, cytokine release syndrome, Alzheimer's disease (AD), or a combination thereof.