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Primer and probe composition for detecting SLCO1B1 and APOE (apolipoprotein E) gene polymorphism and kit and method

A gene polymorphism and composition technology, which is applied in the field of primers and probe compositions for detecting SLCO1B1 and APOE gene polymorphisms, can solve problems such as difficult popularization, high cost, and slow speed, and meet the needs of clinical diagnosis , easy operation, fast effect

Inactive Publication Date: 2020-05-15
深圳会众生物技术有限公司
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

Main disadvantages: low sensitivity; special requirements for reagents and instruments, not easy to popularize; complicated operation, relatively high cost, slow speed and low throughput
[0016] The fluorescent PCR technology used in the above kits is the conventional fluorescent PCR method. One channel can only detect one mutation, and multiple genes need to be detected separately, which has problems such as low detection throughput and cumbersome operation; while the PCR-gene chip method, Although the detection throughput is high, there are problems such as long operation time, many steps and easy contamination
Neither of these two methods can meet the requirements of high clinical diagnostic throughput and simple and fast operation, and cannot be applied on a large scale.

Method used

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  • Primer and probe composition for detecting SLCO1B1 and APOE (apolipoprotein E) gene polymorphism and kit and method
  • Primer and probe composition for detecting SLCO1B1 and APOE (apolipoprotein E) gene polymorphism and kit and method
  • Primer and probe composition for detecting SLCO1B1 and APOE (apolipoprotein E) gene polymorphism and kit and method

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0084] The detection situation of kit of the present invention to clinical sample

[0085] Use the kit of the present invention to detect 300 clinical samples, and the test results of the kit of the present invention to detect the clinical samples are shown in Table 6 below.

[0086] Table 6

[0087] genotype Quantity (example) SLCO1B1, 388A>G heterozygous 21 SLCO1B1, homozygous for 388A>G 8 SLCO1B1, 521T>C heterozygous 24 SLCO1B1, 521T>C homozygous 11 APOE, 388T>C heterozygous 29 APOE, 388T>C homozygous 9 APOE, heterozygous for 526C>T site 33 APOE, 526C>T site homozygous 5 normal 160

[0088] The kit of the present invention compares the detection results of 300 clinical samples with the gold standard sequencing results. The positive coincidence rate and negative coincidence rate are both 100%, and the accuracy rate reaches 100%. Table 7.

[0089] Table 7

[0090]

[0091] Note: Positive in the gold s...

Embodiment 2

[0105] Clinical application of kit of the present invention

[0106] 1. Intended use

[0107] This kit is used for the qualitative detection of human whole blood genomic DNA samples in vitro, and can detect 2 genes and 4 loci for individualized statin drug use, as shown in Table 8 below:

[0108] Table 8

[0109] site aisle SLCO1B1c.388A>G, rs2306283) FAM SLCO1B1 (c.521T>C, rs4149056) FAM APOE (c.388T>C, rs429358) VIC APOE (c.526C>T, rs7412) VIC

[0110] 2. Inspection principle

[0111] This kit product adopts improved fluorescent PCR probe melting curve technology.

[0112] Design specific PCR primers to amplify a DNA fragment of a certain length, which contains the polymorphic site to be detected.

[0113] The detection process is to use asymmetric PCR to amplify and enrich the single-stranded target sequence, so that the probe can hybridize with the target sequence during the melting curve analysis process. The specific implem...

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Abstract

The invention relates to a primer and probe composition for detecting SLCO1B1 and APOE (apolipoprotein E) gene polymorphism and a kit and a method. The primer and probe composition for detecting SLCO1B1 and APOE gene polymorphism comprises a first primer and a first probe and a second primer and a second probe, wherein the first primer and the first probe are used for detecting an SLCO1B1 locus; the second primer and the second probe are used for detecting an APOE locus; nucleotide sequences of the first primer are shown in SEQ ID No.1-4; nucleotide sequences of the first probe are shown in SEQ ID No.9-10; nucleotide sequences of the second primer are shown in SEQ ID No.5-8; and nucleotide sequences of the second probe are shown in SEQ ID No.11-12. The primer and probe composition has theadvantages of being high in detection flux and simple and convenient to operate.

Description

technical field [0001] The invention relates to gene detection technology, in particular to a primer and probe composition, kit and method for detecting SLCO1B1 and APOE gene polymorphisms. Background technique [0002] According to my country's epidemiological survey, the overall prevalence of dyslipidemia in Chinese adults was as high as 40.4% in 2012, which was a substantial increase compared with 10 years ago, and the increase in serum total cholesterol (TC) levels will lead to cardiovascular events in China in the future An increase of about 9.2 million. Dyslipidemia characterized by elevated low-density lipoprotein cholesterol (LDL-C) or TC is an important risk factor for atherosclerotic cardiovascular disease (ASCVD), so reducing LDL-C levels can significantly reduce the incidence of ASCVD and Danger of death. For every 1mmol / L (38mg / dL) reduction in LDL-C, the risk of major cardiovascular events can be reduced by 20%, and the risk of all-cause mortality can be reduc...

Claims

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Application Information

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IPC IPC(8): C12Q1/6883C12Q1/6858C12N15/11
CPCC12Q1/6858C12Q1/6883C12Q2600/106C12Q2600/156C12Q2531/113C12Q2527/107C12Q2563/107
Inventor 刘福平刘晶晶郑建权
Owner 深圳会众生物技术有限公司
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