Biological sequence analysis platform and using method thereof

Abstract

The invention discloses a biological sequence analysis platform which comprises a computer, an input module, an analysis module and an output module, wherein the computer comprises a user interface; the input module is used for manually inputting a biological sequence to be analyzed on the user interface, or uploading a readable-format file recording the biological sequence; the analysis module is used for analyzing the biological sequence obtained by the input module to obtain an analysis result; and the output module is used for displaying the analysis result obtained by the analysis module on the user interface, and/or exporting and storing the analysis result in a pre-defined external file outside the biological sequence analysis platform. The biological sequence analysis platform disclosed by the invention has a simple interface, realizes one-stop analysis, and remarkably saves labor and material resources; meanwhile, by adding a batch processing module, the result visualization and storage are enhanced to facilitate the subsequent analysis and view; and in the analysis process, the powerful search algorithm is improved, and the corresponding analysis time is shortened.

Description

technical field [0001] The invention relates to the field of biotechnology, in particular to a biological sequence analysis platform and a method for using the same. Background technique [0002] Sequence analysis has a great demand in the field of molecular biology, and there are also a large number of related software (local / network services), such as Wisconsin software package (GCG)[1], DNAStar[2], WEB-THERMODYN[3] , ANTHEPROT[4], Omiga[5], SEALS[6], Seekit[7], etc., especially GCG and DNAStar are widely used, providing a large number of sequence analysis functions, such as repeat sequence search, motif search, sequence comparison Yes, evolutionary analysis, etc., but currently each software provides different functions, especially for local software, the different development platforms also bring great inconvenience to users, and users need to switch between different platforms At the same time, it is often necessary to convert the file format; especially in the field o...

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Problems solved by technology

[0002] Sequence analysis has a great demand in the field of molecular biology, and there are also a large number of related software (local / network services), such as Wisconsin software package (GCG)[1], DNAStar[2], WEB-THERMODYN[3] , ANTHEPROT[4], Omiga[5], SEALS[6], Seekit[7], etc., especially GCG and DNAStar are widely used, providing a large number of sequence analysis functions, such as repeat sequence search, motif search, sequence comparison Yes, evolutionary analysis, etc., but currently each software provides different functions, especially for local software, the different development platforms also bring great inconvenience to users, and users need to switch between different platforms At the same time, it is often necessary to convert the file format; especially in the field of biotechnology, relevant technicians need to perform sequence analysis on a large number of customer sequences and generate sequence analysis reports. If this analysis work only relies on existing platforms, it will cost a lot time and energy

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