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Mutation detection kit for vestibular aqueduct enlargement/Pendred syndrome virulence gene SLC26A4

A kit and genetic technology, applied in the field of genetic testing, can solve the problem of undetectable c.2073dupT locus and achieve the effect of reducing the burden and reducing the birth rate

Pending Publication Date: 2020-04-28
FOURTH MILITARY MEDICAL UNIVERSITY
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0006] Chinese patents CN109355374A, CN109536602A, and CN109680057A have disclosed kits for detecting mutations of the SLC26A4 gene c.368C>T, c.1656T>G, c.85G>A, but due to the independence of different sites (c.368C> T, c.1656T>G, c.85G>A are located on exons 4, 15, and 2 of the SLC26A4 gene respectively, and there is no linkage relationship) and the genetic heterogeneity of patients with vestibular aqueduct enlargement, the above reagents should be used The cassette cannot yet detect the c.2073dupT site (located in exon 18)

Method used

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  • Mutation detection kit for vestibular aqueduct enlargement/Pendred syndrome virulence gene SLC26A4
  • Mutation detection kit for vestibular aqueduct enlargement/Pendred syndrome virulence gene SLC26A4
  • Mutation detection kit for vestibular aqueduct enlargement/Pendred syndrome virulence gene SLC26A4

Examples

Experimental program
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Effect test

example 1

[0045] Collect various sensorineural deafness patients through deaf clinics, and establish a deafness sample resource bank. On the premise of the patient's voluntary consent, after signing the informed consent, 3-5mL blood samples were collected, and an outpatient medical record database was established to record the patient's condition, family history and contact information in detail. Then, use the kit to extract the genomic DNA, put it into the warehouse after quantification, and store it at -20°C. Each DNA sample corresponds to the registered patient's clinical data in detail. Then, use the online primer design software Primer3 to design primers (the amplified target fragment includes exon 18 at position 2073 and its flanking sequences), use genomic DNA as a template, PCR amplify the target fragment, and sequence. The sequencing primers were the same as the PCR amplification primers, and were sequenced in the forward and reverse directions using the 3730 DNA sequencer from...

example 2

[0150] Amplification primers (design completed in January 2019) are as follows, others are the same as Example 1:

[0151] SLC26A4-F2:5'-TTTCTCCAATCAGCAGGGCC-3';

[0152] SLC26A4-R2: 5'-CTTAGTTCCTTGGAACACTTATTC-3'.

[0153] The Fourth Military Medical University of the Chinese People's Liberation Army

[0154] Vestibular aqueduct enlargement / Pendred syndrome pathogenic gene SLC26A4 mutation detection kit

[0155] 4

[0156] 1

[0157] 19

[0158] DNA

[0159] Synthetic

[0160] 1

[0161] gcacctccac gctatcaag 19

[0162] 2

[0163] 19

[0164] DNA

[0165] Synthetic

[0166] 2

[0167] ggaatgaagc agtgccaga 19

[0168] 3

[0169] 19

[0170] DNA

[0171] Synthetic

[0172] 3

[0173] ttctccaatc agcagggcc 19

[0174] 4

[0175] 24

[0176] DNA

[0177] Synthetic

[0178] 4

[0179] cttagttcct tggaacactt attc 24

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Abstract

The invention discloses a mutation detection kit for a vestibular aqueduct enlargement / Pendred syndrome virulence gene SLC26A4. The kit comprises a reagent used for extracting DNA from a to-be-detected sample, a PCR reaction reagent used for amplifying the DNA of the sample, and a reagent used for sequencing a PCR amplification product, wherein the PCR reaction reagent used for amplifying the DNAof the sample comprises a PCR primer. The kit provided by the invention is used for detecting whether a patient has the c.2073 dupT mutation of the SLC26A4 gene or not, so the cause of the vestibularaqueduct enlargement / Pendred syndrome is diagnosed; the kit is beneficial to clinically carrying out SLC26A4 mutation screening work on patients with the vestibular aqueduct enlargement / Pendred syndrome, and provides a basis for diagnosis of the patients with the vestibular aqueduct enlargement / Pendred syndrome.

Description

technical field [0001] The invention relates to the field of gene detection, in particular to a typing detection kit for SLC26A4 gene mutation site c.2073dupT (p.A693Cfs*7) used in clinical diagnosis of vestibular aqueduct enlargement / Pendred syndrome. Background technique [0002] In 1997, Everett first reported that the causative gene of Pendred syndrome was SLC26A4 gene. Pendred syndrome manifests as congenital sensorineural deafness, cochlear malformation (dilated vestibular aqueduct or Mondini malformation) combined with goiter, and its inheritance mode is autosomal recessive. In 1999, Usami conducted full sequence screening of the SLC26A4 gene in 6 families with simple vestibular aqueduct enlargement (no goiter, no Mondini malformation), and found that 4 patients were homozygous or compound heterozygous mutations of the SLC26A4 gene, and believed that the SLC26A4 gene was the same Can result in simple enlargement of the vestibular aqueduct. In 2001, Campbell found SL...

Claims

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Application Information

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IPC IPC(8): C12Q1/6883
CPCC12Q1/6883C12Q2600/156
Inventor 查定军梁鹏飞陈俊王淑娟李琼李薇
Owner FOURTH MILITARY MEDICAL UNIVERSITY
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