Automated isolation and chemical reaction(s) of nucleic acids
a nucleic acid and automatic technology, applied in biochemistry apparatus and processes, laboratories, instruments, etc., can solve the problems of further risk of contamination in the subsequent analysis of isolated nucleic acids, and achieve the effects of shortening the time for the assay, reducing the volume of the sample processing, and increasing efficiency
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[0088]This invention has adapted a manual sample preparation for converting nucleic acids into methylated nucleic acids within an automated sample preparation system for methylating nucleic acids. The manual method is currently available as a sample preparation part of a diagnostic kit for colorectal cancer offered by Epigenomics. An automated and a manual method for sample preparation for methylated nucleic acids were conducted side by side to illustrate the improvements in nucleic acid sample isolation integrated with bisulfite conversion of the isolated nucleic acid as described herein for the disclosed invention. Both methods obtained similar results indicating that the automated method for sample preparation for methylated nucleic acids can be an improved method to the manual method.
[0089]The comparison process included sample collection and handling. Both a manual method to prepare methylated nucleic acid from plasma and an automated system to prepare methylated nucleic acid f...
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[0097]I. Automated Sample Preparation System to Prepare Methylated Nucleic Acid from Plasma
[0098]The automated sample preparation system is performed on the AnaPrep device from BioChain. Reagent cartridges, reaction reservoirs, reaction, sample and converted nucleic acid tubes are additional consumables to be provided to the user.
[0099]A. Pre-fill reagent cartridges are available, built to order depending on the conversion reaction to be performed in an integrated manner following isolation of nucleic acid for a test sample.
[0100]Reagent Cartridge contents for isolation of nucleic acid from a sample are comparable in composition to the reagents within the AnaPrep Blood DNA Extraction Kit 200 or 1200 (BioChain, P / N Z1322001 or Z1322002, respectively), AnaPrep Bacterial DNA Extraction Kit (Z1322006), and AnaPrep FFPE DNA Extraction Kit (Z1322009) kits except as noted:[0101]1. Ethanol[0102]2. Tip Wash Buffer[0103]3. Wash A Buffer[0104]4. Magnetic Beads[0105]5. Lysis buffer[0106]6. Lysi...
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