A group of oligonucleotide aptamers that specifically recognize Bacillus cereus

A technology of Bacillus cereus and Bacillus cereus, which is applied in the field of food safety biology, can solve the problems of being easily affected by operating conditions, complex processes, and poor antibody stability, and achieves short screening cycles, convenient synthesis, and stable properties. Effect

Active Publication Date: 2017-05-10
JIANGNAN UNIV
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  • Abstract
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  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

Traditional bacterial culture and biochemical identification are cumbersome and time-consuming; molecular biology detection methods such as PCR methods are fast and accurate, but their influencing factors are complex and easily affected by operating conditions, with poor repeatability and specificity cannot be guaranteed; Chemical detection has the characteristics of strong specificity, accuracy and sensitivity, but the process of preparing specific antibodies is complicated and time-consuming, and the prepared antibodies have poor stability and are easily affected by environmental factors such as temperature

Method used

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  • A group of oligonucleotide aptamers that specifically recognize Bacillus cereus
  • A group of oligonucleotide aptamers that specifically recognize Bacillus cereus
  • A group of oligonucleotide aptamers that specifically recognize Bacillus cereus

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Embodiment Construction

[0016] The following is the application of cell-selex technology to screen high-specificity, high-affinity Bacillus cereus nucleic acid aptamers and its rapid detection of Bacillus cereus.

[0017] 1. Synthesize random single-stranded DNA library and primers (synthesized by IDT)

[0018] Random single-stranded DNA library: 5′-AGCAGCACAGAGGTCAGATG-N40-CCTATGCGTGCTACCGT GAA-3′, a random ssDNA library with a length of 80 nt was constructed, with fixed primer sequences at both ends and a random sequence of 40 bases in the middle, with a library capacity of 10 14 Above; upstream primer: 5′-AGCAGCACAGAGGTCAGATG-3′; 5′-phosphorylated downstream primer: 5′-(phosphate)-TTCACGGTAGCACGCATAGG-3′, the random ssDNA library and two primers were prepared with TE buffer to 100 μmol / Store L stock solution at -20°C for future use.

[0019] 2. Acquisition and processing of Bacillus cereus used in screening

[0020] Bacillus cereus was cultured in LB liquid medium and cultured overnight at 30°C...

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Abstract

The invention discloses an oligonucleotide aptamer set (Sp15, Sp16) for specifically identifying Bacillus cereus, belonging to the fields of food sanitation and clinical medicine detection. In order to overcome the defect of no Bacillus cereus nucleotide aptamer in the prior art, a competitive Cell-SELEX technique is utilized to perform screening, amplification, enzyme digestion, sequencing and affinity and specificity analysis on the in-vitro synthetic random single-chain oligonucleotide library by using a complete active Bacillus cereus cell as the target, thereby obtaining the oligonucleotide aptamer set for specifically identifying Bacillus cereus. The screened aptamers have the characteristics of high affinity, high specificity, stable properties, low cost and the like, are convenient for in-vitro synthesis, can be used for detecting Bacillus cereus in the food and environment by marking the functional group or fluorescent dye, and provide a new option for the antibody-dependent detection method at present.

Description

technical field [0001] The invention relates to the field of food safety biotechnology, in particular to screening an oligonucleotide with high specificity and high affinity for Bacillus cereus using the SELEX technology (exponentially enriched ligand system evolution technology) in molecular biology technology The acid aptamer provides scientific basis and theoretical basis for the application of the nucleic acid aptamer in detecting Bacillus cereus. Background technique [0002] Bacillus cereus is a food-borne pathogen widely distributed in nature. It often exists in soil, dust and sewage, plants and various raw and cooked foods containing more starch. It has been removed from including The bacterium has been isolated from a variety of foods including meat, dairy products, vegetables, fish, potatoes, soy sauce, pudding, fried rice, and various desserts. The report of Bacillus cereus as a food-borne pathogenic bacterium is relatively rare. There are many, and the detection r...

Claims

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Application Information

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Patent Type & Authority Patents(China)
IPC IPC(8): C12Q1/68C12Q1/04C12N15/115C12R1/085
Inventor 王周平杨慧慧夏雨段诺
Owner JIANGNAN UNIV
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