Screening method of TTR (transthyretin) small-molecule inhibitors
A technology of small molecule inhibitors and screening methods, which is applied in the fields of instruments, computing, and electronic digital data processing, etc., can solve problems such as unclear causes of aggregation, metabolic disorders, and instability, so as to save time and research funds and improve reliability. performance, and the effect of improving the screening speed
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[0018] The technical scheme of the present invention is described below with specific examples, but protection scope of the present invention is not limited thereto:
[0019] 1. Determine the PDB data of TTR protein molecules
[0020] Obtain the PDB files (PDB numbers 2QGB, 2OGC, 2OGD, 2OGE) of TTR protein molecules from the RSCB PDB database (http: / / www.rcsb.org / ), use the Sybyl-X1.2 software of Tripos Company (http: / / tripos.com / ) to preprocess it.
[0021] 2. Optimize inhibitor molecule and build 3D-QSAR model
[0022] Gaussian09 software (http: / / www.gaussian.com / ) was used to optimize the inhibitor molecule, and the optimized structure was imported into the Sybyl-X1.2 software package, and the template skeleton alignment method was used for molecular alignment. We use the starch fibrillation rate data determined by the Kelly group (Johnson, S.M.et al.J.Med.Chem.2008, 51(2):260-270), and take 1g (100-F.F.) to represent its inhibition of starch fibrillation Ability to act...
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