Molecular marker for identifying fruit mulberry variety 'Guangdong mulberry 143', identification primer group, kit and application
A molecular marker and detection kit technology, applied in the identification of variety resources and germplasm innovation, can solve the problems of poor stability, long test cycle, affecting the validity and authority of new variety identification, etc.
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[0034] Example 1 Obtained by Screening of Specific Primer Sequences of New Fruit Mulberry Variety 'Yuechen 143'
[0035] 1. Selection of SSR primers
[0036] Use MISA software to search the genome sequence in the mulberry genome database, and retrieve the SSR sites in the genome sequence. The length of the retrieved SSR motif repeating unit is 2 to 6 nucleotides, and set 2, 3, and 4 respectively , 5, 6 nucleotides, the minimum number of search repetitions is 6, 5, 5, 4, 4 times, and the length of the flanking sequence of the SSR site is ≥ 150bp, according to the searched SSR site, use Primer3v2.3.4 (http : / / primer3.sourcego-rge.net) software to design SSR primers, the design criteria are: the length of the primer is 18-25bp, the annealing temperature is 57-63°C, the GC content is 40-70%, and the length of the PCR product is 100- 300bp, randomly select SSR sites that can be compared with the NCBI non-redundant protein database to synthesize 300 pairs of primers, each pair of p...
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