Antigenic respiratory syncytial virus polypeptides

Abstract

To provide antigenic respiratory syncytial virus (RSV) polypeptides for use in eliciting antibodies against RSV, and also provide antigenic polypeptides comprising an RSV polypeptide and a ferritin protein.SOLUTION: The present invention provides an antigenic RSV polypeptide comprising an RSV F polypeptide, wherein an epitope of the RSV polypeptide that is shared between pre-fusion RSV F and post-fusion RSV F is blocked.SELECTED DRAWING: Figure 1B

Description

[Technical field]

[0001] This application claims the benefit of U.S. Provisional Patent Application No. 62 / 652,199, filed April 3, 2018, which is incorporated by reference herein in its entirety.

[0002] This application contains a Sequence Listing, which has been submitted electronically in ASCII format and is incorporated herein by reference in its entirety. The ASCII copy was created on March 27, 2019, is named 2019-03-27_01121-0031-00PCT_SL_ST25.txt, and is 187,354 bytes in size. [Background technology]

[0003] Despite many successes in the field of vaccinology, novel breakthroughs are needed to protect humans against many life-threatening infectious diseases. Many currently licensed vaccines rely on decades-old technologies to produce live attenuated or inactivated killed vaccines, which have inherent safety concerns and often stimulate only short-lived and weak immune responses, requiring the administration of multiple doses. Advances in genetic and biochemical engineering have made it possible to develop therapeutics against challenging disease targets, but their application in the field of vaccinology has yet to be fully realized. Recombinant protein technologies are now enabling the design of optimal antigens. Furthermore, nanoparticles are increasingly demonstrating the potential for optimal antigen presentation and targeted drug delivery. Nanoparticles with multiple antigens attached have shown increased binding avidity afforded by the multivalent display of their molecular cargo and the ability to cross biological barriers more efficiently due to their nanoscale size. Helicobacter pylori (H. pylori) ferritin nanoparticles fused to influenza virus hemagglutinin (HA) protein were used to treat mouse influenza (See Non-Patent Document 1.) This fusion protein self-assembles into octahedral symmetric nanoparticles displaying eight trimeric HA spike structures and confers potent immune responses in various preclinical models when used with adjuvants.

[0004] Respiratory syncytial virus (RSV) is the leading cause of severe respiratory disease in infants and the leading cause of respiratory illness in the elderly. Despite decades of research, the need for a vaccine remains unmet. Although the need for a vaccine is clear, development of an RSV vaccine was hindered in the 1960s when clinical trials using formalin-inactivated RSV virus made disease more severe in infants after RSV infection. See Non-Patent Document 2. More recently, clinical programs using RSV F antigen in a post-fusion conformation have failed to elicit sufficient efficacy in adults. See Non-Patent Document 3. However, RSV F antigen stabilized in a pre-fusion conformation may induce a better neutralizing response than the post-fusion antigen, which failed in the clinic.

[0005] Herein, a series of novel polypeptides, nanoparticles, compositions, methods and uses comprising RSV polypeptides are presented. A novel RSV F polypeptide was generated, including a polypeptide in which the epitope of the RSV polypeptide shared between pre-fusion RSV F and post-fusion RSV F is blocked by, for example, N-glycans at the glycosylation site added by mutation. Antigenic polypeptides and nanoparticles comprising these novel RSV polypeptides and ferritin were also generated. Antigenic ferritin polypeptides comprising RSV G polypeptides were also generated. In addition, self-adjuvanting antigenic polypeptides comprising RSV polypeptides and ferritin were developed, and can be used as adjuvants, etc. The immunostimulatory moiety is directly chemically bound to the antigenic polypeptide.Direct binding of the immunostimulatory moiety to the antigenic polypeptide allows targeted co-delivery of the immunostimulatory moiety and the RSV polypeptide in a single macromolecular entity, which can greatly reduce the possibility of systemic toxicity that is a concern with conventional vaccines that contain antigens and immunostimulatory molecules such as adjuvants as separate molecules.The co-delivery of the immunostimulatory moiety together with the RSV polypeptide in a macromolecular entity and their multivalent presentation can also reduce the total dose required to induce protection, and reduce manufacturing burden and cost. [Prior art documents] [Non-patent literature]

[0006] [Non-Patent Document 1] Kanekiyo et al., Nature 499:102-106 (2013) [Non-Patent Document 2] Hurwitz (2011) Expert Rev Vaccines 10(10):1415~1433 [Non-Patent Document 3] Faloon et al. (2017) JID 216:1362-1370 Summary of the Invention [Problem to be solved by the invention]

[0007] It is an object of the present disclosure to provide compositions, kits, methods, and uses that can provide one or more of the above advantages, or at least provide the public with a useful choice. Accordingly, the following embodiments are disclosed herein: [Means for solving the problem]

[0008] Embodiment 1 is an antigenic RSV polypeptide comprising a RSV F polypeptide, wherein an epitope of the RSV polypeptide shared between pre-fusion RSV F and post-fusion RSV F is blocked.

[0009] In embodiment 2, the RSV F polypeptide comprises an antigenic RSV polypeptide, wherein the RSV F polypeptide comprises amino acid residues 62-69 and 196-209 of SEQ ID NO:26, as well as an asparagine corresponding to positions 328, 348, or 507 of SEQ ID NO:26.

[0010] Embodiment 3 is an antigenic RSV polypeptide as described in embodiment 2, in which an epitope of the RSV polypeptide shared between pre-fusion RSV F and post-fusion RSV F is blocked.

[0011] Embodiment 3b is an antigenic RSV polypeptide of embodiment 1 or 3, wherein the blocked epitope is an antigenic site 1 epitope of RSV F.

[0012] Embodiment 3c is an antigenic RSV polypeptide of embodiments 1 or 3-3b, in which two or more epitopes shared between pre-fusion RSV F and post-fusion RSV F are blocked.

[0013] Embodiment 3d is an antigenic RSV polypeptide of any one of embodiments 1 or 3-3c, wherein two or more epitopes of antigenic site 1 of RSV F are blocked.

[0014] Embodiment 3e is an antigenic RSV polypeptide according to embodiments 1 or 3-3d, wherein one or more or all epitopes that topologically overlap with the blocked epitope are also blocked.

[0015] Embodiment 3f is an antigenic RSV polypeptide of embodiment 3e, wherein the blocked epitope is an antigenic site 1 epitope of RSV F.

[0016] Embodiment 4 is an antigenic RSV polypeptide of any one of embodiments 1 to 3f, comprising a pre-fusion RSV F.

[0017] Embodiment 5 is an antigenic RSV polypeptide of any one of embodiments 1 to 4, which is recognized by a pre-fusion RSV F-specific antibody selected from D25 or AM14.

[0018] Embodiment 6 is an antigenic RSV polypeptide according to embodiment 4 or 5, wherein the pre-fusion RSV F comprises an epitope not found in the post-fusion RSV F.

[0019] Embodiment 7 is an antigenic RSV polypeptide of any one of embodiments 1-3, comprising a post-fusion RSV F.

[0020] Embodiment 8 is an antigenic RSV polypeptide according to any one of embodiments 1 or 3-6, wherein the epitope is blocked with an asparagine-linked N-glycan.

[0021] Embodiment 9 is an antigenic RSV polypeptide of embodiment 7, wherein the asparagine corresponds to a non-asparagine residue in the wild-type RSV F sequence (SEQ ID NO:26), and the non-asparagine residue corresponds to positions 328, 348, or 507 of SEQ ID NO:26.

[0022] Embodiment 10 is an antigenic RSV polypeptide according to any one of embodiments 1 to 9, further comprising a ferritin protein.

[0023] Embodiment 11 is an antigenic RSV polypeptide of embodiment 11, wherein the ferritin comprises a mutation that replaces a surface-exposed amino acid with a cysteine.

[0024] Embodiment 12 is an antigenic RSV polypeptide comprising a RSV F polypeptide and a ferritin protein, wherein the ferritin protein comprises a mutation that replaces a surface-exposed amino acid with a cysteine.

[0025] Embodiment 13 is an antigenic RSV polypeptide according to any one of embodiments 11 to 12, wherein the ferritin comprises one or more of the E12C, S26C, S72C, A75C, K79C, S100C, and S111C mutations of H. pylori ferritin, or one or more corresponding mutations in non-H. pylori ferritin as determined by pairwise or structural alignment.

[0026] Embodiment 14 is an antigenic RSV polypeptide according to any one of embodiments 10 to 13, comprising one or more immunostimulatory moieties linked to ferritin via a surface-exposed amino acid, optionally wherein the surface-exposed amino acid is a cysteine ​​resulting from a mutation.

[0027] Embodiment 15 is an antigenic RSV polypeptide according to any one of embodiments 10 to 14, wherein the ferritin comprises a mutation that replaces a surface-exposed asparagine with a non-asparagine amino acid, and optionally the asparagine is at position 19 of H. pylori ferritin or at a similar position of a non-H. pylori ferritin as determined by pairwise or structural alignment. It is a peptide.

[0028] Embodiment 16 is an antigenic RSV polypeptide according to any one of embodiments 10 to 15, wherein the ferritin comprises a mutation that replaces an internal cysteine ​​with a non-cysteine ​​amino acid, and optionally the internal cysteine ​​is at position 31 of H. pylori ferritin or at a position corresponding to position 31 of H. pylori ferritin as determined by pairwise or structural alignment.

[0029] Embodiment 17 is an antigenic RSV polypeptide according to any one of embodiments 12-16, wherein the RSV F polypeptide comprises an epitope not found on post-fusion RSV F that is a site 0 epitope, and optionally the site 0 epitope comprises amino acid residues 62-69 and 196-209 of SEQ ID NO: 26.

[0030] Embodiment 18 is an antigenic RSV polypeptide of any one of embodiments 1-17, wherein the RSV F polypeptide includes an asparagine at a position corresponding to position 328 of SEQ ID NO:26.

[0031] Embodiment 19 is an antigenic RSV polypeptide of any one of embodiments 1-18, wherein the RSV F polypeptide includes an asparagine at a position corresponding to position 348 of SEQ ID NO:26.

[0032] Embodiment 20 is an antigenic RSV polypeptide of any one of embodiments 1-19, wherein the RSV F polypeptide includes an asparagine at a position corresponding to position 507 of SEQ ID NO:26.

[0033] Embodiment 21 is an antigenic RSV polypeptide of any one of embodiments 1 to 20, wherein the RSV F polypeptide includes a leucine at a position corresponding to position 498 of SEQ ID NO:26.

[0034] Embodiment 22 is an antigenic RSV polypeptide of any one of embodiments 1-21, wherein the RSV F polypeptide includes a proline at a position corresponding to isoleucine 217 of SEQ ID NO:26.

[0035] Embodiment 23 is an antigenic RSV polypeptide according to any one of embodiments 1 to 22, wherein the RSV F polypeptide comprises an amino acid other than cysteine ​​at a position corresponding to position 155 of SEQ ID NO:26 and / or an amino acid other than cysteine ​​at a position corresponding to position 290 of SEQ ID NO:26.

[0036] Embodiment 24 is an antigenic RSV polypeptide according to any one of embodiments 1 to 23, comprising a serine at a position corresponding to position 155 of SEQ ID NO:26 and / or a serine at a position corresponding to position 290 of SEQ ID NO:26.

[0037] Embodiment 25 is an antigenic RSV polypeptide of any one of embodiments 1 to 24, wherein the RSV F polypeptide lacks a furin cleavage site and, optionally, a linker is present in place of the furin cleavage site.

[0038] Embodiment 26 is an antigenic RSV polypeptide according to any one of embodiments 1 to 25, wherein the RSV F polypeptide comprises a sequence having at least 85%, 90%, 95%, 97%, 98%, 99%, or 99.5% identity to amino acids 1 to 478 of SEQ ID NO: 17.

[0039] Embodiment 27 is an antigenic RSV polypeptide according to any one of embodiments 1 to 26, wherein the RSV F polypeptide comprises a sequence having at least 85%, 90%, 95%, 97%, 98%, 99%, or 99.5% identity to the sequence of SEQ ID NO: 17.

[0040] Embodiment 28 is an antigenic RSV polypeptide of embodiment 20 or 21, comprising amino acids 1 to 478 of SEQ ID NO:17.

[0041] Embodiment 29 is an antigenic RSV polypeptide according to any one of embodiments 1 to 19, comprising a sequence having at least 85%, 90%, 95%, 97%, 98%, 99%, or 99.5% identity to amino acids 1 to 478 of SEQ ID NO: 23.

[0042] Embodiment 30 is an antigenic RSV polypeptide of any one of embodiments 1 to 19 or 23, wherein the RSV F polypeptide comprises a sequence having at least 85%, 90%, 95%, 97%, 98%, 99%, or 99.5% identity to the sequence of SEQ ID NO: 23.

[0043] Embodiment 31 is an antigenic RSV polypeptide of embodiment 23 or 24, comprising amino acids 1 to 478 of SEQ ID NO:23.

[0044] Embodiment 32 is an antigenic RSV polypeptide according to any one of embodiments 1 to 31, comprising any one of SEQ ID NOs: 3 to 23.

[0045] Embodiment 32a is an antigenic RSV polypeptide of embodiment 32 comprising the sequence of SEQ ID NO:17.

[0046] Embodiment 32b is an antigenic RSV polypeptide of embodiment 32 comprising the sequence of SEQ ID NO:23.

[0047] Embodiment 33 is a ferritin particle comprising an antigenic RSV polypeptide according to any one of embodiments 10 to 32b.

[0048] Embodiment 34 is a composition comprising an antigenic RSV polypeptide or ferritin particle according to any one of embodiments 1 to 33, and a RSV G polypeptide.

[0049] Embodiment 34b is the composition of embodiment 34, wherein the composition comprises ferritin particles, the ferritin particles comprise a RSV G polypeptide, and optionally, the RSV G polypeptide is chemically conjugated to the ferritin particles.

[0050] Embodiment 34c is the composition of embodiment 34 or 34b, wherein the RSV G polypeptide is not glycosylated.

[0051] Embodiment 35 is a composition comprising an antigenic RSV polypeptide or ferritin particle according to any one of embodiments 1 to 33, or a composition according to any one of embodiments 34 to 34c, further comprising a pharma- ceutically acceptable carrier.

[0052] Embodiment 36 is an antigenic RSV polypeptide, ferritin particle, or composition according to any one of embodiments 1 to 35 for use in a method for inducing an immune response to RSV or in protecting a subject against RSV infection.

[0053] Embodiment 37 is a method for inducing an immune response to RSV or protecting a subject against RSV infection, comprising administering to a subject one or more antigenic RSV polypeptides, ferritin particles, or compositions described in any one of embodiments 1 to 36.

[0054] Embodiment 38 is an antigenic RSV polypeptide, ferritin particle, composition, or method according to any one of embodiments 36 to 37, wherein the subject is a human.

[0055] Embodiment 39 is a nucleic acid encoding an antigenic RSV polypeptide of any one of embodiments 1 to 32b, optionally where the nucleic acid is an mRNA.

[0056] Embodiment 39b is a composition or kit comprising a nucleic acid of embodiment 39 and a nucleic acid encoding a RSV G polypeptide, optionally wherein one or both nucleic acids are mRNA.

[0057] Additional objects and advantages will be set forth in part in the description which follows, and in part will be obvious from the description, or may be learned by practice. The objects and advantages will be realized and attained by means of the elements and combinations particularly pointed out in the appended claims.

[0058] The foregoing general description and the following detailed description are exemplary and explanatory only and are not restrictive of the scope of the claims.

[0059] The following drawings, which are incorporated in and constitute a part of this specification, illustrate several embodiments and, together with the description, serve to explain the principles described herein. [Brief description of the drawings]

