System and method for identifying behavioral signatures

Abstract

Psychopharmacological properties of new therapeutic drugs and highly heritable behavior patterns of test subjects are identified based on analysis of monitored exploratory movement to identify behavioral signatures. A test subject in a pen is allowed to explore for a period of time, after injecting it with a candidate drug or control vehicle. The test subject's movement is monitored and its locations stored. The locations are analyzed to separate them into behavioral patterns that are defined based on combinations of behavioral feature. Relative frequencies of performing each behavioral pattern are determined. In each pattern, differences between the relative frequencies in the candidate drug and control groups are tested, and only patterns in which this difference is highly significant are retained. The number of behavioral patterns further is reduced based on the relative frequencies and the correlation of behavioral patterns to one another, with the cells left over corresponding to a set of endpoints that identify a behavioral signature of the effect of the drug.

Description

CROSS REFERENCE TO RELATED APPLICATION[0001]The current application claims priority under 35 U.S.C. §119 to the U.S. Provisional Patent Application Ser. No. 60 / 775,980, filed on Dec. 5, 2005, which in herein incorporated by reference in its entirety.GOVERNMENT LICENSE RIGHTS[0002]The U.S. Government has a paid-up license in this invention and the right in limited circumstances to require the patent owner to license others on reasonable terms as provided for by the terms of Grant No. DA-022407 awarded by NIH.FIELD OF INVENTION[0003]The present invention relates generally to statistically grouping data into patterns. More specifically, the present invention is directed to identifying behavioral signatures based on exploratory behavior that can be used in behavioral genetics or drug discovery applications.BACKGROUND OF THE INVENTION[0004]Animal models used in psychiatric drug discovery are often developed strictly for their predictive validity. The main purpose of such a model typicall...

AI Technical Summary

Benefits of technology

[0011]Accordingly, the present invention provides a paradigm for behavioral testing capable of effectively utilizing large amounts of data, which may be collected from various behavioral tests (e.g., open-field maze, the photobeam box, the plus maze and the water maze) and performed in various locations and by various people, and identifying statistically significant behavioral patterns. These behavioral patterns (endpoints) may then further be utilized to provide a behavioral signature for classifying drugs, drug discovery, disease diagnosis and / or the testing of therapeutics. In presently preferred exemplary embodiments of the present invention a system and method are provided for discovering the psychopharmacological properties of a drug, for studying new therapeutic drugs, and for identifying highly heritable behavior patterns. Based upon exploration (mining and analysis) of a raw database, exemplary embodiments of the present invention are capable of screening a very large number of potential behavioral endpoints and identifying those that maximize behavioral properties such as those set forth above. For example, in a presently preferred embodiment of the present invention, the constellation of such behavioral endpoints may be used for the development of a psychopharmacological ‘fingerprint’ or behavioral signature for known and novel psychoactive compounds. The ‘fingerprint’ may serve as a valuable tool in classifying known drugs and drug discovery and may lead to broadening of our understanding of the behavioral effects of drugs.

[0014]Embodiments of the present invention, on the other hand, code each path coordinate using a plurality of defined features in order to plot a corresponding endpoint within a cell of a feature space. The range of values in each feature is partitioned into one or more intervals, thus dividing the feature space into a large number (typically tens to hundreds of thousands) of “cells.” Each cell corresponds to a unique combination of features (i.e., a unique behavioral pattern). The effect of the candidate drug on the relative frequency of staying in each cell (i.e., of using this behavioral pattern) is then statistically tested. The very large number of behavioral patterns, identified as the plotted endpoints within the cells of the feature space, highly increases the likelihood that one or more of the patterns may be found to best capture the effect of a specific drug. Thus, the one or more of these pattern frequencies may serve as a set of endpoints that identifies the behavioral signature of the candidate drug.

Problems solved by technology

First, exploratory behavior is a complex behavior that is rich in behavioral information.

Third, the highly structured repertoires are defined in large part by complex ‘hard-wired’, highly heritable, mechanisms in the brain.

However these endpoints may be far from suitable for best capturing the behavioral effect of the candidate drug.