A data difference analysis method and system based on probability density estimation

A technology of probability density and analysis method, applied in the field of data difference analysis method and system based on probability density estimation, which can solve the problems of data distribution limitation and lack of statistical significance

Active Publication Date: 2021-06-11
HUAZHONG UNIV OF SCI & TECH
View PDF3 Cites 0 Cited by
  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0003] The invention solves the technical problem that the data difference analysis method in the prior art is not only limited by data distribution, but also lacks statistical significance

Method used

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
View more

Image

Smart Image Click on the blue labels to locate them in the text.
Viewing Examples
Smart Image
  • A data difference analysis method and system based on probability density estimation
  • A data difference analysis method and system based on probability density estimation
  • A data difference analysis method and system based on probability density estimation

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0026] We applied the inventive method to predict mutations that significantly affect existing succinylation sites. This facilitates the discovery of genes that affect cancer through altered succinylation networks and provides insights into disease biology and therapeutic development. In the analysis of the effect of mutations on succinylation, we integrated 1,779,214 missense mutations from 11,659 tumor samples of 33 major cancer types / subtypes from the cancer gene database The Cancer Genome Atlas (TCGA). Among them, 63693 missense mutations (KsuMs) occurred around the lysine site (10 amino acids on the left and right sides). Such as figure 1 As shown, we used the succinylation site prediction platform to obtain probability scores for 63,693 peptides containing KsuMs, and the probability scores reflected the degree of succinylation at this site. Then, use the Parzen window method based on the Gaussian kernel to estimate the joint probability density of the Bayesian posterio...

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
Login to View More

PUM

No PUM Login to View More

Abstract

The invention discloses a data difference analysis method and system based on probability density estimation, belonging to the field of data analysis. The method is to establish a data set first, and the data in the data set have changed; then use the probability density estimation method to estimate the joint probability of the data before and after the change; select the optimal window width according to the maximum likelihood method, for different window widths, Take any point in the data set each time, use the remaining points in the data set to construct the joint probability distribution, calculate the joint probability density value of the arbitrary point on the joint probability distribution, and obtain the joint probability density value of multiple joint probability density values The product is the likelihood value, and the window width with the largest likelihood value is the optimal window width; according to the optimal window width, the joint probability density distribution of the data before and after the change is obtained by the probability density estimation method, and the difference of the data is analyzed. This method can obtain the significance degree of each data without being limited by the data distribution, and is used to find significantly changed data.

Description

technical field [0001] The present invention relates to the field of data analysis, and more specifically, to a data difference analysis method and system based on probability density estimation. Background technique [0002] Data that changes significantly are often critical. For example, through protein mass spectrometry, we can obtain the expression levels of each protein in the experimental group and the control group, and proteins with significant differences in expression may play a key regulatory role in this process. People often look for differential proteins based on the multiple of difference, and think that the protein with a larger multiple of change is more significantly different. However, in most cases, this assumption cannot be established. For example, if 1 becomes 2 and 10 becomes 20, the change is 2 times, but it does not mean that the difference is the same in significance. Another example is the amino acid mutation that affects the protein modificatio...

Claims

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
Login to View More

Application Information

Patent Timeline
no application Login to View More
Patent Type & AuthorityPatents(China)
IPC IPC(8): G06F16/2455G06F16/2458G16B20/50G16B35/00G16B40/00
CPCG06F16/24568G06F16/2462G06F16/2465G16B20/50G16B35/00G16B40/00
Inventor薛宇宁万山许浩东邓万锟郭亚萍
OwnerHUAZHONG UNIV OF SCI & TECH