[0060] [Figure 1A]1A-1D are diagrams showing exemplary RSV Pre-F-NP polypeptide structures. (FIG. 1A) Linear diagram listing the residue numbers corresponding to the N-terminus of each segment. Numbering is according to SEQ ID NO: 26. Domains 1-3 are designated DI, DII and DIII, respectively, and the heptad repeat region A (HRA) and heptad repeat region B (HRB) are also labeled. The C-terminal ferritin is labeled (ferritin nanoparticles). The F1 and F2 fragments of the RSV F portion are shown below the drawing. The region between the F1 and F2 fragments, in which the peptide 27 fragment (p27) fusion peptide (FP) and the furin cleavage site (furin site) were deleted and replaced with a flexible linker to form the single-chain F construct, is shown as a line and is shown above the drawing. The asterisks above the diagram indicate the approximate locations of the engineered glycosylation sites E328N, S348N and R507N. [Figure 1B] 1B is a diagram showing an exemplary RSV Pre-F-NP polypeptide structure. (FIG. 1B) Structural model of the pre-fusion RSV F portion showing key neutralizing (Nab) epitopes for D25, AM14, 101F, and palivizumab antibodies. The approximate regions of the shared pre-fusion and post-fusion structural epitopes are indicated by white triangles. The positions of exemplary engineered glycosylation sites E328N, S348N, and R507N are labeled. The engineered glycosylation sites are structurally shared between the pre-fusion and post-fusion conformations and are mapped to regions distant from the key neutralizing epitopes recognized by antibodies such as D25, AM14, 101F, and palivizumab. Thus, constructs containing these engineered glycan sites still bind to the above-mentioned neutralizing antibodies (data not shown). [Figure 1C] 1C is a diagram showing an exemplary RSV Pre-F-NP polypeptide structure. (FIG. 1C) A structural model of the RSV pre-fusion F protein nanoparticle (Pre-F-NP) with the HRA and HRB regions is the darker shaded one. The resulting folded Pre-F-NP construct can form a 24-mer that displays the key epitopes listed in FIG. 1B. [Figure 1D]1D shows an exemplary RSV Pre-F-NP polypeptide structure. (FIG. 1D) 2D class average of electron micrographs of RSV Pre-F-NP construct RF8085 (SEQ ID NO: 1) shows the symmetry of the RSV F trimer moiety on the 24-mer ferritin nanoparticle. [Diagram 2] 1 shows the small scale expression of several Pre-F-NP constructs expressed in 293 cell conditioned medium as measured by D25 antibody Western blot. RF8090 is SEQ ID NO: 2, which is a cloning variant used in CHO expression with the same sequence as RF8085, i.e., SEQ ID NO: 1. RF8085 and RF8090 are Pre-F-NP constructs with disulfide and cavity-filling mutations of DS-CAV with deletions and single-chain linkers as described in FIG. 1A, fused N-terminally to ferritin. RF8100-RF8105 and RF8108-RF8112 have the sequences of SEQ ID NOs: 3-8 and 11-14, respectively. scF-pFerr = fusion protein of RSV F polypeptide and ferritin. Mutations that appear to improve expression of the constructs relative to the RF8090 benchmark are shown below the Western blot. Notable mutations include the addition of glycan sites via the E328N, S348N and R507N mutations, as well as the central helix capping mutation I327P, which increased the expression and secretion of RSV F nanoparticles into conditioned medium as measured by Western blot. [Diagram 3] Figure 1 shows the expression of RF8085 (SEQ ID NO: 1, control construct) and RF8106 (SEQ ID NO: 9, containing the I217P mutation in RF8108 and lacking the disulfide (DS) mutation of DS-CAV1) as measured by Western blot analysis of conditioned medium from 293 expression. Replacing DS with the central helix capping mutation I217P significantly increased expression. Replacing DS with the central helix capping mutation does not affect binding of the constructs to the prefusion-specific antibodies D25 and AM14. [Figure 4]1 shows the results of size-exclusion chromatography purification of the RF8106 construct (SEQ ID NO: 9). The retention volume of RF8106 nanoparticles on a Superose 6 preparative SEC column of approximately 65 ml was consistent with folded 24-mer nanoparticles, suggesting that the mutations in RF8106 did not prevent nanoparticle formation. [Diagram 5] Figures 5A-5B show dynamic light scattering (DLS) analysis of non-reduced (5A) and reduced (5B) RF8106. Similar to the SEC analysis, DLS demonstrated that RSV Pre-F-NP formed the expected folded nanoparticles. Furthermore, the reduction data showed that the particles were not destroyed by reduction, which was performed prior to adjuvant conjugation to the surface-exposed cysteines introduced on ferritin by mutation (see Figure 6). [Figure 6] Coomassie stained SDS-PAGE gel analysis of RF8106 with or without conjugation to the TLR9 agonist CpG. The increased gel shift of the CpG-treated nanoparticles demonstrated that CpG adjuvant could be added to RSV F nanoparticles to approximately 40-50% completion. Conjugation of CpG or other immunostimulatory moieties such as the TLR7 / 8 agonist SM7 / 8 did not inhibit the ability of the particles to bind to the prefusion-specific antibodies D25 and AM14. [Figure 7]1 shows a Western blot of nanoparticles containing RSV F with (RF8117, SEQ ID NO: 17) and without additional glycans (RF8085, SEQ ID NO: 1, and RF8113, SEQ ID NO: 16). RF8113 is similar to RF8106, but replaces the S111C surface-exposed cysteine ​​from RF8106 (using ferritin residue numbering, i.e., corresponding to the position in the ferritin sequence of SEQ ID NO: 208) with a K79C surface-exposed cysteine ​​(also using ferritin residue numbering) to move the conjugation site further away from the Pre-F moiety. Like RF8106, RF8113 retains improved expression relative to the benchmark molecule RF8085. RF8117 is similar to RF8113 but additionally contains the three glycosylation mutations identified in Figure 2, i.e., E328N, S348N and R507N, to further improve expression and block a non-neutralizing epitope shared between the pre-fusion F and post-fusion F conformations as described in Figure 1B. [Figure 8] Figure 1 shows the expression of RSV F constructs with different substitutions in potential trypsin-like protease cleavage sites. In CHO cell line expression of RF8090 (same protein sequence as RF8085 with a different DNA sequence adapted for the CHO expression vector), it was observed that the polypeptide was truncated between the F and ferritin moieties, resulting in reduced expression. Due to the resulting mass of the F moiety, it was estimated that proteolysis may occur near the HRB, Bull-Frog linker region of the Pre-F-NP construct. Mutations of lysine and arginine residues (residues approximately 450-550) within this region were explored to eliminate potential trypsin-like proteolysis of the construct. Mutations of RF8122 (SEQ ID NO: 18) to RF8117 (K498L and K508Q) may result in improved expression in 293 cells and reduce or eliminate proteolysis in CHO cells. Selective mutations limited expression. [Figure 9-1]Figure 9A-B shows the expression of RF8090, RF8117 and RF8140 in stably transfected CHO cells. The expression yield of RF8090 (SEQ ID NO: 2) was observed at a low level. Mutations replacing the disulfide of DS-CAV1 and mutations in the linker between the F and ferritin moieties to remove potential typsin cleavage sites were introduced as described above to construct RF8117 (SEQ ID NO: 17) and RF8140 (SEQ ID NO: 23), which were cloned into stable expressing CHO cells. (Figure 9A) The expression of RF8117 and RF8140 from three and four pools of CHO cells in CHO conditioned medium was compared with the yield of RF8090 in CHO conditioned medium by D25-Western blot analysis. All three CHO pools of RF8117 and all four CHO pools of RF8140 express at a higher yield than RF8090. (FIG. 9B) Expression of RF8117 into CHO conditioned medium as measured by D25 pre-fusion F specific antibody by Octet. The left panel shows the response of RF8140 purified from known concentrations of 293 medium plotted against the response of binding to D25 on a Protein A chip providing a standard curve. Individual dots represent the response to D25 binding from RF8117 CHO conditioned medium. The right panel shows the calculated yield of RF8117 or RF8140 in CHO pool conditioned medium based on the D25 binding response. Both RF8117 and RF8140 were expressed in the medium as measured by binding of D25 and AM14, demonstrating that, like 293 cells, CHO cells can express Pre-F-NP in a folded manner that retains the pre-fusion F trimer structure. [Figure 9-2] Continued from Figure 9-1. [Figure 10]10A-B show neutralizing antibody responses to Pre-F-NP RF8117. (FIG. 10A) Comparison of RSV neutralization titers elicited by high dose (1 μg) and low dose (0.1 μg) immunization with DS-CAV1 (Pre-F trimer, SEQ ID NO: 25), post-fusion F trimer (Post-F trimer, SEQ ID NO: 24) or Pre-F-NP with engineered glycosylation (Pre-F-NP, RF8117, SEQ ID NO: 17) measured by VERO cell assay. All RSV polypeptides were administered with adjuvant AF03 as described herein. Throughout, unless otherwise stated, AF03 was administered with but not conjugated to RSV polypeptides or nanoparticles. RSV polypeptides and doses are displayed below the x-axis. Statistical analysis of high dose response compared to Pre-F-NP immunization is shown. (FIG. 10B) Comparison of RSV neutralization titers induced by high dose (1 μg) and low dose (0.1 μg) immunization with DS-CAV1 (Pre-F trimer), Pre-F-NP without engineered glycosylation (RF8113, SEQ ID NO: 16), or Pre-F-NP with engineered glycosylation (RF8117, SEQ ID NO: 17) was measured by VERO cell assay. All RSV polypeptides were administered with adjuvant AF03 (not conjugated to any polypeptide or nanoparticle) as described herein. RSV polypeptides and doses are displayed below the x-axis. [Figure 11-1]11A-D show a comparison of RSV pre-fusion F trimer (DS-CAV1) binding and RSV neutralizing antibodies induced by immunization with post-fusion F trimer (SEQ ID NO: 24) or Pre-F-NP (RF8140, SEQ ID NO: 23) in mouse or non-human primate models. (FIG. 11A) Compares pre-fusion F trimer binding antibody responses induced in mice from immunization with post-fusion F and Pre-F-NP (RF8140, SEQ ID NO: 23). (FIG. 11B) Shows neutralizing antibody responses induced in mice from immunization with post-fusion F and Pre-F-NP (RF8140, SEQ ID NO: 23). (FIG. 11C) Compares pre-fusion F trimer binding antibody responses (AF03, shown in brackets below) induced in non-human primates by Pre-F-NP with or without adjuvant. (FIG. 11D) Compares the RSV neutralization titers induced by immunization with Pre-F-NP (RF8140, SEQ ID NO: 23) with or without AF03 adjuvant. In mice, Pre-F-NP induces high pre-fusion F binding and RSV neutralization responses compared to post-fusion trimers. In non-human primates, Pre-F-NP induces strong neutralization responses. [Figure 11-2] Continued from Figure 11-1. [Figure 12]12A-12B show that engineered glycosylation sites block post-fusion epitopes. (FIG. 12A) Antibody responses to pre-fusion F (DS-CAV1) induced by immunization with Pre-F-NP (RF8113) without engineered glycosylation or Pre-F-NP (engineered Gly particles) with engineered glycosylation at high (1 μg) and low (0.1 μg) doses, as measured by Octet. (FIG. 12B) Antibody responses to post-fusion trimers induced by immunization with Pre-F-NP (RF8113) without engineered glycosylation or Pre-F-NP (RF8117) with engineered glycosylation at high (1 μg) and low (0.1 μg) doses, as measured by Octet. All RSV polypeptides were mixed with AF03 during immunization as described above. Both RF8113 and RF8117 elicit robust antibody responses against prefusion F, whereas the postfusion F antibody response elicited by RF8117 is significantly reduced, due to engineered glycans mapping to shared prefusion and postfusion epitopes ( Fig. 2B ). [Figure 13-1] Figures 13A-C show blocking of non-neutralizing epitopes by engineered glycosylation sites. (Figure 13A) Comparison of RSV neutralization titers induced by immunization with Pre-F NPs with wild-type glycosylation sites ("Wt glycan particles", RF8113, SEQ ID NO: 16) versus Pre-F NPs with additional engineered glycosylation sites ("+ glycan particles", RF8117, SEQ ID NO: 17) at a dose of 0.1 μg in a mouse study as measured by VERO cell assay. (Figure 13B) Comparison of RSV post-fusion F trimer binding antibody responses induced by immunization with Wt glycan particles (RF8113, SEQ ID NO: 16) versus + glycan particles (RF8117, SEQ ID NO: 17) at a dose of 0.1 μg in a mouse study. (Figure 13C) The ratio of measured neutralizing titers to binding titers from panels A and B demonstrates that the engineered glycans did not reduce functional neutralizing antibody responses but did reduce non-neutralizing antibodies elicited to shared pre- and post-fusion epitopes (Figure 1B), thereby improving the neutralizing / binding antibody ratio. [Figure 13-2] Continued from Figure 13-1. [Figure 14-1] 14A-D are diagrams showing the characterization of RSV G mid-domain peptide (Gcc) conjugated to ferritin nanoparticles. (FIG. 14A) Coomassie-stained SDS-PAGE gel showing click conjugation of RSV G mid-domain (SEQ ID NO: 29) to ferritin nanoparticles to form the Gcc-NP antigen. (FIG. 14B) Structural model of Gcc-NP. (FIG. 14C) Comparison of Gcc-binding antibody responses elicited by immunization with Gcc peptide alone (Gcc peptide, SEQ ID NO: 29) versus Gcc peptide conjugated to nanoparticles (Gcc-NP) in a mouse study. Representative responses from naive serum are shown in white boxes, responses from after the second immunization are shown in light gray boxes, and responses from after the third immunization are shown in dark gray boxes. (FIG. 14D) Comparison of RSV neutralization titers elicited by immunization with Gcc peptide (SEQ ID NO: 29) versus Gcc-NP in a mouse study after the third injection, as measured by HAE cell assay. Sera from naive animals and from animals immunized with the Gcc peptide were pooled and titers are shown as bars. [Figure 14-2] Continued from Figure 14-1. [Figure 15-1]Figures 15A-C show that co-administration of RSV Pre-F-NP (RF8140) and Gcc-NP induces a neutralizing response. Mice were immunized with Pre-F-NP (RF8140) alone, Gcc-NP alone, or Pre-F-NP and Gcc-NP combined at a dose of 1 μg per antigen. All immunizations were adjuvanted with AF03 as described above. (Figure 15A) Immunization of mice with RF8140 alone (Pre-F-NP) or RF8140 and Gcc-NP (Pre-F-NP + Gcc-NP) induced antibodies that bind to the pre-fusion F trimer. (Figure 15B) Immunization of mice with Gcc-NP alone (Gcc-NP) or RF8140 and Gcc-NP (Pre-F-NO + Gcc-NP) induced antibodies that bind to the Gcc peptide. (FIG. 15C) Animals immunized with either Pre-F-NP alone, Gcc-NP alone, or co-administration of Pre-F-NP and Gcc-NP induce neutralizing responses after the second and third immunizations as measured by HAE neutralization assay. Co-administration of Pre-F-NP+Gcc-NP induced a neutralizing response superior to that induced by immunization with Pre-F-NP alone. [Figure 15-2] Continued from Figure 15-1. [Figure 16]Figures 16A-B show that co-administration of Pre-F-NPs and Gcc-NPs does not interfere with the induction of antibodies that bind to Pre-fusion F trimers or Gcc-nanoparticles. Neutralization titers measured by F-sensitive VERO cell assays are shown on the left side of Figure 16A, and neutralization titers measured by F- and G-sensitive HAE assays are shown on the right side of Figure 16B. Immunization of animals was similar to Figure 15. RSV polypeptides used for immunization are below the horizontal axis. Black bars represent pooled sera from immunized groups described in Figure 15 and are labeled similarly. Sera from untreated animals are also shown in black bars and are displayed for comparison. Sera depleted with pre-fusion F trimers are shown in white and to the right of the corresponding black bars. Sera depleted with G ectodomain are shown in diagonally striped bars just to the right of the corresponding black bars. Sera depleted with pre-fusion F trimers and subsequently depleted with G ectodomain are shown in vertically striped bars. (FIG. 16A) Neutralizing titers were observed in VERO cell assays for sera from RF8140 immunization and RF8140+Gcc-NP coadministration, but not for naive sera or sera from Gcc-NP immunization alone. Depletion of sera from RF8140 or RF8140+Gcc-NP groups with pre-fusion F trimer reduced measurable neutralizing titers. (FIG. 16B) Neutralizing titers were observed in HAE cell assays for sera from animals immunized with RF8140, Gcc-NP, or RF8140 coadministered with Gcc-NP. Sera from naive animals showed no neutralizing response. Sera from animals immunized with RF8140 depleted with pre-fusion F trimer show reduced measurable neutralizing titers. Sera from animals immunized with Gcc-NP depleted with G ectodomain show reduced measurable neutralizing titers. Sera from animals immunized with coadministration of RF8140 and Gcc-NP show no measurable reduction in neutralizing titers when depleted of pre-fusion F trimer alone, but show measurable reduction in neutralizing titers when depleted of both pre-fusion F trimer and G ectodomain. Collectively, these data suggest that coadministration of Pre-F-NP and Gcc-NP does not interfere with the respective abilities of the antigens to elicit neutralizing antibodies against pre-fusion F or G. [Figure 17] Figures 17A-B show that adjuvanting RF8117 or RF8140 with AF03, SPA09 or alum induces superior neutralizing responses in mice compared to non-adjuvanted RF8117. (Figure 17A) Neutralizing titers of sera from mice immunized with either non-adjuvanted (No Adj), alum-adjuvanted or AF03-adjuvanted RF8117 are shown as measured by VERO cell assay. (Figure 17B) Neutralizing titers of sera from mice immunized with either non-adjuvanted (No Adj), SPA09-adjuvanted RF8117, or AF03-adjuvanted RF8140 are shown as measured by VERO cell assay. In all cases, either RF8117 or RF8140, higher neutralizing titers were elicited in the adjuvanted groups of naive mice than in the non-adjuvanted non-groups. [Figure 18-1] Figures 18A-B: Adjuvanting RF8140 with AF03 or SPA09 induces superior neutralizing responses in non-human primates (NHPs) compared to unadjuvanted F8140 immunization. (Figure 18A) Prefusion F trimer responses measured in NHP sera following immunization with RF8140 either unadjuvanted (No Adj), adjuvanted with AF03 or adjuvanted with SPA09 (2 doses of SPA09 were used as indicated below) as measured by ELISA. At all time points, adjuvanting with AF03 or SPA09 induces superior neutralizing responses. (FIG. 18B) Neutralizing titers of sera from NHPs immunized with RF8140 either unadjuvanted (No Adj), adjuvanted with AF03, or adjuvanted with SPA09 (two doses of SPA09 were used, as shown below) were measured by VERO cell assay. In all cases, immunization with adjuvanted RF8140 induces higher neutralizing titers than the non-adjuvanted groups at all time points. [Figure 18-2] Continued from Figure 18-1. [Figure 19]Figures 19A-B show that conjugation of RF8140 to the TLR7 / 8 agonist SM7 / 8 or the TLR9 agonist CpG induces superior pre-fusion F binding titers compared to unadjuvanted RF8140 alone. (Figure 19A) Pre-fusion F trimer binding responses measured in serum from either naive mice, mice immunized with unadjuvanted RF8140, mice immunized with RF8140 conjugated to SM7 / 8 adjuvant, RF8140 adjuvanted with 130ng SM7 / 8, or RF8140 adjuvanted with 20μg SM7 / 8 are shown. RF8140 conjugated to SM7 / 8 induces higher pre-fusion F trimer binding titers than the unadjuvanted or SM7 / 8 adjuvanted groups. (FIG. 19B) Pre-fusion F trimer binding responses measured in serum from naive mice, mice immunized with unadjuvanted RF8140, RF8140 conjugated to CpG adjuvant, RF8140 adjuvanted with 680 ng of CpG, or RF8140 adjuvanted with 20 μg of SM7 / 8. RF8140 conjugated to SM7 / 8 induces higher pre-fusion F trimer binding titers than the unadjuvanted or SM7 / 8 adjuvanted groups. [Figure 20-1]Figure 20A-G. F subunit vaccine candidates induce pre-F directed neutralizing antibodies and Th1 CD4+ T cell responses in the MIMIC system. (Figure 20A) Anti-pre-F titers in the MIMIC system were measured by AF after priming with molar equivalent concentrations of F for each Ag at 10 ng / ml Pre-F NPs (n=48-49 donors / group). (Figure 20B) Microneutralization titers were measured and expressed in international units / ml (IU / ml). (Figure 20C) Anti-pre-F to post-F ratios >1 represent higher levels of pre-F binding antibodies compared to post-F binding antibodies, whereas ratio values ​​<1 represent greater antibody responses to post-F. (Figure 20D) TNFα production in activated CD154+ / CD4+ T cells restimulated with F protein-loaded target cells was measured using flow cytometry (n=48). Statistical significance was determined by Tukey-Kramer-HSD multiple comparisons. (Figure 20E) Pre-existing antibody titers (serostatus) in human subjects strongly correlate with the magnitude of RSV immune response in the MIMIC system. Linear regression plots showing anti-Pre-F IgG in serum from each donor versus total anti-Pre-F IgG response were generated by software or algorithm and p-values ​​for common slopes were analyzed by statistical methods (n=50). The Y-axis represents anti-Pre-F IgG levels obtained after priming with RSV. (Figure 20F) Linear regression plots similar to Figure 20E showing anti-Pre-F IgG versus total anti-Pre-F IgG in serum from each donor after priming with F subunit vaccine candidate (Post-F is square, Pre-F-NP is circle, and DC-Cav1 is diamond). Pre-existing circulating titers of anti-Pre-IgF IgG ranged from 199,800 to 3,037,600,000. Each donor represents the IgG value of each donor. (Figure 20G) Comparison of Gcc-binding antibody responses induced by treatment with Gcc peptide alone (Gcc peptide) versus Gcc peptide conjugated to nanoparticles (Gcc-NP) in human B cells. As above, a no treatment group is shown for comparison. [Figure 20-2] Continued from Figure 20-1. [Figure 20-3] Continued from Figure 20-2. [Figure 20-4] Continued from Figure 20-3. [Figure 21] 21A-C show neutralizing antibody titers induced by low doses (0.5 μg) of RSV Gcc-ferritin nanoparticles ("Gcc-NPs"). Using naive and hyperimmune sera as negative and positive controls, the RSV A strain HAE neutralization titers induced by immunization with RSV Gcc-NPs containing the RSV A2 Gcc sequence (formulated with AF03) are shown from sera collected 2 weeks after the second immunization (2wp2) (FIG. 21A) or 2 weeks after the third immunization (2wp3) (FIG. 21B). Also shown are RSV B strain HAE neutralization titers induced by immunization with RSV Gcc-NPs containing the RSV A2 Gcc sequence (formulated with AF03) from sera collected 2 weeks after the third immunization (2wp3) (FIG. 21C). [Figure 22] Figures 22A-B show the RSV A2 strain antigen-binding antibody response induced by RSV Gcc-NP. (Figure 22A) Gcc-binding antibody response induced against the Gcc A2 strain measured 2 weeks after the second injection (light gray frame) and 2 weeks after the third injection (dark gray frame) induced by high dose (5 μg) RSV Gcc-NP. Serum response of untreated mice is shown as a negative control. (Figure 22B) Gcc-binding antibody response induced against the Gcc A2 strain measured 2 weeks after the second injection (light gray frame) and 2 weeks after the third injection (dark gray frame) induced by low dose (0.5 μg) RSV Gcc-NP. [Diagram 23]Figures 23A-B show the RSV B1 strain antigen-binding antibody response induced by RSV Gcc-NP. (Figure 23A) Gcc-binding antibody response induced against the Gcc B1 strain measured 2 weeks after the second injection (light gray frame) and 2 weeks after the third injection (dark gray frame) induced by high dose (5 μg) RSV Gcc-NP. Serum response of untreated mice is shown as a negative control. (Figure 23B) Gcc-binding antibody response induced against the Gcc B1 strain measured 2 weeks after the second injection (light gray frame) and 2 weeks after the third injection (dark gray frame) induced by low dose (0.5 μg) RSV Gcc-NP. DETAILED DESCRIPTION OF THE PREFERRED EMBODIMENTS

[0061] RSV polypeptides may be antigenic when administered alone, with an adjuvant as a separate molecule, and / or as part of a nanoparticle (e.g., ferritin particles or lumazine synthase particles), and may be self-adjuvanting. In some embodiments, the antigenic RSV polypeptide comprises an RSV F polypeptide and ferritin, and / or an RSV F polypeptide in which an epitope of the RSV polypeptide shared between pre-fusion RSV F and post-fusion RSV F is blocked. RSV F polypeptides that induce the production of antibodies against the pre-fusion conformation of RSV F induced a higher in vivo antibody response to pre-fusion RSV F compared to post-fusion RSV F. Also described herein are RSV G polypeptides that contain all or a portion of RSV G, and can further include ferritin. RSV G and RSV F proteins are essential for RSV attachment and fusion to host cells.

[0062] RSV F exists in two conformational states: prefusion and postfusion conformations. In the natural prefusion state, RSV F is a trimer composed of three promoters. Thus, immunization with the RSV F polypeptide in a prefusion conformation may have improved properties. In some embodiments, RSV The F polypeptide is designed to induce immunity to RSV F in the prefusion conformation. RSV G is a binding protein involved in the association of RSV with human airway epithelial cells.

[0063] A.Definition "Antigenic site 0" or "site 0 epitope," as used herein, refers to a site located at the apex of the pre-fusion RSV F trimer, including amino acid residues 62-69 and 196-209 of wild-type RSV F (SEQ ID NO: 26). The site 0 epitope is a binding site for antibodies with specificity for pre-fusion RSV F, such as D25 and AM14, whose binding to the site 0 epitope blocks cell surface attachment of RSV (see McLellan et al., Science 340(6136):1113-1117 (2013)).

[0064] As used herein, "antigen stability" refers to the stability of an antigen over time or in solution.

[0065] As used herein, "cavity-filling substitution" refers to an engineered hydrophobic substitution that fills the cavity present in the pre-fusion RSV F trimer.

[0066] "F protein" or "RSV F protein" refers to a protein of RSV involved in promoting fusion of the viral envelope with the host cell membrane during viral entry.

[0067] "RSV polypeptide" or "F polypeptide" refers to a polypeptide that contains at least one epitope of the F protein.

[0068] "Glycan addition", as used herein, refers to the addition of a mutation that introduces a glycosylation site that is not present in wild-type RSV F, which can be engineered to increase expression of the construct, increase the stability of the construct, or block an epitope shared between the pre-fusion and post-fusion conformations. Modified proteins containing glycan addition have more glycosylation and therefore a higher molecular weight. Glycan addition can reduce the extent to which the RSV F polypeptide induces antibodies against the post-fusion conformation of RSV F.

[0069] "G protein" or "RSV G protein" as used herein refers to a binding protein involved in the association of RSV with human airway epithelial cells. An exemplary wild-type RSV G amino acid sequence is provided as SEQ ID NO:27. The RSV G protein contains an ectodomain (approximately amino acids 66-297 of RSV G (SEQ ID NO:27)) that is present outside the cell. Within the ectodomain of RSV G is a central conserved region (Gcc or CCR, approximately amino acids 151-193 of SEQ ID NO:27). The CCR of RSV G contains a CX3C motif. The CX3C motif mediates binding of the G protein to the CX3CR1 receptor.

[0070] "Helix PRO capping" or "helix proline capping", as used herein, refers to the fact that when the helix cap contains a proline, it can stabilize helix formation.

[0071] As used herein, a "promoter stabilizing substitution" refers to a promoter of the RSV F trimer. Amino acid substitutions in RSV are described that stabilize the prefusion conformation by stabilizing interactions within the promoter.

[0072] As used herein, "promoter-stabilizing substitutions" refer to amino acid substitutions in RSV that stabilize the pre-fusion conformation by stabilizing the interaction of the RSV F trimer promoter with each other.

[0073] "Protease cleavage," as used herein, refers to the proteolysis (sometimes referred to in the art as "clipping") of a susceptible residue (eg, lysine or arginine) in a polypeptide sequence.

[0074] "Post-fusion," as used herein in reference to RSV F, refers to the stable conformation of RSV F that occurs after fusion of the viral and cellular membranes.

[0075] "Prefusion", as used herein in reference to RSV F, refers to the conformation of RSV F that is adopted prior to virus-cell interaction.

[0076] "Protomer" as used herein refers to a structural unit of an oligomeric protein. In the case of RSV F, the individual units of the RSV F trimer are promoters.

[0077] "Ferritin" or "ferritin protein" as used herein refers to a protein that has detectable sequence identity with H. pylori ferritin (SEQ ID NO: 208 or 209), or another ferritin discussed herein, such as P. furiosus ferritin, Trichoplusia ni ferritin, or human ferritin, and serves to store iron, for example, within cells or tissues, or to transport iron to the bloodstream. Such exemplary ferritins, including ferritins that exist as two polypeptide chains known as heavy and light chains (e.g., Trichoplusia ni and human ferritin), are discussed in detail below. In some embodiments, the ferritin comprises a sequence having at least 15%, 20%, 30%, 40%, 50%, 60%, 70%, 75%, 80%, 85%, 90%, 95%, 97%, 98%, 99%, or 99.5% identity to a ferritin sequence disclosed herein, for example, in Table 1 (Sequence Listing). The ferritin can be a fragment of a full-length naturally occurring sequence.

[0078] "Wild-type ferritin" as used herein refers to ferritin whose sequence consists of a naturally occurring sequence. Ferritin also includes full-length ferritin or a fragment of ferritin that has one or more differences in its amino acid sequence from wild-type ferritin.

[0079] As used herein, "ferritin monomer" refers to a single ferritin molecule (e.g., a single ferritin heavy or light chain, as applicable) that is not assembled with other ferritin molecules. "Ferritin multimer" includes multiple associated ferritin monomers. "Ferritin protein" includes monomeric ferritin and multimeric ferritin.

[0080] As used herein, "ferritin particle" refers to ferritin self-assembled into a spherical form. Ferritin particles are sometimes referred to as "ferritin nanoparticles" or simply "nanoparticles." In some embodiments, the ferritin particle comprises 24 ferritin monomers (or 24 total heavy and light chains, if applicable).

[0081] "Hybrid ferritin" as used herein refers to a ferritin that comprises H. pylori ferritin with an amino-terminal extension of bullfrog ferritin. An exemplary sequence used as the amino-terminal extension of ferritin is shown as SEQ ID NO: 217. In the hybrid ferritin, the amino-terminal extension of bullfrog ferritin can be fused to H. pylori ferritin so that the binding sites of the immunostimulatory moiety are evenly distributed on the ferritin particle surface. "Bullfrog linker" as used herein is a linker that includes the sequence of SEQ ID NO: 217. Hybrid ferritins are also sometimes called "bfpFerr" or "bfp ferritin". Any construct that includes bullfrog sequences can be provided without bullfrog sequences, for example without linkers or alternative linkers. Exemplary bullfrog linker sequences are provided in Table 1. Although Table 1 shows bullfrog linkers, the same constructs can be made without linkers or alternative linkers.

