Kit for integrated detection of alpha and beta mutant type thalassemias
A technology of thalassemia and kits, which is applied in the determination/testing of microorganisms, biochemical equipment and methods, etc., and can solve problems such as inability to effectively distinguish, inability to detect mutations, and difficulty in commercialization
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Embodiment 1
[0049] The preparation of embodiment 1 sample target nucleic acid
[0050] 1) EDTA anticoagulated whole blood collected from 6 clinical cases, and gently invert the glass tube to mix 5-10 times.
[0051] 2) Take a 1.5ml clean centrifuge tube and mark the tube cap with a Mark pen. Add 300 μl of anticoagulated whole blood into a centrifuge tube, add 1ml of sterilized double distilled water, mix well, and place at room temperature for 3 minutes.
[0052] 3) Centrifuge at 3000 rpm for 5 minutes at room temperature. Discard the supernatant and keep the maroon precipitate.
[0053] 4) Repeat the above steps once. Remove as much residual liquid as possible.
[0054] 5) Add DNA extraction solution (5% Chelex-100, 0.25ug / mL proteinase K) and mix well. Water bath at 100°C for 10 minutes, centrifuge at 10,000 rpm for 5 minutes, and store at -20°C for later use.
Embodiment 2
[0055] The PCR amplification of embodiment 2 target nucleic acid
[0056] PCR reagents were prepared using hot start enzyme or Taq enzyme, in which Taq enzyme was produced by NEB Company, hot start enzyme was produced by Fermentas, 10×hot start PCR buffer and Taq 5×Master Mix were also commercially available. Preparation of reaction system as follows:
[0057]
[0058]
[0059]To the PCR reaction reagents, directly add 2 μl of the extracted DNA template, centrifuge briefly (3 seconds), and put each reaction tube into a PCR instrument. The amplification conditions of the PCR reagent with hot start enzyme are: 95°C for 15min, then 94°C for 30s, 68°C for 90s, run 5 cycles, then 94°C for 30s, 55°C for 45s, 72°C for 60s, run for 40 cycles, and finally 72°C for 7min.
[0060] The PCR reagent amplification conditions with Taq enzyme added are: 94°C for 5min, then 94°C for 30s, 68°C for 90s, run 5 cycles, then 94°C for 30s, 55°C for 45s, 72°C for 60s, run for 40 cycles, and fi...
Embodiment 3
[0062] The preparation of embodiment 3 low-density chips
[0063] The low-density chip carrier is a nylon membrane, and the membrane strip needs to be fully diluted with 10% EDC-HCl (1-(3-dimethylaminopropyl)-3-ethylcarbodiimide hydrochloride, Sigma Company) solution before use. Soak and activate for 60 minutes, wash with pure water twice, 3 minutes each time, and then dry at room temperature. Centrifuge the freeze-dried powder of the probe at 12000rpm for 5 minutes, then dissolve it in sterilized pure water to 10μM, and then apply 0.5μl per hole directly on the appropriate position of the membrane strip in a fixed format, see attached image 3 .
[0064] After spotting the sample, let it stand at room temperature for 2 hours, treat the membrane strip with 0.1M NaOH solution for 10 minutes, wash it thoroughly with distilled water, dry it at room temperature and store it at 4°C for later use.
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