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Primer composition, kit and method for detecting the expression level of insulin-like peptide ilp series genes in Drosophila melanogaster

A technology of gene expression level and primer composition, which is applied in biochemical equipment and methods, recombinant DNA technology, and microbial determination/inspection, etc., can solve the problems of inaccurate quantification, low sensitivity, high technical cost, etc., and save production. Cost and detection cost, good sensitivity and specificity, avoid low specificity effects

Active Publication Date: 2020-04-21
HANGZHOU DIANZI UNIV
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

The advantages of fluorescent quantitative PCR technology: high sensitivity and accurate quantification, but there are also the following disadvantages: 1) low throughput: if only one fluorescent marker is used, only one gene can be detected at a time
When a sample needs to detect multiple genes at the same time, it must be tested one by one, the cost is relatively high, the efficiency is low, the cycle is long, and it is impossible to start with a large number of samples
2) The cost is relatively high: if multiple genes need to be detected at the same time, multiple fluorescent markers are required; at present, a maximum of 4 to 5 fluorescent markers are used in common to mark each gene segment to be detected, so multiple fluorescent markers are used relatively high cost
[0006] (2) The fluorescent in situ hybridization method is to hybridize fluorescently labeled gene probes to intracellular nucleic acids in situ, and detect the brightness and quantitative gene expression levels through a fluorescent microscope, which has the disadvantages of low throughput, low sensitivity, and high cost
It has the advantages of high throughput, but the technology is expensive and complicated, and the synthesis and fixation of probes are complicated, and it cannot be accurately quantified, with poor repeatability and low sensitivity.
[0008] (4) As a relatively new technology, RNA sequencing has the advantages of high sensitivity and high throughput, but it is expensive

Method used

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  • Primer composition, kit and method for detecting the expression level of insulin-like peptide ilp series genes in Drosophila melanogaster
  • Primer composition, kit and method for detecting the expression level of insulin-like peptide ilp series genes in Drosophila melanogaster
  • Primer composition, kit and method for detecting the expression level of insulin-like peptide ilp series genes in Drosophila melanogaster

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0041] The invention is a kit for detecting the expression level of insulin-like peptide ILP series genes in Drosophila melanogaster. The kit includes the following reagents:

[0042] 1) DEPC water

[0043] 2) 5×RT buffer

[0044] 3) RT primer mix

[0045] 4) RT enzyme (full name reverse transcriptase)

[0046] 5) Solution Z

[0047] 6) 10×PCR buffer

[0048] 7) PCR primers

[0049] 8) 25mM magnesium chloride solution

[0050] 9) DNA polymerase

[0051] 10) Positive control

[0052] The above-mentioned reverse transcription primers include the RT amplification primers of 7 kinds of insulin-like peptides and RNA internal reference in Table 1 and Table 2, and the PCR primers include the PCR amplification primers of 7 kinds of insulin-like peptides and RNA internal reference in Table 1 and Table 2. The primers and gene sequences are shown in Table 2 below.

[0053] The above Z solution includes deoxynucleotide triphosphates (dNTPs) and universal primers. The sequence of ...

Embodiment 2

[0065] The present invention is a kit for detecting the expression level of insulin-like peptide ILP series genes in Drosophila melanogaster, the detected genes include insulin-like peptide 1, insulin-like peptide 2, insulin-like peptide 3 and insulin-like peptide 4 in Drosophila melanogaster , insulin-like peptide 5, insulin-like peptide 6, insulin-like peptide 7 (see Table 1). Drosophila melanogaster samples were collected, nucleic acid was extracted, reverse transcription and PCR reactions were performed using the sample nucleic acid as a template, and finally the sample was separated by capillary electrophoresis. The specific steps were as follows:

[0066] 1. Production of a kit for detecting the gene expression level of the insulin-like peptide ILP series in Drosophila melanogaster based on the GeXP multiple gene expression genetic analysis system. The components included in the kit are the same as those in Example 1 above;

[0067] 2. Collect samples and extract nucleic...

Embodiment 3

[0096] Embodiment 3: detection kit sensitivity, specificity analysis

[0097]Sensitivity analysis: After diluting the positive control according to a certain copy number ratio, PCR amplification and capillary electrophoresis detection until no signal is detected, the copy number is the lowest detection line, which is the sensitivity of the kit. Sensitivity up to 45 copies.

[0098] Specificity analysis: Single-plex PCR amplification is detected as a single peak of the target fragment size by capillary electrophoresis.

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Abstract

The invention discloses a primer composition, a kit and a use method for detecting the expression level of insulin-like peptide ILP series genes in Drosophila melanogaster. The primer composition comprises RT amplification primers and PCR amplification primers of insulin-like peptide and RNA internal reference. The kit includes DEPC water, 5×RT buffer, reverse transcription primer, reverse transcriptase, Z solution, 10×PCR buffer, PCR primer, 25mM magnesium chloride solution, DNA polymerase and positive control. The present invention can detect 7 insulin-like peptides of Drosophila melanogaster at the same time, and can complete the detection of 192 samples in one day, which not only saves production and detection costs, but also improves detection efficiency; the RNA internal reference provides a control internal reference for the integrity of the sample RNA, Ensure the judgment of sample quality during the inspection process, avoid false negatives, and make the detection have better sensitivity and specificity, thereby avoiding the problem of low specificity of other detection methods.

Description

technical field [0001] The invention relates to a multiple gene detection kit and its application, in particular to a primer composition, a kit and a use method for detecting the expression level of insulin-like peptide ILP series genes in Drosophila melanogaster. Background technique [0002] In humans and mammals, insulin is an important hormone secreted by the beta cells of the pancreas. Insulin is the only hormone that lowers blood sugar in the body, and it is also the only hormone that simultaneously promotes the synthesis of glycogen, fat, and protein. Insulin can also promote the entry of potassium ions and magnesium ions through the cell membrane into the cell; and promote the synthesis of deoxyribonucleic acid (DNA), ribonucleic acid (RNA) and adenosine triphosphate (ATP). Due to the important role of insulin in metabolic regulation, the role of insulin signaling pathway in various physiological and pathological processes (eg, cancer, aging) has received increasing...

Claims

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Application Information

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Patent Type & Authority Patents(China)
IPC IPC(8): C12Q1/6888C12N15/11
CPCC12Q1/6851C12Q1/6888C12Q2600/158C12Q2600/16C12Q2521/107C12Q2531/113C12Q2537/143C12Q2545/101C12Q2563/107C12Q2565/125
Inventor 沈洁
Owner HANGZHOU DIANZI UNIV
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