[0082] "N-glycan," as used herein, refers to a carbohydrate chain attached to a protein at the amide nitrogen of an N (asparagine) residue of the protein. Thus, an N-glycan is formed by the process of N-glycosylation. The glycan may be a polysaccharide.

[0083] "Glycosylation," as used herein, refers to the addition of carbohydrate units to a protein.

[0084] "Immune response" as used herein refers to the response of cells of the immune system, such as B cells, T cells, dendritic cells, macrophages, or polymorphonuclear cells, to a stimulus, such as an antigen or a vaccine. An immune response can include any cell of the body involved in a host defense response, including, for example, epithelial cells that secrete interferons or cytokines. An immune response includes, but is not limited to, innate and / or adaptive immune responses. As used herein, a "protective immune response" refers to an immune response that protects a subject from infection (e.g., prevents infection or prevents the development of a disease associated with an infection). Methods for measuring immune responses are well known in the art and include, for example, measuring lymphocyte (e.g., B or T cell) proliferation and / or activity, cytokine or chemokine secretion, inflammation, antibody production, and the like. An "antibody response" is an immune response in which antibodies are produced.

[0085] As used herein, "antigen" refers to an agent that elicits an immune response when exposed to or administered to an organism, and / or to which a T cell receptor (e.g., when presented by an MHC molecule) binds, or to which an antibody (e.g., when produced by a B cell) binds. In some embodiments, the antigen elicits a humoral response in the organism (e.g., including the production of antigen-specific antibodies). Alternatively or additionally, in some embodiments, the antigen elicits a cellular response in the organism (e.g., including T cells whose receptors specifically interact with the antigen). A particular antigen may elicit an immune response in one or some members of a target organism (e.g., mice, rabbits, primates, humans), but not in all members of the target organism's species. In some embodiments, the antigen induces an immune response in at least about 25%, 30%, 35%, 40%, 45%, 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, 99% of members of the target species. In some embodiments, the antigen binds to an antibody and / or a T cell receptor, but may or may not induce a specific physiological response in the organism. In some embodiments, for example, the antigen may bind to an antibody and / or a T cell receptor in vitro, regardless of whether such an interaction occurs in vivo. In some embodiments, the antigen reacts with the products of specific humoral or cellular immunity, including those induced by heterologous immunogens. Antigens include antigenic ferritin proteins, including ferritin (e.g., containing one or more mutations) and non-ferritin polypeptides (e.g., RSV polypeptides) described herein.

[0086] "Immunostimulatory moiety," as used herein, refers to a moiety that can be covalently attached to ferritin or an antigenic ferritin polypeptide and activate a component of the immune system (either alone or when attached to a ferritin or antigenic ferritin polypeptide). Exemplary immunostimulatory moieties include agonists of toll-like receptors (TLRs), e.g., TLR4, 7, 8, or 9. In some embodiments, the immunostimulatory moiety is an adjuvant.

[0087] "Adjuvant" as used herein refers to a substance or vehicle that non-specifically enhances the immune response to an antigen. Adjuvants can include, but are not limited to, suspensions of minerals (e.g., alum, aluminum hydroxide, or phosphates) to which antigens are adsorbed, water-in-oil or oil-in-water emulsions in which antigen solutions are emulsified in mineral oil or water (e.g., Freund's incomplete adjuvant). Sometimes, killed mycobacteria (e.g., Freund's complete adjuvant) are included to further enhance antigenicity. Immunostimulatory oligonucleotides (e.g., CpG motifs) can also be used as adjuvants (see, for example, U.S. Patent Nos. 6,194,388; 6,207,646; 6,214,806; 6,218,371; 6,239,116; 6,339,068; 6,406,705; and 6,429,199).Adjuvants can also include biological molecules such as Toll-Like Receptor (TLR) agonists and costimulatory molecules.Adjuvants can be administered as separate molecules in compositions or covalently bound (conjugated) to ferritin or antigenic ferritin polypeptides.

[0088] "Antigenic RSV polypeptide" as used herein refers to a polypeptide that contains all or a portion of the RSV amino acid sequence of sufficient length that the molecule is antigenic with respect to RSV. Antigenicity can be a feature of the RSV sequence as part of a construct that further contains a heterologous sequence, such as ferritin, and / or an immunostimulatory moiety. That is, when the RSV sequence is part of a construct that further contains a heterologous sequence, it is sufficient that the construct can serve as an antigen to generate anti-RSV antibodies, regardless of whether the RSV sequence without the heterologous sequence can do so.

[0089] "Antigenic ferritin polypeptide" and "antigenic ferritin protein" are used interchangeably herein and refer to a polypeptide that includes ferritin and non-ferritin polypeptides of sufficient length that the molecule is antigenic with respect to the non-ferritin polypeptide. The antigenic ferritin polypeptide may further include an immunostimulatory moiety. Antigenicity may be a feature of the non-ferritin sequence as part of a larger construct. That is, the construct is sufficient to be able to act as an antigen for the non-ferritin polypeptide, regardless of whether the non-ferritin polypeptide (and, if applicable, the immunostimulatory moiety) without ferritin can do so. In some embodiments, the non-ferritin polypeptide is an RSV polypeptide, in which case the antigenic ferritin polypeptide is also an "antigenic RSV polypeptide". However, for clarity, the antigenic RSV polypeptide does not have to include ferritin. "Antigenic polypeptide" as used herein refers to a polypeptide that is either or both of an antigenic ferritin polypeptide and an antigenic RSV polypeptide.

[0090] "Self-adjuvanting" as used herein refers to a composition or polypeptide that includes ferritin and an immunostimulatory moiety directly conjugated to the ferritin, such that the ferritin and immunostimulatory moiety are in the same molecular entity. Antigenic ferritin polypeptides, including non-ferritin polypeptides, may be conjugated to an immunostimulatory moiety to generate a self-adjuvanting polypeptide.

[0091] A "surface-exposed" amino acid, as used herein, refers to an amino acid residue in a protein (e.g., ferritin) that has a side chain that is accessible to solvent molecules when the protein is in its native three-dimensional conformation after multimerization, if applicable. Thus, for example, in the case of ferritin that forms a 24-mer, a surface-exposed amino acid residue is one whose side chain is accessible to solvent when the ferritin assembles as a 24-mer, e.g., as a ferritin multimer or ferritin particle.

[0092] As used herein, a "subject" refers to any member of the animal kingdom. In some embodiments, a "subject" refers to a human. In some embodiments, a "subject" refers to a non-human animal. In some embodiments, a subject includes, but is not limited to, a mammal, a bird, a reptile, an amphibian, a fish, an insect, and / or a worm. In certain embodiments, a non-human subject is a mammal (e.g., a rodent, a mouse, a rat, a rabbit, a monkey, a dog, a cat, a sheep, a cow, a primate, and / or a pig). In some embodiments, a subject may be a transgenic animal, a genetically engineered animal, and / or a clone. In certain embodiments of the invention, a subject is an adult, an adolescent, or a juvenile. In some embodiments, the terms "individual" or "patient" are used interchangeably and are intended to be interchangeable with "subject."

[0093] As used herein, the term "vaccination" or "vaccinate" refers to the administration of a composition intended to generate an immune response, for example, against a pathogen. Vaccination can be administered before, during, and / or after exposure to a pathogen and / or the development of one or more symptoms, and in some embodiments, before, during, and / or immediately after exposure to a pathogen. In some embodiments, vaccination includes multiple administrations of a vaccination composition at appropriate intervals.

[0094] The present disclosure describes nucleic acid and amino acid sequences that have a certain degree of identity to a given nucleic acid or amino acid sequence, respectively (a reference sequence).

[0095] "Sequence identity" between two nucleic acid sequences refers to the percentage of nucleotides identified between the sequences. "Sequence identity" between two amino acid sequences refers to the percentage of amino acids that are identical between the sequences.

[0096] The term "% identical", "% identity" or similar terms is intended to refer to the percentage of nucleotides or amino acids that are identical, particularly in optimal alignment between the sequences being compared. Said percentage is purely statistical, and the differences between the two sequences may be distributed over the entire length of the sequences being compared, but not necessarily randomly. Comparison of two sequences is usually performed by comparing said sequences over segments or "comparison windows" after optimal alignment in order to identify local regions of corresponding sequences. Optimal alignment for comparison can be performed manually or using the Smith and Waterman, 1981, Ads App. Math. 2, 482, with the aid of the local homology algorithm of Needleman and Wunsch, 1970, J. Mol. Biol. 48, 443, with the aid of the similarity search algorithm of Pearson and Lipman, 1988, Proc. Natl Acad. Sci. USA 88, 2444, or with the aid of computer programs which use said algorithms (GAP, BESTFIT, FASTA, BLAST P, BLAST N, and TFASTA, in Wisconsin Genetics Software Package, Genetics Computer Group, 575 Science Drive, Madison, Wis.).

[0097] Percentage identity determines the number of identical positions that the compared sequences correspond to; This number is obtained by dividing by the number of positions being compared (eg, the number of positions in a reference sequence) and multiplying this result by 100.

[0098] In some embodiments, the degree of identity is given for a region that is at least about 50%, at least about 60%, at least about 70%, at least about 80%, at least about 90%, or about 100% of the full length of the reference sequence.For example, if the reference nucleic acid sequence is 200 nucleotides, the degree of identity is given for at least about 100, at least about 120, at least about 140, at least about 160, at least about 180, or about 200 nucleotides, in some embodiments, consecutive nucleotides.In some embodiments, the degree of identity is given over the full length of the reference sequence.

[0099] A nucleic acid sequence or amino acid sequence that has a certain degree of identity to a given nucleic acid sequence or amino acid sequence, respectively, can have at least one functional property of the given sequence, for example, in some cases, is functionally equivalent to the given sequence.One important property includes, in particular, the ability to act as a cytokine when administered to a subject.In some embodiments, a nucleic acid sequence or amino acid sequence that has a certain degree of identity to a given nucleic acid sequence or amino acid sequence is functionally equivalent to the given sequence.

[0100] As used herein, the term "kit" refers to a packaged set of one or more compounds or related components, such as compositions, and one or more associated materials, such as solvents, solutions, buffers, instructions, or desiccants.

[0101] B. Antigenic RSV Polypeptides Containing an RSV F Polypeptide Containing One or More Asparagines at Particular Positions Provided herein is an antigenic RSV polypeptide comprising an RSV F polypeptide. The RSV F polypeptide may comprise the entire sequence of RSV F or a portion of RSV F. In some embodiments, an epitope of an RSV polypeptide shared between pre-fusion RSV F and post-fusion RSV F is blocked. Blocking the epitope reduces or eliminates the production of antibodies against the epitope when the antigenic RSV polypeptide is administered to a subject. This can increase the proportion of antibodies targeting epitopes specific to a particular conformation of F, such as the pre-fusion conformation. Since F has a pre-fusion conformation in a virus that has not yet entered a cell, an increased proportion of antibodies targeting pre-fusion F can provide a higher degree of neutralization (e.g., expressed as a neutralization-to-binding ratio, as described herein). Blocking can be achieved by engineering bulky moieties, such as N-glycans, in the vicinity of the shared epitope. For example, an N-glycosylation site not present in wild-type F can be added, for example, by mutating the appropriate residue to asparagine. In some embodiments, the blocked epitope is an epitope of antigenic site 1 of RSV F. In some embodiments, two or more epitopes shared between pre-fusion RSV F and post-fusion RSV F are blocked. In some embodiments, two or more epitopes of antigenic site 1 of RSV F are blocked. In some embodiments, one or more or all epitopes that topologically overlap with the blocked epitope are also blocked, and optionally the blocked epitope is an epitope of antigenic site 1 of RSV F.

[0102] In some embodiments, the RSV F polypeptide comprises an asparagine corresponding to positions 328, 348, or 507 of SEQ ID NO: 26. In some embodiments, the polypeptide comprises an asparagine corresponding to at least two of positions 328, 348, or 507 of SEQ ID NO: 26. In some embodiments, the polypeptide comprises an asparagine corresponding to positions 328, 348, or 507 of SEQ ID NO: 26. As described in the Examples, such asparagines can be used to It has been found that lagin can function as a glycosylation site. Furthermore, without wishing to be bound by any particular theory, glycans at these sites can inhibit the development of antibodies against nearby epitopes, including epitopes common to pre-fusion and post-fusion RSV F proteins, when the polypeptide is administered to a subject. In some embodiments, glycosylation of asparagine corresponding to positions 328, 348, or 507 of SEQ ID NO: 26 blocks at least one epitope shared between pre-fusion RSV F and post-fusion RSV F, such as the antigenic site 1 epitope. Inhibiting the development of antibodies against epitopes common to pre-fusion and post-fusion RSV F proteins can be beneficial because it can lead to the development of antibodies against epitopes specific to pre-fusion RSV F proteins, such as the site 0 epitope, which may have more effective neutralizing activity than antibodies against other RSV F epitopes. The site 0 epitope includes amino acid residues 62-69 and 196-209 of SEQ ID NO: 26. Thus, in some embodiments, the RSV F polypeptide includes amino acid residues 62-69 and 196-209 of SEQ ID NO:26.

[0103] It should be noted that the constructs described herein may have deletions or substitutions of different lengths relative to wild-type RSV F. For example, in SEQ ID NO:23 and other constructs, positions 98-144 of the wild-type sequence (SEQ ID NO:26) are replaced with GSGNVGL (positions 98-104 of SEQ ID NO:23; also SEQ ID NO:31), resulting in a net deletion of 40 amino acids, such that positions 328, 348, or 507 of SEQ ID NO:26 correspond to positions 288, 308, and 467 of SEQ ID NO:23. In general, positions in the constructs described herein can be mapped onto the wild-type sequence of SEQ ID NO:26 by pairwise alignment, for example, using the NEEDLEMAN-WUNSCH algorithm with standard parameters (EBLOSUM62 matrix, gap penalty 10, gap extension penalty 0.5). See also the structural alignment discussion provided herein as an alternative approach to identify corresponding positions.

[0104] In some embodiments, the RSV F polypeptide comprises a mutation that adds a glycan to block an epitope on a pre-fusion antigen that is structurally similar to an epitope on the surface of post-fusion RSV F. In some embodiments, the glycan is added to specifically block an epitope that may be present in the post-fusion conformation of RSV F. In some embodiments, a glycan is added that blocks one or more epitopes that may be present in the post-fusion conformation of RSV F but do not affect the site 0 epitope that is present in the pre-fusion conformation of RSV F.

[0105] In some embodiments, glycans added at one or more of the glycosylation sites discussed above increase secretion in an expression system, such as a mammalian cell, relative to other constructs.

[0106] In some embodiments, the RSV F polypeptide comprises a sequence having at least 85%, 90%, 95%, 97%, 98%, 99%, or 99.5% identity to amino acids 1-478 of SEQ ID NO: 17. In some embodiments, the RSV F polypeptide comprises a sequence having at least 85%, 90%, 95%, 97%, 98%, 99%, or 99.5% identity to the sequence of SEQ ID NO: 17. In some embodiments, the RSV F polypeptide comprises amino acids 1-478 of SEQ ID NO: 17. In some embodiments, the RSV F polypeptide comprises the sequence of SEQ ID NO: 17.

[0107] In some embodiments, the RSV F polypeptide comprises a sequence having at least 85%, 90%, 95%, 97%, 98%, 99%, or 99.5% identity to amino acids 1-478 of SEQ ID NO: 23. In some embodiments, the RSV F polypeptide comprises a sequence having at least 85%, 90%, 95%, 97%, 98%, 99%, or 99.5% identity to amino acids 1-478 of SEQ ID NO: 23. In some embodiments, the RSV F polypeptide comprises amino acids 1-478 of SEQ ID NO: 23. In some embodiments, the RSV F polypeptide comprises the sequence of SEQ ID NO: 23.

[0108] In some embodiments, the RSV F polypeptide comprises the DS-CAV1 sequence (e.g., as described in McLellan, JS et al., Science 342(6158):592-598 (2013)) (SEQ ID NO:25), which is further modified to include at least one, two, or three of the asparagines described above.

[0109] In some embodiments, the polypeptide further comprises a ferritin protein, which can further comprise any of the features, or a combination thereof, described below in the section regarding ferritin.

[0110] The RSV F polypeptide can further include any of the additional features described in the following discussion, or any operable combination of such features.

[0111] single stranded construct In some embodiments, the RSV polypeptide is a single chain construct, e.g., a RSV polypeptide lacking a furin cleavage site. In some embodiments, the RSV F lacks one or more furin cleavage sites. Constructs lacking a furin cleavage site are expressed as a single polypeptide that is not cleaved into the biological F1 / F2 fragment of the native F protein.

[0112] Amino acid substitutions In some embodiments, the RSV F comprises a single amino acid substitution relative to the wild-type sequence. In some embodiments, the RSV F comprises more than one amino acid substitution relative to the wild-type sequence, for example, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, or 15 substitutions. An exemplary wild-type sequence is SEQ ID NO:26.

[0113] In some embodiments, the amino acid substitution or amino acid substitution pair is an interprotomer stabilizing substitution(s). Exemplary substitutions that may be interprotomer stabilizing are V207L; N228F; I217V and E218F; I221L and E222M; or Q224A and Q225L, using the position numbers of SEQ ID NO:26.

[0114] In some embodiments, the amino acid substitution or pair of amino acid substitutions is intraprotomer stabilizing. Exemplary substitutions that may be intraprotomer stabilizing are V220I; and A74L and Q81L, using the position numbering of SEQ ID NO:26.

[0115] In some embodiments, the amino acid substitutions are predicted to be helix stabilizing, i.e., to stabilize the helix domain of RSV F. Stabilization of the helical domain may generally contribute to stabilization of the site 0 epitope and stabilization of the pre-fusion conformation of RSV F. Exemplary substitutions that may be helix stabilizing are N216P or I217P, using the position numbers of SEQ ID NO:26.

[0116] In some embodiments, the amino acid substitution is helix capping. In some embodiments, the amino acid substitution is helix PRO capping. Helix capping is based on biophysical observations that mutation of a proline residue in an alpha helix can disrupt helix formation, while a proline at the N-terminus of a helical region can help induce helix formation by stabilizing the PHI / PSI bond angle. An exemplary substitution that may be a helix capping is N 216P or I217P.

[0117] In some embodiments, the amino acid substitutions are substituted with disulfide mutations of DS-CAV1. In some embodiments, the engineered disulfides of DS-CAV1 are reverted to wild type (C69S and / or C212S mutations of DS-CAV1) using the position number of SEQ ID NO: 26. In some embodiments, one or more C residues of DS-CAV1 are substituted with S residues to eliminate disulfide bonds. In some embodiments, the C69S or C212S substitutions using the position number of SEQ ID NO: 26 eliminate disulfide bonds. In some embodiments, the RSV F polypeptide comprises both C69S and C212S using the position number of SEQ ID NO: 26. In some embodiments, such substitution of cysteines, thereby eliminating disulfide bonds, blocks the reduction (i.e., acceptance of electrons from a reducing agent) of the RSV F polypeptide. In some embodiments, the I217P substitution using the position number of SEQ ID NO: 26 is included in the antigen in place of substitution with C69 and / or C212. Position 217 of SEQ ID NO:26 corresponds to position 177 of SEQ ID NO:23.

[0118] In some embodiments, the amino acid substitutions prevent proteolysis by trypsin or trypsin-like proteases. In some embodiments, the amino acid substitutions that prevent such proteolysis are in the heptad repeat region B (HRB) region of RSV F. The appearance of fragments consistent with proteolysis of RSV F-ferritin constructs containing wild-type HRB regions suggests that lysine or arginine in this region is a target of proteolysis. Amino acid substitutions that exclude K or R residues are referred to as knockouts (KO). In some embodiments, K or R is replaced with L or Q. In some embodiments, K is replaced with L or Q. In some embodiments, the RSV F polypeptide comprises K498L and / or K508Q using the position numbering of SEQ ID NO:26. The corresponding positions in SEQ ID NO:23 are 458 and 468, respectively. In some embodiments, the RSV F polypeptide comprises both K498L and K508Q.

[0119] In some embodiments, the amino acid substitutions add glycans. In some embodiments, the amino acid substitutions increase glycosylation by adding glycans to the RSV F polypeptide. Substitutions to add glycans are also referred to as engineered glycosylation, as compared to native glycosylation (no additional glycans).

[0120] In some embodiments, the amino acid substitution to add the glycan was a substitution with N. In some embodiments, the amino acid substitution with N allows for N-linked glycosylation. In some embodiments, the substitution with N is accompanied by a substitution with T or S at the second amino acid position C-terminal to N to form an NxT / S glycosylation motif. In some embodiments, N is surface exposed. As shown in the examples below, mutations that increase glycosylation can provide increased expression of polypeptides, including RSV F polypeptides.

[0121] Changes in the properties of the RSV F polypeptide based on modifications Modification of the amino acid sequence of RSV F can change the properties of the RSV F polypeptide. The properties of the RSV F polypeptide can include structural or functional characteristics of the RSV F polypeptide.

[0122] In some embodiments, a single modification to an amino acid sequence alters multiple properties of a RSV F polypeptide. In some embodiments, a RSV F polypeptide can include multiple modifications that alter different properties of the RSV F polypeptide. In some embodiments, multiple modifications result in a greater change in the properties of the RSV F polypeptide.

[0123] In some embodiments, multiple modifications can have an additive effect on a particular property, For example, two amino acid substitutions to add glycans can result in a greater increase in glycosylation of the RSV F polypeptide compared to any single amino acid substitution.

[0124] In some embodiments, multiple modifications affect different properties of the RSV F polypeptide. For example, one or more amino acid substitutions can be made to increase glycosylation along with one or more amino acid substitutions to block reduction.

[0125] In some embodiments, modifications to the RSV F polypeptide stabilize the pre-fusion conformation (in some embodiments, multiple modifications can have additive effects on certain properties).

[0126] In some embodiments, the modifications stabilize the site 0 epitope (also known as antigenic site 0) of pre-fusion RSV F, for example, as described in McLellan et al., Science 340(6136):1113-1117 (2013). In some embodiments, the modifications that stabilize the site 0 epitope are interprotomer stabilizing. In some embodiments, the modifications that stabilize the site 0 epitope stabilize pre-fusion F as measured by binding of site 0 and site V, as measured by binding to antibodies D25 or AM14, respectively.

[0127] In some embodiments, the modification increases the expression of RSV F in an expression system. In some embodiments, the modification increases the secretion of RSV F in an expression system. In some embodiments, the modification increases the stability of the recombinant RSV F after expression. This change can be in any type of expression system, such as bacterial, fungal, insect, or mammalian.

[0128] In some embodiments, amino acid substitutions that introduce proline increase expression compared to other constructs. In some embodiments, amino acid substitutions that add glycans increase expression compared to other constructs. In some embodiments, amino acid substitutions that replace K or R with other amino acids increase expression compared to other constructs. The observable increase in expression may be due to any mechanism that increases the yield of a fermentation run or other production process, including relative inhibition of protease cleavage or degradation, and / or increased stability in the host cell or extracellular environment. In some embodiments, amino acid substitutions that replace one or more K residues in the HRB region of RSV F with other amino acids increase expression compared to other constructs.

