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Marker combination, kit and application thereof for detection of early gastric cancer

A detection kit and technology for early gastric cancer, applied in the biological field, can solve the problem of signal-to-noise difference of microarray, and achieve the effect of improving accuracy, easy access, and strong clinical operability

Active Publication Date: 2021-08-03
苏州京脉生物科技有限公司
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

However, there are still some deficiencies in current research on circulating miRNAs as diagnostic markers for gastric cancer. For example, (1) a large part of research only selects miRNAs that have been reported to be dysregulated in gastric cancer tissues as candidate indicators, and these miRNAs are detected in serum is not necessarily the optimal choice, and (2) some studies have used microarray for preliminary screening of miRNA markers, but compared with next-generation sequencing, the signal-to-noise ratio of microarray is poor, so the miRNA markers screened out is not necessarily preferred

Method used

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  • Marker combination, kit and application thereof for detection of early gastric cancer
  • Marker combination, kit and application thereof for detection of early gastric cancer
  • Marker combination, kit and application thereof for detection of early gastric cancer

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0060] (13) Use the expression amount RPM obtained in step (12) as the level of the above-mentioned serum miRNA. Example 1: Determination of Serum miRNA Marker Combinations Using Training Set Samples

[0061] From March 2015 to February 2018, the inventor collected a total of 138 peripheral venous blood samples from patients with untreated early gastric cancer. Each sample contained 20ml of peripheral blood, including 91 males and 47 females. The distribution ranges from 31 to 78 years old; during the same period, the inventor collected 100 samples of peripheral venous blood from healthy people, each containing 20ml of peripheral blood, including 66 males and 34 females, with an age distribution of 32 to 78 years old; The two groups of samples met the principle of gender and age matching.

[0062] For each peripheral blood sample, the following methods were used for serum miRNA library preparation and sequencing data analysis to obtain serum miRNA levels:

[0063] (1) Periph...

Embodiment 2

[0081] Example 2: Validation of the effect of miRNA marker combinations using validation group 1 samples

[0082] From March 2018 to March 2019, the inventor collected a total of 61 peripheral venous blood samples from untreated patients with early gastric cancer. Each sample contained 20ml of peripheral blood, including 40 males and 21 females. The distribution was 32-76 years old; at the same time, the inventor collected 50 samples of peripheral venous blood from healthy people, each sample contained 20ml of peripheral blood, including 32 males and 18 females, and the age distribution was 32-77 years old; The two groups of samples met the principle of gender and age matching.

[0083] The serum miRNA marker combination established in the training set was used for early gastric cancer detection in validation set 1. Similarly, the method in Example 1 was used to prepare the library of serum miRNA and analyze the sequencing data, so as to obtain the level of serum miRNA. Logi...

Embodiment 3

[0084] Example 3: Validation of the effect of miRNA marker combinations using validation group 2 samples

[0085] From April 2019 to May 2020, the inventor collected 51 samples of peripheral venous blood from patients with untreated early gastric cancer. Each sample contained 20ml of peripheral blood, including 32 males and 19 females. The distribution is 33-79 years old; at the same time, the inventor collected 50 samples of peripheral venous blood from healthy people, each sample contained 20ml of peripheral blood, including 33 males and 17 females, and the age distribution was 34-77 years old; During the same period, the inventor collected a total of 62 samples of peripheral venous blood from patients with untreated gastric ulcer, each of which contained 20ml of peripheral blood, including 40 males and 22 females, with an age distribution of 34-78 years; The three groups of samples meet the principle of gender and age matching.

[0086] The serum miRNA marker combination e...

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Abstract

The present invention relates to a marker combination, kit and application for early gastric cancer detection, the early gastric cancer marker combination includes the following miRNAs detectable in human serum: hsa-miR-17-5p, hsa-miR-5p 18a‑5p, hsa‑miR‑19b‑3p, hsa‑miR‑20a‑5p, hsa‑miR‑21‑5p, hsa‑miR‑25‑5p, hsa‑miR‑27a‑5p, hsa‑miR‑29c‑ 5p, hsa‑miR‑93‑5p, hsa‑miR‑100‑5p, hsa‑miR‑103a‑3p, hsa‑miR‑106a‑5p, hsa‑miR‑106b‑5p, hsa‑miR‑148a‑5p, hsa‑miR‑183‑5p, hsa‑miR‑199a‑3p, hsa‑miR‑218‑5p, hsa‑miR‑222‑5p, hsa‑miR‑337‑3p, hsa‑miR‑365a‑3p, hsa‑miR‑218‑5p, hsa‑miR‑222‑5p, hsa‑miR‑337‑3p, hsa‑miR‑365a‑3p miR‑423‑5p, hsa‑miR‑425‑5p, hsa‑miR‑486‑5p, hsa‑miR‑487b‑3p, hsa‑miR‑532‑3p, hsa‑miR‑590‑5p, hsa‑miR‑ 615‑3p, hsa‑miR‑744‑5p. Compared with the existing miRNA marker combination, the miRNA marker combination obtained in the present invention covers a wider range of miRNAs and has a higher detection ability for early gastric cancer. The detection reliability has been independently verified by two verification groups, and based on two The experimental cost of generational sequencing is also within an acceptable range.

Description

technical field [0001] The invention relates to a marker combination, kit and application for early gastric cancer detection, and belongs to the field of biotechnology. Background technique [0002] Gastric cancer is one of the most common malignant tumors in the world, and it is also one of the malignant tumors with the highest mortality rate. According to statistics in recent years, in China, gastric cancer has long been one of the three major causes of death from various types of cancer. At present, significantly improved surgical techniques and various newly developed treatment methods have significantly improved the treatment effect and survival time of patients with early gastric cancer; however, the survival time of patients with advanced gastric cancer is still not optimistic. The five-year survival rate is far below 50%, and the high cost of long-term treatment has brought a heavy burden to the family and society. Therefore, early detection of gastric cancer is cr...

Claims

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Application Information

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Patent Type & Authority Patents(China)
IPC IPC(8): C12Q1/6886C12N15/113
CPCC12Q1/6886C12Q2600/158C12Q2600/178
Inventor 李华胡延平张蕊胡文献
Owner 苏州京脉生物科技有限公司
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