Kit for detecting expression level of human ERCC1 (excision repair cross complementation 1) through PCR (polymerase chain reaction) method
A gene expression level and kit technology, applied in the field of molecular biology, can solve the problems of not using RNA calibrator, not reducing experimental errors, and not being able to obtain mutual comparisons, etc., to achieve elimination of non-experimental differences, high specificity, and reduction of effect of error
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Embodiment 1
[0052] The determination of embodiment 1 calibrator cell
[0053] 1 Cell activation and culture methods:
[0054] Use T25 flasks to culture alternative standard cell lines, such as: human breast cancer cell line T47D, human breast cancer cell line MCF-7, human non-small cell lung cancer cell line A549, human colon cancer cell line Lovo and other cells, culture medium Use 1640.
[0055] Observe the cell growth every day. If the color of the medium turns yellow, do the following: absorb the old medium and wash the cells once with about 3ml of PBS, shake gently and then absorb the PBS, absorb 5ml of the 1640 medium into a T25 bottle, and gently Shake gently, continue to culture at 37°C, 5% CO 2 In the incubator (generally replace the culture medium every 1 to 2 days);
[0056] Observe the growth of the cells. If the cells are 90% to 100% full, proceed as follows: absorb the old culture medium, wash the culture bottle with about 3ml of PBS, shake it gently, absorb the PBS, add ...
Embodiment 2
[0070] Embodiment 2 detects the kit of gene expression level
[0071] The kit for detecting the expression level of human ERCC1 gene by PCR method includes:
[0072] Primers corresponding to amplifying the human ERCC1 gene:
[0073] ERCC1 upstream primer: 5′-GAAGGACAAACGGGGGGT-3′
[0074] ERCC1 downstream primer: 5′-AGTGGGTAGCTCTGTGT-3′
[0075] Primers corresponding to amplifying the GAPDH internal reference gene:
[0076] GAPDH upstream primer: 5′-GAAGGTGCAAGGTCGGAGT-3′
[0077] GAPDH downstream primer: 5′-GAAGATGGTAGCTGGGATTTC-3′
[0078] Fluorescent probes corresponding to the ERCC1 gene and the GAPDH gene are also included, which are:
[0079] 5′-FAM-AATTTCTTCCCTGCTGGCGGCCC-BHQ1-3′
[0080] 5′-FAM-CAAGCTTCCCAGTCTCAGCC-BHQ1-3′
[0081] The above primers and probes were synthesized by Shanghai Sangong Co., Ltd.
[0082] Calibrator cells: Human breast cancer cell line T47D was used.
[0083] The kit also includes a positive control: replace the template with a recom...
Embodiment 3
[0091] RNA Extraction and Transcription of Example 3 Samples
[0092] Randomly select 40 clinical samples of non-small cell lung cancer and 10 samples of normal lung tissue. The sources of non-small cell lung cancer samples are as follows:
[0093] (1) Complete surgical resection for patients with non-small cell lung cancer
[0094] (2) The tumor stage is stage Ⅰ-Ⅲ.
[0095] (3) The age of the patient is between 25-75 years old.
[0096] (4) Not receiving chemotherapy or radiotherapy, not suffering from other tumors (except non-melanoma skin cancer or cervical carcinoma in situ)
[0097] Steps:
[0098] 1. Extraction of RNA: 40 cases of non-small cell lung cancer clinical cancer tissues and corresponding normal tissue samples and 10 cases of normal lung tissue samples were collected, and the total RNA of cancer tissues and normal tissues was extracted according to the method of Omega paraffin tissue RNA extraction and purification. The purity and concentration of RNA were ...
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