[0129] In some embodiments, amino acid substitutions that replace K with other amino acids increase the stability of the RSV F polypeptide. In some embodiments, amino acid substitutions that replace one or more K residues in the HRB region of RSV F with other amino acids increase the stability of the RSV F polypeptide. In some embodiments, this increased stability is due to reduced protease cleavage.

[0130] In some embodiments, the RSV F comprises a mutation that removes disulfides, for example, a mutation that prevents conjugation after reduction. In some embodiments, the I217P substitution is Blocks reduction of the F polypeptide In some embodiments, the amino acid substitution that replaces K with another amino acid blocks reduction of the RSV F polypeptide in the presence of a reducing agent.

[0131] In some embodiments, the single chain construct increases expression compared to other constructs.

[0132] In some embodiments, the RSV F polypeptide comprises the DS-CAV1 sequence (SEQ ID NO:25) (Mclellan, JS et al., Science 342(6158):592-598 (2013)). In some embodiments, the RSV F polypeptide comprises a DS-CAV1 sequence that is further modified, for example, at least one, two, or three of the asparagines described above.

[0133] C. RSV G Polypeptide As used herein, the RSV G polypeptide may include the entire sequence of RSV G or a portion of RSV G. The RSV G polypeptide may include modifications compared to the wild-type sequence. In some embodiments, the RSV G polypeptide is a modified RSV G compared to the wild-type RSV G (SEQ ID NO: 27).

[0134] In some embodiments, these modifications are changes to the amino acids of the RSV G polypeptide compared to wild-type RSV G.

[0135] In some embodiments, the RSV G polypeptide comprises all or a portion of the RSV G ectodomain (SEQ ID NO: 28 or a position corresponding thereto). In some embodiments, the RSV G polypeptide comprises all or a portion of the Gcc region (amino acids 151-193 of RSV G (SEQ ID NO: 27)). In some embodiments, the RSV G polypeptide comprises a CX3C motif. In some embodiments, the RSV G polypeptide binds to the CX3CR1 receptor. The Gcc region is conserved and immunogenic, and can therefore be used to elicit antibodies with broad activity against RSV strains. In some embodiments, RSV Gcc strain A is provided as set forth in SEQ ID NO: 32. In some embodiments, RSV Gcc strain B is provided as set forth in SEQ ID NO: 33.

[0136] In some embodiments, the RSV G polypeptide is not glycosylated. For example, the RSV G polypeptide can lack NXS / TX glycosylation sites, either by truncation or mutation of an N or S / T residue (e.g., Q or A, respectively), or a combination thereof.

[0137] In some embodiments, the RSV G polypeptide is part of an antigenic ferritin polypeptide. For example, the RSV G polypeptide can be conjugated to ferritin as described herein via a surface-exposed cysteine ​​on ferritin. In some embodiments, the ferritin nanoparticle is also a fusion protein comprising a RSV F polypeptide, such as any of the polypeptides comprising the RSV F polypeptide and ferritin proteins described above.

[0138] D. Antigenic RSV Polypeptides, Including Ferritin Also provided herein is an antigenic RSV polypeptide comprising a ferritin and a RSV polypeptide. The RSV polypeptide can be an RSV F polypeptide, such as any of the RSV F polypeptides described herein. The RSV F polypeptide can include the entire sequence of RSV F or a portion of RSV F. The RSV F polypeptide can include one or more modifications (e.g., amino acid substitutions) compared to the wild-type sequence. The RSV polypeptide can be an RSV G polypeptide, such as any of the RSV G polypeptides described herein.

[0139] In some embodiments, the ferritin in the polypeptide is wild-type ferritin. In some embodiments, the ferritin is bacterial, insect, fungal, avian, or mammalian. In some embodiments, the ferritin is human. In some embodiments, the ferritin is bacterial.

[0140] In some embodiments, the ferritin is a light chain and / or a heavy chain ferritin. In some embodiments, the ferritin is an insect ferritin, such as Trichoplusia ni heavy chain ferritin (SEQ ID NO: 211) or Trichoplusia ni light chain ferritin. In some embodiments, the ferritin is human ferritin, such as human heavy chain ferritin (SEQ ID NO: 214 or FTH1, gene number 2495) or human light chain ferritin (SEQ ID NO: 215 or FTL, gene number 2512). In some embodiments, the ferritin nanoparticles include 24 total subunits of heavy chain ferritin and light chain ferritin, such as human or urticaria ferritin nanoparticles. Utricaria ferritin nanoparticles can include 12 subunits of heavy chain ferritin and 12 subunits of light chain ferritin.

[0141] In some embodiments, the antigenic RSV polypeptide comprises a light chain ferritin and a RSV polypeptide. In some embodiments, the antigenic RSV polypeptide comprises a heavy chain ferritin and a RSV polypeptide. In some embodiments, an antigenic RSV polypeptide comprising a light chain ferritin and a RSV polypeptide can assemble with a heavy chain ferritin that is not linked to a RSV polypeptide. In some embodiments, an antigenic RSV polypeptide comprising a heavy chain ferritin and a RSV polypeptide can assemble with a light chain ferritin that is not linked to a RSV polypeptide. Ferritin that is not linked to a RSV polypeptide (or more generally, a non-ferritin polypeptide) is referred to as "naked ferritin".

[0142] In some embodiments, the antigenic polypeptide comprising heavy chain ferritin and polypeptide is assembled with the antigenic polypeptide comprising light chain ferritin and RSV polypeptide to allow two identical or different non-ferritin polypeptides to be displayed on a single ferritin nanoparticle.In some embodiments, the two different non-ferritin polypeptides are RSV polypeptides.In some embodiments, the two different non-ferritin polypeptides are encoded by RSV and different infectious agents.In some embodiments, the different non-ferritin polypeptides from different infectious agents are from viruses or bacteria.

[0143] In some embodiments, an antigenic polypeptide comprising a heavy chain ferritin and a non-ferritin polypeptide can be assembled with a polypeptide comprising a light chain ferritin and a non-ferritin polypeptide to form a bivalent composition, wherein one or both of the non-ferritin polypeptides are RSV polypeptides, such as a RSV F or G polypeptide, e.g., a RSV F or G polypeptide described herein.

[0144] In some embodiments, the ferritin is H. pylori ferritin (see SEQ ID NO: 208 or 209 for exemplary H. pylori ferritin sequences), optionally with one or more mutations such as those described herein. In some embodiments, the lower sequence homology between H. pylori ferritin (or other bacterial ferritins) and human ferritin may reduce the likelihood of autoimmunity when used as a vaccine platform (see Kanekiyo et al., Cell 162, pp. 1090-1100 (2015)).

[0145] In some embodiments, the ferritin is Pyrococcus furiosus ferritin (NCBI seq WP_011011871.1) having one or more mutations described herein.

[0146] In some embodiments, the ferritin is greater than 70%, greater than 75%, greater than 80%, greater than 85%, greater than 90%, greater than 95%, greater than 97% identical to wild-type ferritin. It includes sequences with high, greater than 98%, or greater than 99% identity.

[0147] In some embodiments, nanoparticles are provided that include an antigenic RSV polypeptide disclosed herein, including a RSV polypeptide and ferritin.

[0148] In some embodiments, a different protein capable of forming nanoparticles is used instead of ferritin. In some embodiments, the protein is lumazine synthase (see Ra et al., Clin Exp Vaccine Res 3:227-234 (2014)). In some embodiments, the protein is lumazine synthase serotype 1, 2, 3, 4, 5, 6, or 7. Exemplary lumazine synthase sequences are provided in SEQ ID NOs: 216 and 219. In some embodiments, the lumazine synthase comprises a sequence having 80%, 85%, 90%, 95%, 98%, or 99% identity to SEQ ID NOs: 216 or 219.

[0149] 1. Cysteine ​​for conjugation In some embodiments, ferritin is mutated to provide a chemical handle for conjugation of an immunostimulatory moiety and / or a RSV polypeptide. This can be achieved by a mutation that replaces a surface-exposed non-cysteine ​​amino acid with a cysteine. For the avoidance of doubt, a phrase such as "replace a surface-exposed amino acid with a cysteine" necessarily implies that the surface-exposed amino acid in the wild-type or pre-mutated sequence is not a cysteine. Another approach to provide a chemical handle for conjugation of an immunostimulatory moiety or a RSV polypeptide is to include a linker-like amino acid segment at the N- or C-terminus of ferritin, where the amino acid segment includes a cysteine. In some embodiments, this cysteine ​​(replacing a surface-exposed amino acid or in the N- or C-terminal linker) is unpaired, which means that it does not have a suitable partner cysteine ​​to form a disulfide bond. In some embodiments, this cysteine ​​does not change the secondary structure of ferritin. In some embodiments, this cysteine ​​does not change the tertiary structure of ferritin.

[0150] In some embodiments, this cysteine ​​can be used to conjugate an agent such as an immunostimulatory moiety to ferritin. In some embodiments, this cysteine ​​provides a reactive free thiol group. In some embodiments, the agent conjugated to this cysteine ​​on ferritin is exposed on the surface of assembled ferritin particles. In some embodiments, this cysteine ​​can interact with molecules and cells of interest during the assembly of ferritin particles after administration.

[0151] In some embodiments, the presence of this cysteine ​​allows for conjugation of one or more immunostimulatory moieties, such as adjuvants, hi some embodiments, conjugation of an immunostimulatory moiety does not occur in the absence of this cysteine.

[0152] In some embodiments, the non-cysteine ​​amino acid replaced with cysteine ​​is selected from E12, S72, A75, K79, S100, and S111 of H. pylori ferritin. Thus, in some embodiments, the surface-exposed amino acid replaced with cysteine ​​is an amino acid residue corresponding to E12, S26, S72, A75, K79, S100, or S111 of H. pylori ferritin. Similar amino acids can be found in non-H. pylori ferritin by pairwise or structural alignment. In some embodiments, the non-cysteine ​​amino acid replaced with cysteine ​​can be selected from amino acids corresponding to S3, S19, S33, I82, A86, A102, and A120 of human light chain ferritin. In some embodiments, the non-cysteine ​​amino acid replaced with cysteine ​​is selected from amino acids corresponding to S3, S19, S33, I82, A86, A102, and A120 of human light chain ferritin. The surface-exposed amino acids to be selected are selected with the understanding that when the native amino acid is replaced with a cysteine, it will be reactive in the assembled ferritin multimer or particle, and / or the cysteine ​​will not interfere with the stability of the ferritin multimer or particle, and / or the cysteine ​​will not result in a reduction in the expression level of ferritin.

[0153] In some embodiments, the ferritin comprises an E12C mutation. In some embodiments, the E12C residue can be used to conjugate an agent (e.g., an immunostimulatory moiety and / or a RSV polypeptide) to ferritin. In some embodiments, the E12C residue provides a reactive free thiol group. In some embodiments, the agent conjugated to the E12C residue on the ferritin monomer is expressed on the surface of the assembled ferritin multimer or particle. In some embodiments, 24 E12C residues (one from each monomer) are present on the surface of the ferritin multimer or particle.

[0154] In some embodiments, ferritin comprises an S26C mutation. In some embodiments, the S26C residue can be used to conjugate an agent (e.g., an immunostimulatory moiety and / or a RSV polypeptide) to ferritin. In some embodiments, the S26C residue provides a reactive free thiol group. In some embodiments, the agent conjugated to the S26C residue on the ferritin monomer is expressed on the surface of the assembled ferritin multimer or particle. In some embodiments, 24 S26C residues (one from each monomer) are present on the surface of the ferritin multimer or particle.

[0155] In some embodiments, ferritin comprises an S72C mutation. In some embodiments, the S72C residue can be used to conjugate an agent (e.g., an immunostimulatory moiety and / or a RSV polypeptide) to ferritin. In some embodiments, the S72C residue provides a reactive free thiol group. In some embodiments, the agent conjugated to the S72C residue on the ferritin monomer is expressed on the surface of the assembled ferritin multimer or particle. In some embodiments, 24 S72C residues (one from each monomer) are present on the surface of the ferritin multimer or particle.

[0156] In some embodiments, the ferritin comprises an A75C mutation. In some embodiments, the A75C residue can be used to conjugate an agent (e.g., an immunostimulatory moiety and / or a RSV polypeptide) to ferritin. In some embodiments, the A75C residue provides a reactive free thiol group. In some embodiments, the agent conjugated to the A75C residue on the ferritin monomer is expressed on the surface of the assembled ferritin multimer or particle. In some embodiments, 24 A75C residues (one from each monomer) are present on the surface of the ferritin multimer or particle.

[0157] In some embodiments, the ferritin comprises a K79C mutation. In some embodiments, the K79C residue can be used to conjugate an agent (e.g., an immunostimulatory moiety and / or a RSV polypeptide) to ferritin. In some embodiments, the K79C residue provides a reactive free thiol group. In some embodiments, the agent conjugated to the K79C residue on the ferritin monomer is expressed on the surface of the assembled ferritin multimer or particle. In some embodiments, 24 K79C residues (one from each monomer) are present on the surface of the ferritin multimer or particle.

[0158] In some embodiments, ferritin comprises an S100C mutation. In some embodiments, the S100C residue can be used to conjugate an agent (e.g., an immunostimulatory moiety and / or a RSV polypeptide) to ferritin. In some embodiments, the S100C residue provides a reactive free thiol group. In some embodiments, ferritin Agents conjugated to S100C residues on ferritin monomers are expressed on the surface of assembled ferritin multimers or particles. In some embodiments, 24 S100C residues (one from each monomer) are present on the surface of the ferritin multimer or particle.

[0159] In some embodiments, ferritin comprises an S111C mutation. In some embodiments, the S111C residue can be used to conjugate an agent (e.g., an immunostimulatory moiety and / or a RSV polypeptide) to ferritin. In some embodiments, the S111C residue provides a reactive free thiol group. In some embodiments, the agent conjugated to the S111C residue on the ferritin monomer is expressed on the surface of the assembled ferritin multimer or particle. In some embodiments, 24 S111C residues (one from each monomer) are present on the surface of the ferritin multimer or particle.

[0160] 2. Removal of Internal Cysteines In some embodiments, the ferritin comprises a mutation that replaces an internal cysteine ​​with a non-cysteine ​​amino acid. By removing the original internal cysteine ​​residue, it is possible to ensure that there is only one unpaired cysteine ​​per ferritin monomer, avoiding undesirable reactions such as disulfide formation, which may result in a more stable and efficient outcome (e.g., adjuvant presentation). In some embodiments, C31 of H. pyrolori ferritin is replaced with a non-cysteine ​​amino acid. In some embodiments, C31 of H. pyrolori ferritin is replaced with serine (C31S), although any non-cysteine ​​residue, such as alanine, glycine, threonine, or asparagine, may be used. Similar amino acids can be found in non-H. pyrolori ferritin by pairwise or structural alignment. Thus, in some embodiments, the internal cysteine ​​that is replaced for a non-cysteine ​​is an amino acid residue that aligns with C31 of H. pyrolori ferritin. Exemplary ferritin sequences exhibiting the C31S mutation are set forth in SEQ ID NOs: 201-207. In some embodiments, when more than one internal cysteine ​​is present in ferritin, two or more (e.g., each) internal cysteine ​​is replaced with a non-cysteine ​​amino acid, such as serine or an amino acid selected from serine, alanine, glycine, threonine, or asparagine.

[0161] 3. Glycosylation Human-compatible glycosylation may play a role in safety and efficacy in recombinant drug products. Regulatory approval may be contingent on demonstrating proper glycosylation as a critical quality attribute (see Zhang et al., Drug Discovery Today 21(5):740-765 (2016)). N-glycans may result from glycosylation of asparagine side chains and may vary in structure between humans and other organisms such as bacteria and yeast. Thus, it would be desirable to reduce or eliminate non-human glycosylation and / or N-glycan formation in ferritin according to the present disclosure. In some embodiments, controlling glycosylation of ferritin improves the efficacy and / or safety of the composition, especially when used for human vaccination.

[0162] In some embodiments, ferritin is mutated to inhibit the formation of N-glycans. In some embodiments, the mutated ferritin has reduced glycosylation compared to its corresponding wild-type ferritin.

[0163] In some embodiments, the ferritin comprises a mutation that replaces a surface-exposed asparagine with a non-asparagine amino acid. In some embodiments, the surface-exposed asparagine is N19 of H. pylori ferritin, or a position corresponding to position 31 of H. pylori ferritin as determined by pairwise or structural alignment. In some embodiments, mutating such an asparagine, e.g., N19 of H. pylori ferritin, is a ferritin that is capable of converting the surface-exposed asparagine to a non-asparagine amino acid. In some embodiments, the mutation replaces asparagine with glutamine. In some embodiments, the ferritin is H. pylori ferritin containing the N19Q mutation. SEQ ID NOs: 201-207 are exemplary ferritin sequences containing the N19Q mutation.

[0164] Mammals exposed to glycosylated proteins produced in bacteria or yeast may develop an immune response against the glycosylated protein because the glycosylation pattern of a given protein in bacteria or yeast may differ from the glycosylation pattern of the same protein in a mammal. Thus, some glycosylated therapeutic proteins may not be suitable for production in bacteria or yeast.

[0165] In some embodiments, the reduced glycosylation of ferritin by amino acid mutation promotes the production of the protein in bacteria or yeast. In some embodiments, the reduced glycosylation of ferritin reduces the possibility of side effects in mammals when the mutant ferritin expressed in bacteria or yeast is administered. In some embodiments, the reactogenicity of the mutant ferritin produced in bacteria or yeast in human subjects is low due to the reduced glycosylation. In some embodiments, the incidence of hypersensitivity reactions in human subjects is low after treatment with mutant ferritin with reduced glycosylation compared to wild type ferritin.

[0166] In some embodiments, the composition comprising mutant ferritin with reduced glycosylation is degraded in a subject slower than that of a composition comprising wild-type ferritin or that of a corresponding ferritin with wild-type glycosylation.In some embodiments, the composition comprising mutant ferritin with reduced glycosylation has reduced clearance in a subject compared to that of a composition comprising wild-type ferritin or that of a corresponding ferritin with wild-type glycosylation.In some embodiments, the composition comprising mutant ferritin with reduced glycosylation has a longer serum half-life compared to that of a composition comprising wild-type ferritin or that of a corresponding ferritin with wild-type glycosylation.

[0167] 4. Combination of mutations In some embodiments, ferritin comprises more than one type of mutation described herein.In some embodiments, ferritin comprises one or more mutations independently selected from a mutation that reduces glycosylation, a mutation that removes internal cysteines, and a mutation that creates surface-exposed cysteines.In some embodiments, ferritin comprises a mutation that reduces glycosylation, a mutation that removes internal cysteines, and a mutation that creates surface-exposed cysteines.

[0168] In some embodiments, the ferritin comprises an N19Q mutation, a C31S mutation, and a mutation that creates a surface-exposed cysteine. In some embodiments, the ferritin comprises an N19Q mutation, a C31S mutation, and an E12C mutation. In some embodiments, the ferritin comprises an N19Q mutation, a C31S mutation, and an S72C mutation. In some embodiments, the ferritin comprises an N19Q mutation, a C31S mutation, and an A75C mutation. In some embodiments, the ferritin comprises an N19Q mutation, a C31S mutation, and a K79C mutation. In some embodiments, the ferritin comprises an N19Q mutation, a C31S mutation, and an S100C mutation. In some embodiments, the ferritin comprises an N19Q mutation, a C31S mutation, and an S111C mutation. In some embodiments, the ferritin contains mutations corresponding to any of the aforementioned sets of mutations, which change N to Q, C to S, and non-cysteine ​​surface-exposed amino acids to cysteines at positions determined by pairwise alignment of the ferritin amino acid sequence with the H. pylori ferritin amino acid sequence (SEQ ID NO: 208 or 209).

[0169] Exemplary ferritins containing more than one type of mutation are provided in SEQ ID NOs:201-207.

[0170] 5. Structural Alignment As discussed herein, the positions of the mutations corresponding to those described for a given polypeptide (e.g., H. pylori ferritin) can be identified by pairwise or structural alignment. Structural alignment is appropriate for large protein families such as ferritin, where proteins share similar structures despite significant sequence variation and many members of the family have been structurally characterized, and can also be used to identify corresponding positions in different forms of other polypeptides described herein, such as RSV polypeptides (e.g., RSV F or G). The Protein Data Bank (PDB) contains 3D structures for many ferritins, including the ferritins listed below with their accession numbers.

[0171] 2jd6,2jd7-PfFR-Pyrococcus furiosus. 2jd8-PfFR+Zn. 3a68-soFR from gene SferH4-soybean. 3a9q-soFR from gene SferH4(mutant). 3egm,3bvf,3bvi,3bvk,3bvl-HpFR-Helicobacter pylori. 5c6f-HpFR(mutant)+Fe. 1z4a,1vlg-FR-Thermotoga maritime. 1s3q,1sq3,3kx9-FR-Archaeoglubus fulgidus, 1krq-FR-Campylobacter jejuni. 1eum-EcFR-Escherichia coli. 4reu-EcFR+Fe. 4xgs-EcFR(mutant)+Fe2O2. 4ztt-EcFR(mutant)+Fe2O+Fe2+Fe+O2. 1qgh-LiFR-Listeria innocua. 3qz3-VcFR-Vibrio cholerae. 3vnx-FR-Ulva pertusa. 4ism,4isp,4itt,4itw,4iwj,4iwk,4ixk,3e6s-PnmFR-Pseudo-nitschia multiseries. 4zkh,4zkw,4zkx,4zl5,4zl6,4zlw,4zmc-PnmFR(mutant)+Fe. 1z6o-FR-Cyprinus tepidum. 4cmy-FR+Fe-Chlorobaculum tepidum. Ferritin light chain (FTL). 1lb3,1h96-mFTL-mouse. 1rcc,1rcd,1rci-bFTL+tartrate+Mg. 1rce,1rcg-bFTL+tartrate+Mn. 3noz,3np0,3np2,3o7r-hoFTL(mutant)-horse. 3o7s,3u90-hoFTL. 4v1w-hoFTL-cryo EM. 3rav,3rd0-hoFTL+barbiturate. Ferritin light chain + heavy chain: 5gn8-hFTH+Ca.

[0172] Structural alignment involves identifying corresponding residues across two (or more) polypeptide sequences by (i) modeling the structure of a first sequence using the known structure of a second sequence, or (ii) comparing the structures of a first and second sequence, both of which are known, and identifying the residue in the first sequence that is most similarly located to the residue of interest in the second sequence. Corresponding residues are identified in some algorithms based on minimizing the distance of alpha carbons in the superimposed structures (e.g., which set of alpha carbon pairs provides the least mean square deviation for the alignment). When identifying positions in a non-H. pylori ferritin that correspond to positions described for H. pylori ferritin, the H. pylori ferritin can be a "second" sequence. When a non-H. pylori ferritin of interest does not have a known structure available, but is more closely related to another non-H. pylori ferritin with a known structure than H. pylori ferritin, the closely related non-H. pylori ferritin can be identified. It may be most effective to use the known structure of ferritin to model the non-H. pyrolori ferritin of interest, and then compare the model with the H. pyrolori ferritin structure to identify the desired corresponding residue in the ferritin of interest.There is a wide range of literature on structure modeling and alignment, and representative disclosures include U.S. Patent No. 6,859,736; U.S. Patent No. 8,738,343; and the disclosures cited in Aslam et al., Electronic Journal of Biotechnology 20 (2016) 9-13.For a discussion of modeling structures based on known related structures or structures, see, for example, Bordoli et al., Nature Protocols 4 (2009) 1-13, and the references cited therein.

[0173] 6. Immunostimulatory moieties; adjuvants; conjugated RSV polypeptides In some embodiments, the immunostimulatory moiety, such as a RSV polypeptide and / or adjuvant, is linked to a surface-exposed amino acid. In some embodiments, the surface-exposed amino acid is a cysteine, for example due to the mutations discussed above. In some embodiments, the surface-exposed amino acid is a lysine, an aspartate, or a glutamate. Conjugation procedures using glutaraldehyde (for conjugating lysine to an amino-bearing linker or moiety) or a carbodiimide (e.g., 1-cyclohexyl-3-(2-morpholin-4-yl-ethyl)carbodiimide, or 1-ethyl-3-(3-dimethyl-aminopropyl)carbodiimide (EDC; EDAC) for conjugating aspartate or glutamate to an amino-bearing linker or moiety, or for conjugating lysine to a carboxyl-bearing linker or moiety) can be found in Chapter 4 of Holtzhauer, M., Basic Methods for the Molecular Biology of the 1990s, available at, for example, www.springer.com. Biochemical Lab, Springer 2006, ISBN 978-3-540-32785-1.

[0174] In some embodiments, an immunostimulatory moiety, such as an adjuvant, is attached to an amino acid exposed on the surface of ferritin. In some embodiments, more than one immunostimulatory moiety, such as an adjuvant, is attached to an amino acid exposed on the surface of ferritin. In some embodiments, 24 immunostimulatory moieties are attached to a ferritin multimer or particle (e.g., one moiety of each monomer in an H. pylori ferritin particle). In some embodiments where multiple immunostimulatory moieties are attached to a ferritin nanoparticle, the immunostimulatory moieties are all identical. In some embodiments where multiple immunostimulatory moieties are attached to a ferritin nanoparticle, the immunostimulatory moieties are not all identical.

[0175] a) Type of Immunostimulatory Moiety; Adjuvant Immunostimulatory moieties capable of binding to surface-exposed amino acids (e.g., cysteine) can be used in ferritin in accordance with the present disclosure. In some embodiments, the immunostimulatory moiety is a B cell agonist.

[0176] In some embodiments, the immunostimulatory moiety is not hydrophobic. In some embodiments, the immunostimulatory moiety is hydrophilic. In some embodiments, the immunostimulatory moiety is polar. In some embodiments, the immunostimulatory moiety is capable of hydrogen bonding or ionic bonding, including, for example, a hydrogen bond donor, a hydrogen bond acceptor, a cationic moiety, or an anionic moiety. A moiety is considered to be cationic or anionic if it is ionized in aqueous solution at a physiologically relevant pH, such as pH 6, 7, 7.4, or 8.

[0177] In some embodiments, the immunostimulatory moiety is an adjuvant. In some embodiments, the adjuvant comprises a pathogen-associated molecular pattern (PAMP). In some embodiments, the adjuvant comprises a toll-like receptor (TLR) agonist or an interferon. In some embodiments, the adjuvant is a stimulator of genes (STING) agonist. In some embodiments, the adjuvant activates TLR signaling in B and / or T cells. In some embodiments, the adjuvant modulates adaptive immune responses.

[0178] (1) TLR2 agonists In some embodiments, the immunostimulatory moiety is a TLR2 agonist. In some embodiments, the immunostimulatory moiety stimulates TLR2 signaling. In some embodiments, the immunostimulatory moiety is a synthetic small molecule ligand of TLR2. In some embodiments, the immunostimulatory moiety is a synthetic small molecule agonist of TLR2 signaling.

[0179] In some embodiments, the TLR2 agonist is PAM2CSK4, FSL-1, or PAM3CSK4.

[0180] (2) TLR7 / 8 agonists In some embodiments, the immunostimulatory moiety is a TLR7 and / or TLR8 agonist (i.e., an agonist of at least one of TLR7 and TLR8). In some embodiments, the immunostimulatory moiety stimulates TLR7 and / or TLR8 signaling. In some embodiments, the immunostimulatory moiety is a synthetic small molecule ligand of TLR7 and / or TLR8. In some embodiments, the immunostimulatory moiety is a synthetic small molecule agonist of TLR7 and / or TLR8 signaling.

[0181] In some embodiments, the TLR7 and / or TLR8 agonist is a single stranded (ssRNA). In some embodiments, the TLR7 and / or TLR8 agonist is an imidazoquinoline. In some embodiments, the TLR7 and / or TLR8 agonist is a nucleoside analog.

[0182] In some embodiments, the TLR7 and / or TLR8 agonist is an imidazoquinoline amine Toll-like receptor (TLR) agonist, such as 3M-012 (3M Pharmaceuticals). The structure of free 3M-012 is: [ka] It is understood that an immunostimulatory moiety such as 3M-012 or any moiety discussed herein can be conjugated to ferritin by replacing the appropriate terminal atom (e.g., hydrogen) of the moiety, for example, with a bond to ferritin as described herein at the sulfur of a surface-exposed cysteine, or by a linker that binds to such sulfur. Thus, when conjugated to ferritin, the structure of the immunostimulatory moiety differs slightly from that of the free molecule.

[0183] In some embodiments, the TLR7 and / or TLR8 agonist is SM7 / 8a. The structure of free SM7 / 8a is: [ka] It is.

[0184] See, e.g., Nat Biotechnol. 2015 Nov;33(11):1201-10. doi:10.1038 / nbt.3371.

[0185] (3)TLR9 agonist In some embodiments, the immunostimulatory moiety is a TLR9 agonist. In some embodiments, the immunostimulatory moiety stimulates TLR9 signaling. In some embodiments, the immunostimulatory moiety is a synthetic small molecule ligand of TLR9. In some embodiments, the immunostimulatory moiety is a synthetic small molecule agonist of TLR9 signaling.

[0186] In some embodiments, TLR9 agonist is CpG oligodeoxynucleotide (ODN).In some embodiments, TLR9 agonist is unmethylated CpG ODN.In some embodiments, CpG ODN contains partial or complete phosphorothioate (PS) backbone instead of natural phosphodiester (PO) backbone found in normal DNA.

[0187] In some embodiments, the CpG ODN is a class B ODN, which contains one or more hexamer CpG motifs including 5' purine (Pu)-pyrimidine (Py)-CG-Py-Pu3'; has a fully phosphorothioated (i.e., PS-modified) backbone; and has a length of 18-28 nucleotides. In some embodiments, the CpG ODN comprises the sequence of SEQ ID NO: 210, and optionally includes phosphorothioate linkages in the backbone.

[0188] In some embodiments, the TLR9 agonist comprises an immunostimulatory sequence (ISS). In some embodiments, the TLR9 agonist is ISS-1018 (Dynavax) (SEQ ID NO: 210).

[0189] (4) STING agonists In some embodiments, the immunostimulatory moiety is a STING (stimulator of interferon genes protein, also called endoplasmic reticulum IFN stimulator) agonist. In some embodiments, the immunostimulatory moiety stimulates STING signaling. In some embodiments, the immunostimulatory moiety is a synthetic small molecule ligand of STING. In some embodiments, the immunostimulatory moiety is a synthetic small molecule agonist of STING signaling.

[0190] In some embodiments, the STING agonist is a cyclic dinucleotide (CDN). See, e.g., Danilchanka et al., Cell 154:962-970 (2013). Exemplary CDNs include cdA, cdG, cAMP-cGMP, and 2'-5',3'-5' cGAMP (for structure, see Danilchanka et al., Cell 154:962-970 (2013)). (See, e.g., J. Med. Soc. 2003, 113:1311-1325). STING agonists also include synthetic agonists such as DMXAA. [ka]

[0191] b) Conjugated RSV Polypeptides In some embodiments, the RSV polypeptide is conjugated to an amino acid exposed on the surface of ferritin. In some embodiments, the RSV polypeptide makes the ferritin protein antigenic. In some embodiments, the RSV polypeptide is antigenic alone, while in some embodiments, the RSV polypeptide is antigenic due to its association with ferritin. In some embodiments, the RSV polypeptide is any one of the RSV F or G polypeptides described herein.

[0192] c) Conjugation In some embodiments, a surface-exposed cysteine ​​(e.g., due to a mutation described herein) or a cysteine ​​in a peptide linker bound to ferritin (e.g., the N-terminus of ferritin) is used to conjugate an immunostimulatory moiety, such as an adjuvant, or a RSV polypeptide to ferritin. In some embodiments, a linker is conjugated to such a cysteine, which can then be conjugated to an immunostimulatory moiety, such as an adjuvant, or a RSV polypeptide. In some embodiments, such a cysteine ​​creates a chemical handle for a conjugation reaction that binds an adjuvant, a linker, or a RSV polypeptide. In some embodiments, a bioconjugate is produced, and an immunostimulatory moiety, such as an adjuvant, or a RSV polypeptide is linked to ferritin after reduction of such a cysteine. In some embodiments, the cysteine ​​is an unpaired surface-exposed cysteine, i.e., a cysteine ​​that lacks a partner cysteine ​​in the appropriate position to form a disulfide bond. In some embodiments, the cysteine ​​is an unpaired cysteine ​​that includes a free thiol side chain.

[0193] (1) Types of conjugation chemistry Any type of chemistry can be used to conjugate an immunostimulatory moiety, such as an adjuvant, or a RSV polypeptide to ferritin, for example, via reaction of a surface-exposed amino acid, such as cysteine ​​or another amino acid, such as Lys, Glu, or Asp.

[0194] In some embodiments, the conjugation is carried out using click chemistry. As used herein, "click chemistry" refers to a reaction between a pair of functional groups that react (i.e., "click") with each other rapidly and selectively. In some embodiments, click chemistry can be carried out under mild aqueous conditions. In some embodiments, the click chemistry reaction utilizes cysteines on the surface of ferritin, such as cysteines resulting from mutations of surface-exposed amino acids, to react with cysteines. Click chemistry is carried out using functional groups that can

[0195] A variety of reactions that meet the criteria of click chemistry are known in the art, and one of skill in the art can use any of several published methodologies (see, for example, Hein et al., Pharm Res 25(10):2216-2230 (2008)). A wide range of commercially available reagents can be used for click chemistry, such as reagents from Sigma Aldrich, Jena Bioscience, or Lumiprobe. In some embodiments, conjugation is performed using click chemistry, as described in the examples below.

[0196] In some embodiments, click chemistry occurs after reduction of ferritin.

[0197] In some embodiments, the click chemistry can be a one-step click reaction. In some embodiments, the click chemistry can be a two-step click reaction.

[0198] In some embodiments, the reaction comprises metal-free click chemistry, hi some embodiments, the reaction comprises thiol-maleimide and / or disulfide exchange.

[0199] Metal-Free Click Chemistry Metal-free click chemistry can be used for conjugation reactions to avoid possible oxidation of proteins. Metal-free click chemistry has been used to form antibody conjugates (see van Geel et al., Bioconjugate Chem. 2015, 26, pp. 2233-2242).

[0200] In some embodiments, metal-free click chemistry is used in the reaction of binding the adjuvant to ferritin. In some embodiments, copper-free conjugation is used in the reaction of binding the adjuvant to ferritin. In some embodiments, metal-free click chemistry uses bicyclo[6.1.0]nonyne (BCN). In some embodiments, metal-free click chemistry uses dibenzoazacyclooctyne (DBCO). In some embodiments, BCN or DBCO reacts with an azide group.

[0201] DBCO has high specificity for azide groups via a strain-promoted click reaction in the absence of a catalyst, leading to high yields of stable triazoles. In some embodiments, DBCO reacts with azides in the absence of a copper catalyst.

[0202] In some embodiments, metal-free click chemistry is used in a one-step click reaction. In some embodiments, metal-free click chemistry is used in a two-step click reaction.

[0203] Thiol-maleimide and disulfide exchange Ferritin as used herein can include cysteines that contain thiols, also known as sulfhydryls, that are available (or can be made available through reduction) for reaction with sulfhydryl-reactive chemical groups. Thus, cysteines allow for chemoselective modification to add immunostimulatory moieties, such as adjuvants, to ferritin. Under basic conditions, cysteines are deprotonated to generate thiolate nucleophiles, which can react with weak electrophiles, such as maleimides and iodoacetamides. Reaction of cysteines with maleimides or iodoacetamides results in carbon-sulfur bonds.

[0204] In some embodiments, the sulfhydryl-reactive chemical group reacts with a surface-exposed cysteine ​​or a cysteine ​​in the linker of ferritin. In some embodiments, the sulfhydryl-reactive chemical group is a haloacetyl, maleimide, aziridine, acryloyl, arylating agent, vinylsulfone, pyridyl disulfide, or TNB-thiol.

[0205] In some embodiments, the sulfhydryl-reactive chemical group is conjugated to the sulfhydryl of a cysteine ​​by alkylation (i.e., formation of a thioether bond). In some embodiments, the sulfhydryl-reactive chemical group is conjugated to the sulfhydryl of a cysteine ​​by disulfide exchange (i.e., formation of a disulfide bond).

[0206] In some embodiments, the reaction to conjugate an immunostimulatory moiety, such as an adjuvant, to ferritin is a thiol-maleimide reaction.

[0207] In some embodiments, the sulfhydryl-reactive chemical group is a maleimide. In some embodiments, the reaction of maleimide with cysteine ​​results in the formation of a stable thioester bond that is, for example, not reversible. In some embodiments, the maleimide does not react with tyrosine, histidine, or methionine in ferritin. In some embodiments, the unreacted maleimide is quenched at the end of the reaction, for example, by adding an excess of free thiol.

[0208] In some embodiments, the reaction of conjugating an immunostimulatory moiety, such as an adjuvant, to ferritin is thiol-disulfide exchange, also known as disulfide interchange. In some embodiments, the reaction involves the formation of a mixed disulfide that includes a portion of the original disulfide. In some embodiments, the original disulfide is a cysteine ​​that is introduced into ferritin by mutation of a surface-exposed amino acid or by adding an N-terminal linker.

[0209] In some embodiments, the sulfhydryl-reactive chemical group is a pyridyldithiol. In some embodiments, the sulfhydryl-reactive chemical group is a TNB-thiol group.

[0210] (2) Conjugated Linker In some embodiments, an immunostimulatory moiety, such as an adjuvant, or an RSV polypeptide is linked to ferritin via a linker covalently attached to a surface-exposed amino acid, such as cysteine. In some embodiments, the linker comprises a polyethylene glycol, e.g., a PEG linker. In some embodiments, the polyethylene glycol (e.g., PEG) linker increases the water solubility and ligation efficiency of ferritin linked to an immunostimulatory moiety, such as an adjuvant. The PEG linker is between 2 and 18 PEG lengths, e.g., PEG4, PEG5, PEG6, PEG7, PEG8, PEG9, PEG10, PEG11, PEG12, PEG13, PEG14, PEG15, PEG16, PEG17, and PEG18.

[0211] In some embodiments, the linker comprises a maleimide. In some embodiments, the linker comprises an immunostimulatory moiety (ISM)-linker-maleimide component. In some embodiments, the ISM-linker-maleimide is conjugated to ferritin in one-step click chemistry by reaction of the maleimide with a cysteine ​​of ferritin. In some embodiments, the ISM of the adjuvant-linker-maleimide is SM7 / 8a. In some embodiments, the linker of the ISM-linker-maleimide is PEG4. In some embodiments, the ISM-linker-maleimide is SM7 / 8a-PEG4-maleimide.

[0212] In some embodiments, a two-step click chemistry protocol is used with a linker that comprises a sulfhydryl-reactive chemical group at one end and an amine-reactive group at the other end.In such a two-step click chemistry protocol, the sulfhydryl-reactive chemical group reacts with the cysteine ​​of ferritin, while the amine-reactive group reacts with the reagent that is bound to ISM.In this way, ISM is conjugated to ferritin via a set of two click chemistry reagents.

[0213] In some embodiments of the two-step click chemistry protocol, the sulfhydryl-reactive chemical group is a maleimide, which reacts with a cysteine ​​that has been introduced into ferritin by mutation of a surface-exposed amino acid or by addition of an N-terminal linker.

[0214] In some embodiments of the two-step click chemistry protocol, the amine reactive group is DBCO. In some embodiments of the two-step click chemistry protocol, DBCO reacts with an azide group attached to an ISM.

[0215] In some embodiments, maleimide-linker-DBCO is used. In some embodiments, maleimide-linker-DBCO is conjugated to ferritin after reduction of ferritin. In some embodiments, maleimide-linker-reagent is conjugated to ferritin by reaction of maleimide with cysteine ​​of ferritin in the first step. In some embodiments, DBCO is used to link to ISM that is linked to azide. In some embodiments, ISM that is linked to azide is ISS-1018. In some embodiments, adjuvant that is coupled to azide is 3M-012 or CpG.

[0216] In some embodiments, a linker having a reactive group is attached to the ISM, hi some embodiments, the linker is a PEG4-azide linker or a PEG4-maleimide linker.

[0217] In some embodiments, the PEG4-azide linker is conjugated to 3M-012. An exemplary structure of 3M-012 conjugated to a PEG4-azide linker is: [ka] It is.

[0218] In some embodiments, the PEG4-azide linker is conjugated to SM7 / 8a. An exemplary structure of SM7 / 8a conjugated to a PEG4-azide linker is: [ka] It is.

[0219] In some embodiments, the PEG4-maleimide linker is conjugated to SM7 / 8a. An exemplary structure of SM7 / 8a conjugated to a PEG4-maleimide linker is: [ka] It is.

[0220] In some embodiments, the azide group is conjugated to ISS-1018. An exemplary structure of ISS-1018 conjugated to an NHS ester-azide linker is: [ka] It is.

[0221] E. Linker In some embodiments, the linker separates the amino acid sequence of the RSV polypeptide from the amino acid sequence of ferritin. Any linker may be used. In some embodiments, the linker is a peptide linker that can facilitate expression of the antigenic ferritin polypeptide as a fusion protein (e.g., from a single open reading frame). In some embodiments, the linker is a glycine-serine linker. In some embodiments, the glycine-serine linker is GS, GGGS (SEQ ID NO: 226), 2XGGGS (SEQ ID NO: 227) (i.e., GGGSGGGS (SEQ ID NO: 227)), or 5XGGGS (SEQ ID NO: 228). The linker is N- or C-terminal to ferritin.

[0222] In some embodiments, the linker is 2, 3, 4, 5, 6, 7, 8, 9, or 10 amino acids long. In some embodiments, the linker is about 2-4, 2-6, 2-8, 2-10, 2-12, or 2-14 amino acids long. In some embodiments, the linker is at least 15 amino acids long. In some embodiments, the linker is at least 25 amino acids long. In some embodiments, the linker is at least 30 amino acids long. In some embodiments, the linker is at least 35 amino acids long. In some embodiments, the linker is at least 40 amino acids long. In some embodiments, the linker is less than or equal to 60 amino acids long. In some embodiments, the linker is less than or equal to 50 amino acids long. In some embodiments, the linker is about 16, 28, 40, 46, or 47 amino acids long. In some embodiments, the linker is flexible. In some embodiments, the linker comprises a cysteine, e.g., for use as a conjugation site for an immunostimulatory moiety (e.g., an adjuvant); an exemplary linker comprising a cysteine ​​is provided as SEQ ID NO: 225. In some embodiments, the linker comprises a sequence having at least 75%, 80%, 85%, 90%, or 95% identity to SEQ ID NO: 225, and further comprises a cysteine ​​corresponding to the cysteine ​​in SEQ ID NO: 225. In some embodiments, the linker comprises at least 25 amino acids (e.g., 25-60 amino acids), with the cysteine ​​located at a position ranging from the 8th amino acid from the N-terminus to the 8th amino acid from the C-terminus, or within 10 amino acids of the central residue, or at the attachment position of the linker.

[0223] In some embodiments, the linker comprises glycine (G) and / or serine (S) amino acids. In some embodiments, the linker comprises or consists of glycine (G), serine (S), asparagine (N), and / or alanine (A) amino acids, and optionally cysteine ​​as discussed above. In some embodiments, the linker comprises an amino acid sequence having at least 80%, 85%, 90%, 95%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 222. In some embodiments, the linker comprises GGGSGGGGSGGGGSG (SEQ ID NO: 220), GGSGSGSNSSASSGASSGGASGGSGGSG (SEQ ID NO: 221), GGSGSASSGASASGSSNGSGSGSGSNSSASSGASSGGASGGSGGSG (SEQ ID NO: 222), or GS. In some embodiments, the linker comprises FR1 (SEQ ID NO: 223) or FR2 (SEQ ID NO: 224).

[0224] In some embodiments, the ferritin comprises H. pylori ferritin with an amino-terminal extension of bullfrog ferritin (referred to as hybrid ferritin). In some embodiments, this hybrid ferritin forms multimers with RSV polypeptide binding sites evenly distributed on the surface (see Kanekiyo 2015). In some embodiments, an N-terminal fusion protein with the hybrid ferritin allows for the display of RSV polypeptides on the ferritin nanoparticle surface. In some embodiments, the ferritin is , containing a glutamate at a position corresponding to position 13 of SEQ ID NO:208 (a hybrid ferritin containing this glutamate) or position 6 of SEQ ID NO:209 (wild type H. pylori ferritin in which position 6 is an isoleucine). When combined with the bullfrog linker, this glutamate is believed to maintain the conserved salt bridge found in human and bullfrog ferritins (6R and 14E in both the human light chain and the bullfrog lower subunit ferritin). See Kanekiyo et al., Cell 162, pp. 1090-1100 (2015).

[0225] In some embodiments, the RSV polypeptide is linked to ferritin via a cysteine-thrombin-histidine linker. In some embodiments, this linker is used to directly conjugate a moiety (e.g., an immunostimulatory moiety or an RSV polypeptide) to ferritin via click chemistry. An exemplary sequence that includes a cysteine-thrombin-histidine linker is SEQ ID NO: 218. Click chemistry suitable for conjugation reactions involving cysteine-thrombin-histidine linkers is discussed above.

[0226] In some embodiments, linkers that contain cysteines as conjugation sites for immunostimulatory moieties, such as adjuvants, are used in constructs that contain ferritin molecules that lack an unpaired surface-exposed cysteine ​​or that contain a unpaired surface-exposed cysteine.

[0227] In some embodiments, the construct does not include a linker. In some embodiments, the construct includes one linker. In some embodiments, the construct includes two or more linkers.

[0228] F. Compositions; Uses and Methods for Vaccination In some embodiments, the present invention provides a method for immunizing a subject against infection by RSV.The present invention further provides a method for inducing an immune response against RSV in a subject.In some embodiments, the method comprises administering to a subject an effective amount of a pharmaceutical composition as described herein.In some embodiments, the method comprises administering to a subject an effective amount of an antigenic RSV polypeptide, antigenic ferritin polypeptide, or nanoparticle as described herein.

[0229] In some embodiments, a composition is provided that includes any one or more of the polypeptides, nanoparticles, or fusion proteins described herein and a pharma- ceutically acceptable vehicle, adjuvant, or excipient.

[0230] In some embodiments, the polypeptides, nanoparticles, or compositions described herein are administered to a subject, such as a human, to immunize against infection caused by RSV. In some embodiments, the polypeptides or fusion proteins described herein are administered to a subject, such as a human, to generate a protective immune response against future infection by RSV. In some embodiments, any one or more of the polypeptides, nanoparticles, or compositions described herein are provided for use in immunizing against infection caused by RSV. In some embodiments, any one or more of the polypeptides, nanoparticles, or compositions described herein are provided for use in generating a protective immune response against future infection by RSV. In some embodiments, the protective immune response reduces the onset of infection, pneumonia, bronchiolitis, or asthma caused by RSV.

[0231] In some embodiments, the composition comprises a RSV F polypeptide described herein. In some embodiments, the composition comprises a RSV G polypeptide as described herein. In some embodiments, the composition comprises a RSV F polypeptide and a RSV G polypeptide as described herein. In some embodiments, the composition comprises a RSV G polypeptide and a RSV F polypeptide as described herein. In some embodiments, the composition comprises a RSV F polypeptide as described herein and a RSV G polypeptide as described herein.

[0232] In some embodiments, compositions comprising the RSV F polypeptides described herein induce a superior neutralizing response to RSV compared to immunization with a post-fusion RSV F polypeptide. In some embodiments, immunization with a RSV F polypeptide described herein (e.g., a polypeptide or nanoparticle comprising a RSV polypeptide described herein) induces a higher titer to a pre-fusion RSV F polypeptide compared to immunization with a post-fusion RSV F. In some embodiments, immunization with a RSV F polypeptide described herein induces a lower titer of antibodies to post-fusion RSV F compared to immunization with a post-fusion RSV F. In some embodiments, immunization with a RSV F polypeptide described herein induces a higher ratio of total antibodies to pre-fusion RSV F compared to immunization with a post-fusion RSV F. Immunization with a RSV antigen described herein may provide better protection against RSV compared to immunization with a post-fusion RSV F. It has been suggested that epitopes present in post-fusion RSV F and shared with pre-fusion F induce antibodies that are non-neutralizing and, in some cases, increase RSV infection. In some embodiments, compositions comprising the RSV F polypeptides described herein induce a higher neutralizing response to RSV while reducing antibodies to post-fusion RSV F. Thus, in some embodiments, compositions comprising the RSV F polypeptides described herein induce a higher RSV neutralizing titer against a post-fusion F binding reaction.

[0233] In some embodiments, immunization with the RSV antigens described herein comprises administering to a subject a post-fusion RSV immunization with F results in an improved safety profile. This improved safety profile may be related to blocking of non-neutralizing epitopes or insufficient neutralizing epitopes present in the post-fusion conformation. It has been reported that antibodies that bind to the post-fusion conformation can increase RSV infection through antibody-mediated virus infection. Thus, post-fusion antibodies that do not significantly neutralize the RSV virus, such as antibodies that recognize both pre-fusion and post-fusion conformations, may increase RSV infection.

[0234] In some embodiments, a composition comprising a RSV G polypeptide described herein elicits a neutralizing response against RSV.

[0235] In some embodiments, compositions comprising the RSV F and RSV G polypeptides described herein induce a neutralizing response against RSV. In some embodiments, compositions comprising the RSV F and RSV G polypeptides described herein provide improved protection against RSV, e.g., higher neutralizing titers than compositions that do not contain both antigens.

[0236] 1. Target In some embodiments, the subject is a mammal, hi some embodiments, the subject is a human.

[0237] In some embodiments, the subject is an adult (age greater than or equal to 18 years). In some embodiments, the subject is a child or adolescent (age less than 18 years). In some embodiments, the subject is an elderly (age greater than 60 years). In some embodiments, the subject is a non-elderly adult (age greater than or equal to 18 years and less than or equal to 60 years). do.

[0238] In some embodiments, more than one dose of the composition is administered to the subject, hi some embodiments, a booster dose improves the immune response.

[0239] In some embodiments, one or more of the antigenic polypeptides or compositions described herein are for use in a mammal, such as a primate (e.g., a non-human primate, such as a monkey (e.g., a macaque, such as a rhesus or cynomolgus monkey) or an ape), a rodent (e.g., a mouse or rat), or a domesticated mammal (e.g., a dog, rabbit, cat, horse, sheep, cow, goat, camel, or donkey). In some embodiments, one or more of the antigenic polypeptides or compositions described herein are for use in an avian species, such as poultry (e.g., a chicken, turkey, duck, goose, guinea fowl, or swan).

[0240] 2. Adjuvants As used herein, the adjuvant may be conjugated to ferritin via a surface-exposed amino acid, such as cysteine. Non-conjugated adjuvants may also be administered to a subject together with the antigenic ferritin polypeptide described herein. In some embodiments, administering an adjuvant together with an antigenic ferritin polypeptide produces higher titers of antibodies against the RSV polypeptide in a subject compared to administering the RSV polypeptide alone without the adjuvant or the antigenic ferritin polypeptide alone. The adjuvant may promote an earlier, stronger, or more sustained immune response to the antigenic polypeptide.

[0241] In some embodiments, the composition comprises one adjuvant. In some embodiments, the composition comprises more than one adjuvant. In some embodiments, the composition does not comprise an adjuvant.

[0242] In some embodiments, the adjuvant comprises aluminum. In some embodiments, the adjuvant is aluminum phosphate. In some embodiments, the adjuvant is alum (Alyhydrogel'85 2%; Brenntag - Catalog No. 21645-51-2).

[0243] In some embodiments, the adjuvant is an organic adjuvant. In some embodiments, the adjuvant is an oil-based adjuvant. In some embodiments, the adjuvant comprises an oil-in-water nanoemulsion.

[0244] In some embodiments, the adjuvant comprises squalene. In some embodiments, the adjuvant comprising squalene is Ribi (Sigma adjuvant system catalog number S6322-1vl), Addavax™ MF59, AS03, or AF03 (see US Patent No. 9703095). In some embodiments, the adjuvant comprising squalene is a nanoemulsion.

[0245] In some embodiments, the adjuvant comprises a polyacrylic acid polymer (PAA). In some embodiments, the adjuvant comprising PAA is SPA09 (see WO2017218819).

[0246] In some embodiments, the adjuvant comprises a non-metabolizable oil, hi some embodiments, the adjuvant comprises incomplete Freund's adjuvant (IFA).

[0247] In some embodiments, the adjuvant comprises a non-metabolizable oil and killed Mycobacterium tuberculosis. In some embodiments, the adjuvant is Freund's complete adjuvant (CFA).

[0248] In some embodiments, the adjuvant is lipopolysaccharide. In some embodiments, the adjuvant is monophosphoryl A (MPL or MPLA).

[0249] 3. Pharmaceutical Compositions In various embodiments, pharmaceutical compositions are provided that include the antigenic ferritin polypeptides and / or related entities described herein. In some embodiments, the pharmaceutical composition is an immunogenic composition (e.g., a vaccine) capable of eliciting an immune response, such as a protective immune response, against a pathogen.

[0250] For example, in some embodiments, the pharmaceutical composition may include one or more of the following: (1) an antigenic ferritin protein comprising (I) a mutation replacing a surface-exposed amino acid with a cysteine, and (II) an RSV polypeptide; (2) an antigenic ferritin protein comprising (I) a mutation replacing a surface-exposed amino acid with a cysteine ​​and an immunostimulatory moiety linked to the cysteine, and (II) an RSV polypeptide; (3) an antigenic ferritin protein comprising (I) a surface-exposed cysteine, (II) a peptide linker at the N-terminus of the ferritin protein, and (III) an RSV polypeptide at the N-terminus of the peptide linker. (4) an antigenic ferritin protein comprising (I) a mutation that replaces a surface-exposed amino acid with a cysteine ​​and an immunostimulatory moiety linked to the cysteine, (II) a mutation that replaces an internal cysteine ​​at position 31 of H. pylori ferritin with a non-cysteine, or a mutation that replaces an internal cysteine ​​at a position similar to position 31 of a non-H. pylori ferritin with a non-cysteine, as determined by pairwise or structural alignment, (III) a mutation that replaces a surface-exposed asparagine with a non-asparagine amino acid, and (IV) an RSV polypeptide; or (5) a ferritin particle comprising any of the foregoing ferritin proteins. In some embodiments, the pharmaceutical composition comprises an antigenic RSV polypeptide comprising an RSV F polypeptide, and / or an RSV polypeptide, in which an epitope of the RSV polypeptide shared between a pre-fusion RSV polypeptide and a post-fusion RSV polypeptide is blocked, wherein the RSV polypeptide comprises amino acid residues 62-69 and 196-209 of SEQ ID NO:26, and an asparagine corresponding to positions 328, 348, or 507 of SEQ ID NO:26, and optionally, the antigenic RSV polypeptide further comprises ferritin.

[0251] In some embodiments, the present invention provides pharmaceutical compositions comprising antibodies or other agents related to the antigenic polypeptides described herein.In one embodiment, the pharmaceutical compositions comprise antibodies that bind to and / or compete with the antigenic polypeptides described herein.Alternatively, the antibodies can recognize virus particles that comprise the RSV polypeptide components of the antigenic polypeptides described herein.

[0252] In some embodiments, the pharmaceutical compositions described herein are administered alone or in combination with one or more agents for enhancing immune response, such as adjuvants described herein. In some embodiments, the pharmaceutical composition further comprises an adjuvant as described above.

[0253] In some embodiments, the pharmaceutical composition further comprises a pharma- ceutically acceptable carrier or excipient. As used herein, the term "carrier" refers to a diluent, adjuvant, excipient, or vehicle with which the pharmaceutical composition is administered. In an exemplary embodiment, the carrier is a sterile liquid, such as water, and oils, including those of petroleum, animal, vegetable, or synthetic origin, such as oat oil. The carrier may include oleaginous oil, soybean oil, mineral oil, sesame oil, and the like. In some embodiments, the carrier is or includes one or more solid components. Pharmaceutically acceptable carriers may also include, but are not limited to, saline, buffered saline, dextrose, glycerol, ethanol, and combinations thereof. As used herein, an excipient is any non-therapeutic agent that can be included in a pharmaceutical composition, for example to provide or participate in a desired consistency or stabilizing effect. Suitable pharmaceutical excipients include, but are not limited to, starch, glucose, lactose, sucrose, gelatin, malt, rice, flour, chalk, silica gel, sodium stearate, glycerol monostearate, talc, sodium chloride, nonfat dry milk, glycerol, propylene glycol, water, ethanol, and the like. In various embodiments, the pharmaceutical composition is sterile.

[0254] In some embodiments, pharmaceutical compositions contain minor amounts of wetting agents or emulsifiers, or pH buffering agents.In some embodiments, pharmaceutical compositions can contain any of a variety of additives, such as stabilizers, buffers, or preservatives.In addition, they can contain auxiliary agents, stabilizers, thickeners, lubricants, and colorants.

[0255] In various embodiments, pharmaceutical compositions can be formulated to suit any desired mode of administration.For example, pharmaceutical compositions can be in the form of liquid, suspension, emulsion, drops, tablets, pills, pellets, capsules, capsules containing liquid, gelatin capsules, powders, sustained release preparations, suppositories, emulsions, aerosols, sprays, suspensions, lyophilized powders, frozen suspensions, dry powders, or any other form suitable for use.General discussions of pharmaceutical formulation and manufacture can be found, for example, in Remington's Pharmaceutical Sciences, 1999, incorporated herein by reference. th ed., Mack Publishing Co., Easton, PA, 1995.

[0256] The pharmaceutical composition can be administered via any route of administration. The routes of administration include, for example, oral, intradermal, intramuscular, intraperitoneal, intravenous, subcutaneous, intranasal, mucosal, epidural, sublingual, intranasal, intracerebral, intravaginal, transdermal, intrarectal, intratracheal instillation, bronchial instillation, inhalation, or topical routes of administration. Administration can be local or systemic. In some embodiments, administration is performed orally. In another embodiment, administration is by parenteral injection. In some cases, administration results in the release of the antigenic ferritin polypeptide described herein into the bloodstream. The mode of administration can be left to the discretion of the physician.

[0257] In some embodiments, the pharmaceutical compositions are suitable for parenteral administration (e.g., intravenous, intramuscular, intraperitoneal, and subcutaneous). Such compositions can be formulated, for example, as solutions, suspensions, dispersions, emulsions, and the like. They may also be prepared in the form of sterile solid compositions (e.g., lyophilized compositions) that can be dissolved or suspended in a sterile injectable medium immediately before use. For example, parenteral administration can be achieved by injection. In such embodiments, the injections are prepared in the usual form, i.e., liquid solutions or suspensions, solid forms suitable for solution or suspension in liquid prior to injection, or as emulsions. In some embodiments, injection solutions and suspensions are prepared from sterile powders, lyophilized powders, or granules.

[0258] In further embodiments, the pharmaceutical composition is formulated for delivery by inhalation (e.g., direct delivery to the lungs and respiratory tract). For example, the composition may take the form of a nasal spray or any other known aerosol formulation. In some embodiments, the preparation for inhalation or aerosol delivery comprises a plurality of particles. In some embodiments, such preparations may have an average particle size of about 1, about 2, about 3, about 4, about 5, about 6, about 7, about 8, about 9, about 10, about 11, about 12, or about 13 microns. In some embodiments, the preparation for inhalation or aerosol delivery is formulated as a dry powder. In some embodiments, the preparation for inhalation or aerosol delivery may be formulated as a dry powder. Preparations for aerosol delivery are formulated as wettable powders, for example through the inclusion of a wetting agent. In some embodiments, the wetting agent is selected from the group consisting of water, saline, or other liquids at physiological pH.

[0259] In some embodiments, pharmaceutical compositions according to the invention are administered as nasal or oral drops, hi some embodiments, a dose may comprise multiple drops (e.g., 1-100, 1-50, 1-20, 1-10, 1-5 drops, etc.).

[0260] The pharmaceutical composition of the present invention can be administered at any suitable dose to achieve the desired outcome. In some embodiments, the desired outcome is the induction of a long-lasting adaptive immune response against the source of the RSV polypeptide present in the antigenic ferritin polypeptide present in the composition. In some embodiments, the desired outcome is the reduction in the intensity, severity, frequency, and / or delay in the occurrence of one or more symptoms of an infection. In some embodiments, the desired outcome is the inhibition or prevention of an infection. The required dose varies from subject to subject depending on the species, age, weight, and general condition of the subject, the severity of the infection to be prevented or treated, the specific composition used, and its mode of administration.

[0261] In some embodiments, the pharmaceutical composition according to the present invention is administered in a single or multiple doses. In some embodiments, the pharmaceutical composition is administered in multiple doses administered on different days (e.g., a prime-boost vaccination strategy). In some embodiments, the pharmaceutical composition is administered as part of a booster regimen.

[0262] In various embodiments, the pharmaceutical composition is co-administered with one or more additional therapeutic agents. Co-administration does not require that the therapeutic agents be administered at the same time, provided that the pharmacological activity of the additional therapeutic agent and the active ingredient in the pharmaceutical composition overlaps in time, thereby exerting a combined therapeutic effect. In general, each agent is administered at a dose and time schedule determined for that agent.

[0263] 4. Nucleic acid / mRNA Also provided is the nucleic acid that codes for the antigenic polypeptide described herein.In some embodiments, the nucleic acid is mRNA.Any nucleic acid that can undergo translation to produce polypeptide is considered to be mRNA for the purpose of this disclosure.

[0264] 5. Kit Also provided herein are kits that include one or more of the antigenic polypeptides, nucleic acids, antigenic ferritin particles, antigenic lumazine synthase particles, compositions, or pharmaceutical compositions described herein. In some embodiments, the kits further include one or more of a solvent, solution, buffer, instructions, or desiccant.

[0265] [Table 1] [Table 2] [Table 3] [Table 4] [Table 5] [Table 6] [Table 7] [Table 8] [Table 9] [Table 10] [Table 11]

[0266] This description and the exemplary embodiments should not be construed as limiting. For purposes of the present specification and the appended claims, unless otherwise specified, all numbers expressing quantities, percentages or ratios and other numerical values ​​used in the specification and claims should be understood in all cases to be modified by the term "about" to the extent that they have not already been so modified. "About" indicates a degree of variation, for example, within 10%, 5%, 2% or 1%, that does not substantially affect the properties of the described subject matter. Thus, unless otherwise indicated, the numerical parameters set forth in the following specification and the appended claims are approximations that may vary depending on the desired properties to be obtained. At the very least, and not as an attempt to limit the application of the doctrine of equivalents to the scope of the claims, each numerical parameter should be interpreted at least in light of the number of reported significant digits and by applying ordinary rounding techniques.

[0267] It should be noted that, as used in this specification and the appended claims, the use of "a," "an," and "the," and any singular form includes plural referents, unless the singular form is expressly and unambiguously limited to one referent. As used herein, the term "comprises" and grammatical variations thereof are intended to be open-ended, such that the recitation of items in a list does not exclude other similar items that may be substituted for or added to the items in the list. EXAMPLES

[0268] The following examples are provided to illustrate certain disclosed embodiments and should not be construed in any way as limiting the scope of the disclosure.

[0269] 1. Design and characterization of modifications to the RSV F polypeptide Like other paramyxovirus F proteins, RSV F is expressed as a precursor protein with an N-terminal signal peptide and a C-terminal transmembrane domain that anchors the protein to the viral surface. RSV F undergoes intracellular cleavage by the protease furin to release a hydrophobic fusion peptide ("FP" in Figure 1A). The role of the fusion peptide is to bind to target cells during infection. Adjacent to the fusion peptide is heptad repeat region A (HRA), while heptad repeat region B (HRB) is adjacent to the transmembrane domain.

[0270] The crystal structures of the RSV F ectodomain trimer in pre- and post-fusion conformations demonstrate how the HRA and HRB regions undergo significant rearrangements to facilitate cell fusion events (FIG. 1B) (Swanson, KA et al., Proc Natl Acad Sci USA 108(23):9619-24 (2011); McLellan, JS et al., Science 342(6158):592-598 (2013); McLellan, JS et al., J Virol 85(15):7788-96 (2011); and McLellan, JS et al., Science 342(6158):592-8 (2013)). In the pre-fusion conformation, the heptad repeat A (HRA) region is associated with the globular head, and the tip of the fusion peptide is largely embedded in the center of the protein. The prefusion conformation contains several helices and involves certain contacts between the protomers to form a prefusion trimer.

[0271] A series of amino acid substitutions were designed to be stable between promoters. Exemplary substitutions include V207L; N228F; I217V and E218F; I221L and E222M; or Q224A and Q225L. All numbering of the RSV F amino acid sequence in the examples uses the numbering of SEQ ID NO:26.

[0272] The amino acid substitutions were designed to be helix stabilizing. is predicted to stabilize the helical domain of RSV F. Exemplary substitutions include N216P or I217P.

[0273] The amino acid substitutions were designed to be stabilizing within the protomer. Exemplary substitutions include V220I; or A74L and Q81L.

[0274] The amino acid substitutions were designed to be capping helices. Exemplary substitutions include N216P or I217P.

[0275] Amino acid substitutions were designed to reduce aggregation. Exemplary substitutions include V192E and L61Q.

[0276] Other amino acid substitutions were designed to fill the cavity by introducing hydrophobic amino acids such as N228F.

[0277] The amino acid substitutions E328N, S348N, and R507N were designed to add glycosylation sites by replacing non-asparagine residues with asparagine. It was hypothesized that the addition of non-native glycans could be used to block epitopes exposed in post-fusion RSV F on the surface of the pre-fusion F protein (FIG. 1B).

[0278] The desired RSV F construct was produced as a single-chain (scF) fusion protein with a hybrid ferritin containing an N-terminal bullfrog ferritin linker and H. pylori ferritin (pFerr) (FIG. 1A). The ferritin contained surface-exposed cysteines due to the K79C or S111C mutations (ferritin sequence numbering corresponds to SEQ ID NO: 208).

[0279] Standard cloning practices known in the art were used to produce various RSV Pre-F-NP and ferritin coding sequences. Generally speaking, DNA for the RSV F constructs with the substitutions described was synthesized and cloned into a mammalian expression vector by Genscript. RSV F DS-CAV1 and post-fusion F trimers were produced similarly to previously published protocols (see McLellan, JS et al., Science 342(6158):592-598 (2013)). The DS-CAV1 construct retains the C-terminal trimerization domain of RSV F, combined with a cavity-filling hydrophobic substitution. RSV F DS-CAV1 contains S155C-S290C disulfide multination (DS) and S190F-V207L ​​(CAV1).

[0280] Vectors encoding RSV F-ferritin nanoparticles, naked ferritin (not bound to RSV F), and RSV F trimers were transfected into 293EXPI cells, and expression products were harvested from conditioned medium after 4 days. RSV F nanoparticles were purified using conventional chromatography methods by a series of anionic Q column purifications at pH 7.0 and 8.5 (GE Healthcare, Cat#17-1154-01) followed by Superose6 SEC purification in PBS (GE Healthcare, Cat#90-1000-42). DS-CAV1 pre-fusion trimers and post-fusion trimers were stored at -80°C, and RSV F nanoparticles were stored at 4°C.

[0281] Electron microscopy was performed to determine the conformation of RSV F nanoparticles. RSV F nanoparticle preparations (30 μg / mL in 25 mM Tris, 50 mM NaCl) were absorbed onto 400 mesh carbon-coated grids (Electron Microscopy Sciences) and stained with 0.75% uranyl formate. Samples were analyzed using a JEOL 1200EX microscope operated at 80 kV. Micrographs were taken at 65°C. Images were acquired at 1,000x magnification and 2D class averages were prepared using methods conventional in the art by the EM company Nanoimaging Services, Inc. (San Diego, CA) (Figure 1D).

[0282] Expression and secretion of these RSV F polypeptides and ferritin-containing polypeptides (SEQ ID NOs: 1-8 and 11-15) by transiently transfected 293EXPI cells (Invitrogen) was assessed by anti-RSV F Western blot. All anti-RSV F Western blots were performed as described in McLellan et al., Science. 340(6136):1113-1117 (2013) and U.S. Patent No. 8,562,996 were used. As shown in Figure 2, many of the constructs were successfully expressed and secreted.

[0283] The RF8085 polypeptide (SEQ ID NO:1) represents the published single-chain mutant of DS-CAV1 RSV F fused to ferritin nanoparticles at the N-terminus (see McLellan, JS et al., Science 342(6158):592-598 (2013)). This construct contains the S155C-S290C double mutant (DS) of RSV F that retains antigen site 0.

[0284] The RF8106 polypeptide (SEQ ID NO: 9) has an I217P substitution in place of the two cysteines substituted in DS-CAV1. As shown in Figure 3, the RF8106 construct had significantly better expression in transiently transfected 293EXPI cells as assessed by anti-RSV F Western blot from conditioned medium after 4 days.

[0285] Size exclusion chromatography (SEC) of RF8106 showed the elution of a major peak at a retention time consistent with assembled ferritin particles fused to RSV antigens consistent with the fusion protein nanoparticles (Pre-F-NP, FIG. 4). Dynamic light scattering (DLS) analysis of RF8106 was performed under reduced (FIG. 5B) and non-reduced (FIG. 5A) conditions. Reduction was achieved by treatment with 2 mM TCEP. RF8106 has a radius of approximately 15 nm, which is consistent with incorporation into nanoparticles (24-mers) under reduced and non-reduced conditions. As described below, the stability of the fusion protein to reducing agents facilitates the conjugation of adjuvants to the fusion protein to form self-adjuvanting nanoparticles.

[0286] Next, the conjugation of the adjuvant to the fusion protein of the RSV F polypeptide and ferritin (Pre-F-NP) was evaluated. It was found that the free surface cysteines on ferritin could be used to attach additional moieties to the scF-pFerr fusion protein. Figure 6 shows the successful conjugation of a CpG oligodeoxynucleotide (ODN) having the sequence T*G*A*C*T*G*T*G*A*A*C*G*T*T*C*G*A*G*A*T*G*A (SEQ ID NO: 30, * indicates phosphorothioate linkage) to RF8106. This was evidenced by the increase in molecular weight as assessed by Coomassie-stained SDS-PAGE gel.

[0287] The effect of adding glycosylation sites using the E328N, S348N, and R507N substitutions (RF8117, SEQ ID NO: 17) was evaluated in 293EXPI cells transiently transfected with this construct as a fusion protein with ferritin (i.e., as the Pre-F-NP construct). RF8117 also contains the I217P substitution, similar to RF8113. As shown in FIG. 7, there was increased expression of RF8117 compared to the RF8085 control construct and the RF8113 construct (SEQ ID NO: 16, which contains the I217P proline substitution but does not contain the E328N, S348N, and R507N substitutions). RF8113 is similar to the previously described RF8106, except that the engineered cysteine ​​of ferritin is on ferritin residue K79C rather than S111C. RF The 8117 construct also showed an increase in molecular weight over RF8113 and RF8117, indicating successful addition of the glycan.

[0288] Figure 8 summarizes the modifications of RSV F nanoparticles that increased the proteolytic stability of Pre-F-NP. The starting construct was RF8117 (above). When the previous construct RF8085 was cloned into a CHO vector as RF8090 and transfected into CHO cells, it was observed that some material was cut between the F and ferritin moieties. It was suspected that arginine or lysine residues in the HRB region or in the linker between the F and ferritin moieties were cleaved with a trypsin-like protease. Mutations of lysine and arginine residues in this region were tested for expression in 293 cells. Figure 8 confirms that the K498L and R508Q mutations (in RF8122, SEQ ID NO: 18) do not affect or increase expression compared to RF8117. These mutations were combined with the mutations of RF8117 described herein, along with R523Q, to form the construct RF8140 (SEQ ID NO: 23).

[0289] In expression in 293 cells, a combination of single chain and proline (I217P) modifications resulted in greater improvement in expression (almost 5-fold) (exemplary constructs with these substitutions include RF8106 (SEQ ID NO: 9) and RF8113 (SEQ ID NO: 16)), and further improvement in expression and solubility due to the addition of RSV F glycosylation site modifications (exemplary constructs RF8117 (SEQ ID NO: 17) and RF8140 (SEQ ID NO: 23)). All of these constructs had the fusion peptide and p27 peptide region (amino acids 98-144 of SEQ ID NO: 26) replaced with the sequence GSGNVGL (SEQ ID NO: 31). However, when RF8090 was expressed in a production CHO cell line, an additional RSV F band was observed in the Western blot, suggesting that this construct is likely susceptible to proteolysis by trypsin-like cleavage at arginine or lysine residues.

[0290] The potential role of susceptibility to proteases was also explored. Substitution (knockout or KO) of K residues in the HRB domain and in the linker between the F and ferritin moieties was performed because these were predicted to be potential sites of K-mediated cleavage that was observed earlier in the production CHO cell lines. As shown in Figures 9A and 9B, both RF8117 and RF8140 expressed higher levels in the production CHO cell lines compared to RF8090, as measured by D25 Western blot or D25 and AM14 Octet analysis.

[0291] These data indicate that expression of the RSV F polypeptide, including the RSV Pre-F-NP antigen, can be improved by single chain construction and amino acid modification for helix capping, increased glycosylation, and removal of lysines or arginines susceptible to protease cleavage.

[0292] 2. Characterization of the fusion protein of RSV F and ferritin nanoparticles Prior to animal studies, the concentrations of DS-CAV1 and RSV F nanoparticles were analyzed by binding using an Octet. Binding of pre-fusion antigens to the pre-fusion specific antibodies D25 and AM14 was also measured using a ForteBio Octet instrument. All assays were performed in PBS at 30°C. Antibodies were loaded onto a Protein A (ProA) sensor chip (forteBio #18-5013) for 400 seconds and captured until near saturation was reached. The biosensor chip was then equilibrated in PBS for 90 seconds, then associated with a known concentration of antigen in PBS for 300 seconds, and then dissociated in PBS. Data analysis and curve fitting assuming a 1:1 interaction were performed with Octet Data Analysis HT10.0 software using an external standard curve of binding of purified Pre-F-NP of known concentration. An exemplary algorithm for determining Pre-F-NP concentration in CHO conditioned medium was performed using the Octet Data Analysis HT10.0 software using an external standard curve of binding of purified Pre-F-NP of known concentration. The assay results are shown in FIG. 9B.

[0293] 3. In vivo characterization of immune responses to RSV F polypeptides To evaluate the in vivo response to RSV antigens in mice, female BALBc mice were immunized intramuscularly with the indicated doses of RSV antigen at weeks 0, 3, and 6. Unless otherwise noted, RSV antigens were adjuvanted with AF03 by a bedside mixing strategy (e.g., in the experiments in Figures 10A-10B and 12A-12B, among others). That is, 50 μl of the relevant protein solution was mixed with 50 μl of Sanofi's adjuvant AF03 (a squalene-based emulsion, see Klucker et al., J Pharm Sci. 2012 Dec;101(12):4490-500) immediately before injecting 50 μl into each hind paw. For non-adjuvanted groups, antigens were mixed as above, but AF03 was replaced with an equal volume of PBS. For antigens mixed with SPA09 or alum, the above procedure was performed replacing AF03 with an equal volume of SPA09 or alum, respectively. No adverse effects from immunization were observed with any of the formulations. Blood was collected 1 day before the first immunization and at least 2 weeks after each injection (i.e., weeks 2, 5, and 8). Unless otherwise specified, data shown were from 2 weeks after the third injection (week 8, also noted as 2wp3). Typically, sera were collected from pre-immunized animals (note as naïve), 2 weeks after the second injection (post2 or 2wp2), or 2 weeks after the third injection (post3). rd or 2wp3).

[0294] For the Vero cell neutralization assay, serum was heat inactivated at 56°C for 30 min. 4-fold serial dilutions of the inactivated serum were made in Dulbecco's Modified Eagle Medium (DMEM) supplemented with 2% fetal bovine serum (FBS), 1% GlutaMAX, and 1% antibiotic-antimitotic agent. RSV virus stock was combined 1:1 with the diluted serum and incubated at 37°C for 1.5 h. The virus-serum mixture was then added at 100 μL per well to a 24-well plate containing a confluent Vero cell monolayer and incubated at 37°C, 5% CO2 for 1.5 h. The inoculum was then overlaid with 0.75% methylcellulose in 1 mL per well of DMEM supplemented with 2% FBS, 2% GlutaMAX, and 2% antibiotic-antimitotic agent. After 5 days of incubation at 37° C. in 5% CO 2 , the upper layer was removed and the monolayers were fixed with ice-cold methanol for 20 min.

[0295] Plates were then washed once with water and blocked with 5% non-fat dry milk in phosphate buffered saline (PBS) for 30 minutes at room temperature with gentle shaking. The blocking solution was then replaced with 2% dry milk in PBS containing 200 μL per well of a 1:2000 dilution of anti-RSV antibody conjugated to horseradish peroxidase (Abcam AB20686). After 3 hours of incubation at room temperature, plates were washed twice with water, developed with TrueBlue HRP substrate, washed twice more with water and air-dried.

[0296] Stained plaques were counted using a dissecting microscope. Neutralizing antibody titers were determined at the 60% reduction endpoint of mock-neutralized virus controls using the formula: 60% plaque reduction titer = (C / V x 0.4 - Low) / (High - Low) x (HSD - LSD) + LSD, where C / V = the mean number of RSV plaques in mock-neutralized virus control wells, Low and High are the mean number of RSV plaques at the two dilutions that bracket the C / V x 0.4 value of the serum sample, and HSD and LSD are the higher and lower serum dilution factors.

[0297] For the HAE neutralization assay, sera were heat inactivated at 56° C. for 30 min. Four-fold serial dilutions of the inactivated sera were neutralized in PneumaCult™-ALI 10X Supplement (Stem Cell Technologies, Inc., 05003) and 1% antibiotic. - PneumaCult™-ALI Basal Medium (Stem Cell Technologies, 05002) supplemented with antimitotic agents (hereafter referred to as medium). RSV virus stocks were combined 1:1 with diluted serum and incubated at 37°C for 1.5 hours. The virus-serum mixture was then added at 50 μL per well to 24-well plates containing fully differentiated HAE cells and incubated at 37°C, 5% CO2 for 1.5 hours. After incubation, the inoculum was removed and the wells were washed twice with medium to remove unbound virus and incubated at 37°C, 5% CO2 for an additional 20 hours. Infection events in cultures infected with RSV expressing the mKate(TagFP635) reporter were counted by fluorescence microscopy.

[0298] To detect infection with RSV not expressing the mKate reporter, pseudostratified epithelia were washed thoroughly with medium to remove mucus, then fixed with 4% paraformaldehyde for 30 min at room temperature, permeabilized with 0.25% Triton X-100 for 30 min, and blocked with DMEM supplemented with 2% FBS for 1 h at 37°C. The blocking solution was replaced with 100 μL per well of a mouse anti-RSV monoclonal antibody mixture (Millipore, MAB 858-4) diluted 1:200 in DMEM supplemented with 2% FBS, and the plates were incubated for 2 h at 37°C. The plates were then washed three times with PBS supplemented with 0.05% Tween 20. 100 μL of goat anti-mouse IgG (H+L) (Invitrogen, A11001) diluted 1:200 in DMEM supplemented with 2% FBS was added per well and plates were incubated overnight at 4°C. The following morning, plates were washed three times with PBS supplemented with 0.05% Tween 20 and the fluorescent signal was stabilized with ProLong Gold AntiFade and DAPI (Thermo Fisher Scientific, P36935) and counted under a fluorescent microscope. Neutralizing antibody titers were determined at the 60% reduction endpoint as described above.

[0299] For anti-F binding, either pre-fusion F (DS-CAV1) or post-fusion F was bound to an anti-HIS antibody chip on the Octet. Unless specified, all anti-F binding refers to anti-pre-fusion F trimer (DS-CAV1) binding. His6-tagged (SEQ ID NO: 230) RSV F trimer (DS-CAV1) or post-fusion F was preloaded onto an anti-penta-HIS (HIS1K) sensor chip (ForteBio #18-5122) for 400 seconds and captured until near saturation was reached. The biosensor chip was then equilibrated in Octet Wash Buffer for 90 seconds and allowed to associate with diluted serum for 300 seconds. The final response of the association curve was measured using Octet Data Analysis HT10.0 software, and the response was multiplied by the dilution factor (100 or 300) to obtain the final reported response.

[0300] For anti-Gcc binding, a trimerized dimer of Gcc peptide with a C-terminal HIS tag was used on the Octet chip as above. His6-tagged (SEQ ID NO: 230) Gcc (A2 strain) hexamer was preloaded onto an anti-penta-HIS (HIS1K) sensor chip (ForteBio #18-5122) for 400 seconds and captured until near saturation was reached. The biosensor chip was then equilibrated in Octet Wash Buffer for 90 seconds and associated with diluted serum for 300 seconds. The final response of the association curve was measured using Octet Data Analysis HT10.0 software, and the response was multiplied by the dilution factor (100 or 300) to obtain the final reported response.

[0301] For non-human primate (NHP) studies, NHPs were pre-screened for RSV responses (baseline was found to be below the detection limit for all assays).NHPs were immunized with 50 μg of RF8140 with the indicated adjuvants as in the mouse protocol above, but with a higher volume of adjuvant (Figures 11C-D and 18).

[0302] For non-human primate studies, the VERO neutralization assay was performed as described above. Pre-F binding was assessed by ELISA assay as follows.

[0303] NHP serum samples were serially diluted 2-fold (initial dilution 100-fold) and incubated for 1 h at 37°C on plates (1 μg / mL, 100 μL / well) coated with blocked RSV soluble F (Sinobiological #11049-V08B). RSV F-specific IgG was detected with horseradish peroxidase-conjugated anti-monkey IgG (BioRad AAI42P, 10,000-fold dilution) at 37°C for 90 min. Plates were developed with 3,3',5,5'-tetramethylbenzidine (TMB Tebu-Bio) and stopped with 1N HCl (Prolabo #30024290). Optical density (OD) was measured from 450 nm to 650 nm using a microplate reader (SpectraMax). RSV sF-specific IgG titers were calculated from titration curves using Softmax Pro software for OD values ​​ranging from 0.2 to 3.0 (standard mouse hyperimmune serum was added to each plate).

[0304] The reference IgG titers, expressed in arbitrary ELISA units (EU), corresponded to the reciprocal log10 of the dilution giving an OD of 1.0. The threshold for antibody detection was 20 (1.3 log10) EU. For graphing purposes, all final titers were expressed in log10. Each titer below 1.3 log10 was assigned an arbitrary titer of 1.0 log10.

[0305] To assess cell-mediated immunity in NHP studies, the IFNγ / IL-2 FluoroSpot kit (FS-2122-10, Mabtech) was used according to the manufacturer's instructions. Briefly, the membrane of the IPFL plate was pre-wetted with 35% ethanol and coated with capture antibodies (anti-IFNγ and anti-IL-2) overnight at 4°C.

[0306] Plates were then blocked with 200 μL / well of cell incubation medium containing 10% fetal calf serum (FCS) for 2 hours at 37°C. Medium was removed and stimuli were added to the wells: full-length F antigen (antigen-specific stimulation), anti-CD3 (positive control), or cell culture medium (unstimulated control). Macaque peripheral blood mononuclear cells (PBMCs) were thawed and counted. 400,000 cells were added per well and incubated for 24 hours at 37°C in a humidified incubator containing 5% CO2.

[0307] For detection, cells were removed and detection antibodies (conjugated anti-IFNγ and anti-IL-2) were added and incubated for 2 hours at room temperature. Fluorophore-conjugated reagents were then added and incubated for 1 hour at room temperature. Plates were emptied, dried and stored in the dark at room temperature until analysis. Anti-CD3 mAb was used as a positive control and all samples showed a response of >500 spot-forming counts (SFC) per million PBMCs, confirming acceptable sample quality. Spots detected in non-stimulated wells (cell culture medium) were subtracted from F antigen stimulated cells.

[0308] For analysis of human cells (or B cells), see Dauner et al., Vaccine 2017 An experiment similar to that referenced in Oct 4;35(41):5487-5494 was performed (FIG. 20). Cells were left untreated (treated with PBS) or treated with RSV F or RSV G polypeptides as noted at a dose of 100 ng. F-binding and G-binding responses were performed using the Luminex assay described in the literature with beads coated with pre-F trimer (DS-CAV1) or G ectodomain, respectively.

[0309] RF8117 (SEQ ID NO: 17) contains engineered glycosylation sites E328N, S348N, and R507N, which do not block D25 or AM14 binding as described above. These prefusion nanoparticles elicited immune responses similar to other prefusion antigens (DS-CA1). To demonstrate induction of IFN-γ-γ expression, groups of five mice were immunized three times with pre-F trimer (DS-CA1), post-fusion F, or RF8117 at doses of 1 μg or 0.1 μg, all with AF03 adjuvant, with three weeks between injections. Neutralizing titers of serum were tested by VERO cell assay two weeks after the third immunization. At the high dose, RF8117 induced neutralizing titers similar to pre-fusion controls and superior to post-fusion controls. At the low dose, RF8117 induced higher neutralizing titers than both pre-fusion and post-fusion controls (Figure 10A).

[0310] RSV Pre-F-NP has engineered glycosylation sites to block epitopes shared between pre-fusion and post-fusion conformations. We assessed whether these glycans inhibited neutralizing responses. RF8117 (SEQ ID NO: 17) with engineered glycans was compared to RF8113 (similar to RF8117 but lacking the engineered glycans, SEQ ID NO: 16) and a pre-fusion trimer control (DS-CAV1). Groups of five mice were immunized three times with doses of 1 μg or 0.1 μg, all with AF03 adjuvant, with three weeks between injections. Two weeks after the third immunization, serum neutralization titers were tested using the VERO cell assay. There were no significant differences at any dose between the RF8113 and RF8117 constructs as judged by neutralization titers (Figure 10B).

[0311] To demonstrate that the knockout of lysines and arginines in RF8140 (SEQ ID NO: 23) described herein does not affect the ability of the antigen to elicit a neutralizing response, the immunogenicity of RF8140 (SEQ ID NO: 25) was compared to that of the post-fusion F trimer (SEQ ID NO: 24) in mice (FIGS. 11A and 11B). At low doses (0.1 μg), RF8140 (SEQ ID NO: 25) elicits better neutralizing titers than the post-fusion trimer (SEQ ID NO: 24). To demonstrate that RF8140 (SEQ ID NO: 23) elicits an immune response in NHPs, NHPs were immunized with RF8140 (SEQ ID NO: 25) in the presence or absence of adjuvant (AF03). Figure 11C shows the RSV F binding response (ELISA titer), while Figure 11D compares the RSV neutralizing titers elicited by immunization with Pre-F-NP (RF8140, SEQ ID NO: 23). RF8140 (SEQ ID NO: 25) in both the absence and presence of adjuvant induces an immune response in NHPs.

[0312] Since it was shown that the engineered glycosylation sites of RF8117 (SEQ ID NO: 17) and RF8140 (SEQ ID NO: 23) do not prevent these antigens from eliciting a neutralizing response, it was desired to demonstrate that they block non- or poorly neutralizing epitopes shared between the pre-fusion and post-fusion conformations (Figure 12). Antibody responses against pre-fusion F (DS-CAV1, SEQ ID NO: 25) elicited by immunization with Pre-F-NP without engineered glycosylation (RF8113, SEQ ID NO: 16) or with engineered glycosylation (engineered Gly particle, RF8117, SEQ ID NO: 17) at high (1 μg) and low (0.1 μg) doses, as measured by Octet (Figure 12A). The responses elicited by either Pre-F-NP were similar. Antibody responses to post-fusion trimers elicited by immunization with Pre-F-NPs without engineered glycosylation (RF8113, SEQ ID NO: 16) or with engineered glycosylation (RF8117, SEQ ID NO: 17) at high (1 μg) and low (0.1 μg) doses as measured by Octet (Figure 12B). The post-fusion F binding response elicited by RF8117 (SEQ ID NO: 17) was significantly lower than that elicited by RF8113 (SEQ ID NO: 16). Thus, while both RF8113 and RF8117 elicit strong antibody responses to pre-fusion F, the post-fusion F antibody response elicited by RF8117 is largely suppressed. This is due to mapping of engineered glycans to shared pre- and post-fusion epitopes (Figure 2B).

[0313] Engineered glycosylation sites block non-neutralizing epitopes but increase neutralizing antibody titers To further demonstrate that engineered glycosylation sites are diverted to non-neutralizing antibody titers, the above data was analyzed in a different way (Figure 13). RSV neutralization titers measured by VERO cell assays elicited by immunization with Pre-F NPs (Wt glycan particles, RF8113, SEQ ID NO: 16) with wild-type glycosylation sites in a mouse study compared to Pre-F NPs (+glycan particles, RF8117, SEQ ID NO: 17) with the addition of engineered glycosylation sites were measured and were not significantly different (Figure 13A). Comparison of RSV post-fusion F trimer binding antibody responses elicited by immunization with Wt glycan particles (RF8113, SEQ ID NO: 16) and +glycan particles (RF8117, SEQ ID NO: 17) in a mouse study showed suppressed post-fusion F binding responses for Pre-F-NPs with engineered glycans (Figure 13B). To demonstrate that engineered glycans do not reduce functional neutralizing antibody responses, but do reduce non-neutralizing antibodies elicited against shared pre-fusion / post-fusion epitopes, thereby improving the ratio of neutralizing antibodies to total antibodies elicited by engineered glycan constructs, we plotted the ratio of neutralizing titers to F binding responses (Figure 13C). Thus, Pre-F-NPs with engineered glycans elicit superior neutralizing binding antibody profiles in mouse studies.

[0314] To demonstrate that ferritin nanoparticles can be used to improve the immunogenicity of RSV G central domain antigen, a method was developed to chemically conjugate Gcc peptide (SEQ ID NO: 29) to ferritin nanoparticles. Ferritin with the S111C mutation described herein can be conjugated with Gcc peptide (SEQ ID NO: 29) synthesized with a maleimide group on a PEG4 linker attached to the N-terminus via an NHS group. Gcc peptide with an N-terminal maleimide was synthesized and purified by HPLC by Peptide International (Louisville, KY, USA). When maleimide-Gcc antigen is added to ferritin S111C particles, the maleimide conjugates to free cysteines to form Gcc-NPs, which can be observed on a Coomassie-stained SDS-PAGE gel (Figure 14A). Conjugation efficiency is typically 50%-90%, but a model of Gcc peptide-ferritin nanoparticles (100% conjugation) is shown in Figure 14B.

[0315] To determine whether Gcc-NP induces a better immune response than Gcc peptide (SEQ ID NO:29), five mice per group were immunized with Gcc peptide or Gcc-NP (1.3 μg dose mixed 1:1 with RIBI for each immunization). Gcc binding responses (Octet) were compared to a representative group of naive mouse sera two weeks after the second immunization and two weeks after the third immunization (FIG. 14C). Neutralizing responses induced by immunization with Gcc peptide (SEQ ID NO:29) and Gcc-NP after the third injection in the mouse study were also compared in an HAE neutralization assay (FIG. 14D). Gcc-NP induces a better immune response than Gcc peptide alone, as judged by both Gcc binding and neutralizing responses.

[0316] To demonstrate that co-administration of RSV Pre-F-NP (RF8140) and Gcc-NP does not interfere with the ability of either antigen to elicit an immune response, mice were immunized with Pre-F-NP alone (RF8140, SEQ ID NO: 23), Gcc-NP (ferritin conjugated to Gcc peptide SEQ ID NO: 29), or a combination of Pre-F-NP (RF8140, SEQ ID NO: 23) and Gcc-NP (Figures 15A-C). All immunizations were adjuvanted with AF03. Mice immunized with RF8140 alone (Pre-F-NP) or RF8140 and Gcc-NP (Pre-F-NP+Gcc-NP) developed antibodies that bound to the pre-fusion F trimer (DS-CAV1, SEQ ID NO: 25), but mice immunized with Gcc-NP did not. Mice immunized with Gcc-NP alone (Gcc-NP) or RF8140 and Gcc-NP developed antibodies that bound to the Gcc peptide, whereas mice immunized with RF8140 alone did not. All animals immunized with Pre-F-NP alone, Gcc-NP alone, or co-administration of Pre-F-NP and Gcc-NP showed a positive HAE neutralization assay. Neutralizing responses were generated after the second and third immunizations as measured by i.

[0317] To determine whether co-administration of RSV Pre-F-NP and Gcc-NP interferes with the ability of either antigen to elicit neutralizing antibodies, neutralizing antibodies against F and G were examined in a depletion assay (Figure 16A-B). To demonstrate that the addition of Gcc-NP does not interfere with the ability of Pre-F-NP to elicit a neutralizing response, neutralizing titers were measured by F-sensitive VERO cell assay for the above groups (Figure 16A). To determine the quality of antigen depletion, sera from naive animals were also tested. In the VERO assay, sera from mice immunized with RF8140 (SEQ ID NO: 23) alone or RF8140 mixed with Gcc-NP elicited similar neutralizing responses, while Gcc-NP did not appear to elicit a neutralizing response in the F antibody-sensitive VERO assay. When antibodies binding to the pre-fusion trimer (DS-CAV1, SEQ ID NO: 25) were depleted from pooled sera from animals immunized with RF8140 (SEQ ID NO: 23) alone or with RF8140 (SEQ ID NO: 23) and Gcc-NP, a measurable reduction in neutralizing titers was observed in the VERO assay. When the above groups were measured for neutralizing titers in the HAE cell assay, it was observed that all immunized groups produced neutralizing responses in the F and G susceptibility assays (Figure 16B). Pooled sera from animals immunized with RF8140 (SEQ ID NO: 23) alone induced a neutralizing response in the HAE assay that could be depleted with the pre-fusion F trimer (DS-CAV1, SEQ ID NO: 25). Pooled sera from animals immunized with Gcc-NP alone induced a neutralizing response in the HAE assay that could be depleted with the G ectodomain (SEQ ID NO: 28). Pooled sera from animals immunized with both Pre-F-NP (RF8140, SEQ ID NO: 23) and Gcc-NP induced neutralizing responses in HAE assays that were not completely depleted by DS-CAV1 (SEQ ID NO: 25), but were completely depleted by subsequent depletion with DS-CAV1 and then the G ectodomain (SEQ ID NO: 28). Together, these data suggest that co-administration of Pre-F-NP and Gcc-NP does not interfere with the ability of either antigen to elicit neutralizing antibodies against pre-fusion F or G, respectively.

[0318] To demonstrate the effect of adjuvanting RF8117 (SEQ ID NO: 17) or RF8140 (SEQ ID NO: 23), mice were administered these constructs mixed with AF03, SPA09, or alum. In Fig. 17A, mice were immunized with 10 μg of antigen mixed with adjuvant, and in Fig. 17B, mice were immunized with 1 μg of antigen mixed with adjuvant. In Fig. 17A, neutralization titers were measured by VERO cell assay two weeks after the third immunization time point. Sera from mice immunized with RF8117 (SEQ ID NO: 17) unadjuvanted (No Adj), adjuvanted with alum, or adjuvanted with AF03 are shown. In Figure 17B, neutralization titers were measured by VERO cell assay for sera from mice immunized with RF8117 (SEQ ID NO: 17) adjuvanted with AF03, RF8117 (SEQ ID NO: 17) adjuvanted with SPA09, or RF8140 adjuvanted with AF03. In all cases, for either RF8117 (SEQ ID NO: 17) or RF8140 (SEQ ID NO: 23), the adjuvanted group of naive mice induced higher neutralization titers than the non-adjuvanted group. Mice immunized with RF8117 (SEQ ID NO: 17) or RF8140 (SEQ ID NO: 23) mixed with AF03 induced similar neutralizing responses, suggesting that the lysine and arginine mutations added to RF8140 (SEQ ID NO: 23) do not interfere with the ability of Pre-F-NP to induce a neutralizing response.

[0319] To further explore the adjuvant effect of AF03 and SPA09, non-human primates (NHPs) were immunized with RF8140 unadjuvanted, adjuvanted with AF03, or adjuvanted with two doses of SPA09 (Figure 18A). NHPs were immunized with 50 μg of antigen mixed with the indicated adjuvants on days 0 and 29, and immune responses were measured by ELISA or VERO neutralizing responses at the indicated time points. Prefusion F trimer ELISA Responses were measured in NHP sera after immunization with RF8140 unadjuvanted (No Adj), adjuvanted with AF03, or adjuvanted with SPA09 (500 μg and 2000 μg doses of SPA09 were used). At all time points, adjuvanting with AF03 or SPA09 induced superior neutralizing responses. Neutralizing titers of sera from the above NHP groups were also measured by VERO cell assay (FIG. 18B). In all cases, immunization with RF8140 with adjuvant induced higher neutralizing titers than the non-adjuvanted group at all time points.

[0320] The effect of direct conjugation of RF8140 (SEQ ID NO: 23) to the TLR7 / 8 agonist SM7 / 8 or the TLR9 agonist CpG was tested. The antigen was conjugated with the small molecule SM7 / 8 or CpG and mice were administered a 10 μg dose. RF8140 contains a mutation in its ferritin sequence that replaces a surface-exposed amino acid with a cysteine ​​(K79C), which can be used for conjugation by click chemistry. For comparison, mice were administered RF8140 unadjuvanted (No-adj) or adjuvanted by mixing with the small molecule at high or low doses (not conjugated), as shown in FIG. 19. Sera from animals after the second and third immunization were tested for pre-fusion F trimer binding.

[0321] In Figure 19A, pre-fusion F trimer binding responses were measured in the serum of naive mice, mice immunized with non-adjuvanted RF8140 (SEQ ID NO: 23), mice immunized with RF8140 (SEQ ID NO: 23) conjugated with SM7 / 8 adjuvant, RF8140 (SEQ ID NO: 23) adjuvanted with 130 ng of SM7 / 8, or RF8140 (SEQ ID NO: 23) adjuvanted with 20 μg of SM7 / 8. RF8140 (SEQ ID NO: 23) conjugated to SM7 / 8 induced higher pre-fusion F trimer binding titers than the non-adjuvanted or SM7 / 8 adjuvanted groups.

[0322] In Figure 19B, pre-fusion F trimer binding responses were measured in the serum of naive mice, mice immunized with non-adjuvanted RF8140 (SEQ ID NO: 23), mice immunized with RF8140 (SEQ ID NO: 23) conjugated with CpG adjuvant, RF8140 (SEQ ID NO: 23) adjuvanted with 680 ng of CpG, or RF8140 (SEQ ID NO: 23) adjuvanted with 20 μg of CpG. RF8140 (SEQ ID NO: 23) conjugated to SM7 / 8 induced higher pre-fusion F trimer binding titers than the non-adjuvanted or SM7 / 8 adjuvanted groups.

[0323] To demonstrate the ability of Pre-F-NP and Gcc-NP antigens to induce responses in human cells, experiments were performed on the MIMIC platform (Figures 20A-D). The MIMIC platform consists of only autologous human immune cells that can rapidly and reproducibly generate innate or acquired antigen-specific responses upon challenge. Previous studies have demonstrated the ability of the MIMIC system to recapitulate in vivo immune profiles against diverse targets such as HBV, tetanus toxoid, monoclonal antibodies, YF-VAX, and influenza B cell responses. RSV pre-fusion F trimer binding antibody responses induced by treatment with Pre-F-NP RF8140 (SEQ ID NO: 23) versus post-fusion F trimer (SEQ ID NO: 24) were compared in human B cells. A representative baseline response is shown for comparison (no treatment) (Figure 20A). The ratio of measured binding responses to pre-fusion F trimer (DS-CAV1, SEQ ID NO:25) vs. post-fusion F trimer (SEQ ID NO:24) induced by treatment with Pre-F-NP (RF8140, SEQ ID NO:23) vs. post-fusion F (SEQ ID NO:24) in human B cells is shown in FIG. 20C. Antibodies from MIMIC induced by treatment with different F antigens were measured using a VERO cell assay (FIG. 20B). Neutralizing titers induced by treatment with Pre-F-NP (RF8140, SEQ ID NO:23) vs. post-fusion F trimer (SEQ ID NO:24) in human B cells were compared to untreated control. Compared to the control group, RF8140 (SEQ ID NO: 23) was shown to induce a superior neutralizing response in human cells.

[0324] The magnitude of antibody response to RSV infection or F subunit vaccine candidates was determined based on the serostatus of human subjects studied in the MIMIC study. This was assessed by linear regression analysis. Donors with high circulating titers of pre-existing anti-pre-F IgG produced significantly higher anti-pre-F IgG after RSV treatment (Figure 20E, p=0.0041) and after post-F priming (Figure 20F, p=0.0019). Pre-F also showed an association between the levels of induced and pre-existing antibodies, although the correlation did not reach statistical significance. It is noteworthy that, unlike the other treatments, pre-F-NP induced relatively high levels of anti-pre-F IgG from donors with low pre-existing antibodies as well as from donors with high pre-existing anti-pre-F IgG (Figure 20F). This indicates that pre-F-NP can effectively restore (or enhance) antibody responses even from donors with low levels of pre-existing IgG.

[0325] To demonstrate that Gcc-NP induces a better G antibody response than Gcc peptide (SEQ ID NO: 29) alone, human cells were treated with Gcc peptide alone (SEQ ID NO: 29) or Gcc peptide conjugated to nanoparticles (Gcc-NP) in human B cells. Gcc-NP induced a better G binding antibody response (Figure 20G). Combined, these data suggest that Pre-F-NP and Gcc-NP induce an immune response in human immunity.

[0326] 4. In vivo characterization of immune responses to RSV Gcc-ferritin nanoparticles RSV Gcc-NP was prepared as described above. To evaluate the in vivo response to RSV Gcc-NP in mice, female BALBc mice were immunized intramuscularly with the indicated doses of RSV antigen at weeks 0, 3, and 6, using either a high (5 μg) or low (0.5 μg) dose of antigen. Unless otherwise noted, RSV Gcc-NP was adjuvanted with AF03 by a bedside mixing strategy; that is, 50 μl of protein solution was mixed with 50 μl of Sanofi's adjuvant AF03 (a squalene-based emulsion, see Klucker et al., J Pharm Sci. 2012 Dec;101(12):4490-500) immediately prior to injection of 50 μl into each hind paw. No adverse effects from immunization were observed. Blood was collected 1 day before the first immunization and at least 2 weeks after each injection (i.e., weeks 2, 5, and 8). Unless otherwise specified, data shown are from 2 weeks after the third injection (week 8, also noted as 2wp3). Typically, sera were collected from pre-immunized animals (note naive), 2 weeks after the second injection (post2 or 2wp2), or 2 weeks after the third injection (post3). rd or 2wp3).

[0327] For the HAE neutralization assay, serum was heat inactivated at 56°C for 30 min. 4-fold serial dilutions of the inactivated serum were made in PneumaCult™-ALI 10X Supplement (Stem Cell Technologies, 05003) and PneumaCult™-ALI Basal Medium (Stem Cell Technologies, 05002) supplemented with 1% antibiotic-antimitotic agent (hereafter referred to as medium). RSV virus stock was combined 1:1 with the diluted serum and incubated at 37°C for 1.5 h. The virus-serum mixture was then added at 50 μL per well to a 24-well plate containing fully differentiated HAE cells and incubated at 37°C, 5% CO2 for 1 h. After incubation, the inoculum was removed and the wells were washed twice with medium to remove unbound virus and incubated at 37°C, 5% CO2 for an additional 20 h. In cultures infected with RSV expressing the mKate(TagFP635) reporter Infectious events in the cultures were counted under a fluorescent microscope.

[0328] To detect infection with RSV that does not express the mKate reporter (RSV B strain neutralization), pseudostratified epithelia were washed thoroughly with medium to remove mucus, then fixed with 4% paraformaldehyde for 30 min at room temperature, permeabilized with 0.25% Triton X-100 for 30 min, and blocked with DMEM supplemented with 2% FBS for 1 h at 37°C. The blocking solution was replaced with 100 μL per well of a mouse anti-RSV monoclonal antibody mixture (Millipore, MAB 858-4) diluted 1:200 in DMEM supplemented with 2% FBS, and the plates were incubated for 2 h at 37°C. The plates were then washed three times with PBS supplemented with 0.05% Tween 20. 100 μL of goat anti-mouse IgG (H+L) (Invitrogen, A11001) diluted 1:200 in DMEM supplemented with 2% FBS was added per well and plates were incubated overnight at 4°C. The following morning, plates were washed three times with PBS supplemented with 0.05% Tween 20 and the fluorescent signal was stabilized with ProLong Gold AntiFade and DAPI (Thermo Fisher Scientific, P36935) and counted under a fluorescent microscope. Neutralizing antibody titers were determined at the 60% reduction endpoint.

[0329] To demonstrate that the induction of neutralizing responses by RSV G antigen is improved by high polyvalency, mice were immunized with RSV F antigen. All immunizations were adjuvanted with AF03. Mice were immunized with RSV Gcc-NP formulated with AF03, and neutralizing titers were measured 2 weeks after the second injection and 2 weeks after the third injection (Figures 21A-C). RSV Gcc-NP induced a neutralizing response that was related to naive mouse serum. Two weeks after the second immunization (Figure 21A) and two weeks after the third immunization (Figure 21B), mice immunized with Gcc-NP containing Gcc from the A2 strain showed a neutralizing response against the RSV A strain. Two weeks after the third injection, Gcc-NP also induced a neutralizing response against the RSV B1 strain (Figure 21C).

[0330] For anti-Gcc binding, trimerized dimers of Gcc peptide with a C-terminal HIS tag were used on the Octet chip. His6-tagged Gcc (A2 strain) hexamers or His6-tagged Gcc (B1 strain) hexamers were preloaded onto an anti-penta-HIS (HIS1K) sensor chip (ForteBio #18-5122) for 400 seconds and captured until near saturation was reached. The biosensor chip was then equilibrated in Octet Wash Buffer for 90 seconds and associated with diluted serum for 300 seconds. The final response of the association curve was measured using Octet Data Analysis HT10.0 software, and the response was multiplied by the dilution factor (100 or 300) to obtain the final reported response.

[0331] To determine whether RSV Gcc-NP induces a Gcc-binding immune response, the sera from the above immunizations were tested for their ability to bind to Gcc A2 hexamers or Gcc B1 hexamers. Gcc-binding responses at high doses (FIGS. 22A and 23A) and low doses (FIGS. 22B and 23B) were tested 2 weeks after the second immunization and 2 weeks after the third immunization. For both the A2 strain (FIGS. 22A-22B) and the B1 strain (FIGS. 23A-23B), RSV Gcc-NP induced binding responses related to naive mouse sera.

[0332] 5. Responses to Pre-F-NP and Gcc-NP in Human Cells To demonstrate the ability of Pre-F-NPs and Gcc-NPs to induce responses in human cells, experiments were performed on the MIMIC platform, which consists exclusively of autologous human immune cells that can rapidly and reproducibly generate innate and acquired antigen-specific responses upon challenge. Previous studies have demonstrated that the MIMIC system recapitulates in vivo immune profiles against diverse targets, including HBV, tetanus toxoid, monoclonal antibodies, YF-VAX, and influenza B cell responses. The ability of the antibody to bind to the RSV pre-fusion F trimer has been demonstrated. The RSV pre-fusion F trimer binding antibody responses induced by treatment with Pre-F-NP RF8140 (SEQ ID NO: 23) versus post-fusion F trimer (SEQ ID NO: 24) were compared in human B cells and compared to representative baseline responses. The ratio of measured binding responses to pre-fusion F trimer (DS-CAV1, SEQ ID NO: 25) versus post-fusion F trimer (SEQ ID NO: 24) induced by treatment with Pre-F-NP (RF8140, SEQ ID NO: 23) versus post-fusion F (SEQ ID NO: 24) in human B cells was determined. Antibodies from MIMIC induced by treatment with different F antigens were measured using a VERO cell assay. The neutralization titers induced by treatment with Pre-F-NP (RF8140, SEQ ID NO: 23) versus post-fusion F trimer (SEQ ID NO: 24) in human B cells were compared to untreated groups, showing that RF8140 (SEQ ID NO: 23) induces superior neutralizing responses in human cells. To demonstrate that Gcc-NP induces a better G antibody response than Gcc peptide (SEQ ID NO: 29) alone, human cells were treated with Gcc peptide alone (SEQ ID NO: 29) or Gcc peptide conjugated to nanoparticles (Gcc-NP) in human B cells. Gcc-NP induced a better G binding antibody response. Thus, Pre-F-NP and Gcc-NP induced an immune response in human immune cells.

Claims

1. An antigenic RSV polypeptide comprising an RSV F polypeptide, wherein an epitope of the RSV polypeptide shared between pre-fusion RSV F and post-fusion RSV F is blocked.

2. 1. An antigenic RSV polypeptide comprising an RSV F polypeptide, the RSV F polypeptide comprising amino acid residues 62-69 and 196-209 of SEQ ID NO:26, as well as an asparagine corresponding to positions 328, 348, or 507 of SEQ ID NO:

26.

3. 3. The antigenic RSV polypeptide of claim 2, wherein an epitope of the RSV polypeptide shared between pre-fusion RSV F and post-fusion RSV F is blocked.

4. The antigenic RSV polypeptide of any one of claims 1 to 3, comprising a pre-fusion RSV F.

5. 5. The antigenic RSV polypeptide of any one of claims 1 to 4, which is recognized by a pre-fusion RSV F-specific antibody selected from D25 or AM14.

6. 6. The antigenic RSV polypeptide of claim 4 or 5, wherein the pre-fusion RSV F comprises an epitope that is not found on the post-fusion RSV F.

7. The antigenic RSV polypeptide of any one of claims 1 to 3, comprising a post-fusion RSV F.

8. 7. The antigenic RSV polypeptide of any one of claims 1 or 3-6, wherein the epitope is blocked with an asparagine-linked N-glycan.

9. 9. The antigenic RSV polypeptide of claim 8, wherein the asparagine corresponds to a non-asparagine residue in the wild-type RSV F sequence (SEQ ID NO:26), and optionally the non-asparagine residue corresponds to positions 328, 348, or 507 of SEQ ID NO:

26.

10. The antigenic RSV polypeptide of any one of claims 1 to 9, further comprising a ferritin protein.

11. 11. The antigenic RSV polypeptide of claim 10, wherein the ferritin comprises a mutation that replaces a surface-exposed amino acid with a cysteine.

12. 1. An antigenic RSV polypeptide comprising an RSV F polypeptide and a ferritin protein, the ferritin protein comprising a mutation that replaces a surface exposed amino acid with a cysteine.

13. Ferritin is H. pylori ferritin E12C, S26C, S72C 13. The antigenic RSV polypeptide of claim 11 or 12, comprising one or more of the following mutations: A75C, K79C, S100C, and S111C, or one or more corresponding mutations in a non-H. pylori ferritin as determined by pairwise or structural alignment.

14. One or more immune stimuli linked to ferritin via surface-exposed amino acids.

14. The antigenic RSV polypeptide of any one of claims 10 to 13, comprising a surface exposed amino acid, optionally a cysteine ​​resulting from a mutation.

15. The antigenic RSV polypeptide of any one of claims 10-14, wherein the ferritin comprises a mutation that replaces a surface-exposed asparagine with a non-asparagine amino acid, optionally wherein the asparagine is at position 19 of H. pylori ferritin or at an analogous position of a non-H. pylori ferritin as determined by pairwise or structural alignment.

16. The antigenic RSV polypeptide of any one of claims 10-15, wherein the ferritin comprises a mutation replacing an internal cysteine ​​with a non-cysteine ​​amino acid, and optionally the internal cysteine ​​is at position 31 of H. pylori ferritin or at a position corresponding to position 31 of H. pylori ferritin as determined by pairwise or structural alignment.

17. 17. The antigenic RSV polypeptide of any one of claims 10-16, wherein the RSV F polypeptide comprises an epitope not found on post-fusion RSV F that is a site 0 epitope, optionally the site 0 epitope comprising amino acid residues 62-69 and 196-209 of SEQ ID NO:

26.

18. 18. The antigenic RSV polypeptide of any one of claims 1-17, wherein the RSV F polypeptide comprises an asparagine at a position corresponding to position 328 of SEQ ID NO:

26.

19. 19. The antigenic RSV polypeptide of any one of claims 1-18, wherein the RSV F polypeptide comprises an asparagine at a position corresponding to position 348 of SEQ ID NO:

26.

20. 20. The antigenic RSV polypeptide of any one of claims 1-19, wherein the RSV F polypeptide comprises an asparagine at a position corresponding to position 507 of SEQ ID NO:

26.

21. 21. The antigenic RSV polypeptide of any one of claims 1-20, wherein the RSV F polypeptide comprises a leucine at a position corresponding to lysine 498 of SEQ ID NO:

26.

22. 22. The antigenic RSV polypeptide of any one of claims 1-21, wherein the RSV F polypeptide comprises a proline at a position corresponding to isoleucine 217 of SEQ ID NO:

26.

23. 23. The antigenic RSV polypeptide of any one of claims 1-22, wherein the RSV F polypeptide comprises an amino acid other than cysteine ​​at a position corresponding to position 155 of SEQ ID NO:26 and / or an amino acid other than cysteine ​​at a position corresponding to position 290 of SEQ ID NO:

26.

24. 24. The antigenic RSV polypeptide of any one of claims 1 to 23, comprising a serine at a position corresponding to position 155 of SEQ ID NO:26 and / or a serine at a position corresponding to position 290 of SEQ ID NO:

26.

25. 25. The antigenic RSV polypeptide of any one of claims 1 to 24, wherein the RSV F polypeptide lacks a furin cleavage site, and optionally a linker is present in place of the furin cleavage site.

26. 26. The antigenic RSV polypeptide of any one of claims 1-25, wherein the RSV F polypeptide comprises a sequence having at least 85%, 90%, 95%, 97%, 98%, 99%, or 99.5% identity to amino acids 1-478 of SEQ ID NO:

17.

27. The RSV F polypeptide has at least 85%, 90%, 95% identity with the sequence of SEQ ID NO:

17.

27. The antigenic RSV polypeptide of any one of claims 1 to 26, comprising a sequence having 97%, 98%, 99%, or 99.5% identity to said polypeptide.

28. 28. The antigenic RSV polypeptide of claim 26 or 27, comprising amino acids 1 to 478 of SEQ ID NO:

17.

29. 20. The antigenic RSV polypeptide of any one of claims 1-19, wherein the RSV polypeptide comprises a sequence having at least 85%, 90%, 95%, 97%, 98%, 99%, or 99.5% identity to amino acids 1-478 of SEQ ID NO:

23.

30. 30. The antigenic RSV polypeptide of any one of claims 1-19 or 29, wherein the RSV polypeptide comprises a sequence having at least 85%, 90%, 95%, 97%, 98%, 99%, 99%, or 99.5% identity to the sequence of SEQ ID NO:

23.

31. 31. The antigenic RSV polypeptide of claim 29 or 30, comprising amino acids 1 to 478 of SEQ ID NO:

23.

32. 32. The antigenic RSV polypeptide of any one of claims 1 to 31, comprising a sequence as set forth in any one of SEQ ID NOs: 3 to 23.

33. A ferritin particle comprising an antigenic RSV polypeptide according to any one of claims 10 to 32.

34. 34. A composition comprising an antigenic RSV polypeptide or ferritin particle according to any one of claims 1 to 33, and an RSV G polypeptide.

35. A composition comprising an antigenic RSV polypeptide or ferritin particle according to any one of claims 1 to 33, or the composition according to claim 34, further comprising a pharma- ceutically acceptable carrier.

36. 36. An antigenic RSV polypeptide, ferritin particle or composition according to any one of claims 1 to 35 for use in a method of inducing an immune response against RSV or for protecting a subject against RSV infection.

37. A method of inducing an immune response against RSV or protecting a subject against RSV infection comprising administering to a subject any one or more of an antigenic RSV polypeptide, ferritin particle, or composition of any one of claims 1 to 36.

38. 38. The antigenic RSV polypeptide, ferritin particle, composition, or method of claim 36 or 37, wherein the subject is a human.

39. A nucleic acid encoding an antigenic RSV polypeptide according to any one of claims 1 to 32, optionally wherein the nucleic acid is an mRNA.